# Exploratory Graph Analysis – a Framework for Estimating the Number of Dimensions in Multivariate Data using Network Psychometrics

## Documentation for package ‘EGAnet’ version 2.4.0

- DESCRIPTION file.
- Package NEWS.

## Help Pages

EGAnet-package | EGAnet-package
auto.correlate | Automatic correlations
boot.ergoInfo | Bootstrap Test for the Ergodicity Information Index
boot.wmt | 'bootEGA' Results of 'wmt2'Data
bootEGA | Bootstrap Exploratory Graph Analysis
CFA | CFA Fit of 'EGA' or 'hierEGA' Structure
color_palette_EGA | 'EGA' Color Palettes
community.compare | Compares Community Detection Solutions Using Permutation
community.consensus | Applies the Consensus Clustering Method (Louvain only)
community.detection | Apply a Community Detection Algorithm
community.homogenize | Homogenize Community Memberships
community.unidimensional | Approaches to Detect Unidimensional Communities
compare.EGA.plots | Visually Compare Two or More 'EGAnet' plots
convert2igraph | Convert networks to 'igraph'
convert2tidygraph | Convert networks to 'tidygraph'
cosine | Cosine similarity
depression | Depression Data
dimensionStability | Dimension Stability Statistics from 'bootEGA'
dnn.weights | Loadings Comparison Test Deep Learning Neural Network Weights
dynamic.network.compare | Compares Dynamic Network Structures Using Permutation
dynEGA | Dynamic Exploratory Graph Analysis
dynEGA.ind.pop | Intra- and Inter-individual 'dynEGA'
EBICglasso.qgraph | 'EBICglasso' from 'qgraph' 1.4.4
EGA | Exploratory Graph Analysis
EGA.estimate | Estimates 'EGA' for Multidimensional Structures
EGA.fit | 'EGA' Optimal Model Fit using the Total Entropy Fit Index ('tefi')
ega.wmt | 'EGA' Network of 'wmt2'Data
EGAnet | EGAnet-package
EGAnet-plot | S3 Plot Methods for 'EGAnet'
Embed | Time-delay Embedding
entropyFit | Entropy Fit Index
ergoInfo | Ergodicity Information Index
frobenius | Frobenius Norm (Similarity)
genTEFI | Generalized Total Entropy Fit Index using Von Neumman's entropy (Quantum Information Theory) for correlation matrices
glla | Generalized Local Linear Approximation
hierEGA | Hierarchical 'EGA'
igraph2matrix | Convert " network to matrix
infoCluster | Information Theoretic Mixture Clustering for 'dynEGA'
information | Information Theory Metrics
intelligenceBattery | Intelligence Data
invariance | Measurement Invariance of 'EGA' Structure
itemDiagnostics | Diagnostics Analysis for Low Stability Items
itemStability | Item Stability Statistics from 'bootEGA'
jsd | Jensen-Shannon Distance
known.graph | Re-fit Network
LCT | Loadings Comparison Test
modularity | Computes the (Signed) Modularity Statistic
net.loads | Network Loadings
net.scores | Network Scores
network.compare | Compares Network Structures Using Permutation
network.estimation | Apply a Network Estimation Method
network.fit | Traditional Fit Metrics for Networks
network.predictability | Predict New Data based on Network
network.regularization | Regularized Networks with Convex and Non-convex Penalties
optimism | Optimism Data
plot.EGAnet | S3 Plot Methods for 'EGAnet'
plot_clusters | Plot Clustered Individual Networks
polychoric.matrix | Computes Polychoric Correlations
prime.num | Prime Numbers through 100,000
riEGA | Random-Intercept 'EGA'
sim.dynEGA | sim.dynEGA Data
simDFM | Simulate data following a Dynamic Factor Model
simEGM | Simulate data following a Exploratory Graph Model ('EGM')
tefi | Total Entropy Fit Index using Von Neumman's entropy (Quantum Information Theory) for correlation matrices
tefi.compare | Compare Total Entropy Fit Index ('tefi') Between Two Structures
TMFG | Triangulated Maximally Filtered Graph
totalCor | Total Correlation
totalCorMat | Total Correlation Matrix
UVA | Unique Variable Analysis
vn.entropy | Entropy Fit Index using Von Neumman's entropy (Quantum Information Theory) for correlation matrices
wmt2 | WMT-2 Data
wto | Weighted Topological Overlap