ffd6bb8dc174d5055326c09c77991c97 *DESCRIPTION
aa83a4695e37347100ffd443b80b1cf3 *NAMESPACE
d2361a8600c7c94e5ac3f2d5fd8f97e3 *NEWS.md
908ded7f5d79a72d002e59c235a1adff *R/BEAST.output.R
abd06f86cf8cf63ca2a536c3a6f1906e *R/FossilSim.R
f310de620aae40e35922aa54881041a5 *R/SAtree.R
47507388dd9976edfbd1ef988d7f5d2f *R/conversions.R
de2add1feb3fa13c92c19ad927a3f1d9 *R/fossils.R
0f374b95235b40d6d439bde77a919fd7 *R/plot.asymmetric.tree.R
791b1045ff04e5060577840c16eb3e5b *R/plot.fossils.R
1d572cf3627430d09a03aa4811457a60 *R/plot.taxonomy.R
05a0c593ae068793c72c248bee7c272e *R/reconcile.fossils.taxonomy.R
38aa4b67505bf549c98308c170d17c69 *R/sim.fbd.R
603c2c6583f925a71593e5ba9b263cf2 *R/sim.fossils.R
8c570e78ddf9adf87bcb4f83a7b2abde *R/sim.interval.ages.R
2f3ef463285ed1302cc1f1b399d619b2 *R/sim.taxonomy.R
cd16855ede3fcc26344274717b0489a9 *R/sim.tip.sampling.R
5b6897b52f7cd954b92891fb1b372570 *R/sim.trait.values.R
1b44ae9970bd8140f9eb36256f241b99 *R/subsampling.R
f598783f6970fe0ce7f5231fb6c2b213 *R/taxonomy.R
d5d668187d9ce548f94b8ebc207b816d *R/utils.R
a3813243753919509ca9c6efc6f07bfb *README.md
7a0d9eab566e820c584749161141686e *build/vignette.rds
9fd6e8ae1b8d98aa940e02af59d7ef06 *inst/WORDLIST
8fc75bbdc9e0fa168ab7066cfffdfbe1 *inst/doc/SAtree.R
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584a95da6eef83c579efdc0a68107717 *inst/doc/fossils.R
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027f9eb90ea642137ef1ff6c10e1211f *inst/doc/intro.Rmd
0ff31c6cab77db8c3932cf1b6c60004d *inst/doc/intro.html
5c01ba083ea7d82c49d622ef8051728b *inst/doc/paleotree.R
3eae3b61fa4e8c9db2ee4a7ce432891e *inst/doc/paleotree.Rmd
20de4a28050d507f8245563f37b353e7 *inst/doc/paleotree.html
437573230ffd9f671de03be307f3c6a9 *inst/doc/simfbd.R
adb95ca82f08c24c657683d57c1354f1 *inst/doc/simfbd.Rmd
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3048efd1c91a3f0d2056898f22fc87ea *inst/doc/taxonomy.R
ad9f9e69b52cce9fb0ca6f9b58c0c5cb *inst/doc/taxonomy.Rmd
28e823e7d78759c668dda2d97d9ccaf9 *inst/doc/taxonomy.html
523df79dd6dae313b37aa1d58a327c6a *man/FossilSim.Rd
aef0adf5732615749b3bcbd72e6faa7f *man/SAtree.Rd
145fb544caa3643c460bd7e44b257bde *man/SAtree.from.fossils.Rd
c11e9d733bdb8baa77eb5496a7c8a3be *man/beast.fbd.format.Rd
784acda1ebd3e27021ca311d41812953 *man/count.fossils.Rd
26d1e7eae61357a7aaf1c262e7c36dd5 *man/count.fossils.binned.Rd
a793f20bab24bb26eacc2e8cd6ca20ed *man/fossils.Rd
9f8c5b5dbce1aebc4bdfe82786bc6a86 *man/fossils.to.BEAST.constraints.Rd
45a9f67de1f774843ece8d17ec37d66e *man/fossils.to.BEAST.start.tree.Rd
85b790cc62ddf2619fae561eb7295f5b *man/fossils.to.paleotree.record.Rd
f96e6132e95861e32a0af1f4c05d5a76 *man/fossils.to.pyrate.Rd
