LEVEL	TAXA	ROLLUP	ASSIGNED	TAXID
	Actinobacteridae	295	0	85003
	Coriobacterineae	167	0	255727
	Clostridiales genomosp. BVAB3	2	0	699245
	Actinomycineae	1	0	85005
	Mobiluncus/Falcivibrio group	1	0	279916
root	root	9716	1325	1
superkingdom	Bacteria	8079	236	2
superkingdom	Viruses	261	0	10239
superkingdom	Archaea	31	0	2157
superphylum	Bacteroidetes/Chlorobi group	3049	1	68336
superphylum	Chlamydiae/Verrucomicrobia group	2	0	51290
superphylum	Fibrobacteres/Acidobacteria group	1	0	131550
phylum	Firmicutes	3376	24	1239
phylum	Bacteroidetes	3048	9	976
phylum	Proteobacteria	666	7	1224
phylum	Actinobacteria	462	0	201174
phylum	Tenericutes	163	0	544448
phylum	Fusobacteria	58	0	32066
phylum	Spirochaetes	54	0	203691
phylum	Euryarchaeota	27	9	28890
phylum	Synergistetes	5	0	508458
phylum	Cyanobacteria	4	2	1117
phylum	Crenarchaeota	4	0	28889
phylum	Thermodesulfobacteria	2	0	200940
phylum	Chlamydiae	2	0	204428
phylum	Nitrospirae	1	0	40117
phylum	Acidobacteria	1	0	57723
subphylum	delta/epsilon subdivisions	27	0	68525
class	Bacteroidia	3028	0	200643
class	Bacilli	2863	6	91061
class	Gammaproteobacteria	505	5	1236
class	Actinobacteria	462	0	1760
class	Negativicutes	353	0	909932
class	Coriobacteridae	167	0	84998
class	Mollicutes	163	0	31969
class	Clostridia	136	2	186801
class	Betaproteobacteria	110	0	28216
class	Fusobacteriia	58	0	203490
class	Spirochaetia	54	0	203692
class	Alphaproteobacteria	17	0	28211
class	Deltaproteobacteria	16	0	28221
class	Epsilonproteobacteria	11	0	29547
class	Halobacteria	8	0	183963
class	Methanococci	8	0	183939
class	Flavobacteriia	6	0	117743
class	Synergistia	5	0	649775
class	Thermoprotei	4	0	183924
class	Thermodesulfobacteria	2	0	67799
class	Chlamydiia	2	0	204429
class	Methanomicrobia	2	0	224756
class	Cytophagia	2	0	768503
class	Nitrospira	1	0	203693
subclass	Oscillatoriophycideae	2	0	1301283
order	Bacteroidales	3028	57	171549
order	Lactobacillales	2821	11	186826
order	Enterobacteriales	388	0	91347
order	Selenomonadales	353	2	909929
order	Actinomycetales	230	8	2037
order	Coriobacteriales	167	0	84999
order	Mycoplasmatales	163	0	2085
order	Propionibacterineae	154	0	85009
order	Clostridiales	107	1	186802
order	Burkholderiales	105	1	80840
order	Pseudomonadales	70	0	72274
order	Bifidobacteriales	65	0	85004
order	Fusobacteriales	58	0	203491
order	Micrococcineae	58	0	85006
order	Spirochaetales	54	0	136
order	Herpesvirales	52	0	548681
order	Bacillales	36	0	1385
order	Caudovirales	34	0	28883
order	Thermoanaerobacterales	25	0	68295
order	Pasteurellales	23	0	135625
order	Campylobacterales	11	0	213849
order	Desulfovibrionales	10	0	213115
order	Rhizobiales	9	0	356
order	Methanococcales	8	0	2182
order	Aeromonadales	8	0	135624
order	Halobacteriales	8	0	2235
order	Corynebacterineae	7	1	85007
order	Flavobacteriales	6	0	200644
order	Synergistales	5	0	649776
order	Xanthomonadales	5	0	135614
order	Sulfolobales	4	0	2281
order	Bdellovibrionales	3	0	213481
order	SAR11 cluster	2	0	54526
order	Oscillatoriales	2	0	1150
order	Thermodesulfobacteriales	2	0	188710
order	Chlamydiales	2	0	51291
order	Vibrionales	2	0	135623
order	Halanaerobiales	2	0	53433
order	Myxococcales	2	0	29
order	Cytophagales	2	0	768507
order	Rhodobacterales	2	0	204455
order	Methanosarcinales	2	0	94695
order	Rhodospirillales	2	0	204441
order	Neisseriales	2	0	206351
order	Rickettsiales	2	0	766
order	Alteromonadales	2	0	135622
order	Rhodocyclales	2	0	206389
order	Gallionellales	1	0	713636
order	Pseudonocardineae	1	0	85010
order	Nitrospirales	1	0	189778
order	Chromatiales	1	0	135613
order	Frankineae	1	0	85013
order	Desulfuromonadales	1	0	69541
suborder	Sorangiineae	2	0	80812
family	Streptococcaceae	2803	0	1300
family	Prevotellaceae	2663	0	171552
family	Enterobacteriaceae	388	3	543
family	Veillonellaceae	351	0	31977
family	Porphyromonadaceae	226	8	171551
family	Coriobacteriaceae	167	1	84107
family	Mycoplasmataceae	163	0	2092
family	Propionibacteriaceae	152	0	31957
family	Polydnaviridae	126	44	10482
family	Peptostreptococcaceae	94	0	186804
family	Burkholderiaceae	93	3	119060
family	Pseudomonadaceae	70	0	135621
family	Bifidobacteriaceae	65	0	31953
