
useDynLib(HapEstXXR)

export ( 

  itegeppXXR ,
  dec2bin,
  
  allele1to2 , allele2to1 ,
  alleleRto1 , alleleRto2 ,
  allele1toR , allele2toR , catt ,

  powerset,

  coding.baseline.allele,

  makePlinkInputFile ,
  makeHaploviewInputFile, 

  read.data ,
  read.haploview,

  order.families,

  single.snp.test ,
  single.snp.test.binomial , single.snp.test.gaussian ,
  single.snp.test.families , single.snp.test.survival , multi.snp.test,
  single.snp.test.casecohort,single.snp.test.casecohort.prentice,


  single.haplotype.test,  single.haplotype.test.binomial , single.haplotype.test.families ,

         msr ,
         msr.binomial.forward.unadjusted ,
         msr.binomial.forward.adjusted ,
         msr.binomial.haplotype.test.unadjusted,
         msr.binomial.haplotype.test.adjusted,
         msr.families.unadjusted,


         msr.gaussian.forward.unadjusted ,
         msr.gaussian.forward.adjusted ,
         msr.gaussian.haplotype.test.unadjusted,
         msr.gaussian.haplotype.test.adjusted,


  msr.meta,
  msr.meta.binomial.unadjusted.families.unadjusted,
  msr.meta.error.check,
  meta.func,
  meta.fisher,
  meta.rank,

  hapest.caco


  )
  


