279c3525208b077e5f5cad9990182d11 *CHANGELOG
41a18170a87108692f6247296e4c618b *DESCRIPTION
66dd26c4e81f80b611b1c895611f0fd8 *NAMESPACE
5b68381d92f7409c449321a49d2a75bc *R/GPAV.R
d2dcd214aa4ed7c223a218d09e2dcadb *R/HEMDAG-defunct.R
8a2b88883c43d035b2a91bba133cdb53 *R/IO.fun.R
972cb18ce43e735bdebc383531e57bd1 *R/TPR-DAG.R
2cfb47e732cff1eeac8a400c5d126cca *R/graph.utility.R
fb752163e129502a2c43f23ab0426805 *R/heuristic.methods.R
abc5aaf9ce707a732977b913eadd7ae6 *R/htd.R
fceb4c1a086846707a739a20efa8fe63 *R/norm.fun.R
4dabae55a1827e45fd1aef92b8ced1b8 *R/perf.meas.R
309dc136f7f74ca4129233e5a08cf6bf *R/pkg.attach.R
49607c3a633112531d736bbfe0bb7cbd *R/pkg.import.R
43328fa551e8065e4d3c5da2b6e55ec0 *data/graph.rda
29f9d7a6477e2472d64779231a2c867e *data/labels.rda
b38c67e9118b338a34a4f67284fed863 *data/scores.rda
8a1a6c2671b3af583bf39bc32c10698d *data/test.index.rda
a6784be6fba1850db1a693ecd6b44e17 *data/wadj.rda
231deecd6cdc3aaf9c031bcf8e8ee443 *inst/CITATION
c080191acaaad9d2657c483559d4d9f6 *inst/doc/HEMDAG.pdf
b1bbec7b5b69b547e88c35424c84bf08 *inst/extdata/edges.txt
ef5e0e6edf805661dfea5c69f21e5366 *inst/extdata/gene2pheno.txt
e5a3e547e99f7b46cfea5849094ebbb9 *inst/extdata/graph.edges.txt
777a595327b377a975c25fa0b0c78776 *man/AUPRC.Rd
67d7845d1ab8e4a8dad3a231277010d1 *man/AUROC.Rd
e7901c55696871e66fe33906e0fca029 *man/Do.GPAV.Rd
fb257905a56c0107ed101bf4237c3d07 *man/Do.GPAV.holdout.Rd
40f3707203a75b75a3d4a006f9f7d805 *man/Do.HTD.Rd
a069f3892a8c10eb1dd27e6107ee9099 *man/Do.HTD.holdout.Rd
fdea4a44d1a01a833e2aaa1423a2a775 *man/Do.flat.scores.normalization.Rd
4552a0c86406fcf3dd749e82cf958ed6 *man/Do.full.annotation.matrix.Rd
bfe0b96e41711bf8b7988a2db46b0e0d *man/Do.heuristic.methods.Rd
9eb67d2b5a363016741356e7ec589186 *man/Do.heuristic.methods.holdout.Rd
215f91e43b4d587e2542f52b7ab65293 *man/FMM.Rd
8f6a098b7e1cc842f2dff8c7e14e56e6 *man/GPAV.Rd
888f554ce8b35423802df18540e337d0 *man/GPAV.over.examples.Rd
286d06f189783dd1d769eddd8f4048db *man/GPAV.parallel.Rd
2c11031c899f3a6b18369acb14b5364c *man/HEMDAG-defunct.Rd
e9f13387e7ca32018ef8767475fa7674 *man/HEMDAG-package.Rd
4351a9e4a67536244ebfd00a54adc821 *man/HTD-DAG.Rd
a777be169a472c896076edad9bc93bd9 *man/Heuristic-Methods.Rd
41dde6870c55b36665b763411d252bcc *man/Multilabel.F.measure.Rd
f0f24366f2282aeb50f70ce3a01a34c4 *man/PXR.Rd
d70dd8285def12b3646da7b48349aca2 *man/TPR-DAG-cross-validation.Rd
4125a68149733b3c7f3cc2f63facc8c3 *man/TPR-DAG-holdout.Rd
68b0ad7bab96d2740ec85ac0c734411c *man/TPR-DAG-variants.Rd
e34a06f43b13c88a27dd35dff3bdf5cb *man/adj.upper.tri.Rd
af34f87668ac08607cc092b54e4dab98 *man/ancestors.Rd
dfa3fd6c86ca5fcfc91244624c44ca32 *man/check.DAG.integrity.Rd
6ce05fb93b64ac877082884b4dfc98bf *man/check.annotation.matrix.integrity.Rd
08a9aa62e91a985354bfea3c1d151b7c *man/children.Rd
f3213dbdf1ff0565894636378cc83519 *man/compute.flipped.graph.Rd
cdac15f4d63925eab4d1658d584c1253 *man/constraints.matrix.Rd
fc5307cf7e6bbbb470670432abb78e5f *man/descendants.Rd
e0a738bc30fb8f5b6dd22ee3543f32dd *man/distances.from.leaves.Rd
13f829728c33b3d368abf4df1740ac5d *man/do.edges.from.HPO.obo.Rd
056fe25433637b35ad670a2a28c727e4 *man/do.subgraph.Rd
19946bda7c59f6b7616e3a047f973215 *man/do.submatrix.Rd
ea68c2deac875c4c8d6c33bdb11f4fca *man/do.unstratified.cv.data.Rd
e6f026e71f9ea5506dd72a42a215a59a *man/example.datasets.Rd
85a53a039a3bbe6abea35cd9b3ebb3fb *man/find.best.f.Rd
12636996849865bc94c66bdae8ad7d7c *man/find.leaves.Rd
9a39746dad432cecf19753d2ea6380a0 *man/full.annotation.matrix.Rd
d3bcd5da0caaeda901a29c89fdf3c26c *man/graph.levels.Rd
a06e31988baa77cde7d9abddda8d91cc *man/hierarchical.checkers.Rd
b9b524db72b7f31f0a757a19e80b4b40 *man/normalize.max.Rd
8e6581230f6ab5630eedeb80cc5533b4 *man/parents.Rd
f3e973cd7653c8da394bcf46fb83add6 *man/read.graph.Rd
dda5efa36654a111b2e3fbf522b61727 *man/read.undirected.graph.Rd
530050888bb31560f7d4d3a310897866 *man/root.node.Rd
7711dc329db53f2f5dda4699d737e218 *man/scores.normalization.Rd
67390fe2443467043d730aafcf0bdca7 *man/specific.annotation.list.Rd
9b1db5707544a28d6a2857f4bbccac6e *man/specific.annotation.matrix.Rd
0de6d48aca6b9e2bcd596e6ec1b53b5d *man/stratified.cross.validation.Rd
e578670bf744ba38ca32e19d16f1b56e *man/transitive.closure.annotations.Rd
8a21b9a5f9a812211b463ab424947d42 *man/tupla.matrix.Rd
47a856ce57cee74a842869f0708de3fd *man/weighted.adjacency.matrix.Rd
3fdf67b47caba78c5b432e4f6b3c7631 *man/write.graph.Rd
d7e565c842d42654368e3bdffdb81eb4 *src/GPAV.cpp
e3d3cb360fbfdb3c6974e14eb5f09870 *src/Makevars
a02ba382db6b024cb986998db299dd7a *src/registerDynamicSymbol.c
