LEVEL	TAXA	ROLLUP	ASSIGNED	TAXID
	Actinobacteridae	36092	27	85003
	Coriobacterineae	488	0	255727
	Methanobacterium sp. AL-21	4	4	868132
	Actinomycineae	4	0	85005
	Clostridiales genomosp. BVAB3	2	0	699245
	butyrate-producing bacterium SSC/2	2	2	245018
	Mobiluncus/Falcivibrio group	1	0	279916
root	root	857502	79597	1
superkingdom	Bacteria	651599	16380	2
superkingdom	Viruses	125260	0	10239
superkingdom	Archaea	706	0	2157
superphylum	Bacteroidetes/Chlorobi group	13608	5	68336
superphylum	Chlamydiae/Verrucomicrobia group	36	1	51290
superphylum	Fibrobacteres/Acidobacteria group	1	0	131550
phylum	Proteobacteria	536709	10885	1224
phylum	Actinobacteria	36743	0	201174
phylum	Firmicutes	25297	729	1239
phylum	Bacteroidetes	13560	1448	976
phylum	Tenericutes	12337	0	544448
phylum	Fusobacteria	8551	0	32066
phylum	Spirochaetes	1299	0	203691
phylum	Euryarchaeota	615	310	28890
phylum	Candidatus Saccharibacteria	178	60	95818
phylum	Cyanobacteria	165	62	1117
phylum	Thermodesulfobacteria	93	0	200940
phylum	Crenarchaeota	91	0	28889
phylum	Chloroflexi	76	0	200795
phylum	Ignavibacteriae	41	0	1134404
phylum	Chlamydiae	32	0	204428
phylum	Deinococcus-Thermus	31	0	1297
phylum	Elusimicrobia	20	0	74152
phylum	Synergistetes	20	0	508458
phylum	Thermotogae	14	0	200918
phylum	Deferribacteres	11	0	200930
phylum	Planctomycetes	10	0	203682
phylum	Dictyoglomi	6	0	68297
phylum	Chrysiogenetes	6	0	200938
phylum	Aquificae	4	0	200783
phylum	Verrucomicrobia	3	1	74201
phylum	Armatimonadetes	2	0	67819
phylum	Chlorobi	2	0	1090
phylum	Fibrobacteres	1	0	65842
phylum	Caldiserica	1	0	67814
subphylum	delta/epsilon subdivisions	242	0	68525
class	Betaproteobacteria	274479	3125	28216
class	Gammaproteobacteria	250627	16193	1236
class	Actinobacteria	36743	163	1760
class	Bacilli	21239	907	91061
class	Mollicutes	12337	1	31969
class	Bacteroidia	10700	0	200643
class	Fusobacteriia	8551	0	203490
class	Clostridia	1698	175	186801
class	Negativicutes	1597	0	909932
class	Spirochaetia	1299	0	203692
class	Flavobacteriia	1241	0	117743
class	Coriobacteridae	488	0	84998
class	Alphaproteobacteria	476	14	28211
class	Halobacteria	274	0	183963
class	Cytophagia	162	0	768503
class	Deltaproteobacteria	129	3	28221
class	Epsilonproteobacteria	113	3	29547
class	Thermodesulfobacteria	93	0	67799
class	Thermoprotei	91	0	183924
class	Dehalococcoidia	60	0	301297
class	Ignavibacteria	41	0	795747
class	Erysipelotrichia	34	0	526524
class	Chlamydiia	32	0	204429
class	Deinococci	31	0	188787
class	Synergistia	20	0	649775
class	Thermotogae	14	0	188708
class	Chloroflexi	14	0	32061
class	Methanobacteria	12	0	183925
class	Deferribacteres	11	0	68337
class	Methanococci	10	0	183939
class	Methanomicrobia	9	0	224756
class	Planctomycetia	9	0	203683
class	Sphingobacteriia	7	0	117747
class	Chrysiogenetes	6	0	118001
class	Dictyoglomia	6	0	203486
class	Elusimicrobia	4	0	641853
class	Aquificae	4	0	187857
class	Opitutae	2	0	414999
class	Chlorobia	2	0	191410
class	Chthonomonadetes	2	0	1077257
class	Thermomicrobia	2	0	189775
class	Caldisericia	1	0	693071
class	Phycisphaerae	1	0	666505
class	Fibrobacteria	1	0	204430
subclass	Oscillatoriophycideae	94	4	1301283
subclass	Sphaerobacteridae	2	0	85000
order	Burkholderiales	256069	272	80840
order	Pseudomonadales	159824	74	72274
order	Pasteurellales	55697	0	135625
order	Actinomycetales	36029	4173	2037
order	Corynebacterineae	26382	1504	85007
order	Nidovirales	23407	0	76804
order	Enterobacteriales	15376	0	91347
order	Neisseriales	14944	0	206351
order	Mononegavirales	14839	0	11157
order	Lactobacillales	13145	941	186826
order	Mycoplasmatales	12326	0	2085
order	Bacteroidales	10700	782	171549
order	Fusobacteriales	8551	75	203491
order	Bacillales	7187	307	1385
order	Micrococcineae	4975	73	85006
order	Xanthomonadales	2135	0	135614
order	Selenomonadales	1597	19	909929
order	Spirochaetales	1299	0	136
order	Clostridiales	1262	275	186802
order	Flavobacteriales	1241	121	200644
order	Oceanospirillales	863	11	135619
order	Coriobacteriales	488	0	84999
order	Propionibacterineae	325	0	85009
order	Methylophilales	303	0	206350
order	Caudovirales	284	0	28883
order	Halobacteriales	274	0	2235
order	Rhizobiales	263	0	356
order	Thermoanaerobacterales	257	1	68295
order	Cytophagales	162	2	768507
order	Vibrionales	158	0	135623
order	Herpesvirales	155	0	548681
order	Alteromonadales	144	10	135622
order	Rickettsiales	116	0	766
order	Campylobacterales	107	0	213849
order	Thermodesulfobacteriales	93	0	188710
order	Picornavirales	88	0	464095
order	Thiotrichales	83	0	72273
order	Sulfolobales	78	0	2281
order	Streptomycineae	64	0	85011
order	Frankineae	61	0	85013
order	Dehalococcoidales	60	0	1202465
order	Magnetococcales	49	0	1191478
order	Oscillatoriales	46	0	1150
order	Chroococcales	44	24	1118
order	Desulfobacterales	44	0	213118
order	Aeromonadales	41	0	135624
order	Ignavibacteriales	41	41	795748
order	Myxococcales	39	0	29
order	Bifidobacteriales	36	0	85004
order	Chromatiales	36	1	135613
order	Erysipelotrichales	34	0	526525
order	Chlamydiales	32	0	51291
order	Desulfuromonadales	28	14	69541
order	Deinococcales	26	0	118964
order	Synergistales	20	0	649776
order	Legionellales	18	0	118969
order	Micromonosporineae	17	0	85008
order	Streptosporangineae	16	1	85012
order	Thermotogales	14	0	2419
order	Chloroflexales	14	0	32064
order	Desulfovibrionales	13	0	213115
order	Desulfurococcales	13	0	114380
order	Methanobacteriales	12	0	2158
order	Deferribacterales	11	0	191393
order	Acidithiobacillales	11	0	225057
order	Rhodocyclales	10	0	206389
order	Methanococcales	10	0	2182
order	Rhodobacterales	10	0	204455
order	Methylococcales	9	0	135618
order	Planctomycetales	9	0	112
order	Rhodospirillales	7	0	204441
order	Sphingomonadales	7	2	204457
order	Hydrogenophilales	7	0	119069
order	Methanosarcinales	7	0	94695
order	Sphingobacteriales	7	0	200666
order	Nostocales	7	0	1161
order	Acholeplasmatales	7	0	186329
order	Dictyoglomales	6	0	203487
order	Chrysiogenales	6	0	189769
order	Kineosporiineae	6	0	622452
order	Caulobacterales	5	0	204458
order	Thermales	5	0	68933
order	Aquificales	4	0	32069
order	Elusimicrobiales	4	0	641854
order	Glycomycineae	4	0	85014
order	Nautiliales	3	0	235899
order	Entomoplasmatales	3	0	186328
order	Parvularculales	3	0	255473
order	Methanomicrobiales	2	0	2191
order	Pseudonocardineae	2	0	85010
order	Chlorobiales	2	0	191411
order	Natranaerobiales	2	0	485256
order	Pleurocapsales	2	0	52604
order	Halanaerobiales	2	0	53433
order	Chthonomonadales	2	0	1077263
order	Opitutales	2	0	415000
order	Sphaerobacterales	2	0	85001
order	Cardiobacteriales	1	0	135615
order	Phycisphaerales	1	0	666506
order	Caldisericales	1	0	693072
order	Nitrosomonadales	1	0	32003
order	SAR11 cluster	1	0	54526
order	Fibrobacterales	1	0	218872
order	Bacteroidetes Order II. Incertae sedis	1	0	1100069
order	Syntrophobacterales	1	0	213462
suborder	Sorangiineae	23	0	80812
suborder	Nannocystineae	15	0	224462
suborder	Sphaerobacterineae	2	0	255728
suborder	Cystobacterineae	1	0	80811
family	Alcaligenaceae	254967	255	506
family	Moraxellaceae	156184	13191	468
family	Microviridae	81531	0	10841
family	Pasteurellaceae	55697	14569	712
family	Corynebacteriaceae	24179	0	1653
family	Coronaviridae	23407	0	11118
family	Enterobacteriaceae	15376	10713	543
family	Neisseriaceae	14944	862	481
family	Paramyxoviridae	14834	0	11158
family	Mycoplasmataceae	12326	0	2092
family	Streptococcaceae	9611	183	1300
family	Fusobacteriaceae	7547	30	203492
family	Prevotellaceae	5807	0	171552
family	Staphylococcaceae	5800	358	90964
family	Micrococcaceae	4897	239	1268
family	Porphyromonadaceae	3723	319	171551
family	Pseudomonadaceae	3566	154	135621
family	Xanthomonadaceae	2135	677	32033
family	Lactobacillaceae	2051	38	33958
family	Veillonellaceae	1577	36	31977
family	Spirochaetaceae	1218	1	137