family	Micrococcaceae	56	2	1268
family	Fusobacteriaceae	55	0	203492
family	Spirochaetaceae	52	0	137
family	Bacteroidaceae	48	0	815
family	Alloherpesviridae	45	0	548682
family	Rikenellaceae	34	0	171550
family	Baculoviridae	28	0	10442
family	Pasteurellaceae	23	0	712
family	Siphoviridae	23	0	10699
family	Thermoanaerobacteraceae	23	0	186814
family	Bacillaceae	18	0	186817
family	Anelloviridae	14	0	687329
family	Staphylococcaceae	10	1	90964
family	Desulfovibrionaceae	10	0	194924
family	Comamonadaceae	9	2	80864
family	Halobacteriaceae	8	0	2236
family	Methanococcaceae	8	0	2183
family	Podoviridae	8	0	10744
family	Aeromonadaceae	8	0	84642
family	Campylobacteraceae	7	0	72294
family	Herpesviridae	7	0	10292
family	Synergistaceae	5	0	649777
family	Xanthomonadaceae	5	0	32033
family	Helicobacteraceae	4	0	72293
family	Flavobacteriaceae	4	1	49546
family	Sulfolobaceae	4	0	118883
family	Corynebacteriaceae	4	0	1653
family	Brucellaceae	4	0	118882
family	Lactobacillaceae	4	0	33958
family	Clostridiaceae	4	0	31979
family	Myoviridae	3	0	10662
family	Planococcaceae	3	0	186818
family	Rhizobiaceae	3	0	82115
family	Leptotrichiaceae	3	0	1129771
family	Listeriaceae	3	0	186820
family	Rickettsiaceae	2	0	775
family	Methanosarcinaceae	2	0	2206
family	Vibrionaceae	2	1	641
family	Iridoviridae	2	0	10486
family	Alteromonadaceae	2	0	72275
family	Enterococcaceae	2	0	81852
family	Bacteriovoracaceae	2	0	263369
family	Eubacteriaceae	2	0	186806
family	Microbacteriaceae	2	1	85023
family	Rhodobacteraceae	2	0	31989
family	Nocardioidaceae	2	0	85015
family	Parachlamydiaceae	2	0	92713
family	Peptococcaceae	2	0	186807
family	Poxviridae	2	0	10240
family	Paenibacillaceae	2	0	186822
family	Rhodocyclaceae	2	0	75787
family	Rhodospirillaceae	2	0	41295
family	Neisseriaceae	2	0	481
family	Halanaerobiaceae	2	0	972
family	Phycodnaviridae	2	0	10501
family	Thermoanaerobacterales Family III. Incertae Sedis	2	0	543371
family	Polyangiaceae	2	0	49
family	Thermodesulfobacteriaceae	2	0	188711
family	Nocardiaceae	1	0	85025
family	Mycobacteriaceae	1	0	1762
family	Bdellovibrionaceae	1	0	213483
family	Lachnospiraceae	1	0	186803
family	Clostridiales Family XI. Incertae Sedis	1	0	543310
family	Pelobacteraceae	1	0	213423
family	Alcaligenaceae	1	0	506
family	Cytophagaceae	1	0	89373
family	Oxalobacteraceae	1	0	75682
family	Hyphomicrobiaceae	1	0	45401
family	Methylobacteriaceae	1	0	119045
family	Geodermatophilaceae	1	0	85030
family	Pseudonocardiaceae	1	0	2070
family	Chromatiaceae	1	0	1046
family	Brachyspiraceae	1	0	143786
family	Nitrospiraceae	1	0	189779
family	Retroviridae	1	0	11632
family	Carnobacteriaceae	1	0	186828
family	Cyclobacteriaceae	1	0	563798
family	Actinomycetaceae	1	0	2049
family	Gallionellaceae	1	0	90627
family	Leptospiraceae	1	0	170
subfamily	Autographivirinae	8	0	542835
subfamily	Alphaherpesvirinae	5	0	10293
subfamily	Spounavirinae	3	0	857473
subfamily	Betaherpesvirinae	2	0	10357
subfamily	Chordopoxvirinae	2	0	10241
subfamily	Orthoretrovirinae	1	0	327045
tribe	Rickettsieae	2	0	33988
genus	Streptococcus	2746	347	1301
genus	Prevotella	2663	182	838
genus	Veillonella	338	0	29465
genus	Escherichia	306	0	561
genus	Mycoplasma	163	1	2093
genus	Propionibacterium	152	0	1743
genus	Atopobium	149	0	1380
genus	Tannerella	126	0	195950
genus	Filifactor	90	0	44259
genus	Ralstonia	81	1	48736
genus	Ichnovirus	75	0	10483
genus	Serratia	74	0	613
genus	Pseudomonas	70	17	286
genus	Bifidobacterium	64	0	1678
genus	Porphyromonas	59	0	836
genus	Lactococcus	57	0	1357
genus	Fusobacterium	55	0	848
genus	Rothia	50	0	32207
genus	Bacteroides	48	3	816
genus	Treponema	46	2	157
genus	Ictalurivirus	45	0	172653
genus	Alistipes	34	0	239759
genus	Odoribacter	29	0	283168
genus	Alphabaculovirus	28	0	558016
genus	Haemophilus	19	0	724
genus	Cryptobacterium	17	0	84162
genus	Bacillus	16	0	1386
genus	Alphatorquevirus	14	8	687331
genus	Thermoanaerobacter	12	0	1754
genus	Selenomonas	12	0	970
genus	Caldanaerobacter	11	0	249529
genus	Lawsonia	10	0	41707
genus	Staphylococcus	9	1	1279
genus	Burkholderia	9	0	32008
genus	T7likevirus	8	0	110456
genus	Aeromonas	8	0	642
genus	Methanococcus	8	0	2184
