93103085e0fd5ee3042b9bf685cf6121 *DESCRIPTION
835f7885923f2d79ce68c868d0d2c590 *NAMESPACE
eef1f20e9cefa496bee2dff7e6a22519 *NEWS.md
d85c70d7cc13131129503e9d73f8eb1b *R/CodelistFromCodelistWithDetails.R
8426d9bfed586d465a8fbd70434b90fd *R/CodelistGenerator-package.R
8ba9cb23bffe2621a5965963ab621a7d *R/checks.R
06d454a3caa5a1b830d375ee0a6be63d *R/codesFromConceptSet.R
37f08cf9cf0f2c0c0c76800dbbb0c8a0 *R/codesInUse.R
6ca33607703cf2018d437dec97995a58 *R/compareCodelists.R
eb959293d0ae26ca18bd8daf70661cd1 *R/data.R
c0d5fbbbd8db7b10e1d891c8ca7bdadf *R/drugCodes.R
fd87372148cb8659d4f5c03c425e75bd *R/findUnmappedCodes.R
4aec24e0d640edce28a10f83428da89b *R/getCandidateCodes.R
5bb085ff56efaa7f035a84f6be0b26ad *R/getDoseUnit.R
ea9e7ceefcd28ec2419721dc251a1fad *R/getICD10StandardCodes.R
8b5b1084a5b6a92197e55491b156de09 *R/getMappings.R
c527e9db07ba2be9042cc3b39982917f *R/getRoutes.R
dde6e2b088236ab4f40f46ad8fe8cffe *R/inputValidation.R
ac6bcebd39f6576d213ac8ffb0a7e5dd *R/mockVocabRef.R
39fdadc19ab1445d200420e1b3698053 *R/runSearch.R
69b110156ed1c2b3008395b65dd96598 *R/stratifyByConcept.R
46fc6b6979c3062155c3dcead2b855fa *R/stratifyByDoseUnit.R
ec403986b91137c2e391a8dd70f901a3 *R/stratifyByRoute.R
6c5217ca1396904ff97ee2f10cf47746 *R/subsetOnDoseUnit.R
06035bb702ab19f239fa7fb5db5c4722 *R/subsetOnRouteCategory.R
9db714ef84baac438c33abe8f1cede2e *R/summariseAchillesCodeUse.R
ff1ea66689a8a7f6410ee77a57bb922d *R/summariseCodeUse.R
9c9a8220f969a0764c30b39204f2f28e *R/summariseOrphanCodes.R
8bbe1a8b85d194a6d6cfae7b7a24e69d *R/sysdata.rda
6b5b205ef5f563f9434c91a70cb9160f *R/tableAchillesCodeUse.R
3c10cbec1ca8e1fd5e466fe775cb88f2 *R/tableCodeUse.R
cf794928715019cf81bd51d467156178 *R/utils-pipe.R
aadee9908841bc2d36fd7bc4b3da0705 *R/vocabUtilities.R
cf1a4c8a6de0447bd2935dd746fb99fb *README.md
cffbcac9044e837ebb1ef0a590e8fa39 *build/vignette.rds
9c639bb4739c5c356e98d0295f8e6982 *data/doseFormToRoute.rda
42b65802d597896b28b57a304820609c *inst/WORDLIST
3ca9cc5c01f646e385c3530e340c0903 *inst/cohorts/cohorts.json
d41d8cd98f00b204e9800998ecf8427e *inst/cohorts/extra_file.txt
820a94709409c3b4bd92fccfb055c944 *inst/cohorts2/GIBleed_male.json
7b66d8b088d973e3fc02396f6ef0ed09 *inst/cohorts2/cerebral_venous_sinus_thrombosis_01.json
d23d36c9c73e3b302e870efd856749b7 *inst/cohorts2/deep_vein_thrombosis_01.json
a0783e75ba5be80391a3938d31c2338d *inst/cohorts_for_mock/oa_desc.json
4eed1d70d532d224af44c7c080ddf3e6 *inst/cohorts_for_mock/oa_no_desc.json
a0783e75ba5be80391a3938d31c2338d *inst/cohorts_for_mock_dups/oa_desc.json
f86b08baf74ab3e00fe012be61e29314 *inst/cohorts_for_mock_dups/oa_no_desc.json
dffe4627e0a18749069471b9eae24936 *inst/cohorts_for_mock_with_exclude/oa_desc.json
3819d7fc0dd23dc6cfeea1608769e6ad *inst/cohorts_for_mock_with_mapped/oa_desc.json
4eed1d70d532d224af44c7c080ddf3e6 *inst/cohorts_for_mock_with_mapped/oa_no_desc.json
28e6093c2345696d3f91fea3e816dcb3 *inst/concepts/acetaminophen.json
