22229b7672aae4d1489d4c7b305696a1 *CHANGELOG
f673382b3ff8009e67417d9d7c8df48c *DESCRIPTION
30a4afe00cc363338e907c0a89eec90e *NAMESPACE
8a2b88883c43d035b2a91bba133cdb53 *R/IO.fun.R
7386146bd49849c3c22e9b115fb548c5 *R/TPR-DAG.R
fbdabbaa497e5724e0a54bd806d849af *R/descens.R
5cf78d51154e79ec2d8bdeedb20c7466 *R/graph.utility.R
f9287264c618e962915d55a60a9ff0a0 *R/heuristic.methods.R
62e1823940a4fe4887f737991f0416d4 *R/htd.R
fceb4c1a086846707a739a20efa8fe63 *R/norm.fun.R
5c2a047a70342bd3f4a4459c27fe80bc *R/perf.meas.R
309dc136f7f74ca4129233e5a08cf6bf *R/pkg.attach.R
1b7e6530a26cbb00c63c2c628efd18b3 *R/pkg.import.R
912205a9a9fb8a824c38b25751c7c2b4 *R/tpr.R
43328fa551e8065e4d3c5da2b6e55ec0 *data/graph.rda
29f9d7a6477e2472d64779231a2c867e *data/labels.rda
b38c67e9118b338a34a4f67284fed863 *data/scores.rda
8a1a6c2671b3af583bf39bc32c10698d *data/test.index.rda
a6784be6fba1850db1a693ecd6b44e17 *data/wadj.rda
231deecd6cdc3aaf9c031bcf8e8ee443 *inst/CITATION
b97a12872485e69149b4f3314aa24488 *inst/doc/HEMDAG.pdf
b1bbec7b5b69b547e88c35424c84bf08 *inst/extdata/edges.txt
ef5e0e6edf805661dfea5c69f21e5366 *inst/extdata/gene2pheno.txt
e5a3e547e99f7b46cfea5849094ebbb9 *inst/extdata/graph.edges.txt
bb15fe60d27be57d7e18a53cf48f7184 *man/AUPRC.Rd
000ad2588ef83553f42d8af083c743f3 *man/AUROC.Rd
4832f11fec25039d452de81daee1e4ac *man/DESCENS.Rd
c3ff01d968286185ddb89aae39a6f9dc *man/Do.HTD.Rd
4d04e44eaee47748bbdfebfdc3f5210f *man/Do.HTD.holdout.Rd
fdea4a44d1a01a833e2aaa1423a2a775 *man/Do.flat.scores.normalization.Rd
4552a0c86406fcf3dd749e82cf958ed6 *man/Do.full.annotation.matrix.Rd
4cc564522260a71b3a26a1ba3466bafd *man/Do.heuristic.methods.Rd
0b166895b8d9af58be15873880a5ec6c *man/Do.heuristic.methods.holdout.Rd
0ce6f6c892fae21e0c2fe1f0e8b9d3ba *man/FMM.Rd
5b49925e69423bbe199d08d5b03251c6 *man/HEMDAG-package.Rd
4351a9e4a67536244ebfd00a54adc821 *man/HTD-DAG.Rd
a777be169a472c896076edad9bc93bd9 *man/Heuristic-Methods.Rd
bb12bbb6d21d3cc3ff4d3275aac0abdb *man/Multilabel.F.measure.Rd
9c2064e59b507e4829c75691e5c73bdb *man/PXR.Rd
ac230130f75ce79134e7d587abe55e16 *man/TPR-DAG-cross-validation.Rd
51f04b69687414b6709ee9341b966c3f *man/TPR-DAG-holdout.Rd
9315d0d64f0bb316c9f284b7d8b5a7bc *man/TPR-DAG-variants.Rd
48472979d2c8dbc54fa5ac885953cb26 *man/TPR-DAG.Rd
af34f87668ac08607cc092b54e4dab98 *man/ancestors.Rd
b00e9cc999d05f29cc29fc8f8fbf3276 *man/check.DAG.integrity.Rd
6f74f462394fdf395deae2559a3097a4 *man/check.annotation.matrix.integrity.Rd
08a9aa62e91a985354bfea3c1d151b7c *man/children.Rd
f3213dbdf1ff0565894636378cc83519 *man/compute.flipped.graph.Rd
cdac15f4d63925eab4d1658d584c1253 *man/constraints.matrix.Rd
fc5307cf7e6bbbb470670432abb78e5f *man/descendants.Rd
e0a738bc30fb8f5b6dd22ee3543f32dd *man/distances.from.leaves.Rd
13f829728c33b3d368abf4df1740ac5d *man/do.edges.from.HPO.obo.Rd
056fe25433637b35ad670a2a28c727e4 *man/do.subgraph.Rd
b3a4878c7fc16df0995d2919068193aa *man/do.submatrix.Rd
ea68c2deac875c4c8d6c33bdb11f4fca *man/do.unstratified.cv.data.Rd
e6f026e71f9ea5506dd72a42a215a59a *man/example.datasets.Rd
bb7bcc82cc6e197c629f06e853345f17 *man/find.best.f.Rd
12636996849865bc94c66bdae8ad7d7c *man/find.leaves.Rd
9a39746dad432cecf19753d2ea6380a0 *man/full.annotation.matrix.Rd
d3bcd5da0caaeda901a29c89fdf3c26c *man/graph.levels.Rd
a06e31988baa77cde7d9abddda8d91cc *man/hierarchical.checkers.Rd
b9b524db72b7f31f0a757a19e80b4b40 *man/normalize.max.Rd
8e6581230f6ab5630eedeb80cc5533b4 *man/parents.Rd
f3e973cd7653c8da394bcf46fb83add6 *man/read.graph.Rd
dda5efa36654a111b2e3fbf522b61727 *man/read.undirected.graph.Rd
530050888bb31560f7d4d3a310897866 *man/root.node.Rd
7711dc329db53f2f5dda4699d737e218 *man/scores.normalization.Rd
67390fe2443467043d730aafcf0bdca7 *man/specific.annotation.list.Rd
9b1db5707544a28d6a2857f4bbccac6e *man/specific.annotation.matrix.Rd
0de6d48aca6b9e2bcd596e6ec1b53b5d *man/stratified.cross.validation.Rd
e578670bf744ba38ca32e19d16f1b56e *man/transitive.closure.annotations.Rd
8a21b9a5f9a812211b463ab424947d42 *man/tupla.matrix.Rd
47a856ce57cee74a842869f0708de3fd *man/weighted.adjacency.matrix.Rd
3fdf67b47caba78c5b432e4f6b3c7631 *man/write.graph.Rd
