6b2a9628300671d0b09d5262052b3e19 *DESCRIPTION
754ef6dec33aba1bc272a0eca41a0d36 *NAMESPACE
40268a0bb118fb79d84e48442f23bf0c *NEWS
e6888aecdeef5dba44238c8b904a806a *R/A.R
ad794bf709c35f8f27618635e5dd2f2c *R/A_ExonPtnAlign_functions.R
4d1886d211d6ac855081e7be4fae5626 *R/A_support_functions.R
4a8d4d3985c91f851dbb24921bccd786 *R/A_wrapper.R
408806bf9e1f6053423cadd6913ed0e4 *R/BIGDAWG.R
19f51a0da94753d1ec06038371900563 *R/DRB_Parser.R
b6195ecbca5ebcc38b60543fc888581a *R/ErrLog.R
9a065c64b013b3af8c622c1597567ce1 *R/GL2TAB.R
d95e67c37e1960b1e6ba01756452fe91 *R/GLSconvert.R
20829e20d6c7d559ca73c767ac5e8cfc *R/HWE.R
7cd288d4102c0a294a8bb7f54c65e65b *R/HWE_support_functions.R
dce81896e9f6d1f402f3e19341fc712f *R/HWE_wrapper.R
4a004ecb8d955eddc39e02fb229b81d9 *R/H_MC.R
cc4d8268df0b98c2773417a5a0a3e99a *R/H_support_functions.R
fac37361a444aa1ded6c9f0813d68b30 *R/H_wrapper_MC.R
114723266a8c33efdc6aa0de9caa3271 *R/L.R
0fd904a810ccc26448fb05a1defb26a8 *R/L_wrapper.R
0779b9bfe369c4d8926b10d0e7f8db71 *R/TAB2GL.R
74660c0b7388ab3e573cc0850ba53efb *R/check_functions.R
cec0c1e989feb7af033fe6b396a61019 *R/data.R
c91a0fe0e7e6b8962d761b1790bb2690 *R/general_functions.R
adab18de297b67d7790d1064579df183 *R/stat_functions.R
a07a76a7c9d5c93af11898c51580c606 *R/sysdata.rda
c697d8b5bac3ba0d23a74ed58189accb *R/update_wrapper.R
3f7414f002b74de3a179300e0dd22626 *build/vignette.rds
fd7e4ffcef6968d908e37cf3726c37b7 *inst/doc/BIGDAWG.Rmd
c1c85d78350ba0eee60a3e69a2f523a5 *inst/doc/BIGDAWG.html
0b31359273377a51d18c4e5c6c5f9e22 *inst/doc/GLSconvert.Rmd
9a295a3a2f1f8af038dc5efffc65cb57 *inst/doc/GLSconvert.html
0e04205e8f01de5ea1b8de3605bd3082 *man/A.Rd
9cc0f7f27efe8e9ba81aae69150f58e1 *man/A.wrapper.Rd
3cb1ecb55c82d8e1eeef614d436a1133 *man/AA.df.check.Rd
422f646a3a8a7433b64a53e352d6aad3 *man/AAtable.builder.Rd
bc7348ea2194a34130aa2f1f9da6f4cc *man/AlignObj.Create.Rd
2d604131bf684fbd4e519c7078e6ed74 *man/AlignObj.Update.Rd
725914dc71aa2ac4c664f228a1f2e771 *man/AlignmentFilter.Rd
7650f701195256a00c90b7af01fda208 *man/Append.System.Rd
129019b8b27795d145e67d00b50a9971 *man/BIGDAWG.Rd
cc51e0cabf2aadbedaedd624b1423ba0 *man/Build.Matrix.Rd
c8deba3db6b7ecf6669ab0d85aa24198 *man/Check.Cores.Rd
5888a13995ab4ad146fcf0f29c2be14d *man/Check.Data.Rd
265fca04520c4c8b37872082dda571d7 *man/Check.Params.GLS.Rd
11b923ca510748c80364089430db1248 *man/Check.Params.Rd
0b805720a32989dbaf08c2bafc9f7fd5 *man/CheckAlleles.Rd
7e0a70ed8ee12d6f555e266a510abe37 *man/CheckHLA.Rd
a9460c4922e907c41110393aef189db3 *man/CheckLoci.Rd
c513116f791bbdf048b797da72c303c3 *man/CheckRelease.Rd
a59f7da32aef790bd7c814b9147dd98f *man/CheckString.Allele.Rd
7491ec587db7c78d8e0d0ad8b73d0ecb *man/CheckString.Locus.Rd
2b5a9df860b3df3498ac1e6c5c467ac6 *man/Create.Null.Table.Rd
5b8327ccb2d68eb27fc58e280a2a7df1 *man/DRB345.Check.Wrapper.Rd