genus	Bracovirus	7	0	10485
genus	Campylobacter	7	0	194
genus	Borrelia	6	0	138
genus	Xanthomonas	5	0	338
genus	Fretibacterium	5	0	1434006
genus	Simplexvirus	5	0	10294
genus	Ochrobactrum	4	0	528
genus	Lactobacillus	4	0	1578
genus	Helicobacter	4	0	209
genus	Clostridium	4	2	1485
genus	Corynebacterium	4	0	1716
genus	Sulfolobus	4	0	2284
genus	Candidatus Amoebophilus	3	0	281119
genus	Solibacillus	3	0	648800
genus	Salmonella	3	0	590
genus	Spounalikevirus	3	0	140409
genus	Natrialba	3	0	63742
genus	Micrococcus	3	0	1269
genus	Listeria	3	0	1637
genus	Verminephrobacter	3	0	364316
genus	Natronococcus	3	0	29287
genus	Candidatus Sulcia	2	0	336809
genus	Neisseria	2	0	482
genus	Kribbella	2	0	182639
genus	Sinorhizobium	2	0	28105
genus	Bacteriovorax	2	0	146784
genus	Ranavirus	2	0	10492
genus	Halanaerobium	2	0	2330
genus	Thermodesulfobacterium	2	0	1740
genus	Pasteurella	2	0	745
genus	Leptotrichia	2	0	32067
genus	Rickettsia	2	0	780
genus	Paenibacillus	2	0	44249
genus	Eubacterium	2	0	1730
genus	Methanomethylovorans	2	0	101191
genus	Paludibacter	2	0	346096
genus	Alicycliphilus	2	0	201096
genus	Enterococcus	2	1	1350
genus	Parachlamydia	2	0	83551
genus	Phaeobacter	2	0	302485
genus	Histophilus	2	0	214906
genus	Parabacteroides	2	0	375288
genus	Geobacillus	2	0	129337
genus	Molluscipoxvirus	2	0	10278
genus	Sorangium	2	0	39643
genus	Trichodesmium	2	0	1205
genus	Caldicellulosiruptor	2	0	44000
genus	Candidatus Endolissoclinum	2	0	1263978
genus	Echinicola	1	0	390846
genus	Salinarchaeum	1	0	1269201
genus	Microbacterium	1	0	33882
genus	Candidatus Liberibacter	1	0	34019
genus	Streptobacillus	1	0	34104
genus	Bdellovibrio	1	0	958
genus	Alteromonas	1	0	226
genus	Leptospira	1	0	171
genus	Collimonas	1	0	202907
genus	Ornithobacterium	1	0	28250
genus	Methylobacterium	1	0	407
genus	Thermodesulfovibrio	1	0	28261
genus	Mobiluncus	1	0	2050
genus	Finegoldia	1	0	150022
genus	Cytomegalovirus	1	0	10358
genus	Hyphomicrobium	1	0	81
genus	Fibrella	1	0	861914
genus	Roseburia	1	0	841
genus	Aromatoleum	1	0	551759
genus	Phaeovirus	1	0	181085
genus	Saccharopolyspora	1	0	1835
genus	Nocardia	1	0	1817
genus	Carnobacterium	1	0	2747
genus	Proteus	1	0	583
genus	Arthrobacter	1	1	1663
genus	Mycobacterium	1	0	1763
genus	Brachyspira	1	0	29521
genus	Marinobacter	1	1	2742
genus	Pelobacter	1	0	18
genus	Allochromatium	1	0	85072
genus	Nonlabens	1	0	363408
genus	Roseolovirus	1	0	40272
genus	Gardnerella	1	0	2701
genus	Dickeya	1	0	204037
genus	Candidatus Koribacter	1	0	658061
genus	Achromobacter	1	0	222
genus	Aliivibrio	1	0	511678
genus	Azospira	1	0	146937
genus	Desulfosporosinus	1	0	79206
genus	Megamonas	1	0	158846
genus	Polaromonas	1	0	52972
genus	Sideroxydans	1	0	314343
genus	Croceibacter	1	0	216431
genus	Halovivax	1	0	332951
genus	Gammaretrovirus	1	0	153135
genus	Desulfitobacterium	1	0	36853
genus	Candidatus Symbiobacter	1	0	1436289
genus	Modestobacter	1	0	88138
genus	Coccolithovirus	1	0	346673
genus	Candidatus Carsonella	1	0	114185
species group	Streptococcus anginosus group	216	20	671232
species group	Pseudomonas fluorescens group	24	6	136843
species group	Bacillus cereus group	14	0	86661
species group	Pseudomonas putida group	12	0	136845
species group	pseudomallei group	7	0	111527
species group	Streptococcus dysgalactiae group	7	0	119603
species group	Pseudomonas aeruginosa group	5	0	136841
species group	Pseudomonas syringae group	3	0	136849
species group	spotted fever group	2	0	114277
species group	Bacillus subtilis group	1	0	653685
species group	Mycobacterium tuberculosis complex	1	0	77643
species subgroup	Pseudomonas syringae group genomosp. 2	3	0	251698
species	Prevotella intermedia	713	0	28131
species	Streptococcus parasanguinis	707	283	1318
species	Streptococcus salivarius	614	242	1304
species	Prevotella melaninogenica	581	0	28132
species	Prevotella sp. oral taxon 299	550	0	652716
species	Prevotella denticola	538	0	28129
species	Veillonella parvula	338	0	29466
species	Escherichia coli	306	23	562
species	Streptococcus thermophilus	183	127	1308
species	Streptococcus oralis	168	0	1303
species	Streptococcus anginosus	162	30	1328
