Package: BinMat
Type: Package
Title: Processes Binary Data Obtained from Fragment Analysis
Version: 0.1.1
Authors@R: person("Clarke", "van Steenderen", email = "vsteenderen@gmail.com",
                  role = c("aut", "cre"), comment = c(ORCID = "0000-0002-4219-446X"))
Description: A molecular genetics tool that processes binary data from fragment analysis, such as inter-simple sequence repeats (ISSRs) and amplified fragment length polymorphism (AFLP). It consolidates replicate sample pairs, outputs summary statistics, and produces hierarchical clustering trees and nMDS plots. This package was developed from the M.Sc. thesis entitled "A genetic analysis of the species and intraspecific lineages of Dactylopius Costa (Hemiptera:Dactylopiidae)" (van Steenderen, 2019, Rhodes University, Department of Zoology and Entomology, Center for Biological Control (CBC) <https://www.ru.ac.za/centreforbiologicalcontrol/>, Grahamstown, South Africa), <doi:10.13140/RG.2.2.28470.86083>. The GUI version of this package is available on the R Shiny online server at: <https://clarkevansteenderen.shinyapps.io/BINMAT/> , or it is accessible via GitHub by typing: shiny::runGitHub("BinMat", "CJMvS") into the console in R.   
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.0.2
Depends: R (>= 3.0)
Imports: pvclust (>= 2.0), magrittr, MASS (>= 7.3), stats (>= 3.4.0),
        graphics (>= 3.4.0), base (>= 3.4.0)
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2020-02-22 21:31:27 UTC; clarke
Author: Clarke van Steenderen [aut, cre]
    (<https://orcid.org/0000-0002-4219-446X>)
Maintainer: Clarke van Steenderen <vsteenderen@gmail.com>
Repository: CRAN
Date/Publication: 2020-02-29 13:00:05 UTC
