Last updated on 2025-08-21 21:50:18 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.99 | 264.24 | 277.23 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.26 | 222.37 | 232.63 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 315.74 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 476.97 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 19.00 | 190.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.94 | 308.60 | 323.54 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 12.83 | 270.65 | 283.48 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 195.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 201.00 | 222.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 175.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 242.00 | 266.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/130s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.510, system: 0.043, elapsed: 2.509 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.224, system: 0.172, elapsed: 16.837 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.017, elapsed: 0.377 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.812, system: 0.241, elapsed: 6.997 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.006, elapsed: 0.298 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.479, system: 0.509, elapsed: 28.036 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.546, system: 0.066, elapsed: 2.879 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.107, system: 0.107, elapsed: 14.557 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.012, elapsed: 0.301 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.827, system: 0.162, elapsed: 6.861 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.002, elapsed: 0.265 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.370, system: 0.371, elapsed: 25.846 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.492, system: 0.031, elapsed: 2.373 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.174, system: 0.089, elapsed: 15.183 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.012, elapsed: 0.322 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.808, system: 0.183, elapsed: 6.231 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.003, elapsed: 0.311 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.171, system: 0.218, elapsed: 1.403 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.643, system: 0.559, elapsed: 26.957 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.458, system: 0.034, elapsed: 2.635 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.993, system: 0.065, elapsed: 14.683 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.011, elapsed: 0.302 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.723, system: 0.168, elapsed: 6.072 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.252 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.238, system: 0.442, elapsed: 16.599 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.457, system: 0.753, elapsed: 41.696 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/115s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.553, system: 0.046, elapsed: 2.290 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.981, system: 0.097, elapsed: 13.800 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.010, elapsed: 0.194 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.685, system: 0.200, elapsed: 4.273 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.004, elapsed: 0.264 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.113, system: 0.376, elapsed: 21.538 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.572, system: 0.037, elapsed: 2.901 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.099, system: 0.104, elapsed: 13.062 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.013, elapsed: 0.216 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.714, system: 0.160, elapsed: 5.087 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.003, elapsed: 0.235 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.293, system: 0.341, elapsed: 22.364 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.575, system: 0.037, elapsed: 2.259 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.047, system: 0.074, elapsed: 14.203 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.010, elapsed: 0.281 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.534, system: 0.155, elapsed: 5.293 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.014, elapsed: 0.288 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.076, system: 0.232, elapsed: 1.105 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.223, system: 0.556, elapsed: 24.469 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.530, system: 0.037, elapsed: 2.741 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.224, system: 0.088, elapsed: 16.252 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.011, elapsed: 0.333 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.543, system: 0.163, elapsed: 4.591 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.005, elapsed: 0.191 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.040, system: 0.442, elapsed: 13.906 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.340, system: 0.774, elapsed: 38.962 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64