species	Mycoplasma hyopneumoniae	151	16	2099
species	Atopobium parvulum	149	0	1382
species	Propionibacterium acnes	149	147	1747
species	Streptococcus pneumoniae	134	108	1313
species	Tannerella forsythia	126	0	28112
species	Streptococcus mitis	119	0	28037
species	Streptococcus sanguinis	102	0	1305
species	Prevotella dentalis	93	0	52227
species	Filifactor alocis	90	0	143361
species	Ralstonia pickettii	80	16	329
species	Streptococcus pseudopneumoniae	77	0	257758
species	Serratia marcescens	73	0	615
species	Lactococcus lactis	57	3	1358
species	Fusobacterium nucleatum	55	2	851
species	Bifidobacterium dentium	54	0	1689
species	Ictalurid herpesvirus 1	45	45	10401
species	Porphyromonas gingivalis	43	7	837
species	Treponema denticola	41	0	158
species	Glypta fumiferanae ichnovirus	38	38	419435
species	Hyposoter fugitivus ichnovirus	37	37	265522
species	Rothia mucilaginosa	30	0	43675
species	Odoribacter splanchnicus	29	0	28118
species	Alistipes shahii	29	0	328814
species	Maruca vitrata nucleopolyhedrovirus	27	27	1307954
species	Streptococcus constellatus	20	0	76860
species	Rothia dentocariosa	20	0	2047
species	Cryptobacterium curtum	17	0	84163
species	Pseudomonas fluorescens	16	2	294
species	Streptococcus sp. I-G2	16	16	1156431
species	Porphyromonas asaccharolytica	16	0	28123
species	Haemophilus influenzae	16	9	727
species	Streptococcus suis	15	5	1307
species	Streptococcus intermedius	14	4	1338
species	Propionibacterium phage PA6	13	13	376758
species	Bacteroides fragilis	13	5	817
species	Pseudomonas putida	12	0	303
species	Streptococcus gordonii	12	0	1302
species	Selenomonas sputigena	12	0	69823
species	Bacillus thuringiensis	12	0	1428
species	Bacteroides salanitronis	12	0	376805
species	Thermoanaerobacter wiegelii	12	0	46354
species	Caldanaerobacter subterraneus	11	0	911092
species	Bacteroides vulgatus	11	0	821
species	Streptococcus oligofermentans	10	0	195041
species	Lawsonia intracellularis	10	0	29546
species	Bifidobacterium longum	10	9	216816
species	Pseudomonas sp. TKP	8	8	1415630
species	Streptococcus sp. I-P16	8	8	1156433
species	Aeromonas hydrophila	8	0	644
species	Yersinia phage phiA1122	8	8	227720
species	Campylobacter concisus	7	0	199
species	Burkholderia mallei	7	7	13373
species	Methanococcus vannielii	7	0	2187
species	Cotesia congregata bracovirus	7	7	39640
species	Borrelia duttonii	6	0	40834
species	Prevotella ruminicola	6	0	839
species	Bacteroides helcogenes	6	0	290053
species	Mycoplasma hyorhinis	5	1	2100
species	Staphylococcus epidermidis	5	0	1282
species	Fretibacterium fastidiosum	5	5	651822
species	Streptococcus dysgalactiae	5	0	1334
species	Alistipes finegoldii	5	0	214856
species	Cercopithecine herpesvirus 2	5	5	10317
species	[Clostridium] difficile	4	2	1496
species	Streptococcus phage 5093	4	4	646413
species	Mycoplasma pulmonis	4	0	2107
species	Sulfolobus islandicus	4	0	43080
species	Ochrobactrum anthropi	4	0	529
species	Solibacillus silvestris	3	0	76853
species	Bacillus phage SPO1	3	3	10685
species	Verminephrobacter eiseniae	3	0	364317
species	Micrococcus luteus	3	0	1270
species	Natronococcus occultus	3	0	29288
species	Salmonella enterica	3	0	28901
species	Xanthomonas campestris	3	3	339
species	Pseudomonas aeruginosa	3	0	287
species	Pseudomonas savastanoi	3	0	29438
species	Streptococcus phage YMC-2011	3	3	1051631
species	Natrialba magadii	3	0	13769
species	Haemophilus parainfluenzae	3	0	729
species	Candidatus Amoebophilus asiaticus	3	0	281120
species	Listeria monocytogenes	3	3	1639
species	Treponema pedis	3	0	409322
species	Bacteroides xylanisolvens	3	0	371601
species	Streptococcus infantarius	2	0	102684
species	Paludibacter propionicigenes	2	0	185300
species	Burkholderia phytofirmans	2	0	261302
species	Streptococcus pyogenes	2	0	1314
species	Kribbella flavida	2	0	182640
species	Streptococcus macedonicus	2	0	59310
species	Lactobacillus sanfranciscensis	2	0	1625
species	Alicycliphilus denitrificans	2	0	179636
species	Staphylococcus haemolyticus	2	0	1283
species	Candidatus Endolissoclinum faulkneri	2	0	1263979
species	Pseudomonas mendocina	2	0	300
species	Lactobacillus reuteri	2	0	1598
