d1791cae94c055f55ce4be042ff8fbf2 *DESCRIPTION
3e3eb40461dd700c99760bbc683e0dd9 *NAMESPACE
e371b0a06e4b2ea3a347cf0b5034adde *R/Bernadette-package.R
a643dfcf3fb32b384691e205636ab727 *R/age_distribution.R
864f80c6f9474b382f9d55d10f209a47 *R/aggregate_age_distribution.R
414ad2748f0114fe7b2881cb1d3d86e3 *R/aggregate_contact_matrix.R
b8f02bfdf8b5a0ca34931f3f391a9332 *R/aggregate_ifr_react.R
fe3ceb17a401499457211c7477a97310 *R/contact_matrix.R
7e9a7efe2297fc1bef7c0d721a94f11e *R/countries_contact_matrix.R
2c1d640bf50b80e8c5682e81c3df669b *R/countries_un.R
fb8f7d345df5df213054fa927c15bf03 *R/data.R
13c7f88b2abfaacc7d8b01eccbc8eea4 *R/globals.R
8eb973adeb8b28dc604cca4998fb7fc5 *R/infection_to_death.R
c95154434e8506d5df16aae8f5a72ee1 *R/misc.R
82e2438b2900ee09df27b997923d86ac *R/plot_age_distribution.R
b1a08e24b3999f18f65aca83f7b72086 *R/plot_contact_matrix.R
25f0a89f863e15d6141f1a8fa1ad0903 *R/posterior_contactmatrix.R
e4792940dab33701706fb378573ee1a4 *R/posterior_infections.R
6cd3c201f6524770f5089ec769679074 *R/posterior_mortality.R
7b0fdc86cae4d8fe9d3843436b052573 *R/posterior_rt.R
8724a70c260eda47c9404bfc7867ec55 *R/posterior_transmrate.R
2ae6edf70e3467a21036b46feb3fe21c *R/priors.R
93035ec5172fd4ee1f46bd24048b37e6 *R/stan_igbm.R
514943c9c9a30f2bdd23dc6186a24e7c *R/stan_igbm.fit.R
016b34842d35875d70be1e0a7ad66cc7 *R/stanmodels.R
0830630dc675f95f5043812e667c695a *R/summary.stangbm.R
e29dafa700af6b7022d3ecd0942d0cbb *R/zzz.R
11cd7e1fd6d8a6559202b5fb13bb7508 *build/vignette.rds
1cc60bdd8610449d30184e0bb374bf46 *configure
363506993327ae3b7de4216fa3a1aa2b *configure.win
f966be22d6f477eecd549c261f54df0f *data/age_specific_infection_counts.rda
a2fd0a49d951f186e6fa3c08b0bb6f97 *data/age_specific_mortality_counts.rda
d3049c807dfce6e9671353eabcc3cac7 *data/contact_matrices.rda
3bc12498f62479639fa6b0cef2be07a0 *inst/doc/Bernadette.R
d1c5793f00df6de48a3127b15e1e9c9d *inst/doc/Bernadette.Rmd
235396ba41056fbccb07592c4414368e *inst/doc/Bernadette.html
855c064dbf8deaff96c8dc8a87169109 *inst/include/stan_meta_header.hpp
09fb3569a4b5d6b312c8599c143ad6ff *inst/stan/igbm.stan
52e69df1b672ecee3ba750815f824020 *man/Bernadette-package.Rd
85e092b6ba5bb0b642fe05743e613926 *man/age_distribution.Rd
4c8622d09eb42f41b99675702bf9bff4 *man/age_specific_infection_counts.Rd
ece167a8d6e74c000b8bf129ebb55935 *man/age_specific_mortality_counts.Rd
2d1e3e22f640cf0b1144f49945b7fba3 *man/aggregate_age_distribution.Rd
a1df3c77808239dd781640f90f43e4d5 *man/aggregate_contact_matrix.Rd
f71bc637af1a9e58e918c1b606f86284 *man/aggregate_ifr_react.Rd
eee47f463a49819e5cd5249c75ad6b1f *man/contact_matrices.Rd
b224b8c7b758e08ed11bf13fe7386f2e *man/contact_matrix.Rd
03512ae0a3812bde60690fc458f5df2c *man/countries_un.Rd
d606fa2f16a9133a8b8111ae6bce17da *man/country_contact_matrices.Rd
aef54a483e8553f1e0654ba9300106c7 *man/itd_distribution.Rd
68a81d306c10f7500380a82fa1121b6f *man/plot_age_distribution.Rd
0cab20bdccf5f3cc850b0d8ddb8257db *man/plot_contact_matrix.Rd
10761a1fbf1b66ab0ec70a0a609f1438 *man/plot_posterior_cm.Rd
80bceff7290aa39bb507792173ccb203 *man/plot_posterior_infections.Rd
e601c336d8e3e7cad7514e556d581cce *man/plot_posterior_mortality.Rd
699a00d7c64536d9f5e39152aac70cfe *man/plot_posterior_rt.Rd
03f7f001821a06a4bfbbb512a671a9e0 *man/plot_posterior_transmrate.Rd
7b47c365ff3421dd7010436e4f4f9f19 *man/posterior_infections.Rd
4b2b817d0dc782dbb9f872e6b4d4eb06 *man/posterior_mortality.Rd
3ca88111a1470b3f5b1ed6093f48cce7 *man/posterior_rt.Rd
06dd77fd47f07aa34dd00fd958cca137 *man/posterior_transmrate.Rd
82531bb8c740b6d3673f54feb12a03fc *man/priors.Rd
c4eab93259f633ab1b1cce516dac0a4c *man/stan_igbm.Rd
cb83250eedad7adb21479da41944e1ff *man/summary.stanigbm.Rd
e9f8173519a1c4df35524dee3e1ffa19 *src/Makevars.txt
457929755cc1db9abe969d16b0006005 *src/Makevars.win
d70397187a26b7a243cb3f718c905a1a *src/RcppExports.cpp
53c91045ddce598045e7819a71b5bfe6 *src/stanExports_igbm.cc
4ec97b72d8996aab96725bdc00bca342 *src/stanExports_igbm.h
d1c5793f00df6de48a3127b15e1e9c9d *vignettes/Bernadette.Rmd
