LEVEL	TAXA	ROLLUP	ASSIGNED	TAXID
	Actinobacteridae	68005	79	85003
	Coriobacterineae	680	0	255727
	Actinomycineae	104	0	85005
	Mobiluncus/Falcivibrio group	95	0	279916
	Clostridiales genomosp. BVAB3	44	0	699245
	butyrate-producing bacterium SSC/2	37	37	245018
	Methanobacterium sp. AL-21	4	4	868132
	Nudivirus	2	0	483372
	Krokinobacter	1	0	308112
	Clostridium botulinum B str. Eklund 17B	1	1	508765
root	root	1489968	111166	1
superkingdom	Bacteria	1150129	29500	2
superkingdom	Viruses	226253	2	10239
superkingdom	Archaea	1771	0	2157
superphylum	Bacteroidetes/Chlorobi group	29244	57	68336
superphylum	Chlamydiae/Verrucomicrobia group	47	1	51290
superphylum	Fibrobacteres/Acidobacteria group	1	0	131550
phylum	Proteobacteria	931436	15857	1224
phylum	Actinobacteria	68963	0	201174
phylum	Firmicutes	50231	1187	1239
phylum	Bacteroidetes	29182	2659	976
phylum	Tenericutes	25600	0	544448
phylum	Fusobacteria	11703	0	32066
phylum	Spirochaetes	1983	0	203691
phylum	Euryarchaeota	1612	376	28890
phylum	Candidatus Saccharibacteria	415	205	95818
phylum	Cyanobacteria	393	93	1117
phylum	Synergistetes	246	0	508458
phylum	Crenarchaeota	158	0	28889
phylum	Thermodesulfobacteria	136	0	200940
phylum	Dictyoglomi	77	0	68297
phylum	Deinococcus-Thermus	38	0	1297
phylum	Thermotogae	37	0	200918
phylum	Chlamydiae	35	0	204428
phylum	Chloroflexi	34	0	200795
phylum	Aquificae	11	0	200783
phylum	Verrucomicrobia	11	1	74201
phylum	Planctomycetes	9	0	203682
phylum	Deferribacteres	5	0	200930
phylum	Elusimicrobia	4	0	74152
phylum	Chlorobi	4	0	1090
phylum	Chrysiogenetes	3	0	200938
phylum	Nitrospirae	3	0	40117
phylum	Gemmatimonadetes	2	0	142182
phylum	Ignavibacteriae	1	0	1134404
phylum	Acidobacteria	1	0	57723
phylum	Thaumarchaeota	1	0	651137
subphylum	delta/epsilon subdivisions	1476	5	68525
class	Betaproteobacteria	545731	5505	28216
class	Gammaproteobacteria	367702	30591	1236
class	Actinobacteria	68963	277	1760
class	Bacilli	40610	1260	91061
class	Mollicutes	25600	17	31969
class	Bacteroidia	22752	0	200643
class	Fusobacteriia	11703	0	203490
class	Negativicutes	5084	0	909932
class	Flavobacteriia	3448	0	117743
class	Clostridia	3308	128	186801
class	Spirochaetia	1983	0	203692
class	Halobacteria	1095	0	183963
class	Epsilonproteobacteria	946	4	29547
class	Coriobacteridae	680	0	84998
class	Alphaproteobacteria	670	30	28211
class	Deltaproteobacteria	525	17	28221
class	Cytophagia	282	0	768503
class	Synergistia	246	0	649775
class	Thermoprotei	158	0	183924
class	Thermodesulfobacteria	136	0	67799
class	Dictyoglomia	77	0	203486
class	Methanococci	60	0	183939
class	Erysipelotrichia	42	0	526524
class	Methanomicrobia	42	0	224756
class	Methanobacteria	39	0	183925
class	Deinococci	38	0	188787
class	Thermotogae	37	0	188708
class	Sphingobacteriia	36	0	117747
class	Chlamydiia	35	0	204429
class	Chloroflexi	15	1	32061
class	Aquificae	11	0	187857
class	Planctomycetia	8	0	203683
class	Thermomicrobia	8	0	189775
class	Caldilineae	7	0	475962
class	Opitutae	6	0	414999
class	Deferribacteres	5	0	68337
class	Chlorobia	4	0	191410
class	Dehalococcoidia	4	0	301297
class	Chrysiogenetes	3	0	118001
class	Nitrospira	3	0	203693
class	Gloeobacteria	3	0	307596
class	Elusimicrobia	3	0	641853
class	Gemmatimonadetes	2	0	219685
class	Rubrobacteridae	1	0	84995
class	Solibacteres	1	0	332159
class	Ignavibacteria	1	0	795747
class	Phycisphaerae	1	0	666505
subclass	Oscillatoriophycideae	244	0	1301283
subclass	Sphaerobacteridae	6	0	85000
order	Burkholderiales	513030	665	80840
order	Pseudomonadales	205549	144	72274
order	Pasteurellales	97988	0	135625
order	Actinomycetales	67747	6323	2037
order	Nidovirales	64155	0	76804
order	Corynebacterineae	51029	2644	85007
order	Mononegavirales	29332	0	11157
order	Enterobacteriales	28148	0	91347
order	Neisseriales	26540	0	206351
order	Mycoplasmatales	25567	0	2085
order	Lactobacillales	23345	1197	186826
order	Bacteroidales	22752	2032	171549
order	Bacillales	16005	512	1385
order	Fusobacteriales	11703	120	203491
order	Micrococcineae	9164	149	85006
order	Selenomonadales	5084	70	909929
order	Flavobacteriales	3448	197	200644
order	Clostridiales	2855	369	186802
order	Xanthomonadales	2566	0	135614
order	Spirochaetales	1983	28	136
order	Oceanospirillales	1461	9	135619
order	Halobacteriales	1095	0	2235
order	Propionibacterineae	959	0	85009
order	Campylobacterales	936	29	213849
order	Herpesvirales	863	0	548681
order	Coriobacteriales	680	0	84999
order	Picornavirales	567	0	464095
order	Methylophilales	560	0	206350
order	Thermoanaerobacterales	321	1	68295
order	Vibrionales	317	0	135623
order	Rhizobiales	295	37	356
order	Alteromonadales	286	16	135622
order	Cytophagales	282	7	768507
order	Caudovirales	276	0	28883
order	Synergistales	246	0	649776
order	Chromatiales	209	1	135613
order	Bifidobacteriales	179	0	85004
order	Thiotrichales	171	0	72273
order	Legionellales	169	0	118969
order	Myxococcales	160	0	29
order	Chroococcales	151	79	1118
order	Aeromonadales	148	0	135624
order	Bdellovibrionales	137	0	213481
order	Sulfolobales	137	0	2281
order	Thermodesulfobacteriales	136	0	188710
order	Rickettsiales	131	0	766
order	Desulfovibrionales	99	0	213115
order	SAR11 cluster	96	0	54526
order	Oscillatoriales	93	0	1150
order	Dictyoglomales	77	0	203487
order	Desulfuromonadales	75	20	69541
order	Methanococcales	60	0	2182
order	Rhodocyclales	50	0	206389
order	Magnetococcales	49	0	1191478
order	Streptosporangineae	47	1	85012
order	Erysipelotrichales	42	0	526525
order	Methanosarcinales	40	0	94695
order	Methanobacteriales	39	0	2158
order	Nostocales	38	0	1161
order	Thermotogales	37	0	2419
order	Sphingobacteriales	36	0	200666
order	Chlamydiales	35	0	51291
order	Micromonosporineae	32	0	85008
order	Pseudonocardineae	31	0	85010
order	Desulfobacterales	31	0	213118
order	Deinococcales	28	0	118964
order	Kineosporiineae	27	0	622452
order	Rhodospirillales	25	0	204441
order	Frankineae	22	0	85013
order	Methylococcales	22	0	135618
order	Sphingomonadales	21	3	204457
order	Desulfurococcales	21	0	114380
order	Cardiobacteriales	14	0	135615
order	Chloroflexales	14	0	32064
order	Prochlorales	14	0	1212
order	Rhodobacterales	13	0	204455
order	Acholeplasmatales	13	0	186329
order	Acidithiobacillales	13	0	225057
order	Aquificales	11	0	32069
order	Thermales	10	0	68933
order	Planctomycetales	8	0	112
order	Caldilineales	7	0	475963
order	Nautiliales	6	0	235899
order	Puniceicoccales	6	0	415001
order	Sphaerobacterales	6	0	85001
order	Deferribacterales	5	0	191393
order	Caulobacterales	5	0	204458
order	Streptomycineae	5	0	85011
order	Chlorobiales	4	0	191411
order	Methylacidiphilales	4	0	717963
order	Glycomycineae	4	0	85014
order	Parvularculales	4	0	255473
order	Nitrospirales	3	0	189778
order	Chrysiogenales	3	0	189769
order	Hydrogenophilales	3	0	119069
order	Gloeobacterales	3	0	307595
order	Halanaerobiales	3	0	53433
order	Nitrosomonadales	3	0	32003
order	Dehalococcoidales	3	0	1202465
order	Entomoplasmatales	3	0	186328
order	Bacteroidetes Order II. Incertae sedis	3	0	1100069
order	Elusimicrobiales	3	0	641854
order	Methanomicrobiales	2	0	2191
order	Thermomicrobiales	2	0	189776
order	Syntrophobacterales	2	0	213462
order	Gemmatimonadales	2	0	219686
order	Phycisphaerales	1	0	666506
order	Rubrobacterales	1	0	84996
order	Solibacterales	1	0	332160
order	Natranaerobiales	1	0	485256
order	Nitrososphaerales	1	0	1033996
order	Pleurocapsales	1	0	52604
order	Gallionellales	1	0	713636
order	Ignavibacteriales	1	1	795748
suborder	Sorangiineae	104	0	80812
suborder	Nannocystineae	50	0	224462
suborder	Sphaerobacterineae	6	0	255728
suborder	Cystobacterineae	6	1	80811
suborder	Rubrobacterineae	1	0	255725
family	Alcaligenaceae	510111	281	506
family	Moraxellaceae	199752	16789	468
family	Microviridae	116632	0	10841
family	Pasteurellaceae	97988	30411	712
family	Coronaviridae	64155	0	11118
family	Corynebacteriaceae	47433	0	1653
family	Paramyxoviridae	29332	0	11158
family	Enterobacteriaceae	28148	18645	543
family	Neisseriaceae	26540	2334	481
family	Mycoplasmataceae	25567	0	2092
family	Streptococcaceae	14642	305	1300
family	Staphylococcaceae	13386	1018	90964
family	Prevotellaceae	12429	0	171552
family	Fusobacteriaceae	10380	40	203492
family	Micrococcaceae	7959	318	1268
family	Porphyromonadaceae	7205	889	171551
family	Polydnaviridae	6599	3438	10482
family	Lactobacillaceae	6118	106	33958
family	Pseudomonadaceae	5653	341	135621
family	Veillonellaceae	4988	63	31977
family	Virgaviridae	3523	0	675071
family	Flavobacteriaceae	3179	376	49546
family	Xanthomonadaceae	2566	683	32033
family	Spirochaetaceae	1930	56	137
family	Orthomyxoviridae	1890	0	11308
family	Bacillaceae	1736	150	186817
family	Enterococcaceae	1378	6	81852
family	Hahellaceae	1334	0	224379
family	Leptotrichiaceae	1203	324	1129771
family	Oxalobacteraceae	1172	642	75682
family	Clostridiales Family XI. Incertae Sedis	1141	300	543310
family	Halobacteriaceae	1095	0	2236
family	Baculoviridae	1014	0	10442
family	Mycobacteriaceae	944	1	1762
family	Propionibacteriaceae	921	3	31957
family	Bacteroidaceae	788	0	815
family	Potyviridae	782	0	39729
family	Campylobacteraceae	738	54	72294
family	Burkholderiaceae	716	21	119060
family	Coriobacteriaceae	680	130	84107
family	Herpesviridae	563	9	10292
family	Secoviridae	560	0	675072
family	Methylophilaceae	560	5	32011
family	Clostridiaceae	457	2	31979
family	Comamonadaceae	354	22	80864
family	Phycodnaviridae	343	0	10501
family	Vibrionaceae	317	28	641
family	Alloherpesviridae	300	0	548682
family	Podoviridae	271	0	10744
family	Peptostreptococcaceae	270	0	186804
family	Cytophagaceae	259	1	89373
family	Synergistaceae	246	0	649777
family	Thermoanaerobacteraceae	226	0	186814
family	Ectothiorhodospiraceae	193	97	72276
family	Lachnospiraceae	192	0	186803
family	Eubacteriaceae	192	0	186806
family	Bifidobacteriaceae	179	0	31953
family	Helicobacteraceae	169	0	72293
family	Legionellaceae	158	0	444
family	Rhizobiaceae	158	0	82115
family	Shewanellaceae	156	0	267890
family	Piscirickettsiaceae	149	27	135616
family	Aeromonadaceae	148	3	84642
family	Sulfolobaceae	137	0	118883
family	Thermodesulfobacteriaceae	136	3	188711
family	Bdellovibrionaceae	135	0	213483
family	Listeriaceae	129	0	186820
family	Paenibacillaceae	121	0	186822
family	Rickettsiaceae	120	0	775
family	Actinomycetaceae	104	0	2049
family	Polyangiaceae	104	0	49
family	Thermoanaerobacterales Family III. Incertae Sedis	92	8	543371
family	Iridoviridae	90	0	10486
family	Dictyoglomaceae	77	0	203488
family	Psychromonadaceae	70	0	267894
family	Halomonadaceae	66	0	28256
family	Methanococcaceae	58	0	2183
family	Ruminococcaceae	56	1	541000
family	Inoviridae	54	0	10860
family	Jonesiaceae	53	0	85022
family	Desulfohalobiaceae	53	0	213117
family	Kofleriaceae	50	0	224464
family	Poxviridae	50	0	10240
family	Rhodocyclaceae	50	0	75787
family	Magnetococcaceae	49	0	1191479
family	Desulfovibrionaceae	46	0	194924
family	Erysipelotrichaceae	42	0	128827
family	Pelobacteraceae	41	0	213423
family	Oscillospiraceae	40	0	216572
family	Nocardiopsaceae	39	33	83676
family	Peptococcaceae	39	0	186807
family	Rikenellaceae	39	0	171550
family	Alcanivoracaceae	39	0	224372
family	Nocardioidaceae	38	0	85015
family	Brucellaceae	38	0	118882
family	Thermotogaceae	37	5	188709
family	Nimaviridae	37	0	196937
family	Cryomorphaceae	35	0	246874
family	Alteromonadaceae	35	0	72275
family	Micromonosporaceae	32	15	28056
family	Parachlamydiaceae	32	0	92713
family	Pseudonocardiaceae	31	0	2070
family	Methanosarcinaceae	29	0	2206
family	Desulfobacteraceae	29	7	213119
family	Nostocaceae	29	0	1162
family	Kineosporiaceae	27	0	83778
family	Deinococcaceae	26	0	183710
family	Acidaminococcaceae	26	0	909930
family	Sanguibacteraceae	23	0	145360
family	Sphingobacteriaceae	23	0	84566
family	Francisellaceae	22	0	34064
family	Methanobacteriaceae	22	0	2159
family	Methylococcaceae	22	0	403
family	Bradyrhizobiaceae	20	0	41294
family	Cellulomonadaceae	20	0	85016
family	Blattabacteriaceae	20	0	39782
family	Pyrodictiaceae	20	0	2307
family	Leptospiraceae	19	0	170
family	Acidothermaceae	18	0	85032
family	Sphingomonadaceae	18	0	41297
family	Methanothermaceae	17	0	2178
family	Acetobacteraceae	16	0	433
family	Heliobacteriaceae	16	0	31984
family	Methylobacteriaceae	15	0	119045
family	Flammeovirgaceae	14	0	200667
family	Cardiobacteriaceae	14	0	868
family	Geobacteraceae	14	0	213422
family	Prochlorococcaceae	14	0	1217
family	Chromatiaceae	14	4	1046
family	Chloroflexaceae	14	0	1106
family	Acholeplasmataceae	13	4	2146
family	Acidithiobacillaceae	13	0	225058
family	Oceanospirillaceae	13	0	135620
family	Saprospiraceae	12	0	89374
family	Coxiellaceae	11	0	118968
family	Rhodobacteraceae	11	11	31989
family	Methanosaetaceae	11	0	143067
family	Thermaceae	10	0	188786
family	Anaplasmataceae	10	0	942
family	Closteroviridae	9	0	69973
family	Rhodospirillaceae	9	0	41295
family	Beijerinckiaceae	9	0	45404
family	Rivulariaceae	9	0	1185
family	Hydrogenothermaceae	8	0	224027
family	Planctomycetaceae	8	2	126
family	Picornaviridae	7	0	12058
family	Caldilineaceae	7	0	475964
family	Brachyspiraceae	6	0	143786
family	Nautiliaceae	6	0	224467
family	Puniceicoccaceae	6	0	415002
family	Sphaerobacteraceae	6	0	85002
family	Streptomycetaceae	5	0	2062
family	Deferribacteraceae	5	3	191394
family	Leuconostocaceae	5	0	81850
family	Caulobacteraceae	5	0	76892
family	Lipothrixviridae	5	0	10477
family	Glycomycetaceae	4	0	85034
family	Chlorobiaceae	4	2	191412
family	Myxococcaceae	4	0	31
family	Bartonellaceae	4	0	772
family	Parvularculaceae	4	0	255474
family	Colwelliaceae	4	0	267889
family	Nocardiaceae	4	0	85025
family	Thermomonosporaceae	4	0	2012
family	Methylacidiphilaceae	4	0	717964
family	Rhodothermaceae	3	0	563843
family	Microbacteriaceae	3	2	85023
family	Xanthobacteraceae	3	2	335928
family	Streptosporangiaceae	3	0	2004
family	Dehalococcoidaceae	3	0	1202464
family	Aerococcaceae	3	0	186827
family	Elusimicrobiaceae	3	0	641876
family	Nitrospiraceae	3	0	189779
family	Hydrogenophilaceae	3	0	206349
family	Nitrosomonadaceae	3	0	206379
family	Siphoviridae	3	0	10699
family	Chrysiogenaceae	3	0	189770
family	Halanaerobiaceae	3	0	972
family	Aquificaceae	3	0	64898
family	Chlamydiaceae	3	0	809
family	Alicyclobacillaceae	3	0	186823
family	Spiroplasmataceae	2	0	2131
