798b82a3fa4e366f404883361205354d *DESCRIPTION
b596f33e2369143619ca0fc33c6cc3bb *NAMESPACE
15edab2806d77d93fb7e903bffe89e6b *NEWS.md
de26e2ed0381145de008e45fca54fa63 *R/BEAST.output.R
abd06f86cf8cf63ca2a536c3a6f1906e *R/FossilSim.R
836fabe9335cb32af5c836bbb9008e1b *R/SAtree.R
bb7292c01a1bfb1fe0adbe77cbdde4a4 *R/conversions.R
de2add1feb3fa13c92c19ad927a3f1d9 *R/fossils.R
0f374b95235b40d6d439bde77a919fd7 *R/plot.asymmetric.tree.R
fe40a650241dee4644170c318e5c9389 *R/plot.fossils.R
f9270ea030c104a7fa17f54e6381ff48 *R/plot.taxonomy.R
05a0c593ae068793c72c248bee7c272e *R/reconcile.fossils.taxonomy.R
93be39bec09009d2573d420c38190c9b *R/sim.fbd.R
e9e467e1b529f4fa197e19c770722934 *R/sim.fossils.R
8c570e78ddf9adf87bcb4f83a7b2abde *R/sim.interval.ages.R
c981fe4d23d6d7352241bf7a302b4626 *R/sim.taxonomy.R
cd16855ede3fcc26344274717b0489a9 *R/sim.tip.sampling.R
18977e430b884a1cb8348ce9b35902da *R/sim.trait.values.R
1b44ae9970bd8140f9eb36256f241b99 *R/subsampling.R
f598783f6970fe0ce7f5231fb6c2b213 *R/taxonomy.R
04dba1d2cc8cc2cca22b3e9f230867b6 *R/utils.R
debfc5feeb277f74de5f150ef9af4646 *README.md
7ce44bfd933b83a539648bdbae971cda *build/vignette.rds
9fd6e8ae1b8d98aa940e02af59d7ef06 *inst/WORDLIST
0b2a322ae20cf9ac063d13e5a04f1c6f *inst/doc/SAtree.R
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9d49cf41bcb555b2c51ffc3f0c75b228 *inst/doc/intro.Rmd
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8adf6aa24f8c39c90b7de0ca41ad9ffa *inst/doc/paleotree.R
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dc42139bb5e9c9ba13bbb1a9092002f4 *inst/doc/simfbd.R
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3ed784549c9a57cf3dde1d9f17a35772 *inst/doc/taxonomy.R
ad9f9e69b52cce9fb0ca6f9b58c0c5cb *inst/doc/taxonomy.Rmd
0bfda2901c24587d2be39fa37c8b1222 *inst/doc/taxonomy.html
4ad5c728f34dfbc05f28d1c83cd44f68 *man/FossilSim.Rd
aef0adf5732615749b3bcbd72e6faa7f *man/SAtree.Rd
847b02a12f7cd30821466f7c640a3c55 *man/SAtree.from.fossils.Rd
daf6317f9cf4a050fdefb4454185a5e8 *man/beast.fbd.format.Rd
784acda1ebd3e27021ca311d41812953 *man/count.fossils.Rd
26d1e7eae61357a7aaf1c262e7c36dd5 *man/count.fossils.binned.Rd
a793f20bab24bb26eacc2e8cd6ca20ed *man/fossils.Rd
dc0f50b722ef188d16b715bfac1e7c3d *man/fossils.to.BEAST.constraints.Rd
45a9f67de1f774843ece8d17ec37d66e *man/fossils.to.BEAST.start.tree.Rd
85b790cc62ddf2619fae561eb7295f5b *man/fossils.to.paleotree.record.Rd
e243d730110cb94be471b05f52d93534 *man/fossils.to.pyrate.Rd
7840e1b2dd02394acb1a7d94a822ce5b *man/get.tip.descs.Rd
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0e8f6fc11e83270431b2550c85e04634 *man/place.fossils.Rd
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3db2088cf2c1506fb4b56b6c93bc8598 *man/plot.taxonomy.Rd
eac8423301516ee43eee1352a7a3ad76 *man/prune.fossil.tips.Rd
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940a0503c3969aaaf2644a81f4df25d0 *man/reconcile.fossils.taxonomy.Rd
22ab43fc2ac97fc5b1a140e4a72292d3 *man/remove.stem.fossils.Rd
16bc5b5194ecac8de435a6eb2dd3a18d *man/remove.stem.lineages.Rd
6ec1632408eb701c96929b16ccd04147 *man/sampled.tree.from.combined.Rd
c2f5ec1e3a16dc32ba19f5e4d977be87 *man/sim.anagenetic.species.Rd
2f2e0d2543fe7dcdc44b925ca03e72ec *man/sim.cryptic.species.Rd
41828f18f54c7eda75cc6a3c7cb81f1b *man/sim.extant.samples.Rd
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7a5f3e10fea4f9b8963893307ae200dc *man/sim.fossils.environment.Rd
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e455213dff1a46cb0f72839c1852cc75 *man/sim.gradient.Rd
05571bbdaa52138adecf9f74028d366c *man/sim.interval.ages.Rd
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8d16ccdc768dbf45205b80c1858ca828 *man/sim.tip.samples.Rd
3a1499ac39231cae2b75f5409c237107 *man/sim.trait.values.Rd
be85ef28203ad07614b6809933de3db6 *man/species.end.Rd
0948b357ea93487272899adf4b231624 *man/species.start.Rd
2daf8099eb7e3d09454a21516d652b51 *man/subsample.fossils.oldest.Rd
1a301acc163977c6c3cb932457d0ac28 *man/subsample.fossils.oldest.and.youngest.Rd
541ecbe8e450632f602db1ec51737ec3 *man/subsample.fossils.uniform.Rd
a1caa796363d806251f7b4473a44f997 *man/subsample.fossils.youngest.Rd
492a19d25f920c12b9b7cb074954714c *man/summary.taxonomy.Rd
ea8236f8b61ec4ae567b9d37bbd207a2 *man/taxonomy.Rd
f15687535d2ae0506945c9c06f90f40a *man/tree.max.Rd
f13d64855f34e5b56d1e1b615d08ff05 *vignettes/SAtree.Rmd
fac92ffd26566d94e307719be0fc594b *vignettes/bibliography.bib
1e98c683c934de5bab33f40e66c15c2e *vignettes/fossils.Rmd
9d49cf41bcb555b2c51ffc3f0c75b228 *vignettes/intro.Rmd
f3575ac8c50a63d666be211135cef145 *vignettes/mee.csl
3eae3b61fa4e8c9db2ee4a7ce432891e *vignettes/paleotree.Rmd
adb95ca82f08c24c657683d57c1354f1 *vignettes/simfbd.Rmd
374a1ba7524e3cb245843c7279bd4e1c *vignettes/speciation_types.jpg
ad9f9e69b52cce9fb0ca6f9b58c0c5cb *vignettes/taxonomy.Rmd
