Last updated on 2026-02-17 03:50:25 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.71 | 253.67 | 267.38 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.13 | 223.18 | 234.31 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 29.00 | 296.78 | 325.78 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 31.00 | 341.80 | 372.80 | OK | |
| r-devel-macos-arm64 | 1.1.4 | 3.00 | 44.00 | 47.00 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 23.00 | 197.00 | 220.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.71 | 280.90 | 296.61 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 16.02 | 256.16 | 272.18 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 15.00 | 930.00 | 945.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 22.00 | 193.00 | 215.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 12.00 | 599.00 | 611.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 249.00 | 274.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [2m/13m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.607, system: 0.056, elapsed: 5.069 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.867, system: 0.147, elapsed: 29.856 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.229, system: 0.027, elapsed: 1.243 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.864, system: 2.185, elapsed: 180.151 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.013, elapsed: 0.745 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.417, system: 2.628, elapsed: 219.637 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.710, system: 0.099, elapsed: 6.854 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.060, system: 0.321, elapsed: 34.472 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.231, system: 0.035, elapsed: 1.583 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.001, system: 2.680, elapsed: 165.847 seconds]
Computing values for grid cells...
... done. [user: 0.195, system: 0.014, elapsed: 0.357 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.934, system: 3.699, elapsed: 213.210 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.788, system: 0.098, elapsed: 4.140 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.166, system: 0.263, elapsed: 25.574 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.362, system: 0.040, elapsed: 1.502 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.397, system: 2.751, elapsed: 137.514 seconds]
Computing values for grid cells...
... done. [user: 0.209, system: 0.024, elapsed: 0.628 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
2 1 3 4
... computing probabilities from permuted values ...
... done. [user: 1.439, system: 0.539, elapsed: 2.831 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 23.342, system: 4.572, elapsed: 176.657 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.704, system: 0.072, elapsed: 3.365 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.349, system: 0.286, elapsed: 17.538 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.225, system: 0.024, elapsed: 0.443 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.886, system: 1.670, elapsed: 94.347 seconds]
Computing values for grid cells...
... done. [user: 0.197, system: 0.015, elapsed: 0.515 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.126, system: 1.258, elapsed: 59.129 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 33.335, system: 3.608, elapsed: 177.491 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [117s/518s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.751, system: 0.091, elapsed: 6.672 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.229, system: 0.402, elapsed: 33.481 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.231, system: 0.037, elapsed: 1.366 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.008, system: 2.401, elapsed: 96.043 seconds]
Computing values for grid cells...
... done. [user: 0.205, system: 0.022, elapsed: 0.271 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.168, system: 3.441, elapsed: 141.439 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.915, system: 0.090, elapsed: 2.458 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.471, system: 0.406, elapsed: 19.479 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.263, system: 0.043, elapsed: 0.446 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.137, system: 1.003, elapsed: 64.372 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.006, elapsed: 0.505 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.717, system: 1.940, elapsed: 89.208 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.718, system: 0.064, elapsed: 6.150 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.416, system: 0.376, elapsed: 21.615 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.242, system: 0.042, elapsed: 1.268 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.423, system: 1.874, elapsed: 75.931 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.010, elapsed: 0.182 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
2 1 4 3
... computing probabilities from permuted values ...
... done. [user: 1.221, system: 0.351, elapsed: 1.796 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 23.197, system: 3.150, elapsed: 109.641 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.607, system: 0.057, elapsed: 3.041 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.534, system: 0.253, elapsed: 18.974 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.234, system: 0.035, elapsed: 1.404 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.973, system: 1.956, elapsed: 85.005 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.014, elapsed: 0.477 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.108, system: 1.360, elapsed: 47.056 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 33.458, system: 4.133, elapsed: 159.957 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64