family	Hyphomonadaceae	2	0	69657
family	Gemmatimonadaceae	2	0	219687
family	Frankiaceae	2	0	74712
family	Segniliparaceae	2	0	316606
family	Desulfobulbaceae	2	1	213121
family	Carnobacteriaceae	2	0	186828
family	Ascoviridae	2	0	43682
family	Trueperaceae	2	0	332247
family	Tsukamurellaceae	2	0	85028
family	Methanocaldococcaceae	2	0	196117
family	Bacteriovoracaceae	2	0	263369
family	Thermomicrobiaceae	2	0	189777
family	Hyphomicrobiaceae	2	0	45401
family	Cyclobacteriaceae	2	0	563798
family	Clostridiales Family XVII. Incertae Sedis	2	0	539000
family	Thermodesulfobiaceae	2	0	227387
family	Myoviridae	2	0	10662
family	Methanoregulaceae	2	0	1198451
family	Pseudoalteromonadaceae	1	0	267888
family	Planococcaceae	1	0	186818
family	Beutenbergiaceae	1	0	125316
family	Halothiobacillaceae	1	0	255526
family	Candidatus Midichloriaceae	1	0	1328881
family	Solibacteraceae	1	0	332161
family	Natranaerobiaceae	1	0	485255
family	Dermacoccaceae	1	0	145357
family	Syntrophobacteraceae	1	0	213465
family	Nitrososphaeraceae	1	0	1033997
family	Gallionellaceae	1	0	90627
family	Chitinophagaceae	1	1	563835
family	Methylocystaceae	1	0	31993
family	Cystobacteraceae	1	0	39
family	Rubrobacteraceae	1	0	84997
family	Entomoplasmataceae	1	0	33925
family	Nakamurellaceae	1	0	85031
family	Syntrophaceae	1	0	213468
family	Phycisphaeraceae	1	0	666507
family	Reoviridae	1	0	10880
family	Geodermatophilaceae	1	0	85030
family	Desulfurococcaceae	1	0	2272
family	Ferrimonadaceae	1	0	267892
family	Flaviviridae	1	0	11050
subfamily	Coronavirinae	64155	123	693995
subfamily	Paramyxovirinae	24977	0	11159
subfamily	Pneumovirinae	4355	0	11244
subfamily	Comovirinae	560	0	675075
subfamily	Alphaherpesvirinae	469	0	10293
subfamily	Autographivirinae	271	0	542835
subfamily	Betaherpesvirinae	83	0	10357
subfamily	Chordopoxvirinae	50	0	10241
subfamily	Azotobacter group	7	0	351
subfamily	Gammaherpesvirinae	2	0	10374
subfamily	Spounavirinae	2	0	857473
subfamily	Sedoreovirinae	1	0	689832
tribe	Rickettsieae	120	0	33988
genus	Achromobacter	509635	0	222
genus	Moraxella	157087	0	475
genus	Microvirus	116632	150	10842
genus	Haemophilus	64991	2130	724
genus	Alphacoronavirus	63869	0	693996
genus	Corynebacterium	47433	16776	1716
genus	Mycoplasma	25563	6516	2093
genus	Acinetobacter	25310	15329	469
genus	Respirovirus	24942	50	186938
genus	Neisseria	24009	10276	482
genus	Streptococcus	14200	10103	1301
genus	Prevotella	12429	4459	838
genus	Staphylococcus	12363	5390	1279
genus	Fusobacterium	10312	0	848
genus	Rothia	7557	798	32207
genus	Lactobacillus	6010	2545	1578
genus	Pseudomonas	5291	1877	286
genus	Porphyromonas	4766	921	836
genus	Veillonella	4748	0	29465
genus	Serratia	4735	1	613
genus	Pneumovirus	4337	1	11245
genus	Tobamovirus	3523	1	12234
genus	Ichnovirus	3154	2	10483
genus	Capnocytophaga	2747	61	1016
genus	Stenotrophomonas	1702	0	40323
genus	Escherichia	1701	2	561
genus	Treponema	1688	604	157
genus	Influenzavirus A	1555	0	197911
genus	Bacillus	1544	2	1386
genus	Actinobacillus	1502	308	713
genus	Tannerella	1428	0	195950
genus	Enterococcus	1369	1317	1350
genus	Hahella	1334	0	158481
genus	Tropheryma	955	0	2038
genus	Mycobacterium	943	17	1763
genus	Propionibacterium	917	12	1743
genus	Alphabaculovirus	911	0	558016
genus	Bacteroides	788	179	816
genus	Potyvirus	782	0	12195
genus	Campylobacter	674	126	194
genus	Burkholderia	657	349	32008
genus	Psychrobacter	566	517	497
genus	Comovirus	560	0	12258
genus	Methylovorus	554	554	81682
genus	Aggregatibacter	539	46	416916
genus	Proteus	529	0	583
genus	Natronococcus	507	0	29287
genus	Providencia	464	0	586
genus	Clostridium	453	250	1485
genus	Simplexvirus	453	0	10294
genus	Atopobium	448	0	1380
genus	Anaerococcus	446	0	165779
genus	Morganella	422	0	581
genus	Finegoldia	395	0	150022
genus	Streptobacillus	393	0	34104
genus	Leptotrichia	341	0	32067
genus	Influenzavirus B	335	0	197912
genus	Salinarchaeum	309	0	1269201
genus	Vibrio	282	208	662
genus	Verminephrobacter	282	0	364316
genus	Enterobacter	279	6	547
genus	T7likevirus	271	0	110456
genus	Candidatus Azobacteroides	259	0	511434
genus	Fibrella	251	0	861914
genus	Ictalurivirus	249	0	172653
genus	Janthinobacterium	248	0	29580
genus	Filifactor	236	0	44259
genus	Phaeovirus	227	0	181085
genus	Pantoea	224	182	53335
genus	Klebsiella	205	60	570
genus	Eubacterium	192	0	1730
genus	Thermanaerovibrio	189	0	81461
genus	Taylorella	188	0	29574
genus	Pseudogulbenkiania	183	0	568394
genus	Buchnera	177	0	32199
genus	Halovivax	174	0	332951
genus	Collimonas	173	0	202907
genus	Mannheimia	165	0	75984
genus	Betacoronavirus	163	0	694002
genus	Helicobacter	162	0	209
genus	Thermoanaerobacter	162	1	1754
genus	Legionella	158	42	445
genus	Butyrivibrio	158	0	830
genus	Shewanella	156	129	22
genus	Candidatus Saccharimonas	150	0	1331051
genus	Sebaldella	145	0	32068
genus	Salmonella	139	0	590
genus	Aeromonas	138	5	642
genus	Lactococcus	137	5	1357
genus	Sulfolobus	137	0	2284
genus	Histophilus	135	0	214906
genus	Bdellovibrio	135	1	958
genus	Thermodesulfobacterium	131	0	1740
genus	Listeria	129	10	1637
genus	Xanthomonas	123	11	338
genus	Parabacteroides	121	0	375288
genus	Paenibacillus	120	0	44249
genus	Wigglesworthia	119	0	51228
genus	Borrelia	118	0	138
genus	Exiguobacterium	117	2	33986
genus	Thiomicrospira	109	0	933
genus	Sorangium	104	0	39643
genus	Betabaculovirus	103	0	558017
genus	Natrialba	102	0	63742
genus	Herminiimonas	101	0	303379
genus	Bifidobacterium	100	82	1678
genus	Olsenella	98	0	133925
genus	Selenomonas	97	58	970
genus	Mobiluncus	95	0	2050
genus	Coccolithovirus	94	0	346673
genus	Ranavirus	88	0	10492
genus	Rickettsia	83	0	780
genus	Alkalilimnicola	81	0	133193
genus	Gardnerella	79	0	2701
genus	Dictyoglomus	77	77	13
genus	Candidatus Liberibacter	76	3	34019
genus	Shigella	71	4	620
genus	Psychromonas	70	5	67572
genus	Pasteurella	67	0	745
genus	Candidatus Blochmannia	67	44	203804
genus	Basfia	63	0	697331
genus	Muromegalovirus	62	0	10365
genus	Photorhabdus	60	47	29487
genus	Yersinia	59	26	629
genus	Candidatus Portiera	58	0	235572
genus	Bibersteinia	58	0	476528
genus	Methanococcus	57	0	2184
genus	Gallibacterium	57	0	155493
genus	Sinorhizobium	56	0	28105
genus	Sphaerochaeta	55	0	399320
genus	Inovirus	54	0	10861
genus	Jonesia	53	0	43673
genus	Ruminococcus	53	0	1263
genus	Desulfohalobium	53	0	45662
genus	Aminobacterium	52	0	81466
genus	Cyprinivirus	51	0	692606
genus	Haliangium	50	0	162027
genus	Thauera	49	0	33057
genus	Magnetococcus	49	0	162171
genus	Caldanaerobacter	48	0	249529
genus	Micrococcus	46	0	1269
genus	Crinalium	45	0	241421
genus	Oscillatoria	44	42	1158
genus	Megamonas	43	0	158846
genus	Pelobacter	41	0	18
genus	Oscillibacter	40	0	459786
genus	Alistipes	39	1	239759
genus	Citrobacter	39	0	544
genus	Ochrobactrum	38	0	528
genus	Arthrobacter	38	2	1663
genus	Orientia	37	0	69474
genus	Thermoanaerobacterium	37	0	28895
genus	Whispovirus	37	0	249585
genus	Synechococcus	37	37	1129
genus	Megasphaera	37	0	906
genus	Rubulavirus	35	0	39744
genus	Flavobacterium	35	0	237
genus	Geobacillus	34	2	129337
genus	Candidatus Carsonella	34	0	114185
genus	Orthopoxvirus	33	19	10242
genus	Owenweeksia	33	0	267986
genus	Parachlamydia	32	0	83551
genus	Kribbella	31	0	182639
genus	Marinitoga	31	0	160798
genus	Caldicellulosiruptor	31	0	44000
genus	Lawsonia	31	0	41707
genus	Polaromonas	30	30	52972
genus	Erysipelothrix	29	0	1647
genus	Desulfotomaculum	29	23	1562
genus	Candidatus Atelocyanobacterium	29	0	1453359
genus	Methanosarcina	29	0	2207
genus	Ilyobacter	28	0	167639
genus	Xylella	28	0	2370
genus	Kineococcus	27	0	33981
genus	Alcanivorax	27	22	59753
genus	Candidatus Riesia	27	0	401618
genus	Acidaminococcus	26	1	904
genus	Dickeya	26	0	204037
genus	Deinococcus	26	26	1298
genus	Saccharomonospora	25	0	1851
genus	Rhizobium	25	0	379
genus	Cupriavidus	24	1	106589
genus	Erwinia	24	0	551
genus	Roseburia	23	22	841
genus	Kinetoplastibacterium	23	21	33055
genus	Sanguibacter	23	0	60919
genus	Francisella	22	6	262
genus	Chlorovirus	22	21	181083
genus	Pseudoxanthomonas	22	0	83618
genus	Anabaena	21	0	1163
genus	Blattabacterium	20	7	34098
genus	Desulfococcus	20	0	896
genus	Pyrolobus	20	0	54251
genus	Cellulomonas	20	20	1707
genus	Pectobacterium	20	0	122277
genus	Leptospira	19	15	171
genus	Methanobrevibacter	18	0	2172
genus	Metapneumovirus	18	0	162387
genus	Acidothermus	18	0	28048
genus	Candidatus Sulcia	17	0	336809
genus	Methanothermus	17	0	2179
genus	Molluscipoxvirus	16	0	10278
genus	Thermosediminibacter	16	0	291988
genus	Heliobacterium	16	0	2697
genus	Salinispora	16	16	168694
genus	Glaciecola	15	0	89404
genus	Acetobacter	15	0	434
genus	Rhodopseudomonas	15	0	1073
genus	Mardivirus	15	0	180252
genus	Methylobacterium	15	0	407
genus	Desulfovibrio	15	9	872
genus	Pedobacter	14	0	84567
genus	Prochlorococcus	14	0	1218
genus	Dichelobacter	14	0	869
genus	Candidatus Hamiltonella	14	0	568987
genus	Alteromonas	14	0	226
genus	Cellvibrio	14	0	10
genus	Geobacter	14	0	28231
genus	Laribacter	14	0	168470
genus	Marivirga	14	0	869806
genus	Chloroflexus	13	13	1107
genus	Ralstonia	13	0	48736
genus	Methylomicrobium	13	0	39773
genus	Spirochaeta	13	0	146
genus	Acidithiobacillus	13	0	119977
genus	Kangiella	12	0	261963
genus	Shimwellia	12	0	1335483
genus	Sodalis	12	0	84565
genus	Haliscomenobacter	12	0	2349
genus	Candidatus Moranella	12	0	1048757
genus	Xenorhabdus	11	1	626
genus	Roseolovirus	11	0	40272
genus	Methanosaeta	11	0	2222
genus	Coxiella	11	0	776
genus	Sphingomonas	11	11	13687
genus	Cytomegalovirus	10	0	10358
genus	Marinomonas	10	1	28253
genus	Coprococcus	10	0	33042
genus	Solitalea	9	0	929509
genus	Crinivirus	9	0	67753
genus	Arcanobacterium	9	0	28263
genus	Arcobacter	9	0	28196
genus	Methylococcus	9	0	413
genus	Candidatus Tremblaya	9	0	189384
genus	Frateuria	8	0	70411
genus	Trichormus	8	0	264688
genus	Candidatus Symbiobacter	8	0	1436289
genus	Edwardsiella	8	1	635
genus	Candidatus Hodgkinia	8	0	573657
genus	Desulfitobacterium	8	0	36853
genus	Rubrivivax	7	0	28067
genus	Calothrix	7	0	1186
genus	Bracovirus	7	0	10485
genus	Persephonella	7	0	182899
genus	Enterovirus	7	0	12059
genus	Moorella	7	0	44260
genus	Oceanimonas	7	0	129577
genus	Caldilinea	7	0	233191
genus	Nocardioides	7	0	1839
genus	Azotobacter	7	0	352
genus	Candidatus Zinderia	6	0	884214
genus	Sphaerobacter	6	0	2056
genus	Coraliomargarita	6	0	442430
genus	Beijerinckia	6	0	532
genus	Nocardiopsis	6	6	2013
genus	Marinobacter	6	4	2742
genus	Nautilia	6	0	191291
genus	Brachyspira	6	2	29521
genus	Candidatus Profftella	5	0	1381133
genus	Ramlibacter	5	0	174951
genus	Ehrlichia	5	0	943
genus	Streptomyces	5	0	1883
genus	Magnetospirillum	5	0	13134
genus	Anaerobaculum	5	0	46613
genus	Macrococcus	5	0	69965
genus	Meiothermus	5	0	65551
genus	Spiribacter	5	0	1335745
genus	Amphibacillus	5	0	29331
genus	Thioalkalivibrio	5	1	106633
genus	Thioalkalimicrobium	5	0	92244
genus	Nitrosococcus	5	2	1227
genus	Acholeplasma	5	0	2147
genus	Halorhodospira	5	0	85108
genus	Chromohalobacter	5	0	42054
genus	Aliivibrio	5	0	511678
genus	Pirellula	4	0	123
genus	Sphingobium	4	4	165695
genus	Pusillimonas	4	0	305976
genus	Stackebrandtia	4	0	283810
genus	Cronobacter	4	0	413496
genus	Anaeromyxobacter	4	0	161492
genus	Parvularcula	4	0	208215
genus	Methylacidiphilum	4	0	511745
genus	Sulfuricurvum	4	4	286130
genus	Methanobacterium	4	0	2160
genus	Carboxydothermus	4	0	129957
genus	Ureaplasma	4	2	2129
genus	Delftia	4	1	80865
genus	Candidatus Phytoplasma	4	1	33926
genus	Bartonella	4	3	773
genus	Methylophaga	4	3	40222
genus	Thermomonospora	4	0	2019
genus	Thermus	4	2	270
genus	Rhodococcus	4	0	1827
genus	Cycloclasticus	4	4	34067
genus	Betalipothrixvirus	4	0	341940
genus	Colwellia	4	0	28228
genus	Wolinella	3	0	843
genus	Elusimicrobium	3	0	423604
genus	Gramella	3	0	292691
genus	Teredinibacter	3	0	2425
genus	Desulfurispirillum	3	0	393029
genus	Thermobaculum	3	0	262406
genus	Aerococcus	3	0	1375
genus	Caulobacter	3	0	75
genus	Rahnella	3	2	34037
genus	Thiobacillus	3	0	919
genus	Thermobispora	3	0	147067
genus	Bordetella	3	1	517
genus	Robiginitalea	3	0	252306
genus	Oenococcus	3	0	46254
genus	Geitlerinema	3	0	63132
genus	Saccharopolyspora	3	0	1835
genus	Streptosporangium	3	0	2000
genus	Gloeobacter	3	2	33071
genus	Halomonas	3	0	2745
genus	Thalassolituus	3	0	187492
genus	Zymomonas	3	0	541
genus	Chlamydia	3	0	810
genus	Halanaerobium	3	2	2330
genus	Anaplasma	3	0	768
genus	Methylocella	3	0	120652
genus	Tepidanaerobacter	3	0	499228
genus	Nitrobacter	3	0	911
genus	Psychroflexus	3	0	83612
genus	Dehalococcoides	3	0	61434
genus	Alicyclobacillus	3	0	29330
genus	Thioflavicoccus	3	0	156885
genus	Segniliparus	2	0	286801
genus	Riemerella	2	0	34084
genus	Rhodothermus	2	0	29548
genus	Ascovirus	2	0	43680
genus	Haloquadratum	2	0	293431
genus	Thiocystis	2	0	13724
genus	Simiduia	2	0	447467
genus	Croceibacter	2	0	216431
genus	Methanoregula	2	0	395331
genus	Candidatus Cardinium	2	0	273135
genus	Fluviicola	2	0	332102
genus	Azospirillum	2	1	191
genus	Tsukamurella	2	0	2060
genus	Acidovorax	2	2	12916
genus	Herbaspirillum	2	0	963
genus	Thermodesulfatator	2	0	241192
genus	Bacteriovorax	2	0	146784
genus	Nitrospira	2	0	1234
genus	Thermodesulfobium	2	0	227388
genus	Sulfobacillus	2	0	28033
genus	Coriobacterium	2	0	33870
genus	Anoxybacillus	2	0	150247
genus	Rivularia	2	0	373984
genus	Pediococcus	2	0	1253
genus	Tetragenococcus	2	0	51668
genus	Thermomicrobium	2	0	499
genus	Neorickettsia	2	2	33993
genus	Frankia	2	1	1854
genus	Chamaesiphon	2	0	217161
genus	Photobacterium	2	0	657
genus	Bradyrhizobium	2	0	374
genus	Spounalikevirus	2	0	140409
genus	Rhodomicrobium	2	0	1068
genus	Truepera	2	0	332248
genus	Carnobacterium	2	0	2747
genus	Spiroplasma	2	0	2132
genus	Iridovirus	2	0	10487
genus	Gemmatimonas	2	0	173479
genus	Weeksella	2	0	1013
genus	Macavirus	2	0	548687
genus	Runella	2	0	105
genus	Flexibacter	2	0	992
genus	Alkaliphilus	2	0	114627
genus	Nitrosospira	2	0	35798
genus	Dyadobacter	2	0	120831
genus	Aquifex	2	0	2713
genus	Candidatus Puniceispirillum	1	0	767891
genus	Methanotorris	1	0	196119
genus	Raoultella	1	0	160674
genus	Orbivirus	1	0	10892
genus	Leptospirillum	1	1	179
genus	Acidiphilium	1	0	522
genus	Leuconostoc	1	0	1243
genus	Clavibacter	1	0	1573
genus	Salinibacter	1	0	146918
genus	Avipoxvirus	1	0	10260
genus	Candidatus Solibacter	1	0	332162