d41d8cd98f00b204e9800998ecf8427e *inst/concepts/extra_file.txt
28bafd24684c6e9809c3942abc441d2d *inst/concepts/influenza.json
ffab0d7da54a6ba104894ffcaef29c4a *inst/concepts_dbms/oa_desc.json
c7c56ce5d3f054b25aca0cf3c735736c *inst/concepts_dbms/oa_no_desc.json
f8032cc2f3f6ac5882b3b9a8c59e28a8 *inst/concepts_for_mock/oa_desc.json
01c7b29a2c5b0a1a69c15744ad219cc5 *inst/concepts_for_mock/oa_no_desc.json
f8032cc2f3f6ac5882b3b9a8c59e28a8 *inst/concepts_for_mock_with_exclude/oa_desc.json
800a730473dda4cb2e8f38499bb9cfaf *inst/concepts_for_mock_with_exclude/oa_with_excluded.json
800a730473dda4cb2e8f38499bb9cfaf *inst/concepts_for_mock_with_exclude/oa_with_excluded2.json
f8032cc2f3f6ac5882b3b9a8c59e28a8 *inst/concepts_for_mock_with_mapped/oa_desc.json
8f9fe3443c0fd13d189bece68077d4a5 *inst/concepts_for_mock_with_mapped/oa_with_mapped.json
516f95980a0978f8641e9d771f1c45af *inst/doc/a01_Introduction_to_CodelistGenerator.R
cba2dee4e26e352a6f14c57bfbc29c54 *inst/doc/a01_Introduction_to_CodelistGenerator.Rmd
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5e806a6ae585a539151fc9cf5580bb1f *inst/doc/a03_Options_for_CodelistGenerator.R
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0618707c728e7259350f88f4c9d53840 *inst/introData01.RData
3bf66c1e759d7a5201f8868a14e744b5 *inst/introData02.RData
c583d5e5f085779e27598858fec8e967 *inst/introData03.RData
8a8388cda9d09e8feae92d458cf2ba29 *inst/introData04.RData
5bb685340885dca91d4badfe35fbfb2a *inst/introData05.RData
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3f0aee4d7f3b1a680b664964f756687c *inst/medData01.RData
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3f0aee4d7f3b1a680b664964f756687c *inst/medData03.RData
35b4a2efa38e84d887ba1a0b82f664e7 *inst/medDataConceptClass.RData
84d8224e1c60d2e100ee4854e139646b *inst/medDataDoseForms.RData
28e6093c2345696d3f91fea3e816dcb3 *inst/not_all_concept_sets/acetaminophen.json
9feee06bee33980f1a85c923571feddf *inst/not_all_concept_sets/cohort_def.json
28bafd24684c6e9809c3942abc441d2d *inst/not_all_concept_sets/influenza.json
12e975aaefe3bc5b88f6a50b4bed5d7a *inst/optionsData01.RData
013b6ee27df36385526261493562fe18 *inst/optionsData02.RData
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e81c84c2160b6c94c57da6666e8c1db9 *man/CodelistGenerator-package.Rd
f8c3abab4bd2f31a0bdf3778d34e1794 *man/codesFromCohort.Rd
e45a5bae192d1e346cd5bbe032396376 *man/codesFromConceptSet.Rd
0a8912108f8b5b182183afa2fc771e0e *man/codesInUse.Rd
03d6afc4ccfcdf4f0849891ef61d13fc *man/compareCodelists.Rd
0ad5833d2cbce1880380f57c40f0e762 *man/doseFormToRoute.Rd
1a03bf764f2802ae51d0140aa38848b1 *man/figures/logo.png
f6624a3c3092042f104bc2981d49c2a6 *man/getATCCodes.Rd
083983ec9a24bb62d5c0b6a46a853c7a *man/getCandidateCodes.Rd
adedd916b0b58046d51061843d0cfb19 *man/getConceptClassId.Rd
1f7dd7b39f45da01ac9aa7511562dc1f *man/getDescendants.Rd
762b7a59d99244b5558f1295bdb4c421 *man/getDomains.Rd
