Changes to the Durga
package
Durga 2.1.0
Enhancements
DurgaPlot
takes a parameter ef.size.cex
that controls the size of the effect size central tendency symbol.
DurgaPlot
takes a parameter ef.size.ylim
that sets y-axis limits of the effect size plot. Cannot be specified if
the effect size plot is to the right and the effect type is “mean”,
because in that case the effect size y-axis must match the main plot
y-axis.
Bug fixes
DurgaBrackets
prevents bracket text from
overlapping.
DurgaDiff
now calculates CI of group mean for groups
with at least 3 values and 2 distinct values. Previously it was only
calculated for at least 3 distinct values.
DurgaDiff
now correctly handles R = NA
as
documented; does not calculate CIs
- Fix cross reference links in documentation.
Durga 2.0
Enhancements
DurgaDiff
can now calculate multiple different effect
sizes. The old values for effect.type
of
"cohens"
and "hedges"
are no longer accepted
and generate an error. This backwards-incompatible change has been made
so that users are required to consider the effect type they wish to use.
See the help file for DurgaDiff
for more information.
DurgaDiff
now calculates CI of group means using BCa
bootstrapping rather than using a parametric formula. This means that a
group with fewer than 3 distinct values will not have a CI calculated
(lower and upper limits will be NA
).
DurgaDiff
now accepts a vector for
group.col
. A single group column is created by
concatenating values from each specified group column.
DurgaDiff
now accepts data in either long or wide
format. Added the data set insulin.wide
as an example of
wide format.
Bug fixes
DurgaPlot
: Ensure entirety of effect size is visible
when on the right.
DurgaDiff
: bootstrap implementation of CI samples each
group separately. The bug sometimes meant that the effect size axis
disappeared in plots for groups with small sample sizes. The confidence
intervals will be slightly different now.
Durga 1.1.0
- Improvements to vignette and online help.
- Added argument
violin.params
to DurgaPlot
to provide additional control over violin appearance.
- Added arguments
ef.size.lty
and
ef.size.lwd
to DurgaPlot
to provide control
over effect size error bar appearance.
- Added argument
points.adjust
to DurgaPlot
to allow control over point layout.
- Bug fix in
DurgaPlot
: violin.fill = FALSE
now correctly does not fill violins, rather than white fill.
- Bug fix in
DurgaBrackets
; drawing many brackets
sometimes resulted in overlapping brackets.
- Extend tick marks on right axis to cover CI when plotting
standardised effect size on the right.
- Fixed bug in plotting violins for pathological data; previously
failed with error “Error in xy.coords(x, y, setLab = FALSE) : ‘x’ and
‘y’ lengths differ”
Durga 1.0