Corrected code that produced warning
length > 1 in coercion to logical
Update functions that use deprecated functions from
dplyr package
No longer export the following functions:
CalcGroupPIPs, CalcWithinGroupPIPs, and
CalcPIPs as these should typically be calculated using the
function ExtractPIPs
ComputePostmeanHnew.approx and
ComputePostmeanHnew.exact as these should typically be
calculated using the function ComputePostmeanHnew
set_verbose_opts as this is only called
internally
Expanded function documentation by adding example code
allowable values for starting parameter for r[m]
parameters updated as follows
no longer truncated to a single value (when
varsel = FALSE and
rmethod = "varying")
can be equal to 0 (when varsel = TRUE)
Error no longer generated if starting values for h.hat are not positive
When checking class of an object, use inherits()
instead of class()
Added ability to have binomial outcome family by
implementing probit regression within kmbayes()
Removed computation of the subject-specific effects
h[i] within kmbayes(), as this is not always
desired, and greatly slows down model fitting
This could still be done by setting the option
est.h = TRUE in the kmbayes function
posterior samples of h[i] can now be obtained via
the post-processing SamplePred function; alternatively,
posterior summaries (mean, variance) can be obtained via the
post-processing ComputePostmeanHnew function
Added ability to use exact estimates of the posterior mean and
variance by specifying the argument method = 'exact' within
the post-processing functions (e.g.,
OverallRiskSummaries(),
PredictorResponseUnivar())
PredictorResponseBivarLevels() when argument
both_pairs = TRUE (#4)