family	Polydnaviridae	1123	558	10482
family	Flavobacteriaceae	1071	123	49546
family	Virgaviridae	989	0	675071
family	Leptotrichiaceae	929	140	1129771
family	Bacillaceae	905	103	186817
family	Hahellaceae	803	0	224379
family	Poxviridae	704	0	10240
family	Mycobacteriaceae	673	0	1762
family	Inoviridae	650	0	10860
family	Potyviridae	577	0	39729
family	Baculoviridae	569	0	10442
family	Clostridiales Family XI. Incertae Sedis	494	1	543310
family	Coriobacteriaceae	488	15	84107
family	Enterococcaceae	409	1	81852
family	Methylophilaceae	303	12	32011
family	Halobacteriaceae	274	0	2236
family	Orthomyxoviridae	224	0	11308
family	Thermoanaerobacteraceae	218	0	186814
family	Propionibacteriaceae	217	2	31957
family	Bacteroidaceae	200	0	815
family	Lachnospiraceae	190	1	186803
family	Myoviridae	167	0	10662
family	Burkholderiaceae	164	8	119060
family	Vibrionaceae	158	6	641
family	Comamonadaceae	157	112	80864
family	Cytophagaceae	143	0	89373
family	Herpesviridae	128	0	10292
family	Oxalobacteraceae	127	52	75682
family	Hyphomicrobiaceae	120	0	45401
family	Podoviridae	115	0	10744
family	Phycodnaviridae	114	0	10501
family	Nocardioidaceae	108	0	85015
family	Thermodesulfobacteriaceae	93	0	188711
family	Helicobacteraceae	88	0	72293
family	Secoviridae	85	0	675072
family	Eubacteriaceae	81	0	186806
family	Piscirickettsiaceae	79	12	135616
family	Carnobacteriaceae	79	0	186828
family	Clostridiaceae	78	0	31979
family	Sulfolobaceae	78	0	118883
family	Leptospiraceae	77	0	170
family	Alteromonadaceae	75	2	72275
family	Ruminococcaceae	72	0	541000
family	Streptomycetaceae	64	0	2062
family	Rikenellaceae	63	0	171550
family	Dehalococcoidaceae	60	0	1202464
family	Anaplasmataceae	60	1	942
family	Rhizobiaceae	58	0	82115
family	Rickettsiaceae	56	0	775
family	Peptococcaceae	55	21	186807
family	Leuconostocaceae	53	2	81850
family	Listeriaceae	51	0	186820
family	Acidothermaceae	50	0	85032
family	Magnetococcaceae	49	0	1191479
family	Blattabacteriaceae	42	0	39782
family	Aeromonadaceae	41	2	84642
family	Bartonellaceae	40	0	772
family	Desulfobacteraceae	40	0	213119
family	Shewanellaceae	38	0	267890
family	Thermoanaerobacterales Family III. Incertae Sedis	36	0	543371
family	Bifidobacteriaceae	36	0	31953
family	Erysipelotrichaceae	34	0	128827
family	Parachlamydiaceae	30	0	92713
family	Ectothiorhodospiraceae	28	1	72276
family	Alloherpesviridae	27	0	548682
family	Trueperaceae	26	0	332247
family	Polyangiaceae	23	0	49
family	Nocardiaceae	23	0	85025
family	Paenibacillaceae	22	0	186822
family	Beijerinckiaceae	22	0	45404
family	Alcanivoracaceae	22	0	224372
family	Synergistaceae	20	0	649777
family	Campylobacteraceae	19	0	72294
family	Halomonadaceae	18	0	28256
family	Micromonosporaceae	17	0	28056
family	Flammeovirgaceae	16	0	200667
family	Coxiellaceae	16	0	118968
family	Kofleriaceae	15	0	224464
family	Psychromonadaceae	15	0	267894
family	Bradyrhizobiaceae	14	0	41294
family	Thermotogaceae	14	10	188709
family	Nocardiopsaceae	14	13	83676
family	Chloroflexaceae	14	0	1106
family	Pyrodictiaceae	13	0	2307
family	Desulfovibrionaceae	12	0	194924
family	Methanobacteriaceae	12	0	2159
family	Deferribacteraceae	11	8	191394
family	Acidithiobacillaceae	11	0	225058
family	Methanococcaceae	10	0	2183
family	Peptostreptococcaceae	10	0	186804
family	Rhodobacteraceae	10	4	31989
family	Rhodocyclaceae	10	1	75787
family	Nakamurellaceae	10	0	85031
family	Geobacteraceae	9	0	213422
family	Planctomycetaceae	9	1	126
family	Oceanospirillaceae	9	0	135620
family	Methylococcaceae	9	0	403
family	Acholeplasmataceae	7	3	2146
family	Hydrogenophilaceae	7	0	206349
family	Kineosporiaceae	6	0	83778
family	Dictyoglomaceae	6	0	203488
family	Chromatiaceae	6	0	1046
family	Chrysiogenaceae	6	0	189770
family	Rhodospirillaceae	6	0	41295
family	Sphingobacteriaceae	6	0	84566
family	Thermaceae	5	0	188786
family	Methanosarcinaceae	5	0	2206
family	Pelobacteraceae	5	0	213423
family	Caulobacteraceae	5	2	76892
family	Sphingomonadaceae	5	0	41297
family	Rivulariaceae	5	0	1185
family	Glycomycetaceae	4	0	85034
family	Brachyspiraceae	4	0	143786
family	Actinomycetaceae	4	0	2049
family	Francisellaceae	4	0	34064
family	Desulfobulbaceae	4	0	213121
family	Elusimicrobiaceae	4	0	641876
family	Iridoviridae	4	0	10486
family	Alicyclobacillaceae	4	0	186823
family	Spiroplasmataceae	3	0	2131
family	Parvularculaceae	3	0	255474
family	Picornaviridae	3	0	12058
family	Methylobacteriaceae	3	0	119045
family	Segniliparaceae	3	0	316606
family	Nautiliaceae	3	0	224467
family	Opitutaceae	2	0	134623
family	Pseudoalteromonadaceae	2	0	267888
family	Chlorobiaceae	2	2	191412
family	Legionellaceae	2	0	444
family	Planococcaceae	2	0	186818
family	Hydrogenothermaceae	2	0	224027
family	Syntrophomonadaceae	2	2	68298
family	Natranaerobiaceae	2	0	485255
family	Pseudonocardiaceae	2	0	2070
family	Methanosaetaceae	2	0	143067
family	Siphoviridae	2	0	10699
family	Chthonomonadaceae	2	0	1077264
family	Nostocaceae	2	0	1162
family	Rhodobiaceae	2	0	119043
family	Thermoanaerobacterales Family IV. Incertae Sedis	2	0	543372
family	Ferrimonadaceae	2	0	267892
family	Chlamydiaceae	2	0	809
family	Halobacteroidaceae	2	0	53434
family	Sphaerobacteraceae	2	0	85002
family	Methanoregulaceae	2	0	1198451
family	Rhodothermaceae	1	0	563843
family	Anelloviridae	1	0	687329
family	Fibrobacteraceae	1	0	204431
family	Beutenbergiaceae	1	0	125316
family	Myxococcaceae	1	0	31
family	Desulfurobacteriaceae	1	1	558314
family	Xanthobacteraceae	1	0	335928
family	Cardiobacteriaceae	1	0	868
family	Halothiobacillaceae	1	0	255526
family	Streptosporangiaceae	1	0	2004
family	Jonesiaceae	1	0	85022
family	Chitinophagaceae	1	0	563835
family	Intrasporangiaceae	1	0	85021
family	Colwelliaceae	1	0	267889
family	Aerococcaceae	1	0	186827
family	Methylocystaceae	1	0	31993
family	Acidaminococcaceae	1	0	909930
family	Acetobacteraceae	1	0	433
family	Nitrosomonadaceae	1	0	206379
family	Syntrophaceae	1	0	213468
family	Phycisphaeraceae	1	0	666507
family	Geodermatophilaceae	1	0	85030
family	Desulfohalobiaceae	1	0	213117
family	Aquificaceae	1	0	64898
family	Cyclobacteriaceae	1	0	563798
family	Brucellaceae	1	0	118882
family	Caldisericaceae	1	0	693073
family	Clostridiales Family XVII. Incertae Sedis	1	0	539000
subfamily	Coronavirinae	23407	0	693995
subfamily	Paramyxovirinae	12144	0	11159
subfamily	Pneumovirinae	2690	0	11244
subfamily	Chordopoxvirinae	704	0	10241
subfamily	Autographivirinae	115	0	542835
subfamily	Comovirinae	85	0	675075
subfamily	Alphaherpesvirinae	67	0	10293
subfamily	Betaherpesvirinae	59	0	10357
subfamily	Gammaherpesvirinae	2	0	10374
subfamily	Spounavirinae	2	0	857473
subfamily	Azotobacter group	1	0	351
tribe	Rickettsieae	56	0	33988
tribe	Wolbachieae	2	0	952
genus	Achromobacter	254575	0	222
genus	Moraxella	125359	0	475
genus	Microvirus	81531	86	10842
genus	Haemophilus	39074	1323	724
genus	Corynebacterium	24179	10234	1716
genus	Alphacoronavirus	23407	0	693996
genus	Acinetobacter	17268	11500	469
genus	Neisseria	14002	6059	482
genus	Mycoplasma	12325	2159	2093
genus	Respirovirus	12103	39	186938
genus	Streptococcus	9425	7373	1301
genus	Fusobacterium	7517	0	848
genus	Prevotella	5807	1485	838
genus	Staphylococcus	5439	2317	1279
genus	Rothia	4646	451	32207
genus	Pseudomonas	3400	1670	286
genus	Pneumovirus	2634	2	11245
genus	Porphyromonas	2321	371	836
genus	Serratia	2119	2	613
genus	Lactobacillus	2012	702	1578
genus	Veillonella	1516	0	29465
genus	Stenotrophomonas	1430	0	40323
genus	Treponema	1200	112	157
genus	Actinobacillus	1108	72	713
genus	Tobamovirus	989	0	12234
genus	Escherichia	961	2	561
genus	Capnocytophaga	930	29	1016
genus	Tannerella	900	0	195950
genus	Hahella	803	0	158481
genus	Bacillus	784	1	1386
genus	Aggregatibacter	770	27	416916
genus	Orthopoxvirus	702	433	10242
genus	Mycobacterium	669	22	1763
genus	Inovirus	650	0	10861
genus	Potyvirus	577	42	12195