af0d4ea970ee086da60b134f22cc431e *man/DRB345.Check.Zygosity.Rd
716f2e8429abfdace8ae14e73616eac2 *man/DRB345.Exp.Rd
02832852f6983ac2ea1c37bdf113c6e8 *man/DRB345.parser.Rd
d5d79f20592af6f1676ac8e2f564cce6 *man/EVSremoval.Rd
b1477597afe6e028f2995f6efaf8f95c *man/Err.Log.Rd
90b9bd3e74849656602a62a298e91207 *man/ExonPtnAlign.Create.Rd
aa44135ab81055df14676dfb7631de4a *man/ExonPtnList.Rd
126110f6ed72e5dfb79d100e40ca420a *man/Filler.Rd
5e1c54ceed4d54b939b3008c1ca77c19 *man/Format.Allele.Rd
0bb895dd64b750b3da6005be30e642ca *man/Format.Tab.Rd
98cc34051f7e3f8e96fed2c00427d60d *man/GL2Tab.Loci.Rd
7fd3bbd87beba5003af695ee1c465c9c *man/GL2Tab.Sub.Rd
a8d525cdba9c2fd2393f8d0faf7d4a02 *man/GL2Tab.wrapper.Rd
80ae6a94d05d665470a73ed54e8131d0 *man/GLSconvert.Rd
aa18f4b4e30ce31a059e11b42c626afe *man/GetField.Rd
c184db5a7fefe3d992d211fd86faf380 *man/GetFiles.Rd
2b830314b7c98fa6e074444dc30234ea *man/H.MC.Rd
af6c5135d317b1ce0899470c13a419e7 *man/H.MC.wrapper.Rd
c68af54c0436c31923924a7a6451c82b *man/HLA_data.Rd
b442487556f2c39a97c026ef100e9790 *man/HWE.ChiSq.Rd
90007f28342e412806a810b7f4301523 *man/HWE.Rd
deda2c17dbf00cce72f66f16eda03514 *man/HWE.wrapper.Rd
df23e9716bc3c3b78a315552cd00330a *man/L.Rd
4d624dbee6adda321fe172982c677ac3 *man/L.wrapper.Rd
fc8992b3e14206cef7cbd5c7ba35dd77 *man/MergeData_Output.Rd
6182aed6062f779748906213ea398263 *man/PgrpExtract.Rd
4847623774f0efb4406b64c67bade56d *man/PgrpFormat.Rd
5c4e49c85033415eff1df18f877d0acf *man/PreCheck.Rd
5f8ae79b82647e8fb4e4c0518bcad73e *man/RunChiSq.Rd
ad2265943fdc4f5e36e5810c99ebc2b9 *man/Stripper.Rd
d7fdded65269b19f74ed21a8394d8c4b *man/Tab2GL.Loci.Rd
45b039dc1c19e8d4425e2b4d4dc45c74 *man/Tab2GL.Sub.Rd
82086965f310ece8e76918ad1a07ca69 *man/Tab2GL.wrapper.Rd
4c1eb9876a94404b02bdf5a49c2e27be *man/TableMaker.Rd
c3c72b0c8a451e5cd679358e1a529af9 *man/UpdateRelease.Rd
8f723b67f27b81ad465e641435865d3f *man/buildHAPnames.Rd
d05f4c6d63cf5cc61c5238ce590020f0 *man/buildHAPsets.Rd
df747db6ba4d38be5611a80a94d4edc5 *man/cci.Rd
927fd462604bdb00182beb6aec2dd888 *man/cci.pval.Rd
d7733b0bcdf261349126d7e730eb4ecb *man/cci.pval.list.Rd
93897df56642cc9413fbdc812d88fc2e *man/getAllele.Count.Rd
919e4a812a328c703d4a6d98cd38f2ee *man/getCS.Mat.Rd
ced25dc718162de4e070735df6ce94e9 *man/getCS.stat.Rd
e77fb9abfda2b5b446fd616d57ac5cc5 *man/getFileName.Rd
c19c858ef1d4db6142536f080b1c8bfd *man/getHap.Rd
db80ad4cfbd161df9f6ff530642602fd *man/getObsFreq.Rd
a55b1b0f5e0f5a42babc96e5df831e06 *man/make2x2.Rd
b942c6c5af8c49e6777281a4841acff9 *man/makeComb.Rd
8cfb2dc4515f9f1daa346e8ecb33b35b *man/prepData.Rd
92e44e162c0e3bc8ff30ff26e29e7fdd *man/rmABstrings.Rd
fc2c35ca6808710b7fbcdda7b09722de *man/summaryGeno.2.Rd
fd7e4ffcef6968d908e37cf3726c37b7 *vignettes/BIGDAWG.Rmd
0b31359273377a51d18c4e5c6c5f9e22 *vignettes/GLSconvert.Rmd
