2017-09-18 Li Jianfeng <lee_jianfeng@sjtu.edu.cn>

		* fix invalid test link
		* ANNOVAR databases can be download use
		inst/extdata/databases/ANNOVAR.toml
		* Move databases toml file to inst/extdata/databases/
		* DRAT and fastq-tools be added

2017-07-24 Li Jianfeng <lee_jianfeng@sjtu.edu.cn>

		* picard/mutect be added in inst/extdata/docker.toml

2017-07-24 Li Jianfeng <lee_jianfeng@sjtu.edu.cn>
		
		* craw.all.versions be add in R/craw.R
		* local.source be supported

2017-07-22 Li Jianfeng <lee_jianfeng@sjtu.edu.cn>

		* docker.pull and docker.search be added in R/docker.R
		* miniconda be supported

2017-06-25 Li Jianfeng <lee_jianfeng@sjtu.edu.cn>

		* oncotator be supported
		* VEP be supported
		* `decompress` in configuration file be processed by as.logical

2017-06-24 Li Jianfeng <lee_jianfeng@sjtu.edu.cn>

		* Fix windows install status
		* 'Meta Infmation of Softwares and Databases' project initial

2017-06-23 Li Jianfeng <lee_jianfeng@sjtu.edu.cn>

		* Cancel windows install step (Download still work)

2017-06-22 Li Jianfeng <lee_jianfeng@sjtu.edu.cn>

		* Use v0.3.0 configr: glue parse be supported
		* inst/extdata/nongithub_databases_blast.toml be added
		* inst/extdata/nongithub_databases_meta.toml be added

2017-06-09 Li Jianfeng <lee_jianfeng@sjtu.edu.cn>

		* Reduce the redundant step of extra files copy

2017-06-08 Li Jianfeng <lee_jianfeng@sjtu.edu.cn>

		* multiple line of #R# CMD can be parsed

2017-06-07 Li Jianfeng <lee_jianfeng@sjtu.edu.cn>

		* sleuth be supported (Differential analysis of RNA-Seq data)
		* add no.need.download option in github.toml to control no download
		from github url (e.g. use devtools to install)

2017-06-07 Li Jianfeng <lee_jianfeng@sjtu.edu.cn>

		* #R# RCMD #R# can be run in configuration file

2017-06-03 Li Jianfeng <lee_jianfeng@sjtu.edu.cn>
		
		* extra.list, rcmd.parse and bash.parse, save.to.db parameters be added in
		R/install.R install.bioinfo, install.github, install.nongithub
		* show.all.versions be improved

2017-06-01 Li Jianfeng <lee_jianfeng@sjtu.edu.cn>

		* Non-Github softwares versions can be parsed from cfg or a parse function
		* version_newest_fixed can be added

2017-05-24 Li Jianfeng <lee_jianfeng@sjtu.edu.cn>

		* Github softwares fetching versions by github API

2017-05-19 Li Jianfeng <lee_jianfeng@sjtu.edu.cn>

		* Unittest be added
		* verbose default set TRUE, and log infomation be improved

2017-05-09 Li Jianfeng <lee_jianfeng@sjtu.edu.cn>
		
		* Use environment variable BIO_DEPENDENCE_DIR to set the download.dir and
		destdir of dependence softwares

2017-05-07 Li Jianfeng <lee_jianfeng@sjtu.edu.cn>

		* pcre URL FTP => HTTPS
		* Update R-3.4.0 install and download

2017-05-04 Li Jianfeng <lee_jianfeng@sjtu.edu.cn>

		* dependence.need parameters be added

2017-05-03 Li Jianfeng <lee_jianfeng@sjtu.edu.cn>

		* download.dir be supported
		* install.dir be saved in softwares info configuration file

2017-04-30 Li Jianfeng <lee_jianfeng@sjtu.edu.cn>

		* cnvkit be supported
		* eval.config.groups replaced by eval.config.sections

2017-04-27 Li Jianfeng <lee_jianfeng@sjtu.edu.cn>

		* bwa@0.7.2a => name.saved="bwa_0.7.2a"
		* ROOT/cnvnator/svtoolkit be supported download

2017-04-24 Li Jianfeng <lee_jianfeng@sjtu.edu.cn>
		
		* Update FastQC URL
		* Update Version newest
		* Change dependece install dir in the {{destdir}}/dependence/some_dependence
		* Add "softwares_version" format name recognition, eg. bwa@0.7.2a,
		name.saved="bwa@0.7.2a", version=0.7.2a
		* Release 0.1.0

2017-04-11 Li Jianfeng <lee_jianfeng@sjtu.edu.cn>

		* bcl2fastq2 be supported

2017-04-09 Li Jianfeng <lee_jianfeng@sjtu.edu.cn>

		* samstat, PRINSEQ, SolexaQA, fastx_toolkit be supported

2017-03-19 Li Jianfeng <lee_jianfeng@sjtu.edu.cn>
		
		* GATK, Mutect, SSAHA2, NovoAlign be supported
