597716928b5196d3e0840ead8198e406 *DESCRIPTION
f4f0bcf155dde112c365070e6c38fe4c *NAMESPACE
318b5a09798b6f083e800e0f01dd79c2 *R/Merge_methylation.R
39f7421b7787671426eca948e923e80c *R/Proce_cli.R
0fb1c6d6ebb753ff63f7cac1d8c6d455 *R/TCGA_id_conversion.R
086da02465ee3f67d3e5fb5f67bba817 *R/ann_merge.r
f0fe8288d9d79e1cabe80714575cffea *R/calculate_mean_module.R
1b388c8f0ae456278dfe511abd278f19 *R/calculate_mean_profile.R
581f1013f10103fe27761d46de3c9d16 *R/data.R
4d3d7a447436c13b0020259af442ae8d *R/fpkm_count_conversion.r
c8cbed57934992625536322f55c6d4ea *R/id_conversion_all.r
85c61958b75681d318cfb2460f61cebc *R/kegg_diff_gene.R
a1516b6ce0ffb0690b45c1a3e38e4921 *R/prepareChi.r
7d481311eae9f26b1eb187154c60c558 *R/rep.R
8ac5ef79f26db0b15361d28f55e101ca *R/sysdata.rda
0b9525a48c9258b1a637d9d27c02aefb *README.md
dc970896758acae2e5bdefbc40943f2e *build/vignette.rds
070dceb636fc0300be4b8976b81f767e *data/GSE66705_sample2.rda
26c344440ec0680f674e038a93ce42fb *data/geneExpress.rda
32f4cbf7a8c1a47aaeda3f57c40609ab *data/hgnc.rda
0d27064c8e20b1cc6fd928a98e5812a7 *data/kegg_liver.rda
e7b32221f71207346295f527d6840298 *data/module.rda
44b721329635bc2151cb5dfafaaa0c11 *data/profile.rda
a2654539d5e3d3141966e92ad9606b4a *data/ventricle.rda
5dfeda88a38093d3972b832bb7376133 *inst/doc/GeoTcgaData.R
ac51940d502820d1c16dc709fb0930eb *inst/doc/GeoTcgaData.Rmd
c9a0ede4931e78fde7a7516edfda93b9 *inst/doc/GeoTcgaData.html
c1f1064d71b9dd78b25eb2395597f2ba *inst/extdata/cnv/00de3/HONGS_p_TCGAb3_75_76_77_NSP_G.txt
7dd1340c0458e7a9b8f5bbf7ba634fcc *inst/extdata/cnv/00e8/MICHE_p_TCGAb_428_429_NS.txt
506237f91f37d1715dad33222854e9a0 *inst/extdata/cnv/00f9/MINAE_p_TCGA_200_202_203_S.txt
61fd34b66933c1b9f5d6cacf9f4c36d3 *inst/extdata/cnv/0a01/KNELT_p_TCGA_b123_131_S.txt
01d01462b432864748c044ebf8a76eb6 *inst/extdata/metadata.cart.2018-11-09.json
d3c2aeab7040e0fac2df07c00841fc0c *inst/extdata/methy/0a0/jhu-usc.e.Hu.4.lvl-3.TCGA-13-1405-01A-01D-0460-05.g2.txt
4c45f15e7d48280706982a290345ad23 *inst/extdata/methy/0a0/logs/bb.parcel
9a1ded1b42706b93fa013f36baadd98b *inst/extdata/methy/0a6/jhu-usc.e.Hu.10.lvl-3.TCGA-30-1880-01A-01D-0652-05.g.txt
a196acefabd631541ac92ac53de3fd98 *inst/extdata/methy/0a6/logs/aa.parcel
00453808795d9ebfdfdc99d1701d1a9a *inst/extdata/tcga_cli/at.orl.TCGA-2V-A95S.xml
02f2857e34873e819d6a1eba5754c18c *inst/extdata/tcga_cli/ati.org.TCGA-2Y-A9GT.xml
b01ae925009c5b86a0e430fe2b9889dc *inst/extdata/tcga_cli/ats.org.TCGA-2Y-A9GS.xml
a6876632ef6a95d8a1aea6929b9d38b3 *man/GSE66705_sample2.Rd
a671c7b543feaec71af09eb846450eeb *man/Merge_methy_tcga.Rd
424605e0b4e160470649d64939374732 *man/ann_merge.Rd
8182efd920d651ad1ff18734330beaa9 *man/cal_mean_module.Rd
806254f3c1902570afa412762275befb *man/classify_sample.Rd
9c0ac94847e1c261d4fab574687ca2d5 *man/countToFpkm_matrix.Rd
64cef98c4d33054c4b6ce82284d51ad9 *man/countToTpm_matrix.Rd
57cb954bc667cc80572b523ff8a6be23 *man/diff_gene.Rd
0ba8103013875c65f5b5eedfc8b5d86f *man/differential_cnv.Rd
9549fa51a40b656c76147492b0a3a691 *man/fpkmToTpm_matrix.Rd
e52b6ee61990ec6fb57d2c25a01a727d *man/geneExpress.Rd
a5716c1886adbea6bf171d8b9784cd65 *man/gene_ave.Rd
b3a0cd9abc4be4472b0d412fa14f7955 *man/hgnc.Rd
cb9b85f751ee99c64f9ad8da62b95757 *man/id_conversion.Rd
46ffa72d98309f0046310f509e7e3be0 *man/id_conversion_vector.Rd
53feab76089e6aa41dac7b6ded2eabc3 *man/kegg_liver.Rd
fbed5c1dce0d2e68f87c1479a74b124e *man/module.Rd
03a2711a1d8b0d3fcd3abe430aeb6e0a *man/prepare_chi.Rd
f6e644c06c45b35bdec897f6e451b7be *man/profile.Rd
3ce526e469f38ba0865fb9df4275399f *man/rep1.Rd
193f6a617c55a586fc76e5cc056328de *man/rep2.Rd
68dd7ed61cca3f867fd3f2fe9a84e24b *man/tcga_cli_deal.Rd
82129c4414b64407312e017ad4665005 *man/ventricle.Rd
ac51940d502820d1c16dc709fb0930eb *vignettes/GeoTcgaData.Rmd