genus	Ichnovirus	555	0	10483
genus	Atopobium	457	0	1380
genus	Alphabaculovirus	436	1	558016
genus	Streptobacillus	417	0	34104
genus	Enterococcus	407	285	1350
genus	Psychrobacter	366	329	497
genus	Anaerococcus	360	0	165779
genus	Morganella	359	0	581
genus	Methylibium	312	0	316612
genus	Methylovorus	279	279	81682
genus	Influenzavirus A	221	0	197911
genus	Propionibacterium	215	129	1743
genus	Klebsiella	210	4	570
genus	Bacteroides	200	4	816
genus	Leptotrichia	191	0	32067
genus	Enterobacter	185	1	547
genus	Sebaldella	181	0	32068
genus	Parabacteroides	178	0	375288
genus	Pantoea	171	158	53335
genus	Phikzlikevirus	165	0	680115
genus	Thermoanaerobacter	159	0	1754
genus	Burkholderia	149	5	32008
genus	Vibrio	144	107	662
genus	Fibrella	142	0	861914
genus	Finegoldia	133	0	150022
genus	Salinarchaeum	131	0	1269201
genus	Betabaculovirus	131	0	558017
genus	Taylorella	130	0	29574
genus	Candidatus Azobacteroides	125	0	511434
genus	Hyphomicrobium	117	34	81
genus	T7likevirus	115	0	110456
genus	Candidatus Saccharimonas	113	0	1331051
genus	Buchnera	103	0	32199
genus	Phaeovirus	102	0	181085
genus	Kribbella	101	0	182639
genus	Exiguobacterium	96	5	33986
genus	Cellulosilyticum	93	0	698776
genus	Butyrivibrio	93	0	830
genus	Thermodesulfobacterium	91	0	1740
genus	Natronococcus	91	0	29287
genus	Proteus	90	0	583
genus	Comovirus	85	0	12258
genus	Helicobacter	85	1	209
genus	Eubacterium	81	0	1730
genus	Carnobacterium	79	0	2747
genus	Clostridium	77	67	1485
genus	Sulfolobus	77	0	2284
genus	Leptospira	77	0	171
genus	Pseudogulbenkiania	76	0	568394
genus	Yersinia	75	2	629
genus	Histophilus	74	0	214906
genus	Ruminococcus	72	22	1263
genus	Simplexvirus	65	0	10294
genus	Streptomyces	64	0	1883
genus	Alistipes	63	8	239759
genus	Marinobacter	60	56	2742
genus	Dehalococcoides	60	0	61434
genus	Caldanaerobacter	58	0	249529
genus	Muromegalovirus	58	0	10365
genus	Neorickettsia	57	57	33993
genus	Metapneumovirus	56	0	162387
genus	Janthinobacterium	56	0	29580
genus	Shigella	54	0	620
genus	Erwinia	51	42	551
genus	Listeria	51	8	1637
genus	Acidothermus	50	0	28048
genus	Candidatus Liberibacter	50	2	34019
genus	Weissella	49	0	46255
genus	Magnetococcus	49	0	162171
genus	Halovivax	46	0	332951
genus	Blattabacterium	42	1	34098
genus	Salmonella	42	0	590
genus	Rubulavirus	41	0	39744
genus	Desulfococcus	40	0	896
genus	Bartonella	40	1	773
genus	Shewanella	38	34	22
genus	Aeromonas	38	0	642
genus	Rickettsia	38	0	780
genus	Oscillatoria	36	0	1158
genus	Bifidobacterium	36	1	1678
genus	Methylophaga	35	32	40222
genus	Erysipelothrix	34	0	1647
genus	Parachlamydia	30	0	83551
genus	Thiomicrospira	28	0	933
genus	Truepera	26	0	332248
genus	Photorhabdus	25	16	29487
genus	Selenomonas	24	0	970
genus	Spiribacter	24	0	1335745
genus	Sorangium	23	0	39643
genus	Verminephrobacter	23	0	364316
genus	Bibersteinia	23	0	476528
genus	Pasteurella	22	0	745
genus	Caldicellulosiruptor	22	2	44000
genus	Ictalurivirus	22	0	172653
genus	Nocardia	22	0	1817
genus	Basfia	22	0	697331
genus	Paenibacillus	21	0	44249
genus	Beijerinckia	21	0	532
genus	Desulfitobacterium	21	0	36853
genus	Candidatus Carsonella	20	0	114185
genus	Candidatus Riesia	20	0	401618
genus	Wigglesworthia	20	0	51228
genus	Mannheimia	20	0	75984
genus	Shimwellia	19	0	1335483
genus	Orientia	18	0	69474
genus	Aminobacterium	18	0	81466
genus	Rubrivivax	17	0	28067
genus	Alcanivorax	17	15	59753
genus	Campylobacter	17	1	194
genus	Geobacillus	16	4	129337
genus	Coxiella	16	0	776
genus	Salinispora	16	16	168694
genus	Marivirga	16	0	869806
genus	Gallibacterium	15	0	155493
genus	Haliangium	15	0	162027
genus	Psychromonas	15	1	67572
genus	Chloroflexus	14	14	1107
genus	Rhodopseudomonas	14	0	1073
genus	Olsenella	14	0	133925
genus	Herminiimonas	13	0	303379
genus	Pyrolobus	13	0	54251
genus	Thermosediminibacter	13	0	291988
genus	Candidatus Portiera	13	0	235572
genus	Borrelia	12	0	138
genus	Desulfotomaculum	12	1	1562
genus	Methylotenera	12	0	359407
genus	Rahnella	11	1	34037
genus	Pectobacterium	11	0	122277
genus	Comamonas	11	0	283
genus	Citrobacter	11	0	544
genus	Cellvibrio	11	0	10
genus	Acidithiobacillus	11	1	119977
genus	Micrococcus	10	0	1269
genus	Bracovirus	10	0	10485
genus	Glaciecola	10	0	89404
genus	Methanococcus	10	0	2184
genus	Xanthomonas	10	0	338
genus	Pseudoxanthomonas	10	0	83618
genus	Nakamurella	10	0	53460
genus	Kinetoplastibacterium	10	8	33055
genus	Cellulophaga	10	0	104264
genus	Thauera	9	0	33057
genus	Lawsonia	9	0	41707
genus	Geobacter	9	2	28231
genus	Methanobrevibacter	8	0	2172
genus	Coccolithovirus	8	0	346673
genus	Candidatus Atelocyanobacterium	8	0	1453359
genus	Marinomonas	8	0	28253
genus	Pirellula	7	0	123
genus	Ralstonia	7	0	48736
genus	Xenorhabdus	7	0	626
genus	Candidatus Blochmannia	7	3	203804
genus	Dickeya	7	0	204037
genus	Edwardsiella	7	0	635
genus	Photobacterium	7	0	657
genus	Nocardioides	7	0	1839
genus	Candidatus Moranella	7	0	1048757
genus	Kineococcus	6	0	33981
genus	Desulfurispirillum	6	0	393029
genus	Cyanobium	6	0	167375
genus	Thiobacillus	6	0	919
genus	Geitlerinema	6	0	63132
genus	Dictyoglomus	6	6	13
genus	Kangiella	5	0	261963
genus	Candidatus Sulcia	5	0	336809
genus	Candidatus Profftella	5	0	1381133
genus	Solitalea	5	0	929509
genus	Halomonas	5	0	2745
genus	Pelobacter	5	0	18
genus	Natrialba	5	0	63742
genus	Xylella	5	0	2370
genus	Cyprinivirus	5	0	692606
genus	Candidatus Zinderia	4	0	884214
genus	Francisella	4	3	262
genus	Elusimicrobium	4	0	423604
genus	Calothrix	4	0	1186
genus	Pusillimonas	4	0	305976
genus	Methylomicrobium	4	0	39773
genus	Stackebrandtia	4	0	283810
genus	Cronobacter	4	0	413496
genus	Amycolicicoccus	4	0	992401
genus	Chlorovirus	4	4	181083
genus	Ranavirus	4	0	10492
genus	Methanobacterium	4	0	2160
genus	Sinorhizobium	4	0	28105
genus	Meiothermus	4	0	65551
genus	Polaromonas	4	3	52972
genus	Methylococcus	4	0	413
genus	Spirochaeta	4	0	146
genus	Desulfobulbus	4	0	893
genus	Brachyspira	4	3	29521
genus	Alicyclobacillus	4	0	29330
genus	Candidatus Tremblaya	4	0	189384
genus	Segniliparus	3	0	286801
genus	Thiocystis	3	0	13724
genus	Influenzavirus B	3	0	197912
genus	Ramlibacter	3	0	174951
genus	Parvularcula	3	0	208215
genus	Bordetella	3	1	517
genus	Enterovirus	3	0	12059
genus	Paludibacter	3	0	346096
genus	Macrococcus	3	0	69965
genus	Lactococcus	3	2	1357
genus	Arcanobacterium	3	0	28263
genus	Candidatus Hamiltonella	3	0	568987
genus	Ketogulonicigenium	3	0	92944
genus	Alteromonas	3	0	226
genus	Providencia	3	0	586
genus	Candidatus Phytoplasma	3	1	33926
genus	Zymomonas	3	0	541
genus	Rhodospirillum	3	1	1081
genus	Spiroplasma	3	1	2132
genus	Nautilia	3	0	191291
genus	Methylobacterium	3	0	407
genus	Laribacter	3	0	168470
genus	Microcystis	3	0	1125
genus	Rhodanobacter	3	0	75309
genus	Methanosarcina	3	0	2207
genus	Desulfovibrio	3	1	872
genus	Wolinella	2	0	843
genus	Molluscipoxvirus	2	0	10278
genus	Sphaerobacter	2	0	2056
genus	Simiduia	2	0	447467
genus	Opitutus	2	0	178440
genus	Deferribacter	2	0	53572
genus	Methanoregula	2	0	395331
genus	Varicellovirus	2	0	10319
genus	Parvibaculum	2	0	256616
genus	Chthonomonas	2	0	1077265
genus	Sodalis	2	0	84565
genus	Ferrimonas	2	0	44011
genus	Deltabaculovirus	2	0	558019
genus	Acidovorax	2	2	12916
genus	Crinalium	2	0	241421
genus	Leisingera	2	0	191028
genus	Thermodesulfatator	2	0	241192
genus	Odoribacter	2	0	283168
genus	Mahella	2	0	252965
genus	Anaerobaculum	2	0	46613
genus	Pseudoalteromonas	2	1	53246
genus	Oenococcus	2	0	46254
genus	Legionella	2	0	445
genus	Marinitoga	2	0	160798
genus	Filifactor	2	0	44259
genus	Solibacillus	2	0	648800
genus	Chamaesiphon	2	0	217161
genus	Delftia	2	0	80865
genus	Pleurocapsa	2	0	44474
genus	Methanosalsum	2	0	196136
genus	Natranaerobius	2	0	375928
genus	Coprococcus	2	0	33042
genus	Methanosaeta	2	0	2222
genus	Thioalkalivibrio	2	0	106633
genus	Spounalikevirus	2	0	140409
genus	Tropheryma	2	0	2038