e412b44229d4215408deab697aa534e1 *man/getDoseForm.Rd
c8a1bcfd05f1718f14f7fb06344fc217 *man/getDoseUnit.Rd
bc6a462219fe7880e3fd0bae183359c6 *man/getDrugIngredientCodes.Rd
a3285cb6d9a4c44f6850e569baac9ee9 *man/getICD10StandardCodes.Rd
bfe3903cc60acae3dce624681b4768a0 *man/getMappings.Rd
ff309b9c3bb6bebe5a98c31301dae86f *man/getRelationshipId.Rd
d3cbacee53b19bc320019ec0a22dd0f2 *man/getRouteCategories.Rd
3dd4da8ab1e55f758ad8bebcae4b18f9 *man/getVocabVersion.Rd
68da7a3c237b805f69249c84a70add48 *man/getVocabularies.Rd
46e96aab2c7ea585555fa7da783b4b02 *man/mockVocabRef.Rd
29ee7383caa7fc8c14f52bd035509064 *man/pipe.Rd
c09d85bf275c259a7430dafedd6b16d1 *man/restrictToCodesInUse.Rd
4662315d68abdf9cceeb3856dfe05363 *man/sourceCodesInUse.Rd
ce2984f4c7a6569424e6ccd5be8008d3 *man/stratifyByConcept.Rd
d485e52ee842668b6b266a40abcecdb7 *man/stratifyByDoseUnit.Rd
3c981b6cedc778e6f5d8c08be11ce78a *man/stratifyByRouteCategory.Rd
9beaec81ef6c3b412114d7a6f2f5de0c *man/subsetOnDoseUnit.Rd
54146b9b5e5a0ae8f7058ca759d754e7 *man/subsetOnRouteCategory.Rd
0096fdcc7ffd2fd98ee6a09c148f09c2 *man/subsetToCodesInUse.Rd
ea594d85566fb78c2bb3554e7e5d483e *man/summariseAchillesCodeUse.Rd
070f9d623b4d97aed382cb65f3dff870 *man/summariseCodeUse.Rd
ab6b883662c71f6392fbb6e44454d5ad *man/summariseCohortCodeUse.Rd
045bc32029a8edf5ff0a3404ae25be98 *man/summariseOrphanCodes.Rd
5e669d7743495d4a741c8b76254162ac *man/tableAchillesCodeUse.Rd
35882341c05cbf23b7d49f2fecaa078c *man/tableCodeUse.Rd
7b1840832d7de9d335655fc2034179d5 *man/tableCohortCodeUse.Rd
2f3e6888c21e10799daeb653f67419f1 *man/tableOrphanCodes.Rd
54c6e8ade577cd9e23bcf07817edb66f *tests/testthat.R
e330c8f0a2abeebb7bd4e2f93e884d1b *tests/testthat/test-codesFrom.R
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482917c80db6e64d0be40dec6714c526 *tests/testthat/test-findUnmappedCodes.R
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a74972767550c500184f790ba2201052 *tests/testthat/test-summariseAchillesCodeUse.R
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2536644c20d585dd0975dfe268dada8e *tests/testthat/test-summariseOrphanCodes.R
94d0a7b62972fe2b944723da2289403b *tests/testthat/test-synthea_sql_server.R
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f8f3c3a316acf46f8803dcc8e6f8fffb *tests/testthat/test-vocabUtilities.R
cba2dee4e26e352a6f14c57bfbc29c54 *vignettes/a01_Introduction_to_CodelistGenerator.Rmd
6677ef746a1d97606a3bb53356474268 *vignettes/a02_Candidate_codes_OA.Rmd
01075fcadd631710729049c38fb0372c *vignettes/a03_Options_for_CodelistGenerator.Rmd
d075034fe8afd9a5ab863df175956eac *vignettes/a04_Vocab_based_codelists.Rmd
6bf616c1cddc5cd28cf632c988077967 *vignettes/mock_db_fig1.png
159a4342c012e030a46555a265fcbe4c *vignettes/mock_db_fig2.png
42c52193ccb4b159463dfe41bb8a2162 *vignettes/mock_db_fig3.png
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21ceed6a0107371e6783321a2ba2a0b8 *vignettes/mock_db_fig8.png
