Analysis of Single-Cell Viral Growth Curves
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Documentation for package ‘sicegar’ version 0.3.0
Help Pages
| categorize | Categorize input data by comparing the AIC values of the three fitted models. |
| categorize_h0 | Categorize input data by comparing the AIC values of the three fitted models. |
| dataCheck | Checks if data is in correct format. |
| doublesigmoidalFitFormula | Double Sigmoidal Formula |
| doublesigmoidalFitFormula_h0 | Double Sigmoidal Formula with h0 |
| doublesigmoidalFitFunction | Double sigmoidal fit function with h0. |
| doublesigmoidalFitFunction_h0 | Double sigmoidal fit function with h0. |
| figureModelCurves | Generate model associated figures. |
| fitAndCategorize | Fit and categorize. |
| multipleFitFunction | multiple fit function. |
| multipleFitFunction_h0 | multiple fit function h0. |
| normalizeData | Normalization of given data |
| parameterCalculation | additional parameter calculation with help of fits |
| parameterCalculation_h0 | additional parameter calculation with help of fits |
| preCategorize | Checks for signal in the data. |
| sameSourceDataCheck | Check that data came from the same source. |
| sigmoidalFitFormula | sigmoidalFitFormula |
| sigmoidalFitFormula_h0 | sigmoidalFitFormula_h0 |
| sigmoidalFitFunction | Sigmoidal fit function |
| sigmoidalFitFunction_h0 | Sigmoidal fit function with h0 estimation |
| unnormalizeData | Unnormalization of given data |