genus	Rhodomicrobium	2	0	1068
genus	Flavobacterium	2	1	237
genus	Halobacillus	2	0	45667
genus	Chlamydia	2	0	810
genus	Sphingomonas	2	2	13687
genus	Thioalkalimicrobium	2	0	92244
genus	Nitrosococcus	2	2	1227
genus	Weeksella	2	0	1013
genus	Acetohalobium	2	0	28186
genus	Rhizobium	2	0	379
genus	Cycloclasticus	2	2	34067
genus	Wolbachia	2	0	953
genus	Candidatus Amoebophilus	1	0	281119
genus	Pelagibacterium	1	0	1082930
genus	Sulfuricella	1	0	935200
genus	Gammatorquevirus	1	0	687333
genus	Methylomonas	1	0	416
genus	Brevundimonas	1	0	41275
genus	Haloquadratum	1	0	293431
genus	Rhadinovirus	1	0	10379
genus	Lambdalikevirus	1	0	186765
genus	Pedobacter	1	0	84567
genus	Teredinibacter	1	0	2425
genus	Candidatus Pelagibacter	1	0	198251
genus	Jonesia	1	0	43673
genus	Chromobacterium	1	0	535
genus	Salinibacter	1	0	146918
genus	Kosmotoga	1	0	651456
genus	Alkalilimnicola	1	0	133193
genus	Nostoc	1	0	1177
genus	Thermobaculum	1	0	262406
genus	Allochromatium	1	0	85072
genus	Aerococcus	1	0	1375
genus	Caulobacter	1	0	75
genus	Amycolatopsis	1	1	1813
genus	Anabaena	1	0	1163
genus	Thermoanaerobacterium	1	1	28895
genus	Acetobacter	1	0	434
genus	Methylocystis	1	0	133
genus	Arthrobacter	1	0	1663
genus	Azospirillum	1	0	191
genus	Saccharomonospora	1	0	1851
genus	Anaeromyxobacter	1	1	161492
genus	Tistrella	1	0	171436
genus	Persephonella	1	0	182899
genus	Actinoplanes	1	0	1865
genus	Roseburia	1	1	841
genus	Herbaspirillum	1	0	963
genus	Nitrosomonas	1	1	914
genus	Acidaminococcus	1	1	904
genus	Nocardiopsis	1	1	2013
genus	Magnetospirillum	1	0	13134
genus	Oceanithermus	1	0	208447
genus	Metallosphaera	1	0	41980
genus	Sulfuricurvum	1	1	286130
genus	Leptolyngbya	1	0	47251
genus	Candidatus Accumulibacter	1	0	327159
genus	Mobiluncus	1	0	2050
genus	Phenylobacterium	1	0	20
genus	Planctomyces	1	0	118
genus	Dichelobacter	1	0	869
genus	Sulfobacillus	1	0	28033
genus	Coriobacterium	1	0	33870
genus	Thiomonas	1	1	32012
genus	Rivularia	1	0	373984
genus	Pediococcus	1	0	1253
genus	Brucella	1	1	234
genus	Roseolovirus	1	0	40272
genus	Tetragenococcus	1	0	51668
genus	Sulfurihydrogenibium	1	0	212790
genus	Starkeya	1	0	152053
genus	Sulfurospirillum	1	1	57665
genus	Chitinophaga	1	0	79328
genus	Candidatus Arthromitus	1	0	49082
genus	Cyclobacterium	1	0	68288
genus	Tolumonas	1	0	43947
genus	Trichodesmium	1	0	1205
genus	Intrasporangium	1	0	53357
genus	Lymphocryptovirus	1	0	10375
genus	Ureaplasma	1	0	2129
genus	Syntrophus	1	0	43773
genus	Brevibacillus	1	0	55080
genus	Streptosporangium	1	0	2000
genus	Collimonas	1	0	202907
genus	Calditerrivibrio	1	0	545865
genus	Agrobacterium	1	0	357
genus	Arcobacter	1	0	28196
genus	Synechococcus	1	0	1129
genus	Thalassolituus	1	0	187492
genus	Phycisphaera	1	0	666508
genus	Fibrobacter	1	0	832
genus	Micavibrio	1	0	213485
genus	Caldisericum	1	0	693074
genus	Geodermatophilus	1	0	1860
genus	Gordonibacter	1	0	644652
genus	Acholeplasma	1	0	2147
genus	Dinoroseobacter	1	0	309512
genus	Megasphaera	1	0	906
genus	Beutenbergia	1	0	84756
genus	Candidatus Hodgkinia	1	0	573657
genus	Kocuria	1	0	57493
genus	Rhodococcus	1	0	1827
genus	Runella	1	0	105
genus	Desulfohalobium	1	0	45662
genus	Methylocella	1	0	120652
genus	Thermotoga	1	0	2335
genus	Azotobacter	1	0	352
genus	Halothiobacillus	1	0	109262
genus	Tepidanaerobacter	1	0	499228
genus	Aliivibrio	1	0	511678
genus	Thermincola	1	0	278993
genus	Colwellia	1	0	28228
genus	Aquifex	1	0	2713
genus	Sphaerochaeta	1	0	399320
subgenus	Branhamella	125359	0	46226
species group	Acinetobacter calcoaceticus/baumannii complex	5626	103	909768
species group	Pseudomonas aeruginosa group	1612	306	136841
species group	Bacillus cereus group	732	1	86661
species group	Mycobacterium chelonae group	577	0	670516
species group	Enterobacter cloacae complex	181	0	354276
species group	Streptococcus anginosus group	133	19	671232
species group	pseudomallei group	126	0	111527
species group	Pseudomonas fluorescens group	69	6	136843
species group	spotted fever group	38	0	114277
species group	Pseudomonas stutzeri group	23	0	136846
species group	Burkholderia cepacia complex	18	2	87882
species group	Pseudomonas pertucinogena group	10	0	136844
species group	Bacillus subtilis group	8	0	653685
species group	Streptococcus dysgalactiae group	6	0	119603
species group	Vibrio harveyi group	4	0	717610
species group	Pseudomonas syringae group	4	0	136849
species group	Pseudomonas putida group	2	1	136845
species group	16SrX (Apple proliferation group)	1	0	85630
species group	Mycoplasma mycoides group	1	0	656088
species group	Candidatus Phytoplasma asteris	1	0	85620
species group	Mycobacterium tuberculosis complex	1	0	77643
species subgroup	Mycobacterium abscessus subgroup	577	0	670506
species subgroup	Pseudomonas stutzeri subgroup	23	0	578833
species subgroup	Pseudomonas syringae group genomosp. 2	2	0	251698
species	Achromobacter xylosoxidans	254575	350	85698
species	Moraxella catarrhalis	125359	0	480
species	Enterobacteria phage phiX174 sensu lato	81438	81438	374840
species	Haemophilus influenzae	34064	31558	727
species	Human coronavirus NL63	23407	23407	277944
species	Human parainfluenza virus 3	12007	12007	11216
species	Corynebacterium aurimucosum	11169	0	169292
species	Mycoplasma hyopneumoniae	8214	135	2099
species	Fusobacterium nucleatum	7517	4459	851
species	Acinetobacter baumannii	5512	5478	470
species	Neisseria meningitidis	5053	3705	487
species	Rothia mucilaginosa	3672	0	43675
species	Haemophilus parainfluenzae	3202	0	729
species	Prevotella melaninogenica	3132	0	28132
species	Staphylococcus aureus	3019	2971	1280
species	Respiratory syncytial virus	2632	2632	12814
species	Neisseria gonorrhoeae	2176	21	485
species	Serratia marcescens	2075	2	615
species	Corynebacterium callunae	1751	0	1721
species	Veillonella parvula	1516	0	29466
species	Porphyromonas asaccharolytica	1434	0	28123
species	Stenotrophomonas maltophilia	1430	1162	40324
species	Pseudomonas aeruginosa	1303	1290	287
species	Mycoplasma arthritidis	1082	0	2111
species	Actinobacillus pleuropneumoniae	964	862	715
species	Escherichia coli	958	491	562
species	Tannerella forsythia	900	0	28112
species	Capnocytophaga ochracea	874	0	1018
species	Hahella chejuensis	803	0	158327
species	Streptococcus parasanguinis	754	512	1318
species	Neisseria lactamica	714	0	486
species	Bacillus thuringiensis	700	0	1428
species	Treponema denticola	680	0	158
species	Aggregatibacter aphrophilus	657	0	732
species	Enterobacteria phage M13	650	650	10870
species	Lactobacillus rhamnosus	649	638	47715
species	Cucumber green mottle mosaic virus	620	620	12235
species	Mycobacterium abscessus	577	577	36809
species	Rothia dentocariosa	523	0	2047
species	Porphyromonas gingivalis	516	435	837
species	Prevotella sp. oral taxon 299	500	0	652716
species	Watermelon mosaic virus	497	497	146500
species	Haemophilus parasuis	474	436	738
species	Corynebacterium argentoratense	473	0	42817
species	Atopobium parvulum	457	0	1382
species	Mycoplasma hominis	456	0	2098
species	Hyposoter fugitivus ichnovirus	447	447	265522
species	Maruca vitrata nucleopolyhedrovirus	431	431	1307954
species	Corynebacterium resistens	427	0	258224
species	Streptobacillus moniliformis	417	0	34105
species	Prevotella denticola	390	0	28129
species	Streptococcus salivarius	378	310	1304
species	Tomato mosaic virus	369	369	12253
species	Anaerococcus prevotii	360	0	33034
species	Morganella morganii	359	0	582
species	Lactobacillus gasseri	317	0	1596
species	Methylibium petroleiphilum	312	0	105560
species	Streptococcus agalactiae	271	256	1311
species	Treponema brennaborense	263	0	81028
species	Lactobacillus fermentum	237	237	1613
species	Influenza A virus	221	3	11320
species	Mycoplasma hyorhinis	211	119	2100
species	Klebsiella pneumoniae	204	156	573
species	Vaccinia virus	204	204	10245