species	Paenibacillus mucilaginosus	2	0	61624
species	Streptococcus equi	2	0	1336
species	Leptotrichia buccalis	2	0	40542
species	Molluscum contagiosum virus	2	0	10279
species	Parachlamydia acanthamoebae	2	0	83552
species	Candidatus Sulcia muelleri	2	0	336810
species	Streptococcus agalactiae	2	1	1311
species	Trichodesmium erythraeum	2	0	1206
species	Sorangium cellulosum	2	0	56
species	Caldicellulosiruptor saccharolyticus	2	0	44001
species	Streptococcus mutans	2	0	1309
species	Propionibacterium avidum	2	0	33010
species	alpha proteobacterium HIMB59	2	2	744985
species	Streptococcus phage ALQ13.2	2	2	682370
species	Helicobacter cetorum	2	0	138563
species	Helicobacter bizzozeronii	2	0	56877
species	Torque teno virus 27	2	2	687366
species	Sinorhizobium fredii	2	0	380
species	Mycoplasma ovis	2	0	171632
species	Pasteurella multocida	2	0	747
species	Thermodesulfobacterium geofontis	2	0	1295609
species	Histophilus somni	2	2	731
species	Halanaerobium praevalens	2	0	2331
species	Parabacteroides distasonis	2	0	823
species	Methanomethylovorans hollandica	2	0	101192
species	Xanthomonas oryzae	2	2	347
species	Bacteriovorax marinus	2	0	97084
species	Bacillus cereus	2	0	1396
species	Clostridium acidurici	2	0	1556
species	Phaeobacter inhibens	2	0	221822
species	Frog virus 3	2	2	10493
species	Corynebacterium variabile	2	0	1727
species	Streptococcus phage Abc2	1	1	633135
species	Croceibacter atlanticus	1	0	313588
species	Desulfitobacterium hafniense	1	1	49338
species	Bacillus infantis	1	0	324767
species	Achromobacter xylosoxidans	1	1	85698
species	Brachyspira murdochii	1	0	84378
species	Staphylococcus pasteuri	1	0	45972
species	Nonlabens dokdonensis	1	0	328515
species	Torque teno virus 10	1	1	687349
species	Methanococcus voltae	1	0	2188
species	Halovivax ruber	1	0	387341
species	Geobacillus sp. JF8	1	1	1345697
species	Serratia plymuthica	1	0	82996
species	Bdellovibrio bacteriovorus	1	0	959
species	Roseburia hominis	1	0	301301
species	Desulfosporosinus acidiphilus	1	0	885581
species	Neisseria meningitidis	1	1	487
species	Enterococcus casseliflavus	1	0	37734
species	Aliivibrio salmonicida	1	0	40269
species	Corynebacterium halotolerans	1	0	225326
species	Thermodesulfovibrio yellowstonii	1	0	28262
species	Mycobacterium canettii	1	1	78331
species	Polaromonas sp. JS666	1	1	296591
species	Human herpesvirus 7	1	1	10372
species	Dickeya zeae	1	0	204042
species	Pseudomonas poae	1	0	200451
species	Modestobacter marinus	1	1	477641
species	Rickettsia africae	1	0	35788
species	Sideroxydans lithotrophicus	1	0	63745
species	Ornithobacterium rhinotracheale	1	0	28251
species	Microbacterium testaceum	1	0	2033
species	Corynebacterium aurimucosum	1	0	169292
species	Propionibacterium acidipropionici	1	0	1748
species	Mobiluncus curtisii	1	0	2051
species	Gardnerella vaginalis	1	0	2702
species	Salinarchaeum sp. Harcht-Bsk1	1	1	1333523
species	Eubacterium siraeum	1	1	39492
species	Candidatus Koribacter versatilis	1	0	658062
species	Cercopithecine herpesvirus 5	1	1	50292
species	Alteromonas sp. SN2	1	1	715451
species	Abelson murine leukemia virus	1	1	11788
species	Candidatus Liberibacter americanus	1	0	309868
species	Echinicola vietnamensis	1	0	390884
species	Rickettsia slovaca	1	1	35794
species	Torque teno virus 16	1	1	687355
species	Megamonas hypermegale	1	0	158847
species	Streptococcus parauberis	1	0	1348
species	Streptobacillus moniliformis	1	0	34105
species	Finegoldia magna	1	0	1260
species	Proteus mirabilis	1	0	584
species	Allochromatium vinosum	1	0	1049
species	Emiliania huxleyi virus 86	1	1	181082
species	Hyphomicrobium denitrificans	1	0	53399
species	Pelobacter carbinolicus	1	0	19
species	Saccharopolyspora erythraea	1	0	1836
species	Aromatoleum aromaticum	1	0	551760
species	Neisseria gonorrhoeae	1	1	485
species	Candidatus Symbiobacter mobilis	1	0	1436290
species	Ectocarpus siliculosus virus 1	1	1	37665
species	Mamestra configurata nucleopolyhedrovirus A	1	1	207830
species	Eubacterium eligens	1	0	39485
species	Bacillus amyloliquefaciens	1	1	1390
species	Collimonas fungivorans	1	0	158899
species	Pseudomonas brassicacearum	1	0	930166
