808fef434c8a39e1a2551bd3b4840b10 *DESCRIPTION
38daa956d2b7b5c80f0cf748e6f9b827 *NAMESPACE
5986e6402724232d4b66a8f2cd6af77b *NEWS
b36ac435e05cae710372bdb74c8c3293 *R/BaumWelch.R
507db1a5cdfb9cdf4e5f3809572c6fa5 *R/BaumWelch.dthmm.R
2fa01127f8d4a4c9b610e84d48bfc1a5 *R/BaumWelch.mmglm0.R
9a85721be472f1b93b3544a7810a51b3 *R/BaumWelch.mmglm1.R
9819615c35cbcdbf9ae58019373bfa67 *R/BaumWelch.mmglmlong1.R
c18fd8bf1be0ee225d57013d648f30e0 *R/BaumWelch.mmpp.R
9776b0b112d1b87dca07f4c0e724a8a6 *R/Estep.R
0adc3fa001f46bad1c7406e10ffc9dd2 *R/Estep.mmglm1.R
6e8b968ef352440706021c6cacf0dbe8 *R/Estep.mmpp.R
ea6699b335f60fa3e4cbdb357e7d8973 *R/Estep0.mmpp.R
03d47b51d556497f902fbd88fc35a1aa *R/Mstep.beta.R
6f801f5237aa670172299f7c7d71551d *R/Mstep.binom.R
e3d3f422017d742b7d54810795a252fe *R/Mstep.exp.R
b9b3116e10fbde160dc635aee1bd572d *R/Mstep.gamma.R
d57668dd9d9fbf9781bf1b20310d9aff *R/Mstep.glm.R
5e9f235cc37f888c1848597ac62b0065 *R/Mstep.lnorm.R
f9598dbef0905f21f23fc646de22c6de *R/Mstep.logis.R
385bc1c339c20428e5cbb202a1a8e7b7 *R/Mstep.mmglm1.R
f8c8071cc833bc48c8247544a6b61d9c *R/Mstep.norm.R
a1e717f7372f8434f3d61b2e1198a7a1 *R/Mstep.pois.R
dc42a133d95a09833fb4f97af74ca646 *R/Pi2vector.R
1783f01a0d38807707960dd91eec2488 *R/Q2vector.R
428821f286549ac38548d8f6701298b7 *R/Viterbi.R
9d8569d9a3c58333b0deae379d6d9e00 *R/Viterbi.dthmm.R
056eaa236a5f7bf1356298a4a5aa9827 *R/Viterbi.mmglm0.R
07a5e909c17ad145ec7e7b87ce2dcbd8 *R/Viterbi.mmglm1.R
e7bf57612b8ff170e4b377c83ab57b49 *R/Viterbi.mmglmlong1.R
c1412c0b0fecb5a6c00a07b8ae59d495 *R/Viterbi.mmpp.R
614970bcb247f68df18672ad288776f7 *R/as.dthmm.R
afcb946128317a68493fc4ac8c351b66 *R/as.mmglm0.R
b6a63d8cc9929d6e2bd361d4818a85b1 *R/backward.R
588d47e122be0dddd54a105fe2b862d4 *R/bwcontrol.R
d155b9e7b679b002faef3452c96c2cc1 *R/compdelta.R
79c0daaa3ddf746e2229f8b4b5c5f6b8 *R/defunct.R
ce1dd43f7f3687f8110af18417bc70b8 *R/deprecated.R
6d776eaace2bc060203680f1c5a5a455 *R/dglm.R
9c4d180a798ce8f1198aab969aa92462 *R/dmmglm.R
7dd3bac0d2cf66de92879735870ed0db *R/dthmm.R
4b869572482146a3a9df8a01f281a3ac *R/forward.R
101729a36096414b22b9a6f1f18d2ee2 *R/forwardback.R
62c78a67253dcd604222f7634001c3d8 *R/forwardback.dthmm.R
2d4b160b889c38356542365a82c767b8 *R/forwardback.mmpp.R
1c64456168287d436c48b90ec2f695a0 *R/getj.R
5c598002c10fad0a610004ee7b63c5cc *R/logLik.dthmm.R
5fb04fde1f00fea83c70f9bddfdffa1e *R/logLik.mmglm0.R
b12b0989c18a9d447748bae0f743c2fb *R/logLik.mmglm1.R
51a0cc13396ee4ca0414fa1463a5704a *R/logLik.mmglmlong1.R
d8415aaeed2ed15a4eeb290be894bafc *R/logLik.mmpp.R
87526902670a956fc1a041ed7e5fea9d *R/makedensity.R
3a0b4230ea9862b917e91d50b8f8996f *R/makedensity1.R
52271babc87f27edadef0d2e94526d8d *R/makedistn.R
0c00ec60aaca215498ef082124588b9e *R/mchain.R
3452e292b1360319377ad56fb1990cdd *R/mmglm.R
6f3edbe2a3a683172889bbe76aa6cf68 *R/mmglm0.R
d4d0763afecc7f355cd1e569e413356d *R/mmglm1.R
a68c55e678ef81394c932569a28b626e *R/mmglmlong1.R
67281efea4b1506f8f8f225c2ad5301f *R/mmpp.R
7f17ca47e2a8faeca692dd9e747ad65e *R/neglogLik.R
179f17695e4cd2498018b003cc3367c6 *R/pglm.R
5cd4a1ecdf3d0f8da1cafd80387942bc *R/pmmglm.R
5298ba4bced12c53c2a66f5c1aee81c5 *R/probhmm.R
8998623ff7a8d3afa1aac4ddec2c846a *R/residuals.dthmm.R
5405bfe7d856c9c5d14b20b75f6a0fbd *R/residuals.mmglm0.R
48617c26bf266811eef34ef5f5bce521 *R/residuals.mmglm1.R
b3dc0f49947469b69f24264e7dce6e66 *R/residuals.mmglmlong1.R
19a4f53d2a2f2d08c95c938e9ad6edf9 *R/residuals.mmpp.R
f2a96a716956bca0a0167e514ef74514 *R/simulate.dthmm.R
dcd855717e896a02b45a7c8563f2aced *R/simulate.mchain.R
5fbd5cd74981d7ab328f706d594b5316 *R/simulate.mmglm0.R
9f24df99dcad7f0724c35fd71359c57b *R/simulate.mmglm1.R
e1f29793bafad45d134dfb00d16a96ea *R/simulate.mmglmlong1.R
58c0d34e02f7a0e844cfae89f48cd88a *R/simulate.mmpp.R
5b76918b5ad03fcc4da8420e62c138bd *R/summary.dthmm.R
cf95ca2e9e28e28a90eb0fd796f28b66 *R/summary.mmglm0.R
a5670e6a8b4712b60b8ee8268f764b25 *R/summary.mmglm1.R
42911f366f770f7648f39a263d0a6301 *R/summary.mmglmlong1.R
3f1b9c5d8e2272780ad40a417b578fa8 *R/summary.mmpp.R
864fc25551cf9cd206d1cbe2f081daec *R/vector2Pi.R
befe46c5ea55a55167939fdb2c8901c5 *R/vector2Q.R
64d3eb2498905f047b07d4b32dfd7e5c *demo/00Index
f1975359a0e73f39fb3f064c9ce5033b *demo/beta.R
901c94928a6e4cc0a5c587537fa44cce *demo/gamma.R
bfee2e728683d14aba32abdbcd7c0883 *demo/lnorm.R
890f3cd71b860f6a19233c5cbfc37f22 *demo/logis.R
0f808acf3f40e8df57d84906e9c816e4 *demo/norm.R
78dbf968c06379f63ec270565efeda51 *inst/CITATION
70840df96372833d27618e4fb9234719 *inst/doc/index.html
c1e21a8e0ebd1b5467c3a60919c980ab *man/BaumWelch.Rd
1ef8ee92866d6a3b00d6cc439d857d82 *man/Changes.Rd
69e9392ae7ec514b115a4e47c83abeb3 *man/Demonstration.Rd
e055514980070bfeab459d960eb967bc *man/Estep.Rd
259d9b8830abf98c98c091b2e8168bf1 *man/HiddenMarkov-defunct.Rd
1279c1a0ad1f56c1e1b1716a05b2abb7 *man/HiddenMarkov-dthmm-deprecated.Rd
46a03a92b90e340e4607892fd48f7fe1 *man/HiddenMarkov-internal.Rd
e84d3bb4d8054b3c8915fd08d7d60d17 *man/HiddenMarkov-mmpp-deprecated.Rd
4ec88718a61cb81ca92a08fd140b7661 *man/HiddenMarkov.Rd
562a49d4cfaff3a1271f9d9a624cbb71 *man/Mstep.Rd
9b37b4a7908d9847db12329392142b48 *man/Transform-Parameters.Rd
183ef6c5941245d251cc21fffcbb8985 *man/Viterbi.Rd
73fba223602bde0bac06794f3a7709cf *man/bwcontrol.Rd
8f984f36bc34814de42755564725830c *man/compdelta.Rd
c1aeae442055cf3f5ee83537ce2626f5 *man/dthmm.Rd
e1412a61da030aeddf52f0046550fb2c *man/forwardback.Rd
bb8c2a98efbc4d0bb0b9d4f6f008e1ab *man/logLik.Rd
929b0f1b02ec8d880d4b2fe9a99c1135 *man/mchain.Rd
3cb7668d2cac7854f4d2ba00c354efca *man/mmglm-2nd-level-functions.Rd
aac51a7a71d80368ba8c2508a394074e *man/mmglm.Rd
56950ae6c4919547484cc9c6b084a2ef *man/mmpp-2nd-level-functions.Rd
b1b787110ac4bcd725f377c3b112c5f4 *man/mmpp.Rd
342773a7da5260186da1bf602d6169c4 *man/neglogLik.Rd
4e96317702bd02f1d66c01a7393ae51e *man/probhmm.Rd
a76277452d400ce5876045c7ec62ac85 *man/residuals.Rd
92a3139abf62df70909dd66c70f5a792 *man/simulate.Rd
071ae56118e4b636c96f5f98821dce51 *man/summary.Rd
ef77e67d8e6f96fab822fcbbdf0e8168 *src/dthmm.f
b8fb8b67ee35dda0e0dec0ee63dd38d8 *src/extract.f
56c62a1f408cd2d89cb9418c0dc53fbf *src/mmpp.f
d31d7e4dd849f0d41c6184161046343c *src/multiply.f
bd834944e3e77c48c14cae8acdc94132 *tests/dthmm-mmglm1-gaussian.R
af8ab1438065c0d1a0fbea257dcfcc0f *tests/dthmm-mmglm1-gaussian.Rout.save
d1caa70359a2c13ad85baea1dcc63100 *tests/mmglm0-mmglm1-binomial.R
80be8f2b67facbf75cd00d746525bd83 *tests/mmglm0-mmglm1-binomial.Rout.save
dad7be149e4d1e317e575ce2c33d21a1 *tests/mmglm0-mmglm1-gaussian.R
b88ca660927180017684abb94dd4433d *tests/mmglm0-mmglm1-gaussian.Rout.save
2a3735723f31d252feeae2347f67c3fa *tests/mmglm0-mmglm1-gaussian1.R
03bee4d4697d53042795675b19604aad *tests/mmglm0-mmglm1-gaussian1.Rout.save