species	Leptotrichia buccalis	191	0	40542
species	Sebaldella termitidis	181	0	826
species	Parabacteroides distasonis	178	0	823
species	Pseudomonas phage phiKZ	165	165	169683
species	Thermoanaerobacter wiegelii	159	0	46354
species	Enterobacter cloacae	156	114	550
species	Bacteroides vulgatus	153	0	821
species	Prevotella ruminicola	148	0	839
species	Fibrella aestuarina	142	0	651143
species	Acinetobacter sp. ADP1	142	142	62977
species	Streptococcus suis	142	0	1307
species	Finegoldia magna	133	0	1260
species	Choristoneura occidentalis granulovirus	131	131	364745
species	Salinarchaeum sp. Harcht-Bsk1	131	131	1333523
species	Taylorella equigenitalis	129	91	29575
species	Burkholderia mallei	126	111	13373
species	Candidatus Azobacteroides pseudotrichonymphae	125	0	511435
species	Enterococcus faecalis	121	49	1351
species	Prevotella intermedia	116	0	28131
species	Yersinia phage phiA1122	115	115	227720
species	Candidatus Saccharimonas aalborgensis	113	113	1332188
species	Buchnera aphidicola	103	2	9
species	Ectocarpus siliculosus virus 1	102	102	37665
species	Kribbella flavida	101	0	182640
species	Treponema pedis	101	0	409322
species	Staphylococcus epidermidis	96	96	1282
species	Cellulosilyticum lentocellum	93	0	29360
species	Butyrivibrio proteoclasticus	93	0	43305
species	Glypta fumiferanae ichnovirus	92	92	419435
species	Natronococcus occultus	91	0	29288
species	Thermodesulfobacterium geofontis	91	0	1295609
species	Exiguobacterium sp. AT1b	91	91	360911
species	Proteus mirabilis	90	77	584
species	Aggregatibacter actinomycetemcomitans	86	78	714
species	Squash mosaic virus	85	85	12263
species	Streptococcus sanguinis	84	0	1305
species	Streptococcus pneumoniae	79	73	1313
species	Carnobacterium maltaromaticum	79	0	2751
species	Sulfolobus islandicus	77	0	43080
species	Leptospira biflexa	77	0	172
species	Pseudogulbenkiania sp. NH8B	76	76	748280
species	Streptococcus anginosus	76	55	1328
species	Histophilus somni	74	20	731
species	Streptococcus sp. I-P16	73	73	1156433
species	Enterobacteriaceae bacterium strain FGI 57	72	72	693444
species	Propionibacterium avidum	71	0	33010
species	Mycoplasma pulmonis	71	0	2107
species	Cercopithecine herpesvirus 2	65	65	10317
species	Streptococcus oligofermentans	65	0	195041
species	Mycobacterium smegmatis	61	0	1772
species	Streptomyces cattleya	61	0	29303
species	Eubacterium rectale	60	57	39491
species	Dehalococcoides mccartyi	60	60	61435
species	Helicobacter bizzozeronii	58	0	56877
species	Caldanaerobacter subterraneus	58	0	911092
species	Murid herpesvirus 2	58	58	28304
species	Mycoplasma suis	58	0	57372
species	Cowpox virus	57	57	10243
species	Corynebacterium halotolerans	57	0	225326
species	Yersinia pestis	57	2	632
species	Bovine parainfluenza virus 3	57	57	11215
species	Lactobacillus sanfranciscensis	56	0	1625
species	Janthinobacterium sp. Marseille	56	56	375286
species	Human metapneumovirus	56	56	162145
species	Hyphomicrobium denitrificans	55	4	53399
species	Alistipes finegoldii	55	0	214856
species	Ruminococcus albus	50	0	1264
species	Acidothermus cellulolyticus	50	0	28049
species	Actinobacillus suis	49	0	716
species	Weissella koreensis	49	0	165096
species	Magnetococcus marinus	49	0	1124597
species	Candidatus Liberibacter americanus	47	0	309868
species	Halovivax ruber	46	0	387341
species	Treponema succinifaciens	44	0	167
species	Listeria monocytogenes	42	42	1639
species	Streptococcus oralis	41	0	1303
species	Human parainfluenza virus 2	41	41	11212
species	Blattabacterium sp. (Blatta orientalis)	41	0	367806
species	Shigella flexneri	41	35	623
species	Desulfococcus oleovorans	40	0	181663
species	Salmonella enterica	40	0	28901
species	Bacillus infantis	39	0	324767
species	Bartonella tribocorum	39	0	85701
species	Aeromonas hydrophila	38	0	644
species	Rickettsia africae	38	0	35788
species	Soybean mosaic virus	38	38	12222
species	Pseudomonas fluorescens	37	1	294
species	Streptococcus constellatus	36	0	76860
species	Prevotella dentalis	36	0	52227
species	Oscillatoria acuminata	35	0	118323
species	Erysipelothrix rhusiopathiae	34	0	1648
species	Serratia symbiotica	34	0	138074
species	Psychrobacter sp. PRwf-1	31	31	349106
species	Parachlamydia acanthamoebae	30	0	83552
species	Bifidobacterium thermophilum	29	0	33905
species	Bacillus cereus	29	1	1396
species	Thiomicrospira crunogena	28	0	39765
species	Hyphomicrobium sp. MC1	28	28	717785
species	Capnocytophaga canimorsus	27	0	28188
species	Truepera radiovictrix	26	0	332249
species	Bacteroides fragilis	25	25	817
species	Selenomonas ruminantium	24	0	971
species	Pseudomonas poae	24	0	200451
species	Mycoplasma genitalium	24	0	2097
species	Vibrio cholerae	24	0	666
species	Sorangium cellulosum	23	0	56
species	Pseudomonas stutzeri	23	6	316
species	Actinobacillus succinogenes	23	0	67854
species	Verminephrobacter eiseniae	23	0	364317
species	Bibersteinia trehalosi	23	0	47735
species	Ictalurid herpesvirus 1	22	22	10401
species	Mannheimia succiniciproducens	22	0	157673
species	Pasteurella multocida	22	5	747
species	Nocardia cyriacigeorgica	22	0	135487
species	Eubacterium siraeum	21	0	39492
species	Beijerinckia indica	21	0	533
species	Lactobacillus reuteri	21	21	1598
species	Paenibacillus mucilaginosus	20	0	61624
species	Wigglesworthia glossinidia	20	2	51229
species	Candidatus Riesia pediculicola	20	0	401619
species	Candidatus Carsonella ruddii	20	2	114186
species	Enterobacter asburiae	20	0	61645
species	Mannheimia haemolytica	20	15	75985
species	Corynebacterium maris	20	0	575200
species	Shimwellia blattae	19	0	563
species	Aminobacterium colombiense	18	0	81468
species	Spiribacter salinus	18	0	1335746
species	Orientia tsutsugamushi	18	18	784
species	Rubrivivax gelatinosus	17	0	28068
species	Corynebacterium kroppenstedtii	17	0	161879
species	uncultured Termite group 1 bacterium	16	0	167965
species	Burkholderia lata	16	16	482957
species	Campoletis sonorensis ichnovirus	16	16	10484
species	Marivirga tractuosa	16	0	1006
species	Coxiella burnetii	16	13	777
species	Gallibacterium anatis	15	0	750
species	Propionibacterium acnes	15	15	1747
species	Haliangium ochraceum	15	0	80816
species	Rhodopseudomonas palustris	14	0	1076
species	Bacteroides helcogenes	14	0	290053
species	Olsenella uli	14	0	133926
species	Helicobacter pylori	14	0	210
species	Campylobacter jejuni	14	0	197
species	Mycoplasma ovis	13	0	171632
species	Desulfitobacterium dehalogenans	13	0	36854
species	Pantoea sp. At-9b	13	13	592316
species	Pyrolobus fumarii	13	0	54252
species	Mycoplasma conjunctivae	13	0	45361
species	Thermosediminibacter oceani	13	0	291990
species	Herminiimonas arsenicoxydans	13	13	204773
species	Candidatus Portiera aleyrodidarum	13	10	91844
species	Psychromonas ingrahamii	12	0	357794
species	Mycoplasma putrefaciens	12	12	2123
species	Methylotenera versatilis	12	0	1055487
species	Lactobacillus ruminis	12	0	1623
species	Shigella sonnei	12	12	624
species	Geobacillus thermoleovorans	12	0	33941
species	Corynebacterium urealyticum	12	9	43771
species	Cellvibrio japonicus	11	0	155077
species	Acinetobacter calcoaceticus	11	0	471
species	Haemophilus ducreyi	11	0	730
species	Pectobacterium carotovorum	11	0	554
species	Lactobacillus kefiranofaciens	11	0	267818
species	Citrobacter rodentium	11	0	67825
species	Comamonas testosteroni	11	0	285
species	Desulfotomaculum acetoxidans	10	0	58138
species	Pseudomonas denitrificans	10	0	43306
species	Rahnella aquatilis	10	0	34038
species	Nakamurella multipartita	10	0	53461
species	Xanthomonas campestris	10	8	339
species	Cellulophaga algicola	10	0	59600
species	Clostridium botulinum	10	10	1491
species	Cotesia congregata bracovirus	10	10	39640
species	Pseudoxanthomonas suwonensis	10	0	314722
species	Yersinia enterocolitica	10	0	630
species	Acidithiobacillus ferrivorans	10	0	160808
