Transforming and Harmonizing CHMS Variables

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Documentation for package ‘chmsflow’ version 0.1.0

• DESCRIPTION file
• User guides, package vignettes and other documentation
• Package NEWS
• Package README

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adjust_dbp	Adjusted diastolic blood pressure
adjust_sbp	Adjusted systolic blood pressure
aggregate_meds_by_person	Aggregate medication variables to one row per person
calculate_exercise_daily_avg	Average daily minutes of moderate-to-vigorous physical activity (MVPA) from accelerometer data
calculate_exercise_weekly	Weekly minutes of moderate-to-vigorous physical activity (MVPA) from daily average
calculate_fv_daily_cycles1to2	Daily fruit and vegetable consumption in a year - cycles 1-2
calculate_fv_daily_cycles3to6	Daily fruit and vegetable consumption in a year - cycles 3-6
calculate_gfr	Estimated glomerular filtration rate (GFR)
calculate_household_income	Adjusted total household income
calculate_nonhdl	Non-HDL cholesterol level
calculate_pack_years	Smoking pack-years
calculate_waist_height_ratio	Waist-to-height ratio (WHtR)
categorize_ckd	Chronic kidney disease (CKD) derived variable
categorize_diet_quality	Categorical diet indicator
categorize_exercise	Categorical weekly moderate-to-vigorous physical activity (MVPA) indicator
categorize_income_quintile	Categorical adjusted household income
categorize_nonhdl	Categorical non-HDL cholesterol level
cycle1	Canadian Health Measures Survey (CHMS) Cycle 1
cycle1_meds	Canadian Health Measures Survey (CHMS) Cycle 1 Medications
cycle2	Canadian Health Measures Survey (CHMS) Cycle 2
cycle2_meds	Canadian Health Measures Survey (CHMS) Cycle 2 Medications
cycle3	Canadian Health Measures Survey (CHMS) Cycle 3
cycle3_meds	Canadian Health Measures Survey (CHMS) Cycle 3 Medications
cycle4	Canadian Health Measures Survey (CHMS) Cycle 4
cycle4_meds	Canadian Health Measures Survey (CHMS) Cycle 4 Medications
cycle5	Canadian Health Measures Survey (CHMS) Cycle 5
cycle5_meds	Canadian Health Measures Survey (CHMS) Cycle 5 Medications
cycle6	Canadian Health Measures Survey (CHMS) Cycle 6
cycle6_meds	Canadian Health Measures Survey (CHMS) Cycle 6 Medications
derive_alcohol_risk	Low risk drinking score
derive_alcohol_risk_detailed	Low risk drinking score - former/never categories
derive_cvd_family_history	Cardiovascular Disease (CVD) family history
derive_cvd_personal_history	Cardiovascular disease (CVD) personal history
derive_diabetes_status	Diabetes derived variable
derive_hypertension	Hypertension derived variable
derive_hypertension_adj	Hypertension derived variable with adjusted blood pressures
derive_hypertension_control	Controlled hypertension derived variable
derive_hypertension_control_adj	Controlled hypertension derived variable with adjusted blood pressures
is_ace_inhibitor	ACE inhibitors
is_ace_med_cycles1to2	ACE inhibitors - cycles 1-2
is_any_antihtn_med	Any anti-hypertensive medications
is_any_htn_med_cycles1to2	Any anti-hypertensive medications - cycles 1-2
is_bb_med_cycles1to2	Beta blockers - cycles 1-2
is_beta_blocker	Beta blockers
is_calcium_channel_blocker	Calcium channel blockers
is_ccb_med_cycles1to2	Calcium channel blockers - cycles 1-2
is_diabetes_med	Diabetes medications
is_diab_med_cycles1to2	Diabetes medications - cycles 1-2
is_diuretic	Diuretics
is_diur_med_cycles1to2	Diuretics - cycles 1-2
is_lowest_income_quintile	Lowest income quintile indicator
is_misc_htn_med_cycles1to2	Other anti-hypertensive medications - cycles 1-2
is_nsaid	Non-steroidal anti-inflammatory drugs (NSAIDs)
is_nsaid_med_cycles1to2	Non-steroidal anti-inflammatory drugs (NSAIDs) - cycles 1-2
is_other_antihtn_med	Other anti-hypertensive medications
recode_after_meds	Recode variables that depend on derived medication variable inputs
recode_meds_cycles1to2	Recode medication variables for cycles 1-2 (wide format)
recode_meds_cycles3to6	Recode medication variables for cycles 3-6 (long format)
variables	variables.csv
variable_details	variable-details.csv