species	Torque teno virus 8	1	1	687347
species	Nocardia farcinica	1	0	37329
species	Torque teno virus 28	1	1	687367
species	Geobacillus sp. GHH01	1	1	1233873
species	Leptospira biflexa	1	0	172
species	Methylobacterium radiotolerans	1	0	31998
species	Carnobacterium maltaromaticum	1	0	2751
species	Fibrella aestuarina	1	0	651143
species	Pseudomonas protegens	1	1	380021
species	Candidatus Carsonella ruddii	1	0	114186
species	Azospira oryzae	1	0	146939
subspecies	Lactococcus lactis subsp. cremoris	54	0	1359
subspecies	Fusobacterium nucleatum subsp. animalis	31	0	76859
subspecies	Streptococcus constellatus subsp. pharyngis	20	20	184250
subspecies	Fusobacterium nucleatum subsp. vincentii	17	0	155615
subspecies	Caldanaerobacter subterraneus subsp. tengcongensis	11	0	119072
subspecies	Streptococcus dysgalactiae subsp. equisimilis	5	2	119602
subspecies	Fusobacterium nucleatum subsp. nucleatum	5	0	76856
subspecies	Salmonella enterica subsp. enterica	3	0	59201
subspecies	Streptococcus infantarius subsp. infantarius	2	0	150054
subspecies	Streptococcus equi subsp. equi	1	0	148942
subspecies	Bifidobacterium longum subsp. infantis	1	0	1682
subspecies	Pseudomonas brassicacearum subsp. brassicacearum	1	0	86264
subspecies	Streptococcus equi subsp. zooepidemicus	1	1	40041
strain	cellular organisms	8130	20	131567
strain	Prevotella intermedia 17	713	713	246198
strain	Prevotella melaninogenica ATCC 25845	581	581	553174
strain	Prevotella sp. oral taxon 299 str. F0039	550	550	575614
strain	Prevotella denticola F0289	538	538	767031
strain	Veillonella parvula DSM 2008	338	338	479436
strain	Escherichia coli ABU 83972	263	263	655817
strain	Streptococcus parasanguinis FW213	224	224	1114965
strain	Streptococcus salivarius JIM8777	220	220	347253
strain	Streptococcus parasanguinis ATCC 15912	200	200	760570
strain	Streptococcus oralis Uo5	168	168	927666
strain	Atopobium parvulum DSM 20469	149	149	521095
strain	Tannerella forsythia ATCC 43037	126	126	203275
strain	Streptococcus mitis B6	119	119	365659
strain	Streptococcus sanguinis SK36	102	102	388919
strain	Mycoplasma hyopneumoniae J	95	95	262719
strain	Streptococcus salivarius CCHSS3	95	95	1048332
strain	Prevotella dentalis DSM 3688	93	93	908937
strain	Filifactor alocis ATCC 35896	90	90	546269
strain	Streptococcus anginosus C1051	81	81	862970
strain	Streptococcus pseudopneumoniae IS7493	77	77	1054460
strain	Serratia marcescens FGI94	73	73	1249634
strain	Streptococcus salivarius 57.I	57	57	1046629
strain	Bifidobacterium dentium Bd1	54	54	401473
strain	Lactococcus lactis subsp. cremoris A76	54	54	1104322
strain	Streptococcus thermophilus LMD-9	53	53	322159
strain	Streptococcus anginosus C238	51	51	862971
strain	Ralstonia pickettii 12D	46	46	428406
strain	Treponema denticola ATCC 35405	41	41	243275
strain	Fusobacterium nucleatum subsp. animalis 4_8	31	31	469607
strain	Rothia mucilaginosa DY-18	30	30	680646
strain	Odoribacter splanchnicus DSM 220712	29	29	709991
strain	Alistipes shahii WAL 8301	29	29	717959
strain	Mycoplasma hyopneumoniae 232	27	27	295358
strain	Porphyromonas gingivalis W83	27	27	242619
strain	Rothia dentocariosa ATCC 17931	20	20	762948
strain	Ralstonia pickettii 12J	18	18	402626
strain	Cryptobacterium curtum DSM 15641	17	17	469378
strain	Fusobacterium nucleatum subsp. vincentii 3_1_36A2	17	17	469604
strain	Porphyromonas asaccharolytica DSM 20707	16	16	879243
strain	Bacillus thuringiensis MC28	12	12	1195464
strain	Selenomonas sputigena ATCC 35185	12	12	546271
strain	Streptococcus gordonii str. Challis substr. CH1	12	12	467705
strain	Bacteroides salanitronis DSM 18170	12	12	667015
strain	Escherichia coli O157:H7 str. EC4115	12	12	444450
strain	Thermoanaerobacter wiegelii Rt8.B1	12	12	697303
strain	Thermoanaerobacter tengcongensis MB4	11	11	273068
strain	Bacteroides vulgatus ATCC 8482	11	11	435590
strain	Streptococcus oligofermentans AS 1.3089	10	10	1302863
strain	Lawsonia intracellularis N343	10	10	1234378
strain	Mycoplasma hyopneumoniae 7448	9	9	262722
strain	Aeromonas hydrophila ML09-119	8	8	1288394
strain	Streptococcus suis JS14	7	7	945704