7840e1b2dd02394acb1a7d94a822ce5b *man/get.tip.descs.Rd
f97dd186df5f9a82e405e40af7be59d4 *man/paleotree.record.to.fossils.Rd
0e8f6fc11e83270431b2550c85e04634 *man/place.fossils.Rd
c8ef0465bd7f56d97667382129aa4580 *man/plot.fossils.Rd
8b8b22f553a5080f33c5c9af8ae851f0 *man/plot.taxonomy.Rd
eac8423301516ee43eee1352a7a3ad76 *man/prune.fossil.tips.Rd
e383807a5343bf26f1769410c198c1e7 *man/prune.fossils.Rd
b038d43d5e88835218e9f447a2f3b1ff *man/rangeplot.asymmetric.Rd
940a0503c3969aaaf2644a81f4df25d0 *man/reconcile.fossils.taxonomy.Rd
6a0477269679a610076a4e9eb836c98f *man/reconstructed.tree.fossils.objects.Rd
22ab43fc2ac97fc5b1a140e4a72292d3 *man/remove.stem.fossils.Rd
16bc5b5194ecac8de435a6eb2dd3a18d *man/remove.stem.lineages.Rd
1749c66d8825489d8f895a6de1af0c58 *man/sampled.tree.from.combined.Rd
c2f5ec1e3a16dc32ba19f5e4d977be87 *man/sim.anagenetic.species.Rd
2f2e0d2543fe7dcdc44b925ca03e72ec *man/sim.cryptic.species.Rd
9e14bf6230d6c4833e36987e9d521234 *man/sim.extant.samples.Rd
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955e8b8e7f22a735cf5fb090bb127d7f *man/sim.fbd.rateshift.taxa.Rd
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4c9579ed80de6731ba0c6562e743c110 *man/sim.fossils.environment.Rd
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a33caaea1cbc8c90a8fcc559e9a9bab9 *man/sim.fossils.poisson.Rd
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dcf6779cf5cd757c868cf830bee1dbcb *man/sim.interval.ages.Rd
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8d16ccdc768dbf45205b80c1858ca828 *man/sim.tip.samples.Rd
3b3e609a21ab58658bf35e9e6cca1c2b *man/sim.trait.values.Rd
be85ef28203ad07614b6809933de3db6 *man/species.end.Rd
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2daf8099eb7e3d09454a21516d652b51 *man/subsample.fossils.oldest.Rd
1a301acc163977c6c3cb932457d0ac28 *man/subsample.fossils.oldest.and.youngest.Rd
541ecbe8e450632f602db1ec51737ec3 *man/subsample.fossils.uniform.Rd
a1caa796363d806251f7b4473a44f997 *man/subsample.fossils.youngest.Rd
86bf597343c1173952fb694f87b45876 *man/summary.taxonomy.Rd
ea8236f8b61ec4ae567b9d37bbd207a2 *man/taxonomy.Rd
f15687535d2ae0506945c9c06f90f40a *man/tree.max.Rd
ae7ddd113ea0158fa5bc0c7a50485475 *vignettes/SAtree.Rmd
fac92ffd26566d94e307719be0fc594b *vignettes/bibliography.bib
1e98c683c934de5bab33f40e66c15c2e *vignettes/fossils.Rmd
027f9eb90ea642137ef1ff6c10e1211f *vignettes/intro.Rmd
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3eae3b61fa4e8c9db2ee4a7ce432891e *vignettes/paleotree.Rmd
adb95ca82f08c24c657683d57c1354f1 *vignettes/simfbd.Rmd
374a1ba7524e3cb245843c7279bd4e1c *vignettes/speciation_types.jpg
ad9f9e69b52cce9fb0ca6f9b58c0c5cb *vignettes/taxonomy.Rmd