genus	Methanocaldococcus	1	0	196118
genus	Varicellovirus	1	0	10319
genus	Cyanobium	1	0	167375
genus	Maricaulis	1	0	74317
genus	Roseiflexus	1	1	120961
genus	Chlorobaculum	1	0	256319
genus	Blautia	1	0	572511
genus	Singulisphaera	1	0	466152
genus	Methylocystis	1	0	133
genus	Melissococcus	1	0	33969
genus	Aromatoleum	1	0	551759
genus	Ferrimonas	1	0	44011
genus	Nitrososphaera	1	0	497726
genus	Mesotoga	1	0	1184396
genus	Dehalogenimonas	1	0	670486
genus	Gammalipothrixvirus	1	0	341941
genus	Ammonifex	1	0	42837
genus	Actinoplanes	1	1	1865
genus	Desulfatibacillum	1	0	218207
genus	Nitrosomonas	1	0	914
genus	Flavivirus	1	0	11051
genus	Paludibacter	1	0	346096
genus	Stigmatella	1	0	40
genus	Hydrogenobaculum	1	1	168657
genus	Leptolyngbya	1	0	47251
genus	Candidatus Accumulibacter	1	0	327159
genus	Weissella	1	0	46255
genus	Candidatus Desulforudis	1	0	471826
genus	Faecalibacterium	1	0	216851
genus	Pseudoalteromonas	1	0	53246
genus	Phenylobacterium	1	0	20
genus	Planctomyces	1	1	118
genus	Emticicia	1	0	312278
genus	Kytococcus	1	0	57499
genus	Thiomonas	1	1	32012
genus	Eggerthella	1	0	84111
genus	Sulfurihydrogenibium	1	0	212790
genus	Cyanothece	1	0	43988
genus	Starkeya	1	0	152053
genus	Sulfurospirillum	1	0	57665
genus	Solibacillus	1	0	648800
genus	Methanothermococcus	1	0	155862
genus	Polaribacter	1	0	52959
genus	Chlorobium	1	0	1091
genus	Cyclobacterium	1	0	68288
genus	Methylotenera	1	0	359407
genus	Syntrophus	1	0	43773
genus	Brevibacillus	1	0	55080
genus	Flexistipes	1	0	2351
genus	Syntrophobacter	1	0	29526
genus	Rubrobacter	1	0	42255
genus	Nakamurella	1	0	53460
genus	Marinithermus	1	0	186191
genus	Calditerrivibrio	1	0	545865
genus	Mesoplasma	1	0	46239
genus	Natranaerobius	1	0	375928
genus	Comamonas	1	0	283
genus	Desulfobacula	1	0	28222
genus	Phycisphaera	1	0	666508
genus	Nonlabens	1	0	363408
genus	Gallionella	1	0	96
genus	Rhodospirillum	1	0	1081
genus	Halobacillus	1	0	45667
genus	Pandoraea	1	0	93217
genus	Geodermatophilus	1	0	1860
genus	Candidatus Midichloria	1	0	411566
genus	Thermacetogenium	1	0	140458
genus	Cellulophaga	1	0	104264
genus	Candidatus Nasuia	1	0	1301080
genus	Gordonibacter	1	0	644652
genus	Candidatus Endolissoclinum	1	0	1263978
genus	Beutenbergia	1	0	84756
genus	Gloeocapsa	1	0	102231
genus	Hyphomonas	1	0	85
genus	Natronobacterium	1	0	2256
genus	Staphylothermus	1	0	2279
genus	Methylibium	1	0	316612
genus	Microcystis	1	0	1125
genus	Asticcacaulis	1	0	76890
genus	Desulfurivibrio	1	0	427922
genus	Echinicola	1	0	390846
genus	Halothiobacillus	1	0	109262
genus	Stanieria	1	0	102115
genus	Thermincola	1	0	278993
genus	Microlunatus	1	0	29404
subgenus	Branhamella	157087	0	46226
subgenus	mosquito-borne viruses	1	0	59562
species group	Acinetobacter calcoaceticus/baumannii complex	9935	279	909768
species group	Pseudomonas aeruginosa group	3069	472	136841
species group	Bacillus cereus group	1439	43	86661
species group	Mycobacterium chelonae group	910	0	670516
species group	Enterobacter cloacae complex	266	10	354276
species group	Pseudomonas fluorescens group	194	56	136843
species group	pseudomallei group	189	0	111527
species group	Burkholderia cepacia complex	118	64	87882
species group	Streptococcus anginosus group	105	11	671232
species group	spotted fever group	83	0	114277
species group	Pseudomonas putida group	57	1	136845
species group	Pseudomonas pertucinogena group	36	0	136844
species group	Pseudomonas syringae group	34	0	136849
species group	Streptococcus dysgalactiae group	27	0	119603
species group	Pseudomonas stutzeri group	19	0	136846
species group	Bacillus subtilis group	15	0	653685
species group	Lactobacillus casei group	8	1	655183
species group	Vibrio harveyi group	7	0	717610
species group	Borrelia burgdorferi group	5	0	64895
species group	canis group	5	3	106178
species group	Mycobacterium tuberculosis complex	4	0	77643
species group	16SrX (Apple proliferation group)	2	0	85630
species group	Mycoplasma mycoides group	2	0	656088
species group	16SrXII (Stolbur group)	1	0	85632
species subgroup	Mycobacterium abscessus subgroup	910	0	670506
species subgroup	Pseudomonas syringae group genomosp. 2	33	0	251698
species subgroup	Pseudomonas stutzeri subgroup	19	0	578833
species subgroup	Pseudomonas syringae group genomosp. 1	1	0	251695
species	Achromobacter xylosoxidans	509635	376	85698
species	Moraxella catarrhalis	157087	0	480
species	Enterobacteria phage phiX174 sensu lato	116471	116471	374840
species	Human coronavirus NL63	63869	63869	277944
species	Haemophilus influenzae	57420	53412	727
species	Human parainfluenza virus 3	24590	24590	11216
species	Corynebacterium aurimucosum	24351	0	169292
species	Mycoplasma hyopneumoniae	12604	181	2099
species	Fusobacterium nucleatum	10312	5481	851
species	Acinetobacter baumannii	9642	9594	470
species	Neisseria meningitidis	8584	6504	487
species	Staphylococcus aureus	6543	6209	1280
species	Prevotella melaninogenica	5698	0	28132
species	Rothia mucilaginosa	5591	0	43675
species	Veillonella parvula	4748	0	29466
species	Serratia marcescens	4705	34	615
species	Corynebacterium callunae	4604	0	1721
species	Respiratory syncytial virus	4336	4336	12814
species	Haemophilus parainfluenzae	4280	0	729
species	Neisseria gonorrhoeae	3991	27	485
species	Mycoplasma arthritidis	3584	0	2111
species	Cucumber green mottle mosaic virus	3085	3085	12235
species	Porphyromonas asaccharolytica	3063	0	28123
species	Hyposoter fugitivus ichnovirus	2608	2608	265522
species	Pseudomonas aeruginosa	2596	2565	287
species	Capnocytophaga ochracea	2427	0	1018
species	Lactobacillus rhamnosus	2110	2044	47715
species	Mycoplasma hominis	1853	0	2098
species	Stenotrophomonas maltophilia	1702	1421	40324
species	Escherichia coli	1699	885	562
species	Influenza A virus	1555	14	11320
species	Tannerella forsythia	1428	0	28112
species	Bacillus thuringiensis	1338	0	1428
species	Hahella chejuensis	1334	0	158327
species	Rothia dentocariosa	1168	0	2047
species	Neisseria lactamica	1158	0	486
species	Haemophilus parasuis	1140	986	738
species	Streptococcus parasanguinis	991	619	1318
species	Actinobacillus pleuropneumoniae	971	956	715
species	Tropheryma whipplei	955	759	2039
species	Mycobacterium abscessus	910	910	36809
species	Maruca vitrata nucleopolyhedrovirus	867	867	1307954
species	Corynebacterium resistens	810	0	258224
species	Lactobacillus gasseri	806	0	1596
species	Porphyromonas gingivalis	782	779	837
species	Prevotella sp. oral taxon 299	719	0	652716
species	Corynebacterium argentoratense	673	0	42817
species	Streptococcus agalactiae	633	520	1311
species	Propionibacterium acnes	632	631	1747
species	Prevotella denticola	631	0	28129
species	Watermelon mosaic virus	626	626	146500
species	Squash mosaic virus	560	560	12263
species	Glypta fumiferanae ichnovirus	544	544	419435
species	Proteus mirabilis	529	417	584
species	Natronococcus occultus	507	0	29288
species	Mycoplasma hyorhinis	492	288	2100
species	Providencia stuartii	464	0	588
species	Prevotella intermedia	452	0	28131
species	Atopobium parvulum	448	0	1382
species	Anaerococcus prevotii	446	0	33034
species	Cercopithecine herpesvirus 2	438	438	10317
species	Tomato mosaic virus	437	437	12253
species	Morganella morganii	422	0	582
species	Streptococcus mitis	421	0	28037
species	Campylobacter concisus	410	0	199
species	Staphylococcus epidermidis	404	290	1282
species	Streptococcus salivarius	401	366	1304
species	Finegoldia magna	395	0	1260
species	Streptobacillus moniliformis	393	0	34105
species	Aggregatibacter aphrophilus	374	0	732
species	Treponema denticola	353	0	158
species	Leptotrichia buccalis	341	0	40542
species	Influenza B virus	335	335	11520
species	Prevotella ruminicola	313	0	839
species	Salinarchaeum sp. Harcht-Bsk1	309	309	1333523
species	Treponema brennaborense	305	0	81028
species	Bovine parainfluenza virus 3	302	302	11215
species	Mycoplasma pulmonis	291	0	2107
species	Verminephrobacter eiseniae	282	0	364317
species	Bacteroides vulgatus	275	0	821
species	Propionibacterium avidum	272	0	33010
species	Treponema pedis	272	0	409322
species	Yersinia phage phiA1122	271	271	227720
species	Streptococcus pneumoniae	261	249	1313
species	Capnocytophaga canimorsus	259	0	28188
species	Candidatus Azobacteroides pseudotrichonymphae	259	0	511435
species	Streptococcus oralis	258	0	1303
species	Fibrella aestuarina	251	0	651143
species	Ictalurid herpesvirus 1	249	249	10401
species	Janthinobacterium sp. Marseille	248	248	375286
species	Enterobacter cloacae	244	175	550
species	Bacteroides helcogenes	239	0	290053
species	Filifactor alocis	236	0	143361
species	Streptococcus suis	236	5	1307
species	Ectocarpus siliculosus virus 1	227	227	37665
species	Lactobacillus reuteri	207	204	1598
species	Thermanaerovibrio acidaminovorans	189	0	81462
species	Burkholderia mallei	189	181	13373
species	Taylorella equigenitalis	187	103	29575
species	Pseudogulbenkiania sp. NH8B	183	183	748280
species	Buchnera aphidicola	177	16	9
species	Halovivax ruber	174	0	387341
species	Collimonas fungivorans	173	0	158899
species	Mannheimia haemolytica	165	157	75985
species	Betacoronavirus 1	163	14	694003
species	Butyrivibrio proteoclasticus	158	0	43305
species	Prevotella dentalis	157	0	52227
species	Papaya ringspot virus	156	156	12205
species	Treponema succinifaciens	154	0	167
species	Actinobacillus suis	154	0	716
species	Streptococcus sanguinis	153	0	1305
species	Candidatus Saccharimonas aalborgensis	150	150	1332188
species	Sebaldella termitidis	145	0	826
species	Streptococcus oligofermentans	138	0	195041
species	Sulfolobus islandicus	137	0	43080
species	Klebsiella pneumoniae	137	108	573
species	Salmonella enterica	137	2	28901
species	Histophilus somni	135	52	731
species	Bdellovibrio bacteriovorus	134	0	959
species	Thermodesulfobacterium geofontis	131	0	1295609
species	Lactococcus lactis	128	127	1358
species	Aeromonas hydrophila	126	0	644
species	Thermoanaerobacter wiegelii	125	0	46354
species	Lactobacillus fermentum	122	122	1613
species	Pseudomonas fluorescens	122	53	294
species	Parabacteroides distasonis	121	0	823
species	Wigglesworthia glossinidia	119	44	51229
species	Aggregatibacter actinomycetemcomitans	119	91	714
species	Listeria monocytogenes	118	117	1639
species	Streptococcus pseudopneumoniae	117	0	257758
species	Exiguobacterium sp. AT1b	115	115	360911
species	Xanthomonas campestris	112	102	339
species	Thiomicrospira crunogena	109	0	39765
species	Eubacterium eligens	106	0	39485
species	Helicobacter bizzozeronii	105	0	56877
species	Sorangium cellulosum	104	0	56
species	Natrialba magadii	102	0	13769
species	Legionella longbeachae	101	0	450
species	Herminiimonas arsenicoxydans	101	101	204773
species	Streptococcus pyogenes	100	98	1314
species	Clostridium acetobutylicum	100	100	1488
species	Olsenella uli	98	0	133926
species	alpha proteobacterium HIMB59	96	96	744985
species	Mobiluncus curtisii	95	0	2051
species	Emiliania huxleyi virus 86	94	94	181082
species	Bacteroides fragilis	93	93	817
species	Campylobacter curvus	93	0	200
species	Lactobacillus sanfranciscensis	92	0	1625
species	Corynebacterium halotolerans	89	0	225326
species	Frog virus 3	88	88	10493
species	Paenibacillus sp. Y412MC10	85	85	481743
species	Choristoneura occidentalis granulovirus	83	83	364745
species	Streptococcus gordonii	82	0	1302
species	Alkalilimnicola ehrlichii	81	0	351052
species	Rickettsia africae	80	0	35788
species	Gardnerella vaginalis	79	79	2702
species	Bacillus infantis	78	0	324767
species	Streptococcus thermophilus	70	64	1308
species	Actinobacillus succinogenes	69	0	67854
species	Pasteurella multocida	67	45	747
species	Corynebacterium maris	65	0	575200
species	Mannheimia succiniciproducens	63	0	157673
species	Candidatus Liberibacter americanus	63	0	309868
species	Murid herpesvirus 2	62	62	28304
species	Borrelia duttonii	60	0	40834
species	Candidatus Saccharibacteria bacterium RAAC3_TM7_1	60	60	1394711
species	Bibersteinia trehalosi	58	0	47735
species	Candidatus Portiera aleyrodidarum	58	58	91844
species	Gallibacterium anatis	57	0	750
species	Shigella flexneri	55	49	623
species	Bacillus cereus	54	28	1396
species	Sphaerochaeta globosa	54	0	1131703
species	Enterobacteria phage M13	54	54	10870
species	Mycoplasma ovis	53	0	171632
species	Eubacterium siraeum	53	20	39492
species	Desulfohalobium retbaense	53	0	45663
species	Jonesia denitrificans	53	0	43674
species	Aminobacterium colombiense	52	0	81468
species	Sinorhizobium fredii	51	0	380
species	Streptococcus intermedius	51	51	1338
species	Haliangium ochraceum	50	0	80816
species	Thauera sp. MZ1T	49	49	85643
species	Magnetococcus marinus	49	0	1124597
species	Caldanaerobacter subterraneus	48	0	911092
species	Helicobacter pylori	48	1	210
species	Burkholderia cenocepacia	47	0	95486
species	Psychromonas sp. CNPT3	47	47	314282
species	Mycoplasma genitalium	47	0	2097
species	Pseudomonas fulva	46	0	47880
species	Micrococcus luteus	46	0	1270
species	Acinetobacter sp. ADP1	45	45	62977
species	Crinalium epipsammum	45	0	241425
species	Borrelia crocidurae	44	0	29520
species	Enterococcus faecalis	44	0	1351
species	Megamonas hypermegale	43	0	158847
species	Psychrobacter sp. PRwf-1	43	43	349106
species	Cyprinid herpesvirus 3	42	42	180230
species	Mycoplasma synoviae	42	0	2109
species	Ruminococcus albus	41	0	1264
species	Oscillibacter valericigenes	40	0	351091
species	Pelobacter propionicus	39	0	29543
species	Methanococcus vannielii	39	0	2187
species	Alistipes finegoldii	38	0	214856
species	Citrobacter rodentium	38	0	67825
species	Ochrobactrum anthropi	38	0	529
species	White spot syndrome virus	37	0	342409
species	Thermoanaerobacterium thermosaccharolyticum	37	37	1517
species	Megasphaera elsdenii	37	0	907
species	Streptococcus infantarius	37	0	102684
species	Streptococcus mutans	37	37	1309
species	Orientia tsutsugamushi	37	37	784
species	Arthrobacter arilaitensis	36	0	256701
species	Pseudomonas denitrificans	36	0	43306
species	Thermoanaerobacter italicus	36	0	108150
species	Clostridium phytofermentans	35	0	66219
species	Human parainfluenza virus 2	35	35	11212
species	Vibrio cholerae	35	4	666
species	Paenibacillus mucilaginosus	34	0	61624
species	Clostridium botulinum	34	32	1491