strain	Pseudomonas fluorescens A506	7	7	1037911
strain	Methanococcus vannielii SB	7	7	406327
strain	Pseudomonas fluorescens SBW25	7	7	216595
strain	Campylobacter concisus 13826	7	7	360104
strain	Bacteroides helcogenes P 36-108	6	6	693979
strain	Escherichia coli JJ1886	6	6	1355100
strain	Borrelia duttonii Ly	6	6	412419
strain	Streptococcus pneumoniae 670-6B	6	6	189423
strain	Porphyromonas gingivalis ATCC 33277	6	6	431947
strain	Prevotella ruminicola 23	6	6	264731
strain	Pseudomonas putida ND6	6	6	231023
strain	Bacteroides fragilis 638R	5	5	862962
strain	Haemophilus influenzae KR494	5	5	1334187
strain	Streptococcus pneumoniae ATCC 700669	5	5	561276
strain	Fusobacterium nucleatum subsp. nucleatum ATCC 25586	5	5	190304
strain	Streptococcus intermedius C270	5	5	862966
strain	Alistipes finegoldii DSM 17242	5	5	679935
strain	Ochrobactrum anthropi ATCC 49188	4	4	439375
strain	Mycoplasma pulmonis UAB CTIP	4	4	272635
strain	Sulfolobus islandicus M.16.27	4	4	427318
strain	Mycoplasma hyorhinis HUB-1	4	4	872331
strain	Staphylococcus epidermidis ATCC 12228	4	4	176280
strain	Streptococcus intermedius B196	4	4	862967
strain	Pseudomonas putida DOT-T1E	4	4	1196325
strain	Natrialba magadii ATCC 43099	3	3	547559
strain	Bacteroides xylanisolvens XB1A	3	3	657309
strain	Streptococcus pneumoniae Hungary19A-6	3	3	487214
strain	Bacteroides fragilis YCH46	3	3	295405
strain	Natronococcus occultus SP4	3	3	694430
strain	Verminephrobacter eiseniae EF01-2	3	3	391735
strain	Porphyromonas gingivalis TDC60	3	3	1030843
strain	Streptococcus pneumoniae CGSP14	3	3	516950
strain	Solibacillus silvestris StLB046	3	3	1002809
strain	Pseudomonas aeruginosa SCV20265	3	3	1427342
strain	Haemophilus parainfluenzae T3T1	3	3	862965
strain	Salmonella enterica subsp. enterica serovar Newport str. SL254	3	3	423368
strain	Pseudomonas syringae pv. phaseolicola 1448A	3	3	264730
strain	Micrococcus luteus NCTC 2665	3	3	465515
strain	Candidatus Amoebophilus asiaticus 5a2	3	3	452471
strain	Mycoplasma hyopneumoniae 168	3	1	907287
strain	Treponema pedis str. T A4	3	3	1291379
strain	Bacillus cereus E33L	2	2	288681
strain	Sorangium cellulosum So ce56	2	2	448385
strain	Streptococcus pneumoniae G54	2	2	512566
strain	Mycoplasma ovis str. Michigan	2	2	1415773
strain	Helicobacter cetorum MIT 99-5656	2	2	1163745
strain	Methanomethylovorans hollandica DSM 15978	2	2	867904
strain	Streptococcus macedonicus ACA-DC 198	2	2	1116231
strain	Pasteurella multocida 36950	2	2	1075089
strain	Candidatus Endolissoclinum faulkneri L2	2	2	1193729
strain	Propionibacterium avidum 44067	2	2	1170318
strain	Kribbella flavida DSM 17836	2	2	479435
strain	Streptococcus infantarius subsp. infantarius CJ18	2	2	1069533
strain	Burkholderia phytofirmans PsJN	2	2	398527
strain	Alicycliphilus denitrificans K601	2	2	596154
strain	Parachlamydia acanthamoebae UV-7	2	2	765952
strain	Thermodesulfobacterium geofontis OPF15	2	2	795359
strain	Caldicellulosiruptor saccharolyticus DSM 8903	2	2	351627
strain	Corynebacterium variabile DSM 44702	2	2	858619
strain	Streptococcus pyogenes str. Manfredo	2	2	160491
strain	Staphylococcus haemolyticus JCSC1435	2	2	279808
strain	Mycoplasma hyopneumoniae 168-L	2	2	1116211
strain	Candidatus Sulcia muelleri GWSS	2	2	444179
strain	Helicobacter bizzozeronii CIII-1	2	2	1002804
strain	Sinorhizobium fredii HH103	2	2	1117943
strain	Streptococcus mutans LJ23	2	2	1155071
strain	Halanaerobium praevalens DSM 2228	2	2	572479
strain	Bacteriovorax marinus SJ	2	2	862908
strain	Pseudomonas mendocina ymp	2	2	399739
strain	Clostridium difficile 630	2	2	272563
strain	Lactobacillus sanfranciscensis TMW 1.1304	2	2	714313
strain	Parabacteroides distasonis ATCC 8503	2	2	435591
strain	Clostridiales genomosp. BVAB3 str. UPII9-5	2	2	699246
strain	Paludibacter propionicigenes WB4	2	2	694427
strain	Phaeobacter inhibens DSM 17395	2	2	391619
strain	Streptococcus dysgalactiae subsp. equisimilis RE378	2	2	617121
strain	Trichodesmium erythraeum IMS101	2	2	203124
strain	Paenibacillus mucilaginosus K02	2	2	997761
strain	Lactobacillus reuteri SD2112	2	2	491077
strain	Leptotrichia buccalis C-1013-b	2	2	523794
