e0248c1632119cbf00f9905a686d7a8a *DESCRIPTION
daa0251c04c6e85218f8ee872cb32f9b *NAMESPACE
26068e2a23eff45e4b836b5b3ccfde32 *R/CNV.R
a668d974e9d24b4fd429206901a1b455 *R/Merge_methylation.R
46d72124b56c6b58c4a66b93d025817b *R/Proce_cli.R
f3c5a44dc06c78bec9f00dce76342e3f *R/RNA_seq.R
a49d930463fe29a44e7970cf5cae3f3a *R/SNP.R
608b03cfdedefad5d40b3bc37fa5f489 *R/TCGA_id_conversion.R
001b310b9431dfbd580861738859b90a *R/ann_merge.r
2c3a1a4d469b9ab5780302eb60675f88 *R/arrayDiff.R
e09900945df6271b6fe8d2005d0abb9a *R/calculate_mean_module.R
58754926a01f75b933c85af56ae6b3aa *R/calculate_mean_profile.R
95a55b473eca590d985693e2d0df992f *R/data.R
ccf5400ee481264f5fb944210410c18e *R/fpkm_count_conversion.r
7b70adac94a9b4fb96c8c72978b36f43 *R/id_conversion_all.r
fc47e35b55a389a9218d3c2138ebf559 *R/kegg_diff_gene.R
93579a3dbbb5e4e9b5023ba677eebe16 *R/prepareChi.r
6b90322adde66edab7a4e405e69980b0 *R/rep.R
1cfb7c0b0e9bd2de5eeb3ba0c6687738 *R/sysdata.rda
4628929452643ee0a1cf158cc9869898 *R/zzz.R
8740ceae300bb1e5e9a402b1594b45f5 *README.md
99e6f9abdcf91a2fd857b9d2ef8778e2 *build/vignette.rds
070dceb636fc0300be4b8976b81f767e *data/GSE66705_sample2.rda
2c3b1a331bbc035f9c9dacbba7409d53 *data/geneExpress.rda
e06307da70e5ba9acf08f891c6a5281e *data/gene_cov.rda
0d27064c8e20b1cc6fd928a98e5812a7 *data/kegg_liver.rda
e7b32221f71207346295f527d6840298 *data/module.rda
5c158ca8f5329118aa349868c27c2207 *data/profile.rda
a2654539d5e3d3141966e92ad9606b4a *data/ventricle.rda
a089b19d3b556faec39650a2c22a86b9 *inst/doc/GeoTcgaData.R
01302f6efe0fc72a86efc774be136d2a *inst/doc/GeoTcgaData.Rmd
5d2f2f0603d9f69b4b08a25d4044c8f1 *inst/doc/GeoTcgaData.html
24b78cdcc2434bb768c734a29f6434bf *inst/extdata/build_data.R
c1f1064d71b9dd78b25eb2395597f2ba *inst/extdata/cnv/00de3/HONGS_p_TCGAb3_75_76_77_NSP_G.txt
7dd1340c0458e7a9b8f5bbf7ba634fcc *inst/extdata/cnv/00e8/MICHE_p_TCGAb_428_429_NS.txt
506237f91f37d1715dad33222854e9a0 *inst/extdata/cnv/00f9/MINAE_p_TCGA_200_202_203_S.txt
61fd34b66933c1b9f5d6cacf9f4c36d3 *inst/extdata/cnv/0a01/KNELT_p_TCGA_b123_131_S.txt
64330603d35743df897919ae584c5a61 *inst/extdata/methy/0a0b4/jhu-usc.e.H.4.lvl-3.TCGA-13-1405-01A-01D-0460-05.g.txt
4c45f15e7d48280706982a290345ad23 *inst/extdata/methy/0a0b4/logs/file1.parcel
f15727a813fd30e12f12f17cd0f2a9d2 *inst/extdata/methy/0a6b/jhu-usc.e.H.10.lvl-3.TCGA-30-1880-01A-01D-0652-05.g.txt
a196acefabd631541ac92ac53de3fd98 *inst/extdata/methy/0a6b/logs/file2.parcel
