Fitting Shared Atoms Nested Models via MCMC or Variational Bayes

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Documentation for package ‘sanba’ version 0.0.2

• DESCRIPTION file.
• Package NEWS.

Help Pages

compute_psm	Compute and Plot the Posterior Similarity Matrix
estimate_G	Estimate the Atoms and Weights of the Discrete Mixing Distributions
estimate_partition	Estimate the Observational and Distributional Partition
estimate_partition.SANmcmc	Estimate the Observational and Distributional Partition
estimate_partition.SANvi	Estimate the Observational and Distributional Partition
fit_CAM	Fit the Common Atoms Mixture Model
fit_fiSAN	Fit the Finite-Infinite Shared Atoms Mixture Model
fit_fSAN	Fit the Finite Shared Atoms Mixture Model
get_model	Accessor Functions for SAN Model Outputs
get_model.SANmcmc	Accessor Functions for SAN Model Outputs
get_model.SANvi	Accessor Functions for SAN Model Outputs
get_params	Accessor Functions for SAN Model Outputs
get_params.SANmcmc	Accessor Functions for SAN Model Outputs
get_params.SANvi	Accessor Functions for SAN Model Outputs
get_seed_best_run	Accessor Functions for SAN Model Outputs
get_seed_best_run.SANvi	Accessor Functions for SAN Model Outputs
get_sim	Accessor Functions for SAN Model Outputs
get_sim.SANmcmc	Accessor Functions for SAN Model Outputs
get_sim.SANvi	Accessor Functions for SAN Model Outputs
get_time	Accessor Functions for SAN Model Outputs
get_time.SANmcmc	Accessor Functions for SAN Model Outputs
get_time.SANvi	Accessor Functions for SAN Model Outputs
number_clusters	Estimate the Number of Observational and Distributional Clusters
plot.partition_mcmc	Estimate the Observational and Distributional Partition
plot.partition_vi	Estimate the Observational and Distributional Partition
plot.SANmcmc	Visual Check of the Convergence of the MCMC Output
plot.SANvi	Visual Check of the Convergence of the VI Output
plot.SANvi_G	Estimate the Atoms and Weights of the Discrete Mixing Distributions
plot_vi_allocation_prob	Plot Variational Cluster Allocation Probabilities
print.partition_mcmc	Estimate the Observational and Distributional Partition
print.partition_vi	Estimate the Observational and Distributional Partition
print.SANmcmc	Print the MCMC Output
print.SANvi	Print the Variational Inference Output
print.SANvi_G	Estimate the Atoms and Weights of the Discrete Mixing Distributions
summary.partition_mcmc	Estimate the Observational and Distributional Partition
summary.partition_vi	Estimate the Observational and Distributional Partition
summary.SANmcmc	Summarize the MCMC Output
summary.SANvi	Summarize the Variational Inference Output
summary.SANvi_G	Estimate the Atoms and Weights of the Discrete Mixing Distributions