species	Candidatus Carsonella ruddii	34	2	114186
species	Campylobacter hominis	33	0	76517
species	Eubacterium rectale	33	31	39491
species	Owenweeksia hongkongensis	33	0	253245
species	Pseudomonas savastanoi	33	0	29438
species	Parachlamydia acanthamoebae	32	0	83552
species	Lactobacillus buchneri	32	31	1581
species	Mycoplasma conjunctivae	32	0	45361
species	Lawsonia intracellularis	31	1	29546
species	Kribbella flavida	31	0	182640
species	[Clostridium] difficile	31	28	1496
species	Marinitoga piezophila	31	0	149715
species	Erysipelothrix rhusiopathiae	29	0	1648
species	Candidatus Atelocyanobacterium thalassa	29	29	713887
species	Ilyobacter polytropus	28	0	167642
species	Xylella fastidiosa	28	7	2371
species	Lactobacillus ruminis	28	0	1623
species	Selenomonas sputigena	27	0	69823
species	Candidatus Riesia pediculicola	27	0	401619
species	Streptococcus anginosus	27	23	1328
species	Kineococcus radiotolerans	27	0	131568
species	Lactobacillus crispatus	26	0	47770
species	Dickeya dadantii	26	0	204038
species	Geobacillus thermoleovorans	26	0	33941
species	Pantoea ananatis	25	7	553
species	Saccharomonospora viridis	25	0	1852
species	Methanosarcina barkeri	24	0	2208
species	Rhizobium leguminosarum	24	0	384
species	Choristoneura fumiferana DEF multiple nucleopolyhedrovirus	23	23	74660
species	Flavobacterium indicum	23	0	312277
species	Sanguibacter keddieii	23	0	60920
species	Cupriavidus necator	22	21	106590
species	Acidaminococcus fermentans	22	0	905
species	Yersinia pseudotuberculosis	21	0	633
species	Haemophilus ducreyi	21	0	730
species	Streptococcus equi	21	1	1336
species	Desulfococcus oleovorans	20	0	181663
species	Pyrolobus fumarii	20	0	54252
species	Anabaena sp. 90	20	20	46234
species	Clostridium saccharolyticum	20	0	84030
species	Pseudomonas stutzeri	19	2	316
species	Enterobacteriaceae bacterium strain FGI 57	19	19	693444
species	Corynebacterium urealyticum	19	17	43771
species	Pseudoxanthomonas spadix	18	0	415229
species	Psychromonas ingrahamii	18	0	357794
species	Methanococcus voltae	18	0	2188
species	Acidothermus cellulolyticus	18	0	28049
species	Pseudaletia unipuncta granulovirus	18	18	36355
species	Corynebacterium diphtheriae	18	4	1717
species	Human metapneumovirus	18	18	162145
species	Shewanella baltica	18	0	62322
species	Candidatus Blochmannia floridanus	17	17	203907
species	Candidatus Sulcia muelleri	17	4	336810
species	Caldicellulosiruptor saccharolyticus	17	0	44001
species	Methanothermus fervidus	17	0	2180
species	Heliobacterium modesticaldum	16	0	35701
species	Molluscum contagiosum virus	16	0	10279
species	Streptococcus constellatus	16	0	76860
species	Francisella tularensis	16	14	263
species	Thermosediminibacter oceani	16	0	291990
species	Rhodopseudomonas palustris	15	0	1076
species	Acetobacter pasteurianus	15	0	438
species	Meleagrid herpesvirus 1	15	15	37108
species	Human herpesvirus 1	15	15	10298
species	Legionella pneumophila	15	15	446
species	Pantoea sp. At-9b	15	15	592316
species	Methylobacterium radiotolerans	15	0	31998
species	Cellvibrio japonicus	14	0	155077
species	Acinetobacter calcoaceticus	14	0	471
species	Alteromonas macleodii	14	11	28108
species	Prochlorococcus marinus	14	0	1219
species	Candidatus Hamiltonella defensa	14	0	138072
species	Mycoplasma putrefaciens	14	14	2123
species	Pedobacter saltans	14	0	151895
species	Streptococcus sp. I-P16	14	14	1156433
species	Pseudomonas protegens	14	14	380021
species	Dichelobacter nodosus	14	0	870
species	Laribacter hongkongensis	14	0	168471
species	Marivirga tractuosa	14	0	1006
species	Glaciecola nitratireducens	14	0	300231
species	Geobacter uraniireducens	14	0	351604
species	[Eubacterium] cylindroides	13	0	39483
species	Pectobacterium carotovorum	13	0	554
species	Methylomicrobium alcaliphilum	13	0	271065
species	Serratia symbiotica	13	0	138074
species	Haliscomenobacter hydrossis	12	0	2350
species	Selenomonas ruminantium	12	0	971
species	Shimwellia blattae	12	0	563
species	Spirochaeta thermophila	12	11	154
species	Enterobacter lignolyticus	12	0	1334193
species	Ralstonia solanacearum	12	0	305
species	Candidatus Moranella endobia	12	12	1048758
species	Kangiella koreensis	12	0	261964
species	Sodalis glossinidius	12	0	63612
species	Acidithiobacillus ferrivorans	12	0	160808
species	Campylobacter jejuni	12	0	197
species	Ruminococcus bromii	11	0	40518
species	Human herpesvirus 7	11	11	10372
species	Blattabacterium sp. (Blaberus giganteus)	11	11	1186051
species	Methanosaeta harundinacea	11	0	301375
species	Vibrio sp. Ex25	11	11	150340
species	Mycoplasma cynos	11	0	171284
species	Erwinia sp. Ejp617	11	11	215689
species	Coxiella burnetii	11	7	777
species	Photorhabdus asymbiotica	11	11	291112
species	Clostridium thermocellum	10	10	1515
species	Bifidobacterium thermophilum	10	0	33905
species	Mycobacterium sp. JLS	10	10	164757
species	Xenorhabdus nematophila	10	0	628
species	Methanobrevibacter ruminantium	10	0	83816
species	Corynebacterium glutamicum	10	3	1718
species	Pseudomonas putida	10	0	303
species	Cercopithecine herpesvirus 5	10	10	50292
species	Coprococcus sp. ART55/1	10	10	751585
species	Shigella sonnei	10	2	624
species	Mycoplasma gallisepticum	10	3	2096
species	Anguillid herpesvirus 1	9	9	150286
species	Serratia sp. AS13	9	9	768493
species	Borrelia recurrentis	9	0	44449
species	Cucurbit yellow stunting disorder virus	9	9	51330
species	Arcanobacterium haemolyticum	9	0	28264
species	Lactobacillus kefiranofaciens	9	0	267818
species	Methylococcus capsulatus	9	0	414
species	Solitalea canadensis	9	0	995
species	Lactobacillus johnsonii	9	7	33959
species	Streptococcus sp. I-G2	8	8	1156431
species	Frateuria aurantia	8	0	81475
species	Candidatus Symbiobacter mobilis	8	0	1436290
species	Vaccinia virus	8	8	10245
species	Candidatus Hodgkinia cicadicola	8	0	573658
species	Arcobacter sp. L	8	8	944547
species	Candidatus Tremblaya princeps	8	8	189385
species	Staphylococcus pseudintermedius	8	8	283734
species	Trichormus azollae	8	0	1164
species	Methanobrevibacter smithii	8	0	2173
species	Bacillus amyloliquefaciens	8	4	1390
species	Mamestra configurata nucleopolyhedrovirus A	8	8	207830
species	Candidatus Liberibacter solanacearum	8	0	556287
species	Vibrio nigripulchritudo	8	8	28173
species	Desulfitobacterium dichloroeliminans	8	0	233055
species	Helicobacter cetorum	8	0	138563
species	Enterococcus casseliflavus	8	0	37734
species	Rubrivivax gelatinosus	7	0	28068
species	Moorella thermoacetica	7	0	1525
species	Azotobacter vinelandii	7	7	354
species	Corynebacterium jeikeium	7	0	38289
species	Oceanimonas sp. GK1	7	7	511062
species	Caldilinea aerophila	7	0	133453
species	Rhinovirus A	7	7	147711
species	Nocardioides sp. JS614	7	7	196162
species	Caldicellulosiruptor kronotskyensis	7	0	413889
species	Caldicellulosiruptor bescii	7	0	31899
species	Edwardsiella ictaluri	7	0	67780
species	Bacillus subtilis	7	1	1423
species	Aeromonas veronii	7	0	654
species	Calothrix parietina	7	0	32054
species	Cotesia congregata bracovirus	7	7	39640
species	Persephonella marina	7	0	309805
species	Yersinia enterocolitica	7	0	630
species	secondary endosymbiont of Heteropsylla cubana	7	7	134287
species	Vibrio splendidus	7	0	29497
species	Staphylococcus haemolyticus	7	0	1283
species	Staphylococcus carnosus	7	0	1281
species	Lactobacillus casei	6	0	1582
species	Vibrio campbellii	6	0	680
species	Serratia plymuthica	6	0	82996
species	Klebsiella oxytoca	6	6	571
species	Mycoplasma crocodyli	6	0	50052
species	Shewanella frigidimarina	6	0	56812
species	Streptococcus dysgalactiae	6	0	1334
species	Burkholderia lata	6	6	482957
species	Candidatus Baumannia cicadellinicola	6	0	186490
species	Coraliomargarita akajimensis	6	0	395922
species	Sphaerobacter thermophilus	6	0	2057
species	Beijerinckia indica	6	0	533
species	secondary endosymbiont of Ctenarytaina eucalypti	6	6	1199245
species	Nautilia profundicola	6	0	244787
species	Candidatus Blochmannia vafer	6	0	251535
species	Candidatus Zinderia insecticola	6	0	884215
species	Psychrobacter arcticus	6	0	334543
species	Aliivibrio fischeri	5	4	668
species	Anaerobaculum mobile	5	0	97477
species	Vibrio vulnificus	5	0	672
species	Candidatus Profftella armatura	5	5	669502
species	Pectobacterium atrosepticum	5	0	29471
species	Ramlibacter tataouinensis	5	0	94132
species	Erwinia pyrifoliae	5	0	79967
species	Lactobacillus acidophilus	5	5	1579
species	Streptococcus uberis	5	0	1349
species	Macrococcus caseolyticus	5	0	69966
species	Erwinia billingiae	5	0	182337
species	Thioalkalimicrobium cyclicum	5	0	147268
species	Magnetospirillum gryphiswaldense	5	0	55518
species	Borrelia burgdorferi	5	0	139
species	Meiothermus silvanus	5	0	52022
species	Flavobacterium columnare	5	0	996
species	Chromohalobacter salexigens	5	0	158080
species	Yersinia pestis	5	1	632
species	Halorhodospira halophila	5	0	1053
species	Acholeplasma laidlawii	5	0	2148
species	Sinorhizobium meliloti	5	5	382
species	Amphibacillus xylanus	5	0	1449
species	Alcanivorax dieselolei	5	0	285091
species	Flavobacterium johnsoniae	5	0	986
species	Marinomonas sp. MWYL1	5	5	400668
species	Corynebacterium kroppenstedtii	4	0	161879
species	Colwellia psychrerythraea	4	0	28229
species	Methylacidiphilum infernorum	4	0	511746
species	Desulfotomaculum acetoxidans	4	0	58138
species	Leptospira interrogans	4	0	173
species	Enterobacter sp. 638	4	4	399742
species	Marinomonas posidonica	4	0	936476
species	Thermomonospora curvata	4	0	2020
species	Pseudomonas brassicacearum	4	0	930166
species	Anaeromyxobacter sp. Fw109-5	4	4	404589
species	Corynebacterium pseudotuberculosis	4	2	1719
species	Bifidobacterium breve	4	4	1685
species	Parvularcula bermudensis	4	0	208216
species	Agrotis segetum nucleopolyhedrovirus	4	4	31508
species	Pseudoxanthomonas suwonensis	4	0	314722
species	Stackebrandtia nassauensis	4	0	283811
species	Pirellula staleyi	4	0	125
species	Carboxydothermus hydrogenoformans	4	0	129958
species	Lactococcus garvieae	4	4	1363
species	Pusillimonas sp. T7-7	4	4	1007105
species	Acidianus filamentous virus 9	4	4	512792
species	Halyomorpha halys symbiont	4	4	1235990
species	delta proteobacterium BABL1	4	4	673862
species	Cronobacter sakazakii	4	2	28141
species	Acidaminococcus intestini	3	0	187327
species	Nitrosococcus halophilus	3	0	133539
species	Thiobacillus denitrificans	3	0	36861
species	Rhodococcus jostii	3	0	132919
species	Streptosporangium roseum	3	0	2001
species	Spodoptera frugiperda multiple nucleopolyhedrovirus	3	3	10455
species	Orgyia leucostigma NPV	3	3	490711
species	Spiribacter sp. UAH-SP71	3	3	1335757
species	Chlamydia pecorum	3	2	85991
species	Aerococcus urinae	3	0	1376
species	Brachyspira murdochii	3	0	84378
species	Halomonas elongata	3	0	2746
species	Alicyclobacillus acidocaldarius	3	0	405212
species	Taterapox virus	3	3	28871
species	Gramella forsetii	3	0	411153
species	Staphylococcus lugdunensis	3	1	28035
species	Erwinia tasmaniensis	3	0	338565
species	Camelpox virus	3	3	28873
species	Desulfurispirillum indicum	3	0	936456
species	Geitlerinema sp. PCC 7407	3	3	1173025
species	Thermobispora bispora	3	0	2006
species	Tepidanaerobacter acetatoxydans	3	0	499229
species	Oenococcus oeni	3	0	1247
species	Lactobacillus sakei	3	0	1599
species	Methanosarcina acetivorans	3	0	2214
species	Lactobacillus plantarum	3	0	1590
species	Thioflavicoccus mobilis	3	0	80679
species	Zymomonas mobilis	3	3	542
species	Thermobaculum terrenum	3	0	166501
species	Geobacillus thermoglucosidasius	3	0	1426
species	Thalassolituus oleivorans	3	0	187493
species	Saccharopolyspora erythraea	3	0	1836
species	Anaplasma marginale	3	0	770
species	Bacillus weihenstephanensis	3	0	86662
species	Elusimicrobium minutum	3	0	423605
species	Teredinibacter turnerae	3	0	2426
species	Caulobacter sp. K31	3	3	366602
species	Candidatus Rickettsia amblyommii	3	0	33989
species	Methylocella silvestris	3	0	199596
species	Wolinella succinogenes	3	0	844
species	Dehalococcoides mccartyi	3	3	61435
species	[Clostridium] sticklandii	3	3	1511
species	Shewanella violacea	3	0	60217
species	Robiginitalea biformata	3	0	252307
species	Corynebacterium efficiens	3	0	152794
species	Nitrobacter hamburgensis	3	0	912
species	Enterobacteria phage G4 sensu lato	3	3	374844
species	Psychroflexus torquis	3	0	57029
species	Thioalkalivibrio sulfidophilus	3	0	1033854
species	Bacillus coagulans	3	3	1398
species	Bradyrhizobium oligotrophicum	2	0	44255
species	Nitrosospira multiformis	2	0	1231
species	Salmonella bongori	2	0	54736
species	Streptomyces flavogriseus	2	0	67299
species	Lactobacillus delbrueckii	2	0	1584
species	Candidatus Liberibacter asiaticus	2	0	34021
species	Rhodothermus marinus	2	2	29549
species	Methanosarcina mazei	2	0	2209
species	Spiroplasma diminutum	2	0	216936
species	Candidatus Nitrospira defluvii	2	2	330214
species	Coriobacterium glomerans	2	0	33871
species	Trichoplusia ni ascovirus 2c	2	2	328615
species	Truepera radiovictrix	2	0	332249
species	Ureaplasma parvum	2	0	134821
species	Tetragenococcus halophilus	2	0	51669
species	Croceibacter atlanticus	2	0	313588
species	Ehrlichia ruminantium	2	0	779
species	Oscillatoria acuminata	2	0	118323
species	Tsukamurella paurometabola	2	0	2061
species	Bacteriovorax marinus	2	0	97084
species	Mycoplasma bovis	2	0	28903
species	Fluviicola taffensis	2	0	191579
species	Carnobacterium maltaromaticum	2	0	2751
species	Delftia acidovorans	2	0	80866
species	Cardinium endosymbiont of Encarsia pergandiella	2	0	249402
species	Anoxybacillus flavithermus	2	0	33934
species	Aquifex aeolicus	2	0	63363
species	Photorhabdus luminescens	2	0	29488
species	Thermomicrobium roseum	2	0	500
species	Bacillus pumilus	2	0	1408
species	Bacillus halodurans	2	0	86665
species	Ovine herpesvirus 2	2	2	10398
species	Pseudomonas poae	2	0	200451
species	Gemmatimonas aurantiaca	2	0	173480
species	Riemerella anatipestifer	2	2	34085
species	Candidatus Kinetoplastibacterium oncopeltii	2	0	994696
species	Methanoregula boonei	2	0	358766
species	Desulfovibrio gigas	2	0	879
species	Pediococcus pentosaceus	2	2	1255
species	Invertebrate iridescent virus 6	2	2	176652
species	Rhodomicrobium vannielii	2	0	1069
species	Thermodesulfobium narugense	2	0	184064
species	Alkaliphilus metalliredigens	2	0	208226