c9de45e09425dafb46373b4173a11c28 *inst/extdata/methy/0ae7/jhu-usc.H.8.l.I.TCGA-30-1714-01A-02D-0563-05.g.txt
eee6658420b812f0944e0d344e2dbdff *inst/extdata/methy/0ae7/logs/file3.parcel
066bf478da051d3ecf2f54a7e0dcbd44 *inst/extdata/methy/0b32/jhu-usc.e.H.5.l.TCGA-13-1510-01A-02D-0475-05.gdc_hg38.txt
8176387afc23a4e68e9ca359c9c1f842 *inst/extdata/methy/0b32/logs/file4.parcel
e4d4f801e753f9f2389b6158d7dbda56 *inst/extdata/tcga_cli/at.orl.TCGA-2V-A95S.xml
97789ecd129c813171d83ea155ead64f *inst/extdata/tcga_cli/ati.org.TCGA-2Y-A9GT.xml
cc8997a1c2d85d311f1550e9a5c854ea *inst/extdata/tcga_cli/ats.org.TCGA-2Y-A9GS.xml
7107803a9177de430ede805446458f44 *man/Diff_limma.Rd
7486ee9f29373fbaf99b3b5bbb7a54ac *man/GSE66705_sample2.Rd
d71cf346d0e136eeae7d54f3afa2aa29 *man/Merge_methy_tcga.Rd
3c1332a013343477c609f718484394e2 *man/arrayDiff.Rd
62622e7d3aaf2e0dc3059fe3e542fd2f *man/cal_mean_module.Rd
515534f967e69ada368caec3e7c54ee0 *man/classify_sample.Rd
603f271c63821f3bc6231f01d3d27838 *man/countToFpkm_matrix.Rd
dcd9531285553284244ef6b62cde28d0 *man/countToTpm_matrix.Rd
56f7022821c4b1386b8c8e437e546ec9 *man/diff_CNV.Rd
71033c2e507cd10994b0faf29c9c6111 *man/diff_RNA.Rd
def64b282a0dcbc2d2d751867725a6e6 *man/diff_RNA_ucsc.Rd
93c3cc87c5dc8f0611cb3e9741a5d119 *man/diff_SNP.Rd
fc9eeeeaa089b54b7729c7853d9df651 *man/diff_SNP_tcga.Rd
28af9bab236dc946a34ad7525058372f *man/diff_gene.Rd
b01456df93c877677ca14deffd51b2dd *man/differential_cnv.Rd
15d2fa73477cf8b62fc19aa75b949888 *man/fpkmToTpm_matrix.Rd
dd1ef1c2c8d6ce2f699b62aa912850c9 *man/geneExpress.Rd
120f56aafa88fc04b218a5eff7ea3feb *man/gene_ave.Rd
9ee8ae7288c0bb7d1fcff0a2297ad4ca *man/gene_cov.Rd
26d59db2feab7cb9edcee3d43ae97fd2 *man/id_ava.Rd
9b61a4977d073fe0430e6e31283a7a16 *man/id_conversion.Rd
44038fa2e3f5d4eba29d5bd255ced0e4 *man/id_conversion_vector.Rd
45182302bf32ec4a15d007067143d737 *man/kegg_liver.Rd
87b1839d76ddafcd6f5c014064a65697 *man/methyDiff.Rd
8df7f060a9a2185d0252e4fb0c91ffe6 *man/methyDiff_ucsc.Rd
c4e1031d35530ed701ec335c5b17490c *man/module.Rd
40a95c76b9b8ababbe56ebac71f6c190 *man/prepare_chi.Rd
77b66b94933f6c978761e84a78532e05 *man/profile.Rd
0d69d468cf75ab333cb5f18513b08e8e *man/rep1.Rd
ff66b9c55c88b6eec7a6964ee32dd04a *man/rep2.Rd
3e03273105878977812b2517adb215f5 *man/tcga_cli_deal.Rd
0b125813593c862ea65b59da5ac0051a *man/ventricle.Rd
01302f6efe0fc72a86efc774be136d2a *vignettes/GeoTcgaData.Rmd