species	Glaciecola nitratireducens	10	0	300231
species	Micrococcus luteus	10	0	1270
species	Thauera sp. MZ1T	9	9	85643
species	Methanococcus vannielii	9	0	2187
species	Lawsonia intracellularis	9	3	29546
species	Borrelia duttonii	9	0	40834
species	Emiliania huxleyi virus 86	8	8	181082
species	Streptococcus thermophilus	8	1	1308
species	Desulfitobacterium dichloroeliminans	8	0	233055
species	[Clostridium] difficile	8	6	1496
species	Candidatus Atelocyanobacterium thalassa	8	8	713887
species	Photorhabdus asymbiotica	8	8	291112
species	Nocardioides sp. JS614	7	7	196162
species	Caldicellulosiruptor bescii	7	0	31899
species	Edwardsiella ictaluri	7	0	67780
species	Xenorhabdus nematophila	7	0	628
species	Ralstonia solanacearum	7	0	305
species	Candidatus Moranella endobia	7	7	1048758
species	Corynebacterium glutamicum	7	2	1718
species	Caldicellulosiruptor saccharolyticus	7	0	44001
species	Streptococcus mutans	7	7	1309
species	Dickeya dadantii	7	0	204038
species	Pirellula staleyi	7	0	125
species	Vibrio splendidus	7	0	29497
species	Helicobacter cetorum	7	0	138563
species	Photobacterium profundum	7	0	74109
species	Yersinia pseudotuberculosis	6	0	633
species	Thiobacillus denitrificans	6	0	36861
species	Serratia plymuthica	6	0	82996
species	Corynebacterium jeikeium	6	0	38289
species	Streptococcus pyogenes	6	4	1314
species	Spiribacter sp. UAH-SP71	6	6	1335757
species	Desulfurispirillum indicum	6	0	936456
species	Geitlerinema sp. PCC 7407	6	6	1173025
species	Cyanobium gracile	6	0	59930
species	Methanobrevibacter ruminantium	6	0	83816
species	Bacillus amyloliquefaciens	6	3	1390
species	Kineococcus radiotolerans	6	0	131568
species	Psychrobacter arcticus	6	0	334543
species	Geobacter uraniireducens	6	0	351604
species	Candidatus Profftella armatura	5	5	669502
species	Natrialba magadii	5	0	13769
species	Xylella fastidiosa	5	2	2371
species	Halomonas elongata	5	0	2746
species	Enterobacter lignolyticus	5	0	1334193
species	Pseudomonas brassicacearum	5	0	930166
species	Candidatus Saccharibacteria bacterium RAAC3_TM7_1	5	5	1394711
species	Candidatus Baumannia cicadellinicola	5	0	186490
species	Kangiella koreensis	5	0	261964
species	Candidatus Sulcia muelleri	5	1	336810
species	Solitalea canadensis	5	0	995
species	Erwinia sp. Ejp617	5	5	215689
species	Mycobacterium leprae	5	5	1769
species	Nyamanini virus	5	5	644610
species	Pelobacter carbinolicus	5	0	19
species	Marinomonas sp. MWYL1	5	5	400668
species	Pseudomonas sp. TKP	4	4	1415630
species	Vibrio campbellii	4	0	680
species	Cyprinid herpesvirus 3	4	4	180230
species	Spirochaeta thermophila	4	4	154
species	Desulfobulbus propionicus	4	0	894
species	Caldicellulosiruptor kronotskyensis	4	0	413889
species	Alicyclobacillus acidocaldarius	4	0	405212
species	Frog virus 3	4	4	10493
species	Camelpox virus	4	4	28873
species	Calothrix parietina	4	0	32054
species	Mycoplasma cynos	4	0	171284
species	Methylomicrobium alcaliphilum	4	0	271065
species	Elusimicrobium minutum	4	0	423605
species	Methylococcus capsulatus	4	0	414
species	Bacteroides salanitronis	4	0	376805
species	Flavobacteriaceae bacterium 3519-10	4	4	531844
species	Stackebrandtia nassauensis	4	0	283811
species	Amycolicicoccus subflavus	4	0	639313
species	Pusillimonas sp. T7-7	4	4	1007105
species	Candidatus Zinderia insecticola	4	0	884215
species	Bifidobacterium animalis	4	0	28025
species	Sinorhizobium fredii	4	0	380
species	Helicobacter hepaticus	4	0	32025
species	Staphylococcus carnosus	4	0	1281
species	Paludibacter propionicigenes	3	0	185300
species	Ketogulonicigenium vulgare	3	0	92945
species	Mycobacterium sp. JLS	3	3	164757
species	Alteromonas macleodii	3	2	28108
species	Methanosarcina mazei	3	0	2209
species	Candidatus Hamiltonella defensa	3	0	138072
species	Ramlibacter tataouinensis	3	0	94132
species	Marinomonas posidonica	3	0	936476
species	Providencia stuartii	3	0	588
species	Rhinovirus A	3	3	147711
species	Streptococcus dysgalactiae	3	0	1334
species	Macrococcus caseolyticus	3	0	69966
species	Erwinia tasmaniensis	3	0	338565
species	Streptococcus equi	3	3	1336
species	Meiothermus silvanus	3	0	52022
species	Arcanobacterium haemolyticum	3	0	28264
species	Candidatus Tremblaya princeps	3	3	189385
species	Corynebacterium pseudotuberculosis	3	1	1719
species	Zymomonas mobilis	3	3	542
species	Parvularcula bermudensis	3	0	208216
species	Segniliparus rotundus	3	0	286802
species	Laribacter hongkongensis	3	0	168471
species	Rhodanobacter denitrificans	3	3	666685
species	Enterobacteria phage ID18 sensu lato	3	3	489829
species	Nautilia profundicola	3	0	244787
species	Thiocystis violascens	3	0	73141
species	Corynebacterium diphtheriae	3	0	1717
species	Influenza B virus	3	3	11520
species	Microcystis aeruginosa	3	0	1126
species	Cronobacter sakazakii	3	0	28141
species	Pseudomonas syringae group genomosp. 3	2	0	251701
species	Candidatus Uzinura diaspidicola	2	0	670956
species	Halobacillus halophilus	2	0	1570
species	Salmonella bongori	2	0	54736
species	Anaerobaculum mobile	2	0	97477
species	Solibacillus silvestris	2	0	76853
species	Borrelia crocidurae	2	0	29520
species	Chthonomonas calidirosea	2	0	454171
species	Ferrimonas balearica	2	0	44012
species	Pseudomonas mendocina	2	1	300
species	Mahella australiensis	2	0	252966
species	Serratia sp. AS13	2	2	768493
species	Acetohalobium arabaticum	2	0	28187
species	Lactobacillus brevis	2	2	1580
species	Filifactor alocis	2	0	143361
species	Campylobacter hominis	2	0	76517
species	Molluscum contagiosum virus	2	0	10279
species	Methanosalsum zhilinae	2	0	39669
species	Psychromonas sp. CNPT3	2	2	314282
species	Chlamydia pecorum	2	2	85991
species	Methylophaga frappieri	2	2	754477
species	Pseudomonas protegens	2	2	380021
species	Delftia acidovorans	2	0	80866
species	Candidatus Blochmannia floridanus	2	2	203907
species	Methanosaeta harundinacea	2	0	301375
species	Mycoplasma synoviae	2	0	2109
species	Bacillus subtilis	2	1	1423
species	Marinobacter hydrocarbonoclasticus	2	2	2743
species	Thioalkalimicrobium cyclicum	2	0	147268
species	Ectromelia virus	2	2	12643
species	Bovine herpesvirus 1	2	2	10320
species	Culex nigripalpus nucleopolyhedrovirus	2	2	130556
species	Bifidobacterium adolescentis	2	0	1680
species	Oenococcus oeni	2	0	1247
species	Legionella pneumophila	2	0	446
species	Methanoregula boonei	2	0	358766
species	Sphaerobacter thermophilus	2	0	2057
species	Enterobacter aerogenes	2	0	548
species	Bordetella petrii	2	0	94624
species	Crinalium epipsammum	2	0	241425
species	Rhodomicrobium vannielii	2	0	1069
species	Simiduia agarivorans	2	0	447471
species	Methanobrevibacter smithii	2	0	2173
species	Opitutus terrae	2	0	107709
species	Sodalis glossinidius	2	0	63612
species	Methylobacterium radiotolerans	2	0	31998
species	Mamestra configurata nucleopolyhedrovirus A	2	2	207830
species	Rhizobium leguminosarum	2	0	384
species	Tropheryma whipplei	2	2	2039
species	Leisingera methylohalidivorans	2	0	133924
species	Odoribacter splanchnicus	2	0	28118
species	Bacillus weihenstephanensis	2	0	86662
species	Weeksella virosa	2	0	1014
species	Lactobacillus salivarius	2	1	1624
species	Coprococcus catus	2	0	116085
species	secondary endosymbiont of Heteropsylla cubana	2	2	134287
species	Bacillus phage SPO1	2	2	10685
species	Marinobacter sp. BSs20148	2	2	490759
species	Chamaesiphon minutus	2	0	1173032
species	secondary endosymbiont of Ctenarytaina eucalypti	2	2	1199245
species	Natranaerobius thermophilus	2	0	375929
species	Marinitoga piezophila	2	0	149715
species	Pleurocapsa minor	2	0	54308
species	Parvibaculum lavamentivorans	2	0	256618
species	Thermodesulfatator indicus	2	0	171695
species	Wolinella succinogenes	2	0	844
species	Pseudomonas savastanoi	2	0	29438
species	Caldicellulosiruptor kristjanssonii	2	0	52765
species	Staphylococcus aureus subsp. aureus MSHR1132	2	2	985002