species	Simiduia agarivorans	2	0	447471
species	Spiribacter salinus	2	0	1335746
species	Orgyia pseudotsugata multiple nucleopolyhedrovirus	2	2	262177
species	Bordetella pertussis	2	2	520
species	Haloquadratum walsbyi	2	0	293091
species	Segniliparus rotundus	2	0	286802
species	Geobacillus sp. GHH01	2	2	1233873
species	Weeksella virosa	2	0	1014
species	Lactobacillus salivarius	2	2	1624
species	Bacillus phage SPO1	2	2	10685
species	Bacteroides salanitronis	2	0	376805
species	Chamaesiphon minutus	2	0	1173032
species	Flavobacteriaceae bacterium 3519-10	2	2	531844
species	Sulfobacillus acidophilus	2	2	53633
species	Rivularia sp. PCC 7116	2	2	373994
species	Enterobacteria phage ID18 sensu lato	2	2	489829
species	Mycobacterium tuberculosis	2	0	1773
species	Oryctes rhinoceros virus	2	2	92521
species	Dyadobacter fermentans	2	0	94254
species	Thiocystis violascens	2	0	73141
species	Pectobacterium sp. SCC3193	2	2	1166016
species	Candidatus Phytoplasma mali	2	2	37692
species	Mycoplasma parvum	2	0	984991
species	Thermodesulfatator indicus	2	0	171695
species	Flexibacter litoralis	2	0	999
species	Staphylococcus aureus subsp. aureus MSHR1132	2	2	985002
species	Desulfovibrio magneticus	2	0	184917
species	Enterobacter sp. R4-368	2	2	1166130
species	Enterobacteria phage ID2 Moscow/ID/2001	2	2	511969
species	Photobacterium profundum	2	0	74109
species	Mycoplasma mycoides	2	0	2102
species	Thermus thermophilus	2	2	274
species	Streptomyces venezuelae	2	0	54571
species	Pelobacter carbinolicus	2	0	19
species	Pantoea vagans	2	0	470934
species	Runella slithyformis	2	0	106
species	Klebsiella variicola	2	0	244366
species	Herbaspirillum seropedicae	2	0	964
species	Candidatus Solibacter usitatus	1	0	332163
species	Paludibacter propionicigenes	1	0	185300
species	Vibrio parahaemolyticus	1	1	670
species	Echinicola vietnamensis	1	0	390884
species	Candidatus Nasuia deltocephalinicola	1	0	1160784
species	Clostridium novyi	1	0	1542
species	Bacillus anthracis	1	1	1392
species	Anabaena cylindrica	1	0	1165
species	Halanaerobium hydrogeniformans	1	1	656519
species	Pseudomonas sp. TKP	1	1	1415630
species	Methanocaldococcus vulcanius	1	0	73913
species	Halobacillus halophilus	1	0	1570
species	Sulfurihydrogenibium sp. YO3AOP1	1	1	436114
species	Gloeocapsa sp. PCC 7428	1	1	1173026
species	Spodoptera litura granulovirus	1	1	359919
species	Clostridium beijerinckii	1	0	1520
species	Solibacillus silvestris	1	0	76853
species	Candidatus Accumulibacter phosphatis	1	0	327160
species	Sulfurospirillum deleyianum	1	0	65553
species	Eggerthella lenta	1	0	84112
species	Desulfatibacillum alkenivorans	1	0	259354
species	Polaribacter sp. MED152	1	1	313598
species	Streptococcus phage Abc2	1	1	633135
species	Gordonibacter pamelaeae	1	0	471189
species	Ferrimonas balearica	1	0	44012
species	Pseudomonas mendocina	1	0	300
species	Starkeya novella	1	0	921
species	Mycobacterium canettii	1	0	78331
species	Enterobacteria phage St-1	1	1	10845
species	Clostridium clariflavum	1	0	288965
species	Maricaulis maris	1	0	74318
species	Syntrophus aciditrophicus	1	0	316277
species	Sphaerochaeta pleomorpha	1	0	1131707
species	Streptomyces sp. PAMC26508	1	1	1265601
species	uncultured Termite group 1 bacterium	1	0	167965
species	Phenylobacterium zucineum	1	0	284016
species	Pandoraea pnomenusa	1	0	93220
species	Stigmatella aurantiaca	1	0	41
species	Blattabacterium sp. (Nauphoeta cinerea)	1	1	1316444
species	Candidatus Endolissoclinum faulkneri	1	0	1263979
species	Cyclobacterium marinum	1	0	104
species	Thioalkalivibrio nitratireducens	1	0	186931
species	Calditerrivibrio nitroreducens	1	0	477976
species	Bacillus megaterium	1	1	1404
species	Leptolyngbya sp. PCC 7376	1	1	111781
species	Desulfovibrio hydrothermalis	1	1	191026
species	Asticcacaulis excentricus	1	0	78587
species	Brevibacillus brevis	1	0	1393
species	Roseburia hominis	1	0	301301
species	Methylophaga frappieri	1	1	754477
species	Rhodococcus erythropolis	1	0	1833
species	Desulfotomaculum ruminis	1	0	1564
species	Methanotorris igneus	1	0	2189
species	Beutenbergia cavernae	1	0	84757
species	Glaciecola psychrophila	1	0	326544
species	Methylocystis sp. SC2	1	1	187303
species	Chlorobaculum parvum	1	0	274539
species	Gloeobacter kilaueensis	1	0	1416614
species	Candidatus Tremblaya phenacola	1	0	1010676
species	Geobacillus sp. WCH70	1	1	471223
species	Mesotoga prima	1	0	1184387
species	Serratia proteamaculans	1	0	28151
species	Weissella koreensis	1	0	165096
species	Aromatoleum aromaticum	1	0	551760
species	Pieris rapae granulovirus	1	1	252584
species	Methylotenera versatilis	1	0	1055487
species	Rahnella aquatilis	1	0	34038
species	Rubrobacter xylanophilus	1	0	49319
species	Nakamurella multipartita	1	0	53461
species	Candidatus Desulforudis audaxviator	1	0	471827
species	Singulisphaera acidiphila	1	0	466153
species	Flexistipes sinusarabici	1	0	2352
species	Lactobacillus helveticus	1	1	1587
species	Ralstonia pickettii	1	1	329
species	Melissococcus plutonius	1	1	33970
species	Geodermatophilus obscurus	1	0	1861
species	Autographa californica multiple nucleopolyhedrovirus	1	0	307456
species	Mycoplasma agalactiae	1	0	2110
species	Streptococcus pasteurianus	1	0	197614
species	Hyphomonas neptunium	1	0	81032
species	Nitrosomonas eutropha	1	0	916
species	Acidiphilium multivorum	1	0	62140
species	Desulfobacula toluolica	1	0	28223
species	Marinobacter hydrocarbonoclasticus	1	1	2743
species	Tomato yellow dwarf disease associated satellite DNA beta-[Kochi]	1	1	427315
species	Paenibacillus polymyxa	1	0	1406
species	Cellulophaga algicola	1	0	59600
species	Acinetobacter oleivorans	1	0	1148157
species	Bifidobacterium adolescentis	1	0	1680
species	Rhizobium sp. IRBG74	1	1	424182
species	Candidatus Phytoplasma australiense	1	1	59748
species	Taylorella asinigenitalis	1	1	84590
species	Methanothermococcus okinawensis	1	0	155863
species	Acidithiobacillus ferrooxidans	1	1	920
species	Bacillus cellulosilyticus	1	0	1413
species	Microlunatus phosphovorus	1	0	29405
species	St Croix River virus	1	1	104581
species	Cupriavidus taiwanensis	1	0	164546
species	Mycoplasma fermentans	1	1	2115
species	Candidatus Midichloria mitochondrii	1	0	234827
species	Cyanobium gracile	1	0	59930
species	Frankia alni	1	0	1859
species	Mycobacterium sp. JDM601	1	1	875328
species	Gallionella capsiferriformans	1	0	370405
species	Enterobacter aerogenes	1	0	548
species	Clostridium sp. SY8519	1	1	1042156
species	Bifidobacterium bifidum	1	0	1681
species	Leuconostoc carnosum	1	0	1252
species	Methylibium petroleiphilum	1	0	105560
species	Phycisphaera mikurensis	1	0	547188
species	Krokinobacter sp. 4H-3-7-5	1	1	983548
species	Streptococcus parauberis	1	0	1348
species	Shigella dysenteriae	1	0	622
species	Faecalibacterium prausnitzii	1	0	853
species	Paramecium bursaria Chlorella virus NY2A	1	1	46021
species	Thermincola potens	1	0	863643
species	Chlorobium phaeobacteroides	1	0	1096
species	Shigella boydii	1	0	621
species	Kytococcus sedentarius	1	0	1276
species	Lactobacillus paracasei	1	0	1597
species	Streptococcus macedonicus	1	0	59310
species	Staphylothermus marinus	1	0	2280
species	[Ruminococcus] torques	1	0	33039
species	Bifidobacterium asteroides	1	0	1684
species	Ammonifex degensii	1	0	42838
species	Marinithermus hydrothermalis	1	0	186192
species	Halothiobacillus neapolitanus	1	0	927
species	Candidatus Puniceispirillum marinum	1	0	767892
species	Raoultella ornithinolytica	1	0	54291
species	Salinibacter ruber	1	1	146919
species	Marinobacter sp. BSs20148	1	1	490759
species	Clavibacter michiganensis	1	1	28447
species	Thermacetogenium phaeum	1	0	85874
species	Flavobacterium branchiophilum	1	0	55197
species	Natranaerobius thermophilus	1	0	375929
species	Emticicia oligotrophica	1	0	312279
species	Mycobacterium bovis	1	0	1765
species	Nonlabens dokdonensis	1	0	328515
species	Bartonella australis	1	0	388640
species	Flavobacterium psychrophilum	1	0	96345
species	Sepik virus	1	1	44026
species	Dehalogenimonas lykanthroporepellens	1	0	552810
species	Ruminococcus sp. SR1/5	1	1	657323
species	Staphylococcus saprophyticus	1	0	29385
species	Propionibacterium propionicum	1	0	1750
species	Desulfurivibrio alkaliphilus	1	0	427923
species	Suid herpesvirus 1	1	1	10345
species	Canarypox virus	1	1	44088
species	Cyanothece sp. PCC 7424	1	1	65393
species	Syntrophobacter fumaroxidans	1	0	119484
species	Citrobacter koseri	1	0	545
species	Pseudomonas syringae	1	0	317
species	Stanieria cyanosphaera	1	0	102116
species	Spirochaeta smaragdinae	1	0	55206
species	Desulfotomaculum carboxydivorans	1	0	327817
species	Mycobacterium leprae	1	1	1769
species	Delftia sp. Cs1-4	1	1	742013
species	Bifidobacterium animalis	1	0	28025
species	Burkholderia multivorans	1	0	87883
species	Natronobacterium gregoryi	1	0	44930
species	Azospirillum brasilense	1	0	192
species	Candidatus Nitrososphaera gargensis	1	0	497727
species	Microcystis aeruginosa	1	0	1126
species	Burkholderia rhizoxinica	1	0	412963
species	Vibrio sp. EJY3	1	1	1116375
species	Blattabacterium sp. (Blattella germanica)	1	0	624186
species	gamma proteobacterium HdN1	1	1	83406
species	Arcobacter nitrofigilis	1	0	28199
species	Desulfovibrio alaskensis	1	0	58180
species	candidate division WWE3 bacterium RAAC2_WWE3_1	1	1	1394710
species	Bacillus sp. 1NLA3E	1	1	666686
species	Helicobacter hepaticus	1	0	32025
species	Rhodospirillum photometricum	1	0	1084
species	Pseudoalteromonas haloplanktis	1	0	228
species	Listeria ivanovii	1	0	1638
species	Acidianus filamentous virus 1	1	1	235266
species	Mesoplasma florum	1	1	2151
species	[Clostridium] stercorarium	1	0	1510
species	Comamonas testosteroni	1	0	285
species	Brachyspira intermedia	1	0	84377
subspecies	Fusobacterium nucleatum subsp. animalis	2573	0	76859
subspecies	Fusobacterium nucleatum subsp. vincentii	1132	0	155615
subspecies	Fusobacterium nucleatum subsp. nucleatum	1126	0	76856
subspecies	Morganella morganii subsp. morganii	422	0	180434
subspecies	Staphylococcus aureus subsp. aureus	311	90	46170
subspecies	Salmonella enterica subsp. enterica	106	16	59201
subspecies	Enterobacter cloacae subsp. cloacae	61	0	336306
subspecies	Caldanaerobacter subterraneus subsp. tengcongensis	48	0	119072
subspecies	Streptococcus infantarius subsp. infantarius	37	0	150054
subspecies	Salmonella enterica subsp. arizonae	29	0	59203
subspecies	Pasteurella multocida subsp. multocida	21	0	44283
subspecies	Streptococcus equi subsp. zooepidemicus	20	8	40041
subspecies	Streptococcus constellatus subsp. pharyngis	16	12	184250
subspecies	Pectobacterium carotovorum subsp. carotovorum	13	3	555
subspecies	Campylobacter jejuni subsp. jejuni	12	0	32022
subspecies	Selenomonas ruminantium subsp. lactilytica	12	0	114197
subspecies	Staphylococcus carnosus subsp. carnosus	7	0	147448
subspecies	Yersinia enterocolitica subsp. palearctica	7	0	150053
subspecies	Beijerinckia indica subsp. indica	6	0	31994
subspecies	Streptococcus dysgalactiae subsp. equisimilis	6	3	119602
subspecies	Enterobacter cloacae subsp. dissolvens	5	0	69219
subspecies	Pseudomonas brassicacearum subsp. brassicacearum	4	0	86264
subspecies	Lactobacillus plantarum subsp. plantarum	3	0	337330
subspecies	Lactobacillus sakei subsp. sakei	3	0	214326
subspecies	Yersinia pestis subsp. microtus	3	0	1234659
subspecies	Alicyclobacillus acidocaldarius subsp. acidocaldarius	3	3	1388
subspecies	Lactobacillus delbrueckii subsp. bulgaricus	2	2	1585
subspecies	Mycoplasma mycoides subsp. mycoides	2	0	2103
subspecies	Bacillus amyloliquefaciens subsp. plantarum	2	1	1054400
subspecies	Francisella tularensis subsp. holarctica	2	0	119857
subspecies	Photorhabdus luminescens subsp. laumondii	2	0	141679
subspecies	Bifidobacterium animalis subsp. lactis	1	0	302911
subspecies	Bacillus subtilis subsp. spizizenii	1	0	96241
subspecies	Staphylococcus saprophyticus subsp. saprophyticus	1	0	147452
subspecies	Lactococcus lactis subsp. lactis	1	0	1360
subspecies	Bacillus amyloliquefaciens subsp. amyloliquefaciens	1	0	1054405
subspecies	Listeria ivanovii subsp. ivanovii	1	0	202751
subspecies	Lactobacillus paracasei subsp. paracasei	1	0	47714
subspecies	Clostridium stercorarium subsp. stercorarium	1	0	160845
subspecies	Yersinia pestis subsp. pestis	1	0	385964
subspecies	Bacillus subtilis subsp. natto	1	0	86029
strain	Achromobacter xylosoxidans NBRC 15126 = ATCC 27061	509173	509173	1216976
strain	Moraxella catarrhalis RH4	157087	157087	749219
strain	Corynebacterium aurimucosum ATCC 700975	24351	24351	548476
strain	Mycoplasma hyopneumoniae J	9669	9669	262719
strain	Prevotella melaninogenica ATCC 25845	5698	5698	553174
strain	Rothia mucilaginosa DY-18	5591	5591	680646
strain	Veillonella parvula DSM 2008	4748	4748	479436
strain	Corynebacterium callunae DSM 20147	4604	4604	1121353
strain	Haemophilus parainfluenzae T3T1	4280	4280	862965
strain	Neisseria gonorrhoeae TCDC-NG08107	3957	3957	940296
strain	Mycoplasma arthritidis 158L3-1	3584	3584	243272
strain	Porphyromonas asaccharolytica DSM 20707	3063	3063	879243
strain	Serratia marcescens WW4	3006	3006	435998
strain	Fusobacterium nucleatum subsp. animalis 4_8	2573	2573	469607
strain	Capnocytophaga ochracea DSM 7271	2427	2427	521097
strain	Mycoplasma hyopneumoniae 232	2407	2407	295358
strain	Neisseria meningitidis G2136	2063	2063	935599
strain	Haemophilus influenzae KR494	1917	1917	1334187
strain	Mycoplasma hominis ATCC 23114	1853	1853	347256
strain	Serratia marcescens FGI94	1665	1665	1249634
strain	Influenza A virus (A/New York/392/2004(H3N2))	1539	1539	335341
strain	Tannerella forsythia ATCC 43037	1428	1428	203275
strain	Hahella chejuensis KCTC 2396	1334	1334	349521
strain	Bacillus thuringiensis MC28	1323	1323	1195464
strain	Rothia dentocariosa ATCC 17931	1168	1168	762948
strain	Neisseria lactamica 020-06	1158	1158	489653
strain	Fusobacterium nucleatum subsp. vincentii 3_1_36A2	1132	1132	469604
strain	Fusobacterium nucleatum subsp. nucleatum ATCC 25586	1126	1126	190304
strain	Corynebacterium resistens DSM 45100	810	810	662755
strain	Lactobacillus gasseri ATCC 33323	806	806	324831
strain	Prevotella sp. oral taxon 299 str. F0039	719	719	575614
strain	Corynebacterium argentoratense DSM 44202	673	673	1348662
