McCoy AG, Noel ZA, Sparks AH, Chilvers M (2019). “hagis, an R Package Resource for Pathotype Analysis of Phytophthora sojae Populations Causing Stem and Root Rot of Soybean.” Molecular Plant-Microbe Interactions, 32(12), 1574–1576. doi:10.1094/MPMI-07-19-0180-A, https://doi.org/10.1094/MPMI-07-19-0180-A.

McCoy AG, Noel ZA, Sparks AH, Chilvers MI (2025). hagis: Analysis of Plant Pathogen Pathotype Complexities, Distributions and Diversity. doi:10.5281/zenodo.2619820, R package version 4.0.0, https://openplantpathology.github.io/hagis/.

Corresponding BibTeX entries:

  @Article{,
    author = {Austin Glenn McCoy and Zachary A. Noel and Adam H. Sparks
      and Martin Chilvers},
    title = {{hagis}, an {R} Package Resource for Pathotype Analysis of
      {Phytophthora sojae} Populations Causing Stem and Root Rot of
      Soybean},
    journal = {Molecular Plant-Microbe Interactions},
    year = {2019},
    volume = {32},
    number = {12},
    pages = {1574–1576},
    month = {nov},
    doi = {10.1094/MPMI-07-19-0180-A},
    url = {https://doi.org/10.1094/MPMI-07-19-0180-A},
  }

  @Manual{,
    title = {{hagis}: Analysis of Plant Pathogen Pathotype
      Complexities, Distributions and Diversity},
    author = {Austin G. McCoy and Zachary A. Noel and Adam H. Sparks
      and Martin I Chilvers},
    year = {2025},
    note = {R package version 4.0.0},
    url = {https://openplantpathology.github.io/hagis/},
    doi = {10.5281/zenodo.2619820},
  }