ef513f89ec1822803d29bcc5f462d772 *DESCRIPTION
9e2d7f2f3c69bbcddc6f24396effe993 *NAMESPACE
6811cde2ad7f46055a1e9e57f01e8f07 *NEWS
cf77c76990df54551bb3a71e2652dc7c *R/A.R
77b8bafcf0a1af60ba297b893af2f59d *R/A_ExonPtnAlign_functions.R
ae48abd01392faa94440d19a0bc004b9 *R/A_support_functions.R
853630758973e49bdca2c894bc51804b *R/A_wrapper.R
1654e5b38546e0b66728fa76fcfbeba7 *R/BIGDAWG.R
c08ac5c9f19e7abc034fa910c5bfe671 *R/DRB_Parser.R
14308add11c38d5b54d8cc55a6ef1aa8 *R/ErrLog.R
fee463a577f9c24d437e2615a505c1d2 *R/GL2TAB.R
880c755a9d4cd0735d53fa4781c8d535 *R/GLSconvert.R
9bbcfa6cece8a58adcab9c137161a2e7 *R/HWE.R
4d116d7e395b611bd2f4a055981a95cb *R/HWE_support_functions.R
edea0b8684174eab2ff276d6e1d28692 *R/HWE_wrapper.R
047fd2a96dc1af2cdd1221247020ce29 *R/H_MC.R
4eacc3f665955ddb9b21c8947a199e8b *R/H_support_functions.R
c717edbc71663838d367644190142bf1 *R/H_wrapper_MC.R
68927921d833a42ded83bf0553a0d10d *R/L.R
2acaa1ca4ce90fed712dde9a98371655 *R/L_wrapper.R
981ba972feb2f5367654a6006445d596 *R/TAB2GL.R
a9fa2bc9d0d2a69fdc0bfa56451dd4ab *R/check_functions.R
cec0c1e989feb7af033fe6b396a61019 *R/data.R
3f976cd9c4145fd97c96f706f045b685 *R/general_functions.R
087bbd545d40b4738046e428dc6881c0 *R/stat_functions.R
a85ebecf092c9d322f4e2ed3bce900d5 *R/sysdata.rda
7764b8e87acf253ea7dd24268782386c *R/update_wrapper.R
3c5a4f8de4a26dfdb68b7b24ca38af23 *build/vignette.rds
17675b8e7bbb38adb18dcdb70cea6998 *data/ExonPtnList.rda
e23ea2118873d18487ea900eec10d1e9 *data/HLA_data.rda
893b1ed8746604c6c4ca333ced29b0f4 *inst/doc/BIGDAWG.Rmd
dd1973d10a0fb16d6d8aa75290dbf131 *inst/doc/BIGDAWG.html
136d0143e1b3deca889412ce79b61b17 *inst/doc/GLSconvert.Rmd
956a8d8d66f3ca35eb9f9025661b4a05 *inst/doc/GLSconvert.html
0e04205e8f01de5ea1b8de3605bd3082 *man/A.Rd
f4b44a2b0ae1f65bb7991eb48b7c2d01 *man/A.wrapper.Rd
3cb1ecb55c82d8e1eeef614d436a1133 *man/AA.df.check.Rd
422f646a3a8a7433b64a53e352d6aad3 *man/AAtable.builder.Rd
bc7348ea2194a34130aa2f1f9da6f4cc *man/AlignObj.Create.Rd
2d604131bf684fbd4e519c7078e6ed74 *man/AlignObj.Update.Rd
725914dc71aa2ac4c664f228a1f2e771 *man/AlignmentFilter.Rd
7650f701195256a00c90b7af01fda208 *man/Append.System.Rd
90b0c7dee32292fb7369f1e4c7b550c7 *man/BIGDAWG.Rd
cc51e0cabf2aadbedaedd624b1423ba0 *man/Build.Matrix.Rd
c8deba3db6b7ecf6669ab0d85aa24198 *man/Check.Cores.Rd
43d93eb0ebb6814464199c5526c2986c *man/Check.Data.Rd
c594c6c481d33366b4c43a8681a685e7 *man/Check.Params.GLS.Rd
baadeb63b7e2cf16d739377d4657a78b *man/Check.Params.Rd
0b805720a32989dbaf08c2bafc9f7fd5 *man/CheckAlleles.Rd
7e0a70ed8ee12d6f555e266a510abe37 *man/CheckHLA.Rd
a9460c4922e907c41110393aef189db3 *man/CheckLoci.Rd
c513116f791bbdf048b797da72c303c3 *man/CheckRelease.Rd
a59f7da32aef790bd7c814b9147dd98f *man/CheckString.Allele.Rd
7491ec587db7c78d8e0d0ad8b73d0ecb *man/CheckString.Locus.Rd
2b5a9df860b3df3498ac1e6c5c467ac6 *man/Create.Null.Table.Rd