strain	Haemophilus influenzae 86-028NP	659	659	281310
strain	Prevotella denticola F0289	631	631	767031
strain	Escherichia coli O157:H7 str. EC4115	617	617	444450
strain	Haemophilus influenzae PittEE	521	521	374930
strain	Natronococcus occultus SP4	507	507	694430
strain	Providencia stuartii MRSN 2154	464	464	1157951
strain	Prevotella intermedia 17	452	452	246198
strain	Atopobium parvulum DSM 20469	448	448	521095
strain	Anaerococcus prevotii DSM 20548	446	446	525919
strain	Morganella morganii subsp. morganii KT	422	422	1124991
strain	Streptococcus mitis B6	421	421	365659
strain	Haemophilus influenzae F3047	413	413	935897
strain	Campylobacter concisus 13826	410	410	360104
strain	Finegoldia magna ATCC 29328	395	395	334413
strain	Streptobacillus moniliformis DSM 12112	393	393	519441
strain	Aggregatibacter aphrophilus NJ8700	374	374	634176
strain	Treponema denticola ATCC 35405	353	353	243275
strain	Leptotrichia buccalis C-1013-b	341	341	523794
strain	Prevotella ruminicola 23	313	313	264731
strain	Treponema brennaborense DSM 12168	305	305	906968
strain	Mycoplasma pulmonis UAB CTIP	291	291	272635
strain	Verminephrobacter eiseniae EF01-2	282	282	391735
strain	Bacteroides vulgatus ATCC 8482	275	275	435590
strain	Treponema pedis str. T A4	272	272	1291379
strain	Propionibacterium avidum 44067	272	272	1170318
strain	Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2	259	259	511995
strain	Capnocytophaga canimorsus Cc5	259	259	860228
strain	Streptococcus oralis Uo5	258	258	927666
strain	Fibrella aestuarina BUZ 2	251	251	1166018
strain	Bacteroides helcogenes P 36-108	239	239	693979
strain	Filifactor alocis ATCC 35896	236	236	546269
strain	Streptococcus parasanguinis FW213	227	227	1114965
strain	Streptococcus suis JS14	213	213	945704
strain	Mycoplasma hyopneumoniae 7422	200	200	754503
strain	Thermanaerovibrio acidaminovorans DSM 6589	189	189	525903
strain	Haemophilus influenzae R2846	182	182	262727
strain	Tropheryma whipplei str. Twist	176	176	203267
strain	Halovivax ruber XH-70	174	174	797302
strain	Collimonas fungivorans Ter331	173	173	1005048
strain	Butyrivibrio proteoclasticus B316	158	158	515622
strain	Prevotella dentalis DSM 3688	157	157	908937
strain	Mycoplasma hyorhinis HUB-1	156	156	872331
strain	Treponema succinifaciens DSM 2489	154	154	869209
strain	Actinobacillus suis H91-0380	154	154	696748
strain	Streptococcus sanguinis SK36	153	153	388919
strain	Human coronavirus OC43	147	147	31631
strain	Sebaldella termitidis ATCC 33386	145	145	526218
strain	Streptococcus parasanguinis ATCC 15912	145	145	760570
strain	Mycoplasma hyopneumoniae 7448	141	141	262722
strain	Streptococcus oligofermentans AS 1.3089	138	138	1302863
strain	Sulfolobus islandicus M.16.27	137	137	427318
strain	Haemophilus parasuis SH0165	135	135	557723
strain	Bdellovibrio bacteriovorus HD100	134	134	264462
strain	Thermodesulfobacterium geofontis OPF15	131	131	795359
strain	Aeromonas hydrophila ML09-119	126	126	1288394
strain	Thermoanaerobacter wiegelii Rt8.B1	125	125	697303
strain	Parabacteroides distasonis ATCC 8503	121	121	435591
strain	Staphylococcus aureus subsp. aureus CN1	118	118	1193576
strain	Streptococcus pseudopneumoniae IS7493	117	117	1054460
strain	Buchnera aphidicola BCc	114	114	372461
strain	Staphylococcus epidermidis ATCC 12228	112	112	176280
strain	Haemophilus influenzae R2866	110	110	262728
strain	Thiomicrospira crunogena XCL-2	109	109	317025
strain	Eubacterium eligens ATCC 27750	106	106	515620
strain	Helicobacter bizzozeronii CIII-1	105	105	1002804
strain	Natrialba magadii ATCC 43099	102	102	547559
strain	Sorangium cellulosum So0157-2	101	101	1254432
strain	Legionella longbeachae NSW150	101	101	661367
strain	ant, tsetse, mealybug, aphid, etc. endosymbionts	101	7	84563
strain	Streptococcus agalactiae 2603V/R	100	100	208435
strain	Olsenella uli DSM 7084	98	98	633147
strain	Stenotrophomonas maltophilia JV3	97	97	868597
strain	Mobiluncus curtisii ATCC 43063	95	95	548479
strain	Campylobacter curvus 525.92	93	93	360105
strain	Lactobacillus sanfranciscensis TMW 1.1304	92	92	714313
strain	Corynebacterium halotolerans YIM 70093 = DSM 44683	89	89	1121362
strain	Stenotrophomonas maltophilia K279a	86	86	522373
strain	Haemophilus influenzae F3031	85	85	866630
strain	Achromobacter xylosoxidans NH44784-1996	85	85	1167634
strain	Taylorella equigenitalis ATCC 35865	84	84	743973
strain	Haemophilus somnus 129PT	82	82	205914
strain	Streptococcus gordonii str. Challis substr. CH1	82	82	467705
strain	Alkalilimnicola ehrlichii MLHE-1	81	81	187272
strain	Rickettsia africae ESF-5	80	80	347255
strain	Bacillus infantis NRRL B-14911	78	78	1367477
strain	Pseudomonas fluorescens A506	69	69	1037911
strain	Stenotrophomonas maltophilia D457	69	69	1163399
strain	Actinobacillus succinogenes 130Z	69	69	339671
strain	Corynebacterium maris DSM 45190	65	65	1224163
strain	Mannheimia succiniciproducens MBEL55E	63	63	221988
strain	Candidatus Liberibacter americanus str. Sao Paulo	63	63	1261131
strain	Proteus mirabilis BB2000	60	60	1266738
strain	Borrelia duttonii Ly	60	60	412419
strain	Lactobacillus rhamnosus GG	58	58	568703
strain	Bibersteinia trehalosi USDA-ARS-USMARC-192	58	58	1171377
strain	Gallibacterium anatis UMN179	57	57	1005058
strain	Sphaerochaeta globosa str. Buddy	54	54	158189
strain	Desulfohalobium retbaense DSM 5692	53	53	485915
strain	Jonesia denitrificans DSM 20603	53	53	471856
strain	Mycoplasma ovis str. Michigan	53	53	1415773
strain	Enterobacter cloacae subsp. cloacae NCTC 9394	52	52	718254
strain	Aminobacterium colombiense DSM 12261	52	52	572547
strain	Proteus mirabilis HI4320	52	52	529507
strain	Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony)	52	52	1142511
strain	Sinorhizobium fredii NGR234	51	51	394
strain	Haliangium ochraceum DSM 14365	50	50	502025
strain	Magnetococcus marinus MC-1	49	49	156889
strain	Haemophilus influenzae 10810	49	49	862964
strain	Haemophilus influenzae PittGG	48	48	374931
strain	Thermoanaerobacter tengcongensis MB4	48	48	273068
strain	Burkholderia cenocepacia MC0-3	47	47	406425
strain	Mycoplasma genitalium M6282	47	47	662946
strain	Mycoplasma hyorhinis SK76	47	47	1118964
strain	Micrococcus luteus NCTC 2665	46	46	465515
strain	Pseudomonas fulva 12-X	46	46	743720
strain	Crinalium epipsammum PCC 9333	45	45	1173022
strain	Staphylococcus aureus subsp. aureus JH1	45	45	359787
strain	Clostridiales genomosp. BVAB3 str. UPII9-5	44	44	699246
strain	Borrelia crocidurae str. Achema	44	44	1155096
strain	Escherichia coli ABU 83972	43	43	655817
strain	Megamonas hypermegale ART12/1	43	43	657316
strain	Mycoplasma synoviae 53	42	42	262723
strain	Enterococcus faecalis 62	42	42	936153
strain	Ruminococcus albus 7	41	41	697329
strain	Oscillibacter valericigenes Sjm18-20	40	40	693746
strain	Pelobacter propionicus DSM 2379	39	39	338966
strain	Methanococcus vannielii SB	39	39	406327
strain	Ochrobactrum anthropi ATCC 49188	38	38	439375
strain	Alistipes finegoldii DSM 17242	38	38	679935
strain	Citrobacter rodentium ICC168	38	38	637910
strain	Streptococcus infantarius subsp. infantarius CJ18	37	37	1069533
strain	Helicobacter pylori B38	37	37	592205
strain	Megasphaera elsdenii DSM 20460	37	37	1064535
strain	Pseudomonas denitrificans ATCC 13867	36	36	1294143
strain	Thermoanaerobacter italicus Ab9	36	36	580331
strain	Arthrobacter arilaitensis Re117	36	36	861360
strain	Clostridium phytofermentans ISDg	35	35	357809
strain	Escherichia coli UMN026	34	34	585056
strain	Campylobacter hominis ATCC BAA-381	33	33	360107
strain	Eubacterium siraeum V10Sc8a	33	33	717961
strain	Owenweeksia hongkongensis DSM 17368	33	33	926562
strain	Pseudomonas syringae pv. phaseolicola 1448A	33	33	264730
strain	Mycoplasma conjunctivae HRC/581	32	32	572263
strain	Parachlamydia acanthamoebae UV-7	32	32	765952
strain	Marinitoga piezophila KA3	31	31	443254
strain	Kribbella flavida DSM 17836	31	31	479435
strain	Salmonella enterica subsp. enterica serovar Agona	31	26	58095
strain	Lawsonia intracellularis N343	30	30	1234378
strain	Erysipelothrix rhusiopathiae str. Fujisawa	29	29	650150
strain	Stenotrophomonas maltophilia R551-3	29	29	391008
strain	Salmonella enterica subsp. arizonae serovar 62:z4,z23:- str. RSK2980	29	29	882884
strain	Ilyobacter polytropus DSM 2926	28	28	572544
strain	Streptococcus salivarius JIM8777	28	28	347253
strain	Lactobacillus ruminis ATCC 27782	28	28	1069534
strain	Candidatus Riesia pediculicola USDA	27	27	515618
strain	Selenomonas sputigena ATCC 35185	27	27	546271
strain	Kineococcus radiotolerans SRS30216 = ATCC BAA-149	27	27	266940
strain	Lactobacillus crispatus ST1	26	26	748671
strain	Geobacillus thermoleovorans CCB_US3_UF5	26	26	1111068
strain	Rhizobium/Agrobacterium group	26	1	227290
strain	Escherichia coli O104:H4	25	1	1038927
strain	Saccharomonospora viridis DSM 43017	25	25	471857
strain	Haemophilus influenzae Rd KW20	24	24	71421
strain	Escherichia coli IAI1	24	24	585034
strain	Methanosarcina barkeri str. Fusaro	24	24	269797
strain	Rhizobium leguminosarum bv. viciae 3841	24	24	216596
strain	Paenibacillus mucilaginosus K02	24	24	997761
strain	Sanguibacter keddieii DSM 10542	23	23	446469
strain	Flavobacterium indicum GPTSA100-9	23	23	1094466
strain	Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis	23	23	36870
strain	Acidaminococcus fermentans DSM 20731	22	22	591001
strain	Bacillus cereus E33L	21	21	288681
strain	Haemophilus ducreyi 35000HP	21	21	233412
strain	Pseudomonas aeruginosa RP73	20	20	1340851
strain	Buchnera aphidicola str. Bp (Baizongia pistaciae)	20	20	224915
strain	Xylella fastidiosa 9a5c	20	20	160492
strain	Desulfococcus oleovorans Hxd3	20	20	96561
strain	Clostridium cf. saccharolyticum K10	20	20	717608
strain	Tropheryma whipplei TW08/27	20	20	218496
strain	Aggregatibacter actinomycetemcomitans ANH9381	20	20	754507
strain	Pyrolobus fumarii 1A	20	20	694429
strain	Haemophilus parasuis ZJ0906	19	19	1322346
strain	Acidothermus cellulolyticus 11B	18	18	351607
strain	Methanococcus voltae A3	18	18	456320
strain	Shewanella baltica OS117	18	18	693970
strain	Psychromonas ingrahamii 37	18	18	357804
strain	Pseudoxanthomonas spadix BD-a59	18	18	1045855
strain	Caldicellulosiruptor saccharolyticus DSM 8903	17	17	351627
strain	Pantoea ananatis LMG 20103	17	17	706191
strain	Methanothermus fervidus DSM 2088	17	17	523846
strain	Pasteurella multocida subsp. multocida str. Pm70	17	17	272843
strain	Molluscum contagiosum virus subtype 1	16	16	10280
strain	Thermosediminibacter oceani DSM 16646	16	16	555079
strain	Heliobacterium modesticaldum Ice1	16	16	498761
strain	Dickeya dadantii 3937	16	16	198628
strain	Methylobacterium radiotolerans JCM 2831	15	15	426355
strain	Rhodopseudomonas palustris BisB5	15	15	316057
strain	Actinobacillus pleuropneumoniae serovar 5b str. L20	15	15	416269
strain	Klebsiella pneumoniae JM45	15	15	1380908
strain	Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921	15	15	1271862
strain	Acetobacter pasteurianus 386B	15	15	1266844
strain	Streptococcus suis 98HAH33	14	14	391296
strain	Laribacter hongkongensis HLHK9	14	14	557598
strain	Pseudomonas stutzeri DSM 10701	14	14	1123519
strain	Pedobacter saltans DSM 12145	14	14	762903
strain	Corynebacterium diphtheriae HC03	14	14	698969
strain	Acinetobacter calcoaceticus PHEA-2	14	14	871585
strain	Marivirga tractuosa DSM 4126	14	14	643867
strain	Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)	14	14	572265
strain	Cellvibrio japonicus Ueda107	14	14	498211
strain	Glaciecola nitratireducens FR1064	14	14	1085623
strain	Dichelobacter nodosus VCS1703A	14	14	246195
strain	Geobacter uraniireducens Rf4	14	14	351605
strain	Candidatus Carsonella ruddii CE isolate Thao2000	14	14	1202536
strain	Methylomicrobium alcaliphilum 20Z	13	13	1091494
strain	Yersinia pseudotuberculosis IP 31758	13	13	349747
strain	[Eubacterium] cylindroides T2-87	13	13	717960
strain	Vibrio cholerae O1	13	2	127906
strain	Serratia symbiotica str. 'Cinara cedri'	13	13	568817
strain	Ralstonia solanacearum CMR15	12	12	859655
strain	Acidithiobacillus ferrivorans SS3	12	12	743299
strain	Vibrio cholerae LMA3984-4	12	12	935297
strain	Acinetobacter baumannii BJAB0715	12	12	1096996
strain	Streptococcus equi subsp. zooepidemicus ATCC 35246	12	12	1051072
strain	Prochlorococcus marinus str. MIT 9215	12	12	93060
strain	Kangiella koreensis DSM 16069	12	12	523791
strain	Shimwellia blattae DSM 4481 = NBRC 105725	12	12	630626
strain	Klebsiella pneumoniae KCTC 2242	12	12	1049565
strain	Enterobacter lignolyticus SCF1	12	12	701347
strain	Streptococcus agalactiae ILRI005	12	12	1309807
strain	Selenomonas ruminantium subsp. lactilytica TAM6421	12	12	927704
strain	Campylobacter jejuni subsp. jejuni PT14	12	12	1201032
strain	Burkholderiales Genera incertae sedis	12	3	224471
strain	Haliscomenobacter hydrossis DSM 1100	12	12	760192
strain	Sodalis glossinidius str. 'morsitans'	12	12	343509
strain	Staphylococcus aureus subsp. aureus ST228	11	11	1074919
strain	Ruminococcus bromii L2-63	11	11	657321
strain	Methanosaeta harundinacea 6Ac	11	11	1110509
strain	Escherichia coli O104:H4 str. 2011C-3493	11	11	1133852
strain	Staphylococcus aureus 08BA02176	11	11	1229492
strain	Mycoplasma cynos C142	11	11	1246955
strain	Salmonella enterica subsp. enterica serovar Typhi	11	2	90370
strain	Paenibacillus mucilaginosus 3016	10	10	1116391
strain	Methanobrevibacter ruminantium M1	10	10	634498
strain	Pectobacterium carotovorum subsp. carotovorum PCC21	10	10	1218933
strain	Bifidobacterium thermophilum RBL67	10	10	1254439
strain	Xenorhabdus nematophila ATCC 19061	10	10	406817
strain	Acinetobacter baumannii AB307-0294	10	10	557600
strain	Pseudomonas putida DOT-T1E	10	10	1196325
strain	Neisseria meningitidis alpha710	9	9	630588
strain	Buchnera aphidicola str. Ak (Acyrthosiphon kondoi)	9	9	1005090
strain	Borrelia recurrentis A1	9	9	412418
strain	Dickeya dadantii Ech703	9	9	579405
strain	Escherichia coli E24377A	9	9	331111
strain	Escherichia coli HS	9	9	331112
strain	Methylococcus capsulatus str. Bath	9	9	243233
strain	Lactobacillus kefiranofaciens ZW3	9	9	1033837
strain	Arcanobacterium haemolyticum DSM 20595	9	9	644284
strain	Escherichia coli Xuzhou21	9	9	741093
