CRAN Package Check Results for Maintainer ‘Patrice Godard <patrice.godard at gmail.com>’

Last updated on 2025-10-21 17:50:33 CEST.

Package NOTE OK
BED 2 11
bscui 13
ClickHouseHTTP 13
neo2R 13
ReDaMoR 2 11
TKCat 2 11

Package BED

Current CRAN status: NOTE: 2, OK: 11

Version: 1.6.2
Check: HTML version of manual
Result: NOTE Found the following HTML validation problems: dumpEnsCore.html:74:1 (dumpEnsCore.Rd:28): Warning: missing </ul> before </div> dumpNcbiDb.html:74:1 (dumpNcbiDb.Rd:28): Warning: missing </ul> before </div> dumpNcbiTax.html:68:1 (dumpNcbiTax.Rd:24): Warning: missing </ul> before </div> dumpUniprotDb.html:75:1 (dumpUniprotDb.Rd:29): Warning: missing </ul> before </div> filterByBEID.html:54:1 (filterByBEID.Rd:14): Warning: missing </ul> before </div> getEnsemblGeneIds.html:75:1 (getEnsemblGeneIds.Rd:27): Warning: missing </ul> before </div> getEnsemblPeptideIds.html:69:1 (getEnsemblPeptideIds.Rd:23): Warning: missing </ul> before </div> getEnsemblTranscriptIds.html:69:1 (getEnsemblTranscriptIds.Rd:23): Warning: missing </ul> before </div> getNcbiGeneTransPep.html:60:1 (getNcbiGeneTransPep.Rd:18): Warning: missing </ul> before </div> getUniprot.html:60:1 (getUniprot.Rd:18): Warning: missing </ul> before </div> loadBE.html:81:1 (loadBE.Rd:33): Warning: missing </ul> before </div> loadBENames.html:56:1 (loadBENames.Rd:16): Warning: missing </ul> before </div> loadBESymbols.html:56:1 (loadBESymbols.Rd:16): Warning: missing </ul> before </div> loadBEVersion.html:65:1 (loadBEVersion.Rd:21): Warning: missing </ul> before </div> loadBeAttribute.html:59:1 (loadBeAttribute.Rd:17): Warning: missing </ul> before </div> loadCodesFor.html:55:1 (loadCodesFor.Rd:15): Warning: missing </ul> before </div> loadCorrespondsTo.html:59:1 (loadCorrespondsTo.Rd:17): Warning: missing </ul> before </div> loadHistory.html:55:1 (loadHistory.Rd:15): Warning: missing </ul> before </div> loadIsExpressedAs.html:57:1 (loadIsExpressedAs.Rd:17): Warning: missing </ul> before </div> loadIsHomologOf.html:59:1 (loadIsHomologOf.Rd:17): Warning: missing </ul> before </div> loadIsTranslatedIn.html:57:1 (loadIsTranslatedIn.Rd:17): Warning: missing </ul> before </div> loadNCBIEntrezGOFunctions.html:60:1 (loadNCBIEntrezGOFunctions.Rd:18): Warning: missing </ul> before </div> loadNcbiTax.html:58:1 (loadNcbiTax.Rd:16): Warning: missing </ul> before </div> loadOrganisms.html:47:1 (loadOrganisms.Rd:11): Warning: missing </ul> before </div> loadPlf.html:54:1 (loadPlf.Rd:14): Warning: missing </ul> before </div> loadProbes.html:60:1 (loadProbes.Rd:18): Warning: missing </ul> before </div> metadata-set.html:51:1 (metadata-set.Rd:13): Warning: missing </ul> before </div> metadata.html:50:1 (metadata.Rd:12): Warning: missing </ul> before </div> registerBEDB.html:60:1 (registerBEDB.Rd:18): Warning: missing </ul> before </div> scope.html:50:1 (scope.Rd:12): Warning: missing </ul> before </div> setBedVersion.html:51:1 (setBedVersion.Rd:12): Warning: missing </ul> before </div> Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Package bscui

Current CRAN status: OK: 13

Package ClickHouseHTTP

Current CRAN status: OK: 13

Package neo2R

Current CRAN status: OK: 13

Package ReDaMoR

Current CRAN status: NOTE: 2, OK: 11

Version: 0.8.2
Check: HTML version of manual
Result: NOTE Found the following HTML validation problems: as_type.html:50:1 (as_type.Rd:12): Warning: missing </ul> before </div> check_types.html:46:1 (check_types.Rd:10): Warning: missing </ul> before </div> correct_constraints.html:46:1 (correct_constraints.Rd:10): Warning: missing </ul> before </div> modelToVn.html:65:1 (modelToVn.Rd:23): Warning: missing </ul> before </div> norm_type_ref.html:55:1 (norm_type_ref.Rd:15): Warning: missing </ul> before </div> recover_RelDataModel.html:49:1 (recover_RelDataModel.Rd:13): Warning: missing </ul> before </div> sub-.RelDataModel.html:61:1 (sub-.RelDataModel.Rd:18): Warning: missing </ul> before </div> view_confrontation_report.html:51:1 (view_confrontation_report.Rd:13): Warning: missing </ul> before </div> write_json_data_model.html:50:1 (write_json_data_model.Rd:12): Warning: missing </ul> before </div> Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Package TKCat

Current CRAN status: NOTE: 2, OK: 11

Version: 1.1.14
Check: HTML version of manual
Result: NOTE Found the following HTML validation problems: add_collection_member.html:62:1 (add_collection_member.Rd:20): Warning: missing </ul> before </div> manage_chTKCat_users.html:52:1 (manage_chTKCat_users.Rd:14): Warning: missing </ul> before </div> Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc