Package: IDSL.CSA
Type: Package
Title: Composite Spectra Analysis (CSA) for High-Resolution Mass
        Spectrometry Analyses
Version: 1.0
Authors@R: c(
    person(family = "Fakouri-Baygi", given = "Sadjad", email = "sadjad.fakouri-baygi@mssm.edu",
           role = c("cre","aut"), comment = c(ORCID = "0000-0002-6864-6911")),
    person(family = "Barupal", given = "Dinesh", email = "dinesh.kumar@mssm.edu", role = "aut",
           comment = c(ORCID = "0000-0002-9954-8628")))
Depends: R (>= 4.0)
Imports: IDSL.MXP (>= 1.8), IDSL.IPA (>= 2.6), IDSL.FSA, doParallel,
        foreach, readxl
Author: Sadjad Fakouri-Baygi [cre, aut]
    (<https://orcid.org/0000-0002-6864-6911>),
  Dinesh Barupal [aut] (<https://orcid.org/0000-0002-9954-8628>)
Maintainer: Sadjad Fakouri-Baygi <sadjad.fakouri-baygi@mssm.edu>
Description: A fragmentation spectra detection pipeline for high-throughput LC/HRMS data processing using peaklists generated by the 'IDSL.IPA' package. The 'IDSL.CSA' package can deconvolute fragmentation spectra from Composite Spectra Analysis (CSA), Data Dependent Acquisition (DDA) analysis, and various Data-Independent Acquisition (DIA) methods such as MS^E, All-Ion Fragmentation (AIF) and SWATH analysis.
License: MIT + file LICENSE
URL: https://github.com/idslme/idsl.csa
BugReports: https://github.com/idslme/idsl.csa/issues
Encoding: UTF-8
Archs: i386, x64
NeedsCompilation: no
Packaged: 2023-01-21 00:41:52 UTC; sfbaygi
Repository: CRAN
Date/Publication: 2023-01-23 09:30:09 UTC