species	Candidatus Blochmannia vafer	2	0	251535
species	Mycoplasma gallisepticum	2	1	2096
species	Enterobacteria phage ID2 Moscow/ID/2001	2	2	511969
species	Staphylococcus haemolyticus	2	0	1283
species	Alcanivorax dieselolei	2	0	285091
species	Enterobacteria phage G4 sensu lato	2	2	374844
species	Deferribacter desulfuricans	2	0	197162
species	Streptomyces venezuelae	2	0	54571
species	Bacillus sp. 1NLA3E	2	2	666686
species	Shewanella baltica	2	0	62322
species	Streptococcus intermedius	2	2	1338
species	Brachyspira pilosicoli	1	1	52584
species	Pseudomonas sp. UW4	1	1	1207075
species	Enterobacteria phage lambda	1	1	10710
species	Variola virus	1	1	10255
species	Aliivibrio fischeri	1	1	668
species	Sulfurihydrogenibium azorense	1	0	309806
species	Saimiriine herpesvirus 2	1	1	10381
species	Desulfotomaculum gibsoniae	1	0	102134
species	Kocuria rhizophila	1	0	72000
species	Fibrobacter succinogenes	1	0	833
species	Colwellia psychrerythraea	1	0	28229
species	Streptococcus sp. I-G2	1	1	1156431
species	Anguillid herpesvirus 1	1	1	150286
species	Brevundimonas subvibrioides	1	0	74313
species	Rhodococcus jostii	1	0	132919
species	Wolbachia endosymbiont of Brugia malayi	1	0	80849
species	Human herpesvirus 7	1	1	10372
species	Candidatus Accumulibacter phosphatis	1	0	327160
species	Arthrobacter arilaitensis	1	0	256701
species	Azotobacter vinelandii	1	1	354
species	Streptomyces flavogriseus	1	0	67299
species	Intrasporangium calvum	1	0	53358
species	Meiothermus ruber	1	0	277
species	Synechococcus sp. JA-3-3Ab	1	1	321327
species	Vibrio vulnificus	1	0	672
species	Candidatus Liberibacter asiaticus	1	0	34021
species	Gordonibacter pamelaeae	1	0	471189
species	Lactobacillus buchneri	1	1	1581
species	Starkeya novella	1	0	921
species	Streptococcus pseudopneumoniae	1	0	257758
species	Syntrophus aciditrophicus	1	0	316277
species	Sphaerochaeta pleomorpha	1	0	1131707
species	Acetobacter pasteurianus	1	0	438
species	Methanococcus voltae	1	0	2188
species	Phenylobacterium zucineum	1	0	284016
species	Spiroplasma diminutum	1	0	216936
species	Cyclobacterium marinum	1	0	104
species	Thioalkalivibrio nitratireducens	1	0	186931
species	Calditerrivibrio nitroreducens	1	0	477976
species	Bacillus megaterium	1	0	1404
species	Streptosporangium roseum	1	0	2001
species	Candidatus Arthromitus sp. SFB-rat-Yit	1	1	1041504
species	Tolumonas auensis	1	0	43948
species	Spodoptera frugiperda multiple nucleopolyhedrovirus	1	1	10455
species	Leptolyngbya sp. PCC 7376	1	1	111781
species	Coriobacterium glomerans	1	0	33871
species	Brevibacillus brevis	1	0	1393
species	Pedobacter saltans	1	0	151895
species	Polaromonas sp. JS666	1	1	296591
species	Orgyia leucostigma NPV	1	1	490711
species	Tistrella mobilis	1	0	171437
species	Klebsiella oxytoca	1	1	571
species	Spiroplasma syrphidicola	1	0	216945
species	Lactococcus lactis	1	0	1358
species	Mycoplasma crocodyli	1	0	50052
species	Tetragenococcus halophilus	1	0	51669
species	Kosmotoga olearia	1	0	651457
species	Aerococcus urinae	1	0	1376
species	Borrelia recurrentis	1	0	44449
species	Megasphaera elsdenii	1	0	907
species	Candidatus Amoebophilus asiaticus	1	0	281120
species	Saccharomonospora viridis	1	0	1852
species	Candidatus Hodgkinia cicadicola	1	0	573658
species	Beutenbergia cavernae	1	0	84757
species	Methylocystis sp. SC2	1	1	187303
species	Candidatus Tremblaya phenacola	1	0	1010676
species	Cronobacter turicensis	1	0	413502
species	Nostoc sp. PCC 7107	1	1	317936
species	Metallosphaera cuprina	1	0	1006005
species	Taterapox virus	1	1	28871
species	Aquifex aeolicus	1	0	63363
species	Photorhabdus luminescens	1	0	29488
species	Geodermatophilus obscurus	1	0	1861
species	Shewanella pealeana	1	0	70864
species	Streptococcus pasteurianus	1	0	197614
species	Vibrio anguillarum	1	0	55601
species	Erwinia billingiae	1	0	182337
species	Paenibacillus polymyxa	1	0	1406
species	Geobacter daltonii	1	0	1203471
species	Pseudomonas fulva	1	0	47880
species	Thermotoga maritima	1	0	2336
species	Magnetospirillum gryphiswaldense	1	0	55518
species	Bacillus pumilus	1	0	1408
species	Alkalilimnicola ehrlichii	1	0	351052
species	Torque teno midi virus 2	1	1	687380
species	Taylorella asinigenitalis	1	1	84590
species	Tepidanaerobacter acetatoxydans	1	0	499229
species	Mobiluncus curtisii	1	0	2051
species	Rhodospirillum rubrum	1	1	1085
species	Lactobacillus plantarum	1	0	1590
species	Desulfovibrio gigas	1	0	879
species	Pediococcus pentosaceus	1	1	1255
species	Wolbachia endosymbiont of Onchocerca ochengi	1	1	100901
species	Trichodesmium erythraeum	1	0	1206
species	Micavibrio aeruginosavorus	1	1	349221
species	Thermobaculum terrenum	1	0	166501
species	Phycisphaera mikurensis	1	0	547188
species	Streptococcus parauberis	1	0	1348
species	Thermincola potens	1	0	863643
species	Shigella boydii	1	0	621
species	Haloquadratum walsbyi	1	0	293091
species	Dichelobacter nodosus	1	0	870
species	Desulfohalobium retbaense	1	0	45663
species	Thalassolituus oleivorans	1	0	187493
species	Collimonas fungivorans	1	0	158899
species	Persephonella marina	1	0	309805
species	Dinoroseobacter shibae	1	0	215813
species	Sulfuricella denitrificans	1	0	649841
species	Methylophaga nitratireducenticrescens	1	1	754476
species	Teredinibacter turnerae	1	0	2426
species	Acholeplasma laidlawii	1	0	2148
species	Chromobacterium violaceum	1	0	536
species	Halothiobacillus neapolitanus	1	0	927
species	Candidatus Kinetoplastibacterium desouzaii	1	0	994692
species	Salinibacter ruber	1	1	146919
species	Anabaena sp. 90	1	1	46234
species	Planctomyces brasiliensis	1	0	119
species	Caulobacter sp. K31	1	1	366602
species	Methylomonas methanica	1	0	421
species	Chitinophaga pinensis	1	0	79329
species	Agrobacterium vitis	1	0	373
species	Mycoplasma mobile	1	0	2118
species	Sulfobacillus acidophilus	1	1	53633
species	Rivularia sp. PCC 7116	1	1	373994
species	Mycobacterium tuberculosis	1	0	1773
species	Ureaplasma urealyticum	1	0	2130
species	Staphylococcus saprophyticus	1	0	29385
species	Methylocella silvestris	1	0	199596
species	Jonesia denitrificans	1	0	43674
species	Candidatus Phytoplasma mali	1	1	37692
species	Caldisericum exile	1	0	693075
species	Methylobacterium nodulans	1	0	114616
species	Desulfovibrio magneticus	1	0	184917
species	Enterobacter sp. R4-368	1	1	1166130
species	Helicobacter cinaedi	1	0	213
species	Oceanithermus profundus	1	0	187137
species	Escherichia fergusonii	1	0	564
species	Actinoplanes friuliensis	1	0	196914
species	Mycoplasma wenyonii	1	0	65123
species	Enterococcus casseliflavus	1	0	37734
species	Allochromatium vinosum	1	0	1049
species	Oscillatoria nigro-viridis	1	0	482564
species	Shewanella violacea	1	0	60217
species	Mycoplasma mycoides	1	0	2102
species	Azospirillum brasilense	1	0	192
species	Calyptogena okutanii thioautotrophic gill symbiont	1	0	410330
species	Candidatus Kinetoplastibacterium crithidii	1	1	33056
species	Human herpesvirus 4	1	1	10376
species	Francisella tularensis	1	0	263
species	Streptococcus iniae	1	0	1346
species	Flavobacterium johnsoniae	1	0	986
species	Lactobacillus johnsonii	1	0	33959
species	Candidatus Pelagibacter sp. IMCC9063	1	1	1002672
species	gamma proteobacterium HdN1	1	1	83406
species	Arcobacter nitrofigilis	1	0	28199
species	Pseudomonas resinovorans	1	0	53412
species	delta proteobacterium BABL1	1	1	673862
species	Onion yellows phytoplasma	1	0	100379
species	Rhodospirillum photometricum	1	0	1084
species	Thioalkalivibrio sulfidophilus	1	0	1033854
species	Pseudoalteromonas haloplanktis	1	0	228
species	Listeria ivanovii	1	0	1638
species	Pelagibacterium halotolerans	1	0	531813
species	Runella slithyformis	1	0	106
species	Klebsiella variicola	1	0	244366
species	Herbaspirillum seropedicae	1	0	964
subspecies	Fusobacterium nucleatum subsp. animalis	1539	0	76859