strain	Solitalea canadensis DSM 3403	9	9	929556
strain	Escherichia coli O104:H4 str. 2009EL-2050	9	9	1134782
strain	Buchnera aphidicola (Acyrthosiphon pisum)	8	1	118099
strain	Frateuria aurantia DSM 6220	8	8	767434
strain	Enterobacter cloacae subsp. cloacae ENHKU01	8	8	1211025
strain	'Nostoc azollae' 0708	8	8	551115
strain	Helicobacter pylori J99	8	8	85963
strain	Lactobacillus rhamnosus LOCK900	8	8	1316933
strain	Desulfitobacterium dichloroeliminans LMG P-21439	8	8	871963
strain	Candidatus Liberibacter solanacearum CLso-ZC1	8	8	658172
strain	Aggregatibacter actinomycetemcomitans D11S-1	8	8	668336
strain	Methanobrevibacter smithii ATCC 35061	8	8	420247
strain	Enterococcus casseliflavus EC20	8	8	565655
strain	Candidatus Hodgkinia cicadicola Dsem	8	8	573234
strain	Candidatus Symbiobacter mobilis CR	8	8	946483
strain	Staphylococcus carnosus subsp. carnosus TM300	7	7	396513
strain	Aeromonas veronii B565	7	7	998088
strain	Xanthomonas campestris pv. raphani 756C	7	7	990315
strain	Acinetobacter baumannii AYE	7	7	509173
strain	Edwardsiella ictaluri 93-146	7	7	634503
strain	Staphylococcus aureus subsp. aureus LGA251	7	7	985006
strain	Bacillus thuringiensis YBT-1518	7	7	529122
strain	Persephonella marina EX-H1	7	7	123214
strain	Streptococcus salivarius CCHSS3	7	7	1048332
strain	Corynebacterium glutamicum SCgG2	7	7	1232383
strain	Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)	7	7	713602
strain	Caldilinea aerophila DSM 14535 = NBRC 104270	7	7	926550
strain	Rubrivivax gelatinosus IL144	7	7	983917
strain	Caldicellulosiruptor bescii DSM 6725	7	7	521460
strain	Calothrix sp. PCC 6303	7	7	1170562
strain	Vibrio splendidus LGP32	7	7	575788
strain	Moorella thermoacetica ATCC 39073	7	7	264732
strain	Corynebacterium jeikeium K411	7	7	306537
strain	Caldicellulosiruptor kronotskyensis 2002	7	7	632348
strain	Staphylococcus aureus subsp. aureus TCH60	7	7	548473
strain	Candidatus Sulcia muelleri SMDSEM	7	7	595499
strain	Staphylococcus aureus subsp. aureus ED98	7	7	681288
strain	Buchnera aphidicola (Cinara tujafilina)	7	7	261317
strain	Candidatus Carsonella ruddii HT isolate Thao2000	7	7	1202539
strain	Staphylococcus aureus Bmb9393	7	7	1321369
strain	Staphylococcus haemolyticus JCSC1435	7	7	279808
strain	Shigella sonnei 53G	7	7	216599
strain	Salmonella enterica subsp. enterica serovar Typhimurium str. DT2	6	6	568709
strain	Helicobacter cetorum MIT 99-5656	6	6	1163745
strain	Vibrio campbellii ATCC BAA-1116	6	6	338187
strain	Coraliomargarita akajimensis DSM 45221	6	6	583355
strain	Sphaerobacter thermophilus DSM 20745	6	6	479434
strain	Mycoplasma gallisepticum S6	6	6	1006581
strain	Psychrobacter arcticus 273-4	6	6	259536
strain	Candidatus Zinderia insecticola CARI	6	6	871271
strain	Escherichia coli KO11FL	6	6	595495
strain	Serratia plymuthica S13	6	6	1348660
strain	Mannheimia haemolytica USDA-ARS-USMARC-185	6	6	1249526
strain	Mycoplasma crocodyli MP145	6	6	512564
strain	Baumannia cicadellinicola str. Hc (Homalodisca coagulata)	6	6	374463
strain	Beijerinckia indica subsp. indica ATCC 9039	6	6	395963
strain	Candidatus Blochmannia vafer str. BVAF	6	6	859654
strain	Mycoplasma hyopneumoniae 168-L	6	6	1116211
strain	Staphylococcus aureus subsp. aureus 71193	6	6	1155084
strain	Shewanella frigidimarina NCIMB 400	6	6	318167
strain	Acinetobacter baumannii ACICU	6	6	405416
strain	Yersinia pseudotuberculosis YPIII	6	6	502800
strain	Nautilia profundicola AmH	6	6	598659
strain	Flavobacterium columnare ATCC 49512	5	5	1041826
strain	Ramlibacter tataouinensis TTB310	5	5	365046
strain	Alcanivorax dieselolei B5	5	5	930169
strain	Shigella flexneri 5 str. 8401	5	5	373384
strain	Flavobacterium johnsoniae UW101	5	5	376686
strain	Salmonella enterica subsp. enterica serovar Enteritidis str. P125109	5	5	550537
strain	Bacillus thuringiensis HD-789	5	5	1217737
strain	Escherichia coli O111:H- str. 11128	5	5	585396
strain	Borrelia burgdorferi B31	5	5	224326
strain	Acinetobacter baumannii BJAB0868	5	5	1096997
strain	Meiothermus silvanus DSM 9946	5	5	526227
strain	Acholeplasma laidlawii PG-8A	5	5	441768
strain	Macrococcus caseolyticus JCSC5402	5	5	458233
strain	Salmonella enterica subsp. enterica serovar Agona str. 24249	5	5	1406860
strain	Enterobacter cloacae subsp. dissolvens SDM	5	5	1104326
strain	Anaerobaculum mobile DSM 13181	5	5	891968
strain	Pseudomonas aeruginosa LES431	5	5	1408272
strain	Erwinia billingiae Eb661	5	5	634500
strain	Pectobacterium atrosepticum SCRI1043	5	5	218491
strain	Chromohalobacter salexigens DSM 3043	5	5	290398
strain	Vibrio cholerae O1 str. 2010EL-1786	5	5	914149
strain	Erwinia pyrifoliae Ep1/96	5	5	634499
strain	Halorhodospira halophila SL1	5	5	349124
strain	Salmonella enterica subsp. enterica serovar Typhi str. CT18	5	5	220341
strain	Amphibacillus xylanus NBRC 15112	5	5	698758
strain	Thioalkalimicrobium cyclicum ALM1	5	5	717773
strain	Streptococcus uberis 0140J	5	5	218495
strain	Neisseria gonorrhoeae FA 1090	5	5	242231
strain	Magnetospirillum gryphiswaldense MSR-1 v2	5	5	1430440
strain	Streptococcus pneumoniae TCH8431/19A	5	5	525381
strain	Candidatus Sulcia muelleri GWSS	4	4	444179
strain	Vibrio cholerae IEC224	4	4	1134456
strain	Corynebacterium kroppenstedtii DSM 44385	4	4	645127
strain	Neisseria meningitidis Z2491	4	4	122587
strain	Escherichia coli K-12	4	2	83333
strain	Parvularcula bermudensis HTCC2503	4	4	314260
strain	Methylacidiphilum infernorum V4	4	4	481448
strain	Burkholderia mallei NCTC 10229	4	4	412022
strain	Staphylococcus aureus subsp. aureus TW20	4	4	663951
strain	Lactobacillus casei str. Zhang	4	4	498216
strain	Escherichia coli O55:H7 str. CB9615	4	4	701177
strain	Marinomonas posidonica IVIA-Po-181	4	4	491952
strain	Streptococcus constellatus subsp. pharyngis C232	4	4	696216
strain	Colwellia psychrerythraea 34H	4	4	167879
strain	Escherichia coli O7:K1 str. CE10	4	4	1072459
strain	Pasteurella multocida subsp. multocida str. 3480	4	4	584721
strain	Carboxydothermus hydrogenoformans Z-2901	4	4	246194
strain	Leptospira interrogans serovar Lai str. 56601	4	4	189518
strain	Stackebrandtia nassauensis DSM 44728	4	4	446470
strain	Vibrio vulnificus MO6-24/O	4	4	914127
strain	Thermomonospora curvata DSM 43183	4	4	471852
strain	Pseudomonas brassicacearum subsp. brassicacearum NFM421	4	4	994484
strain	Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12	4	4	1132507
strain	Candidatus Carsonella ruddii CS isolate Thao2000	4	4	1202537
strain	Pirellula staleyi DSM 6068	4	4	530564
strain	Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594	4	4	476213
strain	Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67	4	4	321314
strain	Escherichia coli O104:H4 str. 2009EL-2071	4	4	1133853
strain	Burkholderia mallei NCTC 10247	4	4	320389
strain	Pseudoxanthomonas suwonensis 11-1	4	4	743721
strain	Desulfotomaculum acetoxidans DSM 771	4	4	485916
strain	Coxiella burnetii CbuK_Q154	4	4	434924
strain	Yersinia enterocolitica subsp. palearctica 105.5R(r)	4	4	994476
strain	Nitrobacter hamburgensis X14	3	3	323097
strain	Teredinibacter turnerae T7901	3	3	377629
strain	Pseudomonas aeruginosa B136-33	3	3	1280938
strain	Elusimicrobium minutum Pei191	3	3	445932
strain	Escherichia coli SMS-3-5	3	3	439855
strain	Streptosporangium roseum DSM 43021	3	3	479432
strain	Corynebacterium efficiens YS-314	3	3	196164
strain	Lactobacillus plantarum subsp. plantarum P-8	3	3	767468
strain	Staphylococcus aureus subsp. aureus USA300	3	3	367830
strain	Saccharopolyspora erythraea NRRL 2338	3	3	405948
strain	Staphylococcus aureus RF122	3	3	273036
strain	Candidatus Rickettsia amblyommii str. GAT-30V	3	3	1105111
strain	Robiginitalea biformata HTCC2501	3	3	313596
strain	Halomonas elongata DSM 2581	3	3	768066
strain	Staphylococcus aureus subsp. aureus JKD6159	3	3	869816
strain	Candidatus Carsonella ruddii PC isolate NHV	3	3	1202540
strain	Yersinia pestis biovar Microtus str. 91001	3	3	229193
strain	Streptococcus thermophilus ND03	3	3	767463
strain	Thermobispora bispora DSM 43833	3	3	469371
strain	Streptococcus anginosus C1051	3	3	862970
strain	Tepidanaerobacter acetatoxydans Re1	3	3	1209989
strain	Escherichia coli O55:H7 str. RM12579	3	3	1048689
strain	Streptococcus pneumoniae Hungary19A-6	3	3	487214
strain	Methylocella silvestris BL2	3	3	395965
strain	Lactobacillus sakei subsp. sakei 23K	3	3	314315
strain	Methanosarcina acetivorans C2A	3	3	188937
strain	Porphyromonas gingivalis TDC60	3	3	1030843
strain	Gramella forsetii KT0803	3	3	411154
strain	Yersinia enterocolitica subsp. palearctica Y11	3	3	930944
strain	Thioalkalivibrio sulfidophilus HL-EbGr7	3	3	396588
strain	Thiobacillus denitrificans ATCC 25259	3	3	292415
strain	Psychroflexus torquis ATCC 700755	3	3	313595
strain	Oenococcus oeni PSU-1	3	3	203123
strain	Anaplasma marginale str. Florida	3	3	320483
strain	Escherichia coli W	3	3	566546
strain	Nitrosococcus halophilus Nc 4	3	3	472759
strain	Desulfurispirillum indicum S5	3	3	653733
strain	Staphylococcus aureus subsp. aureus MSSA476	3	3	282459
strain	Bacillus cereus FRI-35	3	3	1217984
strain	Bacillus weihenstephanensis KBAB4	3	3	315730
strain	Shewanella violacea DSS12	3	3	637905
strain	Streptococcus pneumoniae SPNA45	3	3	869309
strain	Erwinia tasmaniensis Et1/99	3	3	465817
strain	Rhodococcus jostii RHA1	3	3	101510
strain	Wolinella succinogenes DSM 1740	3	3	273121
strain	Vibrio cholerae O395	3	3	345073
strain	Thalassolituus oleivorans MIL-1	3	3	1298593
strain	Acidaminococcus intestini RyC-MR95	3	3	568816
strain	Thioflavicoccus mobilis 8321	3	3	765912
strain	Alteromonas macleodii str. 'Balearic Sea AD45'	3	3	1004787
strain	Bacillus subtilis BSn5	3	3	936156
strain	Sorangium cellulosum So ce56	3	3	448385
strain	Brachyspira murdochii DSM 12563	3	3	526224
strain	Aerococcus urinae ACS-120-V-Col10a	3	3	866775
strain	Geobacillus thermoglucosidasius C56-YS93	3	3	634956
strain	Vibrio cholerae M66-2	3	3	579112
strain	Enterobacter cloacae EcWSU1	3	3	1045856
strain	Xanthomonas campestris pv. campestris str. B100	2	2	509169
strain	Bacteroides salanitronis DSM 18170	2	2	667015
strain	Photobacterium profundum SS9	2	2	298386
strain	Pseudomonas poae RE*1-1-14	2	2	1282356
strain	Escherichia coli ED1a	2	2	585397
strain	Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67	2	2	1225522
strain	Methanosarcina mazei Tuc01	2	2	1236903
strain	Carnobacterium maltaromaticum LMA28	2	2	1234679
strain	Thermomicrobium roseum DSM 5159	2	2	309801
strain	Herbaspirillum seropedicae SmR1	2	2	757424
strain	Acinetobacter baumannii 1656-2	2	2	696749
strain	Candidatus Sulcia muelleri str. Sulcia-ALF	2	2	1343076
strain	Coriobacterium glomerans PW2	2	2	700015
strain	Candidatus Carsonella ruddii HC isolate Thao2000	2	2	1202538
strain	Spiroplasma diminutum CUAS-1	2	2	1276221
strain	Bacillus pumilus SAFR-032	2	2	315750
strain	Buchnera aphidicola str. Sg (Schizaphis graminum)	2	2	198804
strain	Haloquadratum walsbyi DSM 16790	2	2	362976
strain	Escherichia coli str. K-12 substr. DH10B	2	2	316385
strain	Pantoea vagans C9-1	2	2	712898
strain	Croceibacter atlanticus HTCC2559	2	2	216432
strain	Klebsiella pneumoniae CG43	2	2	1244085
strain	Simiduia agarivorans SA1 = DSM 21679	2	2	1117647
strain	Rhodomicrobium vannielii ATCC 17100	2	2	648757
strain	Thiocystis violascens DSM 198	2	2	765911
strain	Thermodesulfatator indicus DSM 15286	2	2	667014
strain	Oscillatoria acuminata PCC 6304	2	2	56110
strain	Corynebacterium pseudotuberculosis 31	2	2	1087451
strain	Mycobacterium tuberculosis CAS/NITR204	2	2	1310114
strain	Spiribacter salinus M19-40	2	2	1260251
strain	Ehrlichia ruminantium str. Welgevonden	2	2	254945
strain	Lactobacillus casei ATCC 334	2	2	321967
strain	Delftia acidovorans SPH-1	2	2	398578
strain	Mycoplasma parvum str. Indiana	2	2	1403316
strain	Salmonella bongori NCTC 12419	2	2	218493
strain	Vibrio cholerae MJ-1236	2	2	593588
strain	Salmonella enterica subsp. enterica serovar Cubana str. CFSAN002050	2	2	1271863
strain	Klebsiella variicola At-22	2	2	640131
strain	Alkaliphilus metalliredigens QYMF	2	2	293826
strain	Pseudomonas aeruginosa MTB-1	2	2	1415629
strain	Yersinia pseudotuberculosis IP 32953	2	2	273123
strain	Weeksella virosa DSM 16922	2	2	865938
strain	Cronobacter sakazakii SP291	2	2	956149
strain	Tsukamurella paurometabola DSM 20162	2	2	521096
strain	Equine coronavirus	2	2	136187
strain	Fluviicola taffensis DSM 16823	2	2	755732
strain	Desulfovibrio gigas DSM 1382 = ATCC 19364	2	2	1121448
strain	Streptomyces flavogriseus ATCC 33331	2	2	591167
strain	Eubacterium rectale ATCC 33656	2	2	515619
strain	Bacteriovorax marinus SJ	2	2	862908
strain	Bacillus halodurans C-125	2	2	272558
strain	Pseudomonas stutzeri ATCC 17588 = LMG 11199	2	2	96563
strain	Salmonella enterica subsp. enterica serovar Heidelberg str. B182	2	2	1160717
strain	Flexibacter litoralis DSM 6794	2	2	880071
strain	Bacillus thuringiensis serovar finitimus YBT-020	2	2	930170
strain	Cardinium endosymbiont cEper1 of Encarsia pergandiella	2	2	1231626
strain	Anoxybacillus flavithermus WK1	2	2	491915
strain	Ureaplasma parvum serovar 3	2	2	38504
strain	Lactobacillus reuteri TD1	2	2	1358027
strain	Neisseria meningitidis M04-240196	2	2	935593
strain	Chamaesiphon minutus PCC 6605	2	2	1173020
strain	Gemmatimonas aurantiaca T-27	2	2	379066
strain	Bradyrhizobium oligotrophicum S58	2	2	1245469
strain	Staphylococcus epidermidis RP62A	2	2	176279
strain	Helicobacter pylori Aklavik117	2	2	1055531
strain	Streptococcus suis 05ZYH33	2	2	391295
strain	Pelobacter carbinolicus DSM 2380	2	2	338963
strain	Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1	2	2	990282
strain	Runella slithyformis DSM 19594	2	2	761193
strain	Neisseria gonorrhoeae NCCP11945	2	2	521006
strain	Nitrosospira multiformis ATCC 25196	2	2	323848
strain	Helicobacter cetorum MIT 00-7128	2	2	182217
strain	Thermodesulfobium narugense DSM 14796	2	2	747365
strain	Staphylococcus aureus subsp. aureus T0131	2	2	1006543
strain	Candidatus Liberibacter asiaticus str. gxpsy	2	2	1174529
strain	Mycoplasma bovis PG45	2	2	289397
strain	Candidatus Kinetoplastibacterium oncopeltii TCC290E	2	2	1208920
strain	Escherichia coli SE11	2	2	409438
strain	Tetragenococcus halophilus NBRC 12172	2	2	945021