5b8327ccb2d68eb27fc58e280a2a7df1 *man/DRB345.Check.Wrapper.Rd
af0d4ea970ee086da60b134f22cc431e *man/DRB345.Check.Zygosity.Rd
716f2e8429abfdace8ae14e73616eac2 *man/DRB345.Exp.Rd
02832852f6983ac2ea1c37bdf113c6e8 *man/DRB345.parser.Rd
d5d79f20592af6f1676ac8e2f564cce6 *man/EVSremoval.Rd
b1477597afe6e028f2995f6efaf8f95c *man/Err.Log.Rd
90b9bd3e74849656602a62a298e91207 *man/ExonPtnAlign.Create.Rd
7fea3ab2bc03e84b25e9a13957b4520b *man/ExonPtnList.Rd
126110f6ed72e5dfb79d100e40ca420a *man/Filler.Rd
5e1c54ceed4d54b939b3008c1ca77c19 *man/Format.Allele.Rd
0bb895dd64b750b3da6005be30e642ca *man/Format.Tab.Rd
98cc34051f7e3f8e96fed2c00427d60d *man/GL2Tab.Loci.Rd
7fd3bbd87beba5003af695ee1c465c9c *man/GL2Tab.Sub.Rd
a8d525cdba9c2fd2393f8d0faf7d4a02 *man/GL2Tab.wrapper.Rd
085ac7a1901af7ef6fd8dfa9795e3089 *man/GLSconvert.Rd
aa18f4b4e30ce31a059e11b42c626afe *man/GetField.Rd
c184db5a7fefe3d992d211fd86faf380 *man/GetFiles.Rd
2b830314b7c98fa6e074444dc30234ea *man/H.MC.Rd
f6c293c14ef484438a520255d148b304 *man/H.MC.wrapper.Rd
018c1b60f985bebe8abbf797d1c29b71 *man/HLA_data.Rd
b442487556f2c39a97c026ef100e9790 *man/HWE.ChiSq.Rd
90007f28342e412806a810b7f4301523 *man/HWE.Rd
deda2c17dbf00cce72f66f16eda03514 *man/HWE.wrapper.Rd
df23e9716bc3c3b78a315552cd00330a *man/L.Rd
1cbc0417efd254936c606cbf69e788e3 *man/L.wrapper.Rd
fc8992b3e14206cef7cbd5c7ba35dd77 *man/MergeData_Output.Rd
6182aed6062f779748906213ea398263 *man/PgrpExtract.Rd
4847623774f0efb4406b64c67bade56d *man/PgrpFormat.Rd
5c4e49c85033415eff1df18f877d0acf *man/PreCheck.Rd
5f8ae79b82647e8fb4e4c0518bcad73e *man/RunChiSq.Rd
ad2265943fdc4f5e36e5810c99ebc2b9 *man/Stripper.Rd
d7fdded65269b19f74ed21a8394d8c4b *man/Tab2GL.Loci.Rd
45b039dc1c19e8d4425e2b4d4dc45c74 *man/Tab2GL.Sub.Rd
82086965f310ece8e76918ad1a07ca69 *man/Tab2GL.wrapper.Rd
4c1eb9876a94404b02bdf5a49c2e27be *man/TableMaker.Rd
c3c72b0c8a451e5cd679358e1a529af9 *man/UpdateRelease.Rd
8f723b67f27b81ad465e641435865d3f *man/buildHAPnames.Rd
d05f4c6d63cf5cc61c5238ce590020f0 *man/buildHAPsets.Rd
eca42125e74cde9c01db2a8764fde2e5 *man/cci.Rd
927fd462604bdb00182beb6aec2dd888 *man/cci.pval.Rd
d7733b0bcdf261349126d7e730eb4ecb *man/cci.pval.list.Rd
93897df56642cc9413fbdc812d88fc2e *man/getAllele.Count.Rd
919e4a812a328c703d4a6d98cd38f2ee *man/getCS.Mat.Rd
ced25dc718162de4e070735df6ce94e9 *man/getCS.stat.Rd
e77fb9abfda2b5b446fd616d57ac5cc5 *man/getFileName.Rd
c19c858ef1d4db6142536f080b1c8bfd *man/getHap.Rd
db80ad4cfbd161df9f6ff530642602fd *man/getObsFreq.Rd
a55b1b0f5e0f5a42babc96e5df831e06 *man/make2x2.Rd
b942c6c5af8c49e6777281a4841acff9 *man/makeComb.Rd
8cfb2dc4515f9f1daa346e8ecb33b35b *man/prepData.Rd
92e44e162c0e3bc8ff30ff26e29e7fdd *man/rmABstrings.Rd
fc2c35ca6808710b7fbcdda7b09722de *man/summaryGeno.2.Rd
893b1ed8746604c6c4ca333ced29b0f4 *vignettes/BIGDAWG.Rmd
136d0143e1b3deca889412ce79b61b17 *vignettes/GLSconvert.Rmd