strain	Molluscum contagiosum virus subtype 1	2	2	10280
strain	Clostridium acidurici 9a	2	2	1128398
strain	Escherichia coli Xuzhou21	2	2	741093
strain	Nocardia farcinica IFM 10152	1	1	247156
strain	Candidatus Liberibacter americanus str. Sao Paulo	1	1	1261131
strain	Propionibacterium acnes TypeIA2 P.acn17	1	1	1114967
strain	Staphylococcus epidermidis RP62A	1	1	176279
strain	Candidatus Symbiobacter mobilis CR	1	1	946483
strain	Megamonas hypermegale ART12/1	1	1	657316
strain	Methanococcus voltae A3	1	1	456320
strain	Eubacterium eligens ATCC 27750	1	1	515620
strain	Desulfosporosinus acidiphilus SJ4	1	1	646529
strain	Streptococcus suis ST1	1	1	1004951
strain	Streptococcus agalactiae NEM316	1	1	211110
strain	Aliivibrio salmonicida LFI1238	1	1	316275
strain	Streptococcus pneumoniae 70585	1	1	488221
strain	Streptococcus pneumoniae P1031	1	1	488223
strain	Enterococcus casseliflavus EC20	1	1	565655
strain	Streptococcus thermophilus ND03	1	1	767463
strain	Streptococcus pneumoniae JJA	1	1	488222
strain	Saccharopolyspora erythraea NRRL 2338	1	1	405948
strain	Candidatus Koribacter versatilis Ellin345	1	1	204669
strain	Rickettsia africae ESF-5	1	1	347255
strain	Streptococcus thermophilus LMG 18311	1	1	264199
strain	Streptococcus pneumoniae SPNA45	1	1	869309
strain	Leptospira biflexa serovar Patoc	1	1	145259
strain	Streptococcus suis D12	1	1	1004952
strain	Sideroxydans lithotrophicus ES-1	1	1	580332
strain	Candidatus Carsonella ruddii HC isolate Thao2000	1	1	1202538
strain	Dechlorosoma suillum PS	1	1	640081
strain	Gardnerella vaginalis ATCC 14019	1	1	525284
strain	Pseudomonas poae RE*1-1-14	1	1	1282356
strain	Nonlabens dokdonensis DSW-6	1	1	592029
strain	Corynebacterium aurimucosum ATCC 700975	1	1	548476
strain	Pelobacter carbinolicus DSM 2380	1	1	338963
strain	Streptococcus parauberis KCTC 11537	1	1	936154
strain	Staphylococcus pasteuri SP1	1	1	1276282
strain	Pseudomonas putida H8234	1	1	1331671
strain	Streptococcus thermophilus JIM 8232	1	1	1051074
strain	Haemophilus influenzae PittEE	1	1	374930
strain	Carnobacterium maltaromaticum LMA28	1	1	1234679
strain	Fibrella aestuarina BUZ 2	1	1	1166018
strain	Dickeya zeae Ech1591	1	1	561229
strain	Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088	1	1	391904
strain	Streptococcus equi subsp. equi 4047	1	1	553482
strain	Croceibacter atlanticus HTCC2559	1	1	216432
strain	Streptococcus dysgalactiae subsp. equisimilis AC-2713	1	1	759913
strain	Echinicola vietnamensis DSM 17526	1	1	926556
strain	Mycoplasma hyopneumoniae 7422	1	1	754503
strain	Streptococcus intermedius JTH08	1	1	591365
strain	Microbacterium testaceum StLB037	1	1	979556
strain	Bacillus infantis NRRL B-14911	1	1	1367477
strain	Thermodesulfovibrio yellowstonii DSM 11347	1	1	289376
strain	Aromatoleum aromaticum EbN1	1	1	76114
strain	Ornithobacterium rhinotracheale DSM 15997	1	1	867902
strain	Streptococcus suis 98HAH33	1	1	391296
strain	Methylobacterium radiotolerans JCM 2831	1	1	426355
strain	Brachyspira murdochii DSM 12563	1	1	526224
strain	Streptococcus pneumoniae INV104	1	1	869269
strain	Finegoldia magna ATCC 29328	1	1	334413
strain	Roseburia hominis A2-183	1	1	585394
strain	Serratia plymuthica S13	1	1	1348660
strain	Streptobacillus moniliformis DSM 12112	1	1	519441
strain	Propionibacterium acnes 266	1	1	909952
strain	Haemophilus influenzae F3047	1	1	935897
strain	Pseudomonas brassicacearum subsp. brassicacearum NFM421	1	1	994484
strain	Propionibacterium acidipropionici ATCC 4875	1	1	1171373
strain	Mobiluncus curtisii ATCC 43063	1	1	548479
strain	Halovivax ruber XH-70	1	1	797302
strain	Pseudomonas putida KT2440	1	1	160488
strain	Corynebacterium halotolerans YIM 70093 = DSM 44683	1	1	1121362
strain	Collimonas fungivorans Ter331	1	1	1005048
strain	Proteus mirabilis BB2000	1	1	1266738
strain	Allochromatium vinosum DSM 180	1	1	572477
strain	Streptococcus pneumoniae ST556	1	1	1130804
strain	Hyphomicrobium denitrificans 1NES1	1	1	670307
strain	Bdellovibrio bacteriovorus HD100	1	1	264462
strain	Streptococcus pneumoniae SPN034156	1	1	869303
unclassified	unclassified	247086	247086	0
