d06269c9f08fb37f7a7efd24572f8749 *DESCRIPTION
403e52e143d01183efdfa4bb8e6d2fa8 *NAMESPACE
a28ba8fe63fac04034ab7dc29247dc2d *R/ACE_FPK.R
05e57e296ebdc86cfaee53aca3fe0691 *R/BBMV-internal.R
2cc65c6e5d3aaf9db84cb11d1021ee82 *R/ConvProp_bounds.R
cba90c3cfd11a9c48857e13615d54d08 *R/DiffMat_backwards.R
fb854528af27739972d337409811b64c *R/DiffMat_forward.R
d86010d14e4bd2feaad96f4074704fef *R/FPK_sim_traitgram.R
356a80e8fbe1dc67542d801e8f3d570f *R/FormatTree_bounds.R
b608e8b5414e58ca4a1acb78a9fab22d *R/LogLik_bounds.R
67c0c15045a61ca3ba34a9506f936ed7 *R/LogLik_bounds_est_root.R
cd19b5c52c97651d8bc729a7f78d5504 *R/MH_MCMC_FPK.R
02a9bbe6f9e8e2d649fab843782fb3dd *R/MH_MCMC_FPK_multiclades.R
11f94da9546612a3519071f7b82ce71c *R/Sim_FPK.R
a2390a2b783d12bfb60eef66055f3386 *R/Uncertainty_FPK.R
acb02133e5d75114b5ae6054f159f93a *R/VectorPos_bounds.R
9a1371e5f520097f12616222d558490d *R/add.ML.landscape.FPK.R
e236a6569eb88ad4181bb16e841a33a2 *R/charac_time.R
4ab7f61aa79b54922e44b17d5e443bb5 *R/find.mle_FPK.R
ad36e13636a5c8fc929e5fa7622dcd14 *R/find.mle_FPK_multiple_clades_same_V_different_sig2.R
ed54123b2609c2884def5cc0145214f0 *R/find.mle_FPK_multiple_clades_same_V_same_sig2.R
ad9f97ff87268266595179b7730d3fca *R/fit_BBMV_multiple_clades_different_V_different_sig2.R
6ff4010329223235832e42c5dad20899 *R/fit_FPK_multiple_clades_different_V_different_sig2.R
976c573f57487ccc9733b5dd266af178 *R/get.landscape.FPK.MCMC.R
fab07e82812c1612be24fb90c93e19b2 *R/get.landscape.FPK.R
568164af2435452c5133a3259d1cdb1b *R/lnL_BBMV.R
3524903d1250775587ee0ab4706b21a3 *R/lnL_FPK.R
ec48ce14cb8a613639f1110bef76a7a9 *R/lnl_BBMV_multiclades_same_V_different_sig2.R
a8746f0db3c4ceb48e986719d234bd53 *R/lnl_BBMV_multiclades_same_V_same_sig2.R
a5e7f35f8ff5bec2b1ba95372961f232 *R/lnl_FPK_multiclades_same_V_different_sig2.R
49f45ef5e407bfcdf76083089da95002 *R/lnl_FPK_multiclades_same_V_same_sig2.R
fc4cca0a990458d2b0b4ae2fc6b737b8 *R/log_prior_5pars_root_bounds.R
1f1e8658257daf6480f28920359548df *R/log_prior_nclades_plus_3_pars.R
51f557eafc3711cc6e7f99d928503648 *R/posterior_vs_prior.R
de0fe3ea2c86a4c5e754f7f978b4d72f *R/prep_mat_exp.R
91a4c89977a984e06bb462fe142c1f07 *R/proposal_5pars_root_bounds.R
a0204dec3ff5694e0687bb2f04f81245 *R/proposal_nclades_plus_3_pars.R
75aa9c1a391789d96e9a1d66a1480c2f *R/reformat_multiclade_results.R
425e392580ed2b34e7ed489a8de57be6 *R/trans_from_fixed.R
2abd7390fb3c3b55830eec1cfd4dcd84 *R/trans_to_fixed.R
48f03e132ad8c979a5d8b81aa5007ee9 *build/partial.rdb
33939a0d9ac071f19d250200eb5f0fd8 *man/ACE_FPK.Rd
2dbb61f6cc7f4d8d9dbadd4cb1fd6396 *man/BBMV-package.Rd
37fb5538d8e9254184f9e79325aaf4fe *man/ConvProp_bounds.Rd
38d319143ea63b3e7214a01b8b296f1b *man/DiffMat_backwards.Rd
8cac81ed4f21e23053bca3acd15483b7 *man/DiffMat_forward.Rd
f2e1ec839a2f1350dd68b7c0f957e72e *man/FPK_sim_traitgram.Rd
5bbd370903b881dad61e346ff35368ff *man/FormatTree_bounds.Rd
82fd53c37dc3ebedbcd563284571705d *man/LogLik_bounds.Rd
fa2b4c2f267f2e2cb4476fb16af27d71 *man/MH_MCMC_FPK.Rd
dde87c85584890eccb71f8162206b1d1 *man/MH_MCMC_FPK_multiclades.Rd
08c8705158a03f0f10df2b2fe0c5f7b9 *man/Sim_FPK.Rd
d5b787de55a5d6381c4946e697223652 *man/Uncertainty_FPK.Rd
cc2da7b5dc06307bb88e569f28cb7ea9 *man/VectorPos_bounds.Rd
4b9c42ca768e99e9d56bfa12793f1095 *man/charac_time.Rd
0f6a55164b156a88f501b3e73f3dce74 *man/find.mle_FPK.Rd
d550c343655336a6b19cc1ded9c519d8 *man/find.mle_FPK_multiple_clades_same_V_different_sig2.Rd
b9a3445a36dc4e21266f82078dc6d3f1 *man/fit_FPK_multiple_clades_different_V_different_sig2.Rd
3cf797939eca69f9fc288e1976ec64be *man/get.landscape.FPK.MCMC.Rd
a0c03f7b76d969e41a8372a30b057e34 *man/get.landscape.FPK.Rd
f80529bb9f3d7a2be921e24c81f4136d *man/lnL_FPK.Rd
f399371a98221a8fa945f4e6a1b366ee *man/lnl_FPK_multiclades_same_V_different_sig2.Rd
d02ccc3b7849b1c690f45c1dd1bb65de *man/log_prior_5pars_root_bounds.Rd
c1f170a488124e15811615ceb2065833 *man/log_prior_nclades_plus_3_pars.Rd
54892c254834d375b15223c10f0fa57f *man/posterior_vs_prior.Rd
ee55c56a2f1b2c177e434f034fb0cfd9 *man/prep_mat_exp.Rd
58f3753f9326692e6ff3bfa891b0e981 *man/proposal_5pars_root_bounds.Rd
5d64413f979520098c364938fd07a15a *man/proposal_nclades_plus_3_pars.Rd
46221848d151ccb5c68b13c0a7c2da60 *man/reformat_multiclade_results.Rd
a323fd186f8c1a4a3cf039ef951c47a4 *man/trans_from_fixed.Rd