strain	Influenza A virus (A/Korea/426/1968(H2N2))	2	2	488241
strain	Acinetobacter baumannii ATCC 17978	2	2	400667
strain	Truepera radiovictrix DSM 17093	2	2	649638
strain	Methanoregula boonei 6A8	2	2	456442
strain	Streptomyces venezuelae ATCC 10712	2	2	953739
strain	Dyadobacter fermentans DSM 18053	2	2	471854
strain	Mycoplasma mycoides subsp. mycoides SC str. PG1	2	2	272632
strain	Streptococcus thermophilus LMD-9	2	2	322159
strain	Photorhabdus luminescens subsp. laumondii TTO1	2	2	243265
strain	Aquifex aeolicus VF5	2	2	224324
strain	Streptococcus suis D12	2	2	1004952
strain	Segniliparus rotundus DSM 44985	2	2	640132
strain	Streptococcus dysgalactiae subsp. equisimilis RE378	2	2	617121
strain	Francisella tularensis subsp. holarctica OSU18	2	2	393011
strain	Lactobacillus johnsonii DPC 6026	2	2	909954
strain	Desulfovibrio magneticus RS-1	2	2	573370
strain	Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601	2	2	554290
strain	Acinetobacter baumannii SDF	2	2	509170
strain	Bacillus amyloliquefaciens DSM 7	1	1	692420
strain	Helicobacter hepaticus ATCC 51449	1	1	235279
strain	Sulfurospirillum deleyianum DSM 6946	1	1	525898
strain	Methanotorris igneus Kol 5	1	1	880724
strain	Bifidobacterium asteroides PRL2011	1	1	1147128
strain	Natranaerobius thermophilus JW/NM-WN-LF	1	1	457570
strain	Bartonella australis Aust/NH1	1	1	1094489
strain	Mycoplasma agalactiae PG2	1	1	347257
strain	Spirochaeta thermophila DSM 6192	1	1	665571
strain	Bacillus thuringiensis serovar kurstaki str. HD73	1	1	1279365
strain	Arcobacter nitrofigilis DSM 7299	1	1	572480
strain	Streptococcus pneumoniae CGSP14	1	1	516950
strain	Ferrimonas balearica DSM 9799	1	1	550540
strain	Acidiphilium multivorum AIU301	1	1	926570
strain	Pseudomonas syringae pv. syringae B728a	1	1	205918
strain	Burkholderia multivorans ATCC 17616	1	1	395019
strain	Phycisphaera mikurensis NBRC 102666	1	1	1142394
strain	Streptococcus thermophilus JIM 8232	1	1	1051074
strain	Ammonifex degensii KC4	1	1	429009
strain	Candidatus Desulforudis audaxviator MP104C	1	1	477974
strain	Citrobacter koseri ATCC BAA-895	1	1	290338
strain	Streptococcus macedonicus ACA-DC 198	1	1	1116231
strain	Marinithermus hydrothermalis DSM 14884	1	1	869210
strain	Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91	1	1	550538
strain	Chlorobaculum parvum NCIB 8327	1	1	517417
strain	Paludibacter propionicigenes WB4	1	1	694427
strain	Escherichia coli ETEC H10407	1	1	316401
strain	Bacillus subtilis subsp. spizizenii str. W23	1	1	655816
strain	Mycoplasma hyorhinis MCLD	1	1	936139
strain	Clostridium novyi NT	1	1	386415
strain	Prochlorococcus marinus str. MIT 9312	1	1	74546
strain	Enterobacter cloacae subsp. cloacae ATCC 13047	1	1	716541
strain	Natronobacterium gregoryi SP2	1	1	797304
strain	Xanthomonas campestris pv. campestris str. 8004	1	1	314565
strain	Lactococcus lactis subsp. lactis IO-1	1	1	1046624
strain	Achromobacter xylosoxidans A8	1	1	762376
strain	Brevibacillus brevis NBRC 100599	1	1	358681
strain	Lactobacillus reuteri DSM 20016	1	1	557436
strain	Calditerrivibrio nitroreducens DSM 19672	1	1	768670
strain	Corynebacterium urealyticum DSM 7111	1	1	1267754
strain	Maricaulis maris MCS10	1	1	394221
strain	Singulisphaera acidiphila DSM 18658	1	1	886293
strain	Blattabacterium sp. (Blattella germanica) str. Bge	1	1	331104
strain	Bacillus amyloliquefaciens subsp. plantarum AS43.3	1	1	1225788
strain	Paenibacillus polymyxa E681	1	1	349520
strain	Candidatus Puniceispirillum marinum IMCC1322	1	1	488538
strain	Desulfotomaculum carboxydivorans CO-1-SRB	1	1	868595
strain	Candidatus Endolissoclinum faulkneri L2	1	1	1193729
strain	Prochlorococcus marinus str. NATL2A	1	1	59920
strain	Desulfatibacillum alkenivorans AK-01	1	1	439235
strain	Mycoplasma gallisepticum WI01_2001.043-13-2P	1	1	1159201
strain	Cupriavidus taiwanensis LMG 19424	1	1	977880
strain	Flavobacterium branchiophilum FL-15	1	1	1034807
strain	Escherichia coli O83:H1 str. NRG 857C	1	1	685038
strain	Bacillus cereus 03BB102	1	1	572264
strain	Bacillus amyloliquefaciens LFB112	1	1	1415165
strain	Shigella flexneri 2002017	1	1	591020
strain	Staphylococcus aureus CA-347	1	1	1323661
strain	Gloeobacter kilaueensis JS1	1	1	1183438
strain	Staphylococcus lugdunensis HKU09-01	1	1	698737
strain	Serratia proteamaculans 568	1	1	399741
strain	Mesotoga prima MesG1.Ag.4.2	1	1	660470
strain	Eggerthella lenta DSM 2243	1	1	479437
strain	Nonlabens dokdonensis DSW-6	1	1	592029
strain	Syntrophus aciditrophicus SB	1	1	56780
strain	Frankia alni ACN14a	1	1	326424
strain	Rubrobacter xylanophilus DSM 9941	1	1	266117
strain	Glaciecola psychrophila 170	1	1	1129794
strain	Rhodospirillum photometricum DSM 122	1	1	1150469
strain	Pasteurella multocida 36950	1	1	1075089
strain	Propionibacterium acnes ATCC 11828	1	1	1091045
strain	Staphylococcus aureus 04-02981	1	1	703339
strain	Candidatus Carsonella ruddii DC	1	1	667013
strain	Shigella dysenteriae Sd197	1	1	300267
strain	Haemophilus somnus 2336	1	1	228400
strain	Bifidobacterium bifidum PRL2010	1	1	702459
strain	Methanothermococcus okinawensis IH1	1	1	647113
strain	Thermacetogenium phaeum DSM 12270	1	1	1089553
strain	Roseburia hominis A2-183	1	1	585394
strain	Candidatus Carsonella ruddii PV	1	1	387662
strain	Flexistipes sinusarabici DSM 4947	1	1	717231
strain	Gordonibacter pamelaeae 7-10-1-b	1	1	657308
strain	Cyanobium gracile PCC 6307	1	1	292564
strain	Brachyspira intermedia PWS/A	1	1	1045858
strain	Shigella boydii CDC 3083-94	1	1	344609
strain	Candidatus Accumulibacter phosphatis clade IIA str. UW-1	1	1	522306
strain	Pseudomonas stutzeri CCUG 29243	1	1	1196835
strain	Xylella fastidiosa M12	1	1	405440
strain	Escherichia coli 536	1	1	362663
strain	Bacillus subtilis PY79	1	1	1415167
strain	Clostridium difficile 2007855	1	1	699033
strain	Streptococcus anginosus C238	1	1	862971
strain	Streptococcus parauberis KCTC 11537	1	1	936154
strain	Hyphomonas neptunium ATCC 15444	1	1	228405
strain	Yersinia pestis biovar Medievalis str. Harbin 35	1	1	547048
strain	Pseudoalteromonas haloplanktis TAC125	1	1	326442
strain	Aromatoleum aromaticum EbN1	1	1	76114
strain	Candidatus Tremblaya phenacola PAVE	1	1	1266371
strain	Halothiobacillus neapolitanus c2	1	1	555778
strain	Escherichia coli O157:H7 str. EDL933	1	1	155864
strain	Staphylococcus lugdunensis N920143	1	1	1034809
strain	Escherichia coli DH1	1	1	536056
strain	Streptococcus pyogenes serotype M12	1	1	342023
strain	Enterococcus faecalis D32	1	1	1206105
strain	Echinicola vietnamensis DSM 17526	1	1	926556
strain	Vibrio fischeri MJ11	1	1	388396
strain	Lactobacillus buchneri CD034	1	1	1071400
strain	Rhodococcus erythropolis PR4	1	1	234621
strain	Salmonella enterica subsp. enterica serovar Typhimurium str. T000240	1	1	718274
strain	Raoultella ornithinolytica B6	1	1	1286170
strain	Rahnella aquatilis HX2	1	1	1151116
strain	Dehalogenimonas lykanthroporepellens BL-DC-9	1	1	552811
strain	Listeria ivanovii subsp. ivanovii PAM 55	1	1	881621
strain	Bacillus cereus biovar anthracis str. CI	1	1	637380
strain	Spirochaeta smaragdinae DSM 11293	1	1	573413
strain	Thermincola potens JR	1	1	635013
strain	Clostridium beijerinckii NCIMB 8052	1	1	290402
strain	Salmonella enterica subsp. enterica serovar Typhimurium str. 798	1	1	1008297
strain	Azospirillum brasilense Sp245	1	1	1064539
strain	Clostridium botulinum F	1	1	36831
strain	Streptococcus pasteurianus ATCC 43144	1	1	981540
strain	Sphaerochaeta pleomorpha str. Grapes	1	1	158190
strain	Pseudomonas mendocina ymp	1	1	399739
strain	Buchnera aphidicola str. Ua (Uroleucon ambrosiae)	1	1	1005057
strain	Microlunatus phosphovorus NM-1	1	1	1032480
strain	Vibrio vulnificus CMCP6	1	1	216895
strain	Corynebacterium urealyticum DSM 7109	1	1	504474
strain	Mannheimia haemolytica USDA-ARS-USMARC-183	1	1	1249531
strain	Geodermatophilus obscurus DSM 43160	1	1	526225
strain	Solibacillus silvestris StLB046	1	1	1002809
strain	Desulfurivibrio alkaliphilus AHT2	1	1	589865
strain	Ruminococcus torques L2-14	1	1	657313
strain	Microcystis aeruginosa NIES-843	1	1	449447
strain	Lactobacillus paracasei subsp. paracasei 8700:2	1	1	537973
strain	Stigmatella aurantiaca DW4/3-1	1	1	378806
strain	Phenylobacterium zucineum HLK1	1	1	450851
strain	Kytococcus sedentarius DSM 20547	1	1	478801
strain	Staphylococcus aureus subsp. aureus NCTC 8325	1	1	93061
strain	Nakamurella multipartita DSM 44233	1	1	479431
strain	Streptococcus pyogenes MGAS15252	1	1	798300
strain	Escherichia coli UMNK88	1	1	696406
strain	Cyclobacterium marinum DSM 745	1	1	880070
strain	Thioalkalivibrio nitratireducens DSM 14787	1	1	1255043
strain	Ralstonia eutropha H16	1	1	381666
strain	Methylotenera versatilis 301	1	1	666681
strain	Bifidobacterium animalis subsp. lactis AD011	1	1	442563
strain	Escherichia coli PMV-1	1	1	1382700
strain	Gallionella capsiferriformans ES-2	1	1	395494
strain	Clostridium difficile M68	1	1	699037
strain	Staphylothermus marinus F1	1	1	399550
strain	Chlorobium phaeobacteroides DSM 266	1	1	290317
strain	Staphylococcus aureus subsp. aureus HO 5096 0412	1	1	1074252
strain	Anabaena cylindrica PCC 7122	1	1	272123
strain	Enterococcus faecalis V583	1	1	226185
strain	Methanocaldococcus vulcanius M7	1	1	579137
strain	Cellulophaga algicola DSM 14237	1	1	688270
strain	Acinetobacter oleivorans DR1	1	1	436717
strain	Bifidobacterium adolescentis ATCC 15703	1	1	367928
strain	Candidatus Nitrososphaera gargensis Ga9.2	1	1	1237085
strain	Dickeya dadantii Ech586	1	1	590409
strain	Starkeya novella DSM 506	1	1	639283
strain	Burkholderia rhizoxinica HKI 454	1	1	882378
strain	Pantoea ananatis PA13	1	1	1095774
strain	Clostridium stercorarium subsp. stercorarium DSM 8532	1	1	1121335
strain	Desulfovibrio alaskensis G20	1	1	207559
strain	Chlamydia pecorum W73	1	1	1234368
strain	Listeria monocytogenes ATCC 19117	1	1	882095
strain	Candidatus Solibacter usitatus Ellin6076	1	1	234267
strain	Weissella koreensis KACC 15510	1	1	1045854
strain	Pandoraea pnomenusa 3kgm	1	1	1416914
strain	Escherichia coli 55989	1	1	585055
strain	Salmonella enterica subsp. enterica serovar Heidelberg str. SL476	1	1	454169
strain	Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305	1	1	342451
strain	Acinetobacter baumannii D1279779	1	1	945556
strain	Clostridium clariflavum DSM 19732	1	1	720554
strain	Bacillus cellulosilyticus DSM 2522	1	1	649639
strain	Beutenbergia cavernae DSM 12333	1	1	471853
strain	Pseudomonas aeruginosa PA7	1	1	381754
strain	Mycobacterium bovis BCG	1	1	33892
strain	Methylibium petroleiphilum PM1	1	1	420662
strain	Mycobacterium canettii CIPT 140070008	1	1	1205675
strain	Stanieria cyanosphaera PCC 7437	1	1	111780
strain	Bacillus subtilis subsp. natto BEST195	1	1	645657
strain	Faecalibacterium prausnitzii SL3/3	1	1	657322
strain	Candidatus Nasuia deltocephalinicola str. NAS-ALF	1	1	1343077
strain	Neisseria meningitidis WUE 2594	1	1	942513
strain	Shigella sonnei Ss046	1	1	300269
strain	Propionibacterium propionicum F0230a	1	1	767029
strain	Asticcacaulis excentricus CB 48	1	1	573065
strain	Mannheimia haemolytica M42548	1	1	1316932
strain	Staphylococcus aureus subsp. aureus 6850	1	1	1392476
strain	Emticicia oligotrophica DSM 17448	1	1	929562
strain	Nitrosomonas eutropha C91	1	1	335283
strain	Acinetobacter baumannii ZW85-1	1	1	1400867
strain	Comamonas testosteroni CNB-2	1	1	688245
strain	Clostridium difficile 630	1	1	272563
strain	Desulfobacula toluolica Tol2	1	1	651182
strain	Streptococcus dysgalactiae subsp. equisimilis GGS_124	1	1	486410
strain	Candidatus Midichloria mitochondrii IricVA	1	1	696127
strain	Enterobacter aerogenes EA1509E	1	1	935296
strain	Halobacillus halophilus DSM 2266	1	1	866895
strain	Desulfotomaculum ruminis DSM 2154	1	1	696281
strain	Flavobacterium psychrophilum JIP02/86	1	1	402612
strain	Syntrophobacter fumaroxidans MPOB	1	1	335543
strain	Streptococcus agalactiae SA20-06	1	1	1231389
strain	Neisseria meningitidis alpha14	1	1	662598
strain	Leuconostoc carnosum JB16	1	1	1229758
no rank	cellular organisms	1152549	649	131567
no rank	ssDNA viruses	116686	0	29258
no rank	ssRNA viruses	100259	0	439488
no rank	ssRNA positive-strand viruses, no DNA stage	69037	0	35278
no rank	ssRNA negative-strand viruses	31222	0	35301
no rank	dsDNA viruses, no RNA stage	9304	23	35237
no rank	Clostridiales incertae sedis	1143	0	538999
no rank	unclassified Micrococcineae	955	0	577468
no rank	unclassified Bacteria	423	0	2323
no rank	Bacillales incertae sedis	117	0	539002
no rank	unclassified Alphaproteobacteria	97	0	82117
no rank	unclassified Betabaculovirus	85	0	342107
no rank	unclassified Clostridiales	81	0	186813
no rank	unclassified Gammaproteobacteria	50	0	118884
no rank	unclassified Betaproteobacteria	39	0	119066
no rank	Shrimp white spot syndrome virus	37	37	92652
no rank	unclassified Burkholderiales	12	0	119065
no rank	Enterobacteria phage G4 clade	10	3	374842
no rank	unclassified Rhizobiales	8	0	119042
no rank	sulfur-oxidizing symbionts	7	7	32036
no rank	Candidatus Baumannia	6	0	198346
no rank	unclassified Bacteria (miscellaneous)	4	0	49928
no rank	unclassified Deltaproteobacteria	4	0	45456
no rank	unclassified Verrucomicrobia	4	0	326457
no rank	unclassified Siphoviridae	3	2	196894
no rank	Thermobaculum terrenum ATCC BAA-798	3	3	525904
no rank	Alteromonadales genera incertae sedis	3	0	256005
no rank	unclassified Nucleopolyhedrovirus	3	0	328432
no rank	unclassified Bacteroidetes	2	0	171558
no rank	unclassified Enterobacteria phage G4 clade	2	0	512009
no rank	unclassified Ascovirus	2	0	328613
no rank	unclassified dsDNA viruses	2	0	51368
no rank	Single stranded DNA satellites	1	0	361688
no rank	Satellite Nucleic Acids	1	0	198601
no rank	uncultured Termite group 1 bacterium phylotype Rs-D17	1	1	471821
no rank	dsRNA viruses	1	0	35325
no rank	unclassified Begomovirus-associated DNA beta-like sequences	1	0	361689
no rank	Betasatellites	1	0	190729
no rank	candidate division WWE3	1	0	422282
no rank	Satellites	1	0	12877
no rank	environmental samples	1	0	99260
no rank	Autographa californica nucleopolyhedrovirus	1	1	46015
no rank	SAR116 cluster	1	0	62654
no rank	unclassified Gammaproteobacteria (miscellaneous)	1	0	33811
unclassified	unclassified	3408665	3408665	0