subspecies	Fusobacterium nucleatum subsp. nucleatum	878	0	76856
subspecies	Fusobacterium nucleatum subsp. vincentii	641	0	155615
subspecies	Morganella morganii subsp. morganii	359	0	180434
subspecies	Caldanaerobacter subterraneus subsp. tengcongensis	58	0	119072
subspecies	Enterobacter cloacae subsp. cloacae	42	0	336306
subspecies	Staphylococcus aureus subsp. aureus	38	8	46170
subspecies	Salmonella enterica subsp. enterica	36	5	59201
subspecies	Streptococcus constellatus subsp. pharyngis	36	30	184250
subspecies	Selenomonas ruminantium subsp. lactilytica	24	0	114197
subspecies	Beijerinckia indica subsp. indica	21	0	31994
subspecies	Campylobacter jejuni subsp. jejuni	14	0	32022
subspecies	Pasteurella multocida subsp. multocida	13	0	44283
subspecies	Pectobacterium carotovorum subsp. carotovorum	11	5	555
subspecies	Yersinia enterocolitica subsp. palearctica	10	0	150053
subspecies	Pseudomonas brassicacearum subsp. brassicacearum	5	0	86264
subspecies	Bifidobacterium animalis subsp. lactis	4	4	302911
subspecies	Salmonella enterica subsp. arizonae	4	0	59203
subspecies	Alicyclobacillus acidocaldarius subsp. acidocaldarius	4	4	1388
subspecies	Staphylococcus carnosus subsp. carnosus	4	0	147448
subspecies	Streptococcus dysgalactiae subsp. equisimilis	3	2	119602
subspecies	Legionella pneumophila subsp. pneumophila	2	0	91891
subspecies	Mycoplasma mycoides subsp. mycoides	1	0	2103
subspecies	Staphylococcus saprophyticus subsp. saprophyticus	1	0	147452
subspecies	Bacillus amyloliquefaciens subsp. plantarum	1	1	1054400
subspecies	Lactococcus lactis subsp. lactis	1	0	1360
subspecies	Listeria ivanovii subsp. ivanovii	1	0	202751
subspecies	Francisella tularensis subsp. holarctica	1	0	119857
subspecies	Fibrobacter succinogenes subsp. succinogenes	1	0	834
subspecies	Photorhabdus luminescens subsp. laumondii	1	0	141679
subspecies	Klebsiella pneumoniae subsp. pneumoniae	1	1	72407
strain	Achromobacter xylosoxidans NBRC 15126 = ATCC 27061	254224	254224	1216976
strain	Moraxella catarrhalis RH4	125359	125359	749219
strain	Corynebacterium aurimucosum ATCC 700975	11169	11169	548476
strain	Mycoplasma hyopneumoniae J	6038	6038	262719
strain	Rothia mucilaginosa DY-18	3672	3672	680646
strain	Haemophilus parainfluenzae T3T1	3202	3202	862965
strain	Prevotella melaninogenica ATCC 25845	3132	3132	553174
strain	Neisseria gonorrhoeae TCDC-NG08107	2153	2153	940296
strain	Mycoplasma hyopneumoniae 232	1868	1868	295358
strain	Corynebacterium callunae DSM 20147	1751	1751	1121353
strain	Fusobacterium nucleatum subsp. animalis 4_8	1539	1539	469607
strain	Veillonella parvula DSM 2008	1516	1516	479436
strain	Porphyromonas asaccharolytica DSM 20707	1434	1434	879243
strain	Neisseria meningitidis G2136	1345	1345	935599
strain	Serratia marcescens WW4	1106	1106	435998
strain	Mycoplasma arthritidis 158L3-1	1082	1082	243272
strain	Haemophilus influenzae KR494	1066	1066	1334187
strain	Serratia marcescens FGI94	967	967	1249634
strain	Tannerella forsythia ATCC 43037	900	900	203275
strain	Fusobacterium nucleatum subsp. nucleatum ATCC 25586	878	878	190304
strain	Capnocytophaga ochracea DSM 7271	874	874	521097
strain	Hahella chejuensis KCTC 2396	803	803	349521
strain	Neisseria lactamica 020-06	714	714	489653
strain	Treponema denticola ATCC 35405	680	680	243275
strain	Bacillus thuringiensis MC28	675	675	1195464
strain	Aggregatibacter aphrophilus NJ8700	657	657	634176
strain	Fusobacterium nucleatum subsp. vincentii 3_1_36A2	641	641	469604
strain	Rothia dentocariosa ATCC 17931	523	523	762948
strain	Prevotella sp. oral taxon 299 str. F0039	500	500	575614
strain	Corynebacterium argentoratense DSM 44202	473	473	1348662
strain	Atopobium parvulum DSM 20469	457	457	521095
strain	Mycoplasma hominis ATCC 23114	456	456	347256
strain	Haemophilus influenzae 86-028NP	442	442	281310
strain	Corynebacterium resistens DSM 45100	427	427	662755
strain	Streptobacillus moniliformis DSM 12112	417	417	519441
strain	Prevotella denticola F0289	390	390	767031
strain	Burkholderiales Genera incertae sedis	382	52	224471
strain	Anaerococcus prevotii DSM 20548	360	360	525919
strain	Haemophilus influenzae PittEE	360	360	374930
strain	Morganella morganii subsp. morganii KT	359	359	1124991
strain	Escherichia coli O157:H7 str. EC4115	349	349	444450
strain	Lactobacillus gasseri ATCC 33323	317	317	324831
strain	Methylibium petroleiphilum PM1	312	312	420662
strain	Haemophilus influenzae F3047	306	306	935897
strain	Treponema brennaborense DSM 12168	263	263	906968
strain	Influenza A virus (A/New York/392/2004(H3N2))	218	218	335341
strain	Leptotrichia buccalis C-1013-b	191	191	523794
strain	Streptococcus parasanguinis ATCC 15912	190	190	760570
strain	Sebaldella termitidis ATCC 33386	181	181	526218
strain	Parabacteroides distasonis ATCC 8503	178	178	435591
strain	Thermoanaerobacter wiegelii Rt8.B1	159	159	697303
strain	Bacteroides vulgatus ATCC 8482	153	153	435590
strain	Haemophilus influenzae 10810	150	150	862964
strain	Prevotella ruminicola 23	148	148	264731
strain	Fibrella aestuarina BUZ 2	142	142	1166018
strain	Finegoldia magna ATCC 29328	133	133	334413
strain	Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2	125	125	511995
strain	Mycoplasma hyopneumoniae 7422	124	124	754503
strain	Streptococcus suis JS14	124	124	945704
strain	Prevotella intermedia 17	116	116	246198
strain	Actinobacillus pleuropneumoniae serovar 5b str. L20	102	102	416269
strain	Treponema pedis str. T A4	101	101	1291379
strain	Kribbella flavida DSM 17836	101	101	479435
strain	Stenotrophomonas maltophilia JV3	98	98	868597
strain	Stenotrophomonas maltophilia D457	94	94	1163399
strain	Clostridium lentocellum DSM 5427	93	93	642492
strain	Butyrivibrio proteoclasticus B316	93	93	515622
strain	Thermodesulfobacterium geofontis OPF15	91	91	795359
strain	Natronococcus occultus SP4	91	91	694430
strain	Mycoplasma hyorhinis HUB-1	91	91	872331
strain	Haemophilus influenzae PittGG	89	89	374931
strain	Streptococcus sanguinis SK36	84	84	388919
strain	Carnobacterium maltaromaticum LMA28	79	79	1234679
strain	Sulfolobus islandicus M.16.27	77	77	427318
strain	Leptospira biflexa serovar Patoc	77	77	145259
strain	Stenotrophomonas maltophilia K279a	75	75	522373
strain	Mycoplasma pulmonis UAB CTIP	71	71	272635
strain	Propionibacterium avidum 44067	71	71	1170318
strain	Streptococcus salivarius JIM8777	68	68	347253
strain	Streptococcus oligofermentans AS 1.3089	65	65	1302863
strain	Enterococcus faecalis V583	63	63	226185
strain	Streptomyces cattleya NRRL 8057 = DSM 46488	61	61	1003195
strain	Mycobacterium smegmatis JS623	61	61	710686
strain	Buchnera aphidicola BCc	58	58	372461
strain	Thermoanaerobacter tengcongensis MB4	58	58	273068
strain	Helicobacter bizzozeronii CIII-1	58	58	1002804
strain	Corynebacterium halotolerans YIM 70093 = DSM 44683	57	57	1121362
strain	Lactobacillus sanfranciscensis TMW 1.1304	56	56	714313
strain	Mycoplasma suis KI3806	56	56	708248
strain	Alistipes finegoldii DSM 17242	55	55	679935
strain	Yersinia pestis D182038	55	55	637385
strain	Haemophilus somnus 129PT	54	54	205914
strain	Streptococcus parasanguinis FW213	52	52	1114965
strain	Haemophilus influenzae R2866	52	52	262728
strain	Hyphomicrobium denitrificans 1NES1	51	51	670307
strain	Escherichia coli UMN026	51	51	585056
strain	Acidothermus cellulolyticus 11B	50	50	351607
strain	Ruminococcus albus 7	50	50	697329
strain	Porphyromonas gingivalis W83	49	49	242619
strain	Magnetococcus marinus MC-1	49	49	156889
strain	Weissella koreensis KACC 15510	49	49	1045854
strain	Actinobacillus suis H91-0380	49	49	696748
strain	Candidatus Liberibacter americanus str. Sao Paulo	47	47	1261131
strain	Halovivax ruber XH-70	46	46	797302
strain	Treponema succinifaciens DSM 2489	44	44	869209
strain	Mycoplasma hyopneumoniae 7448	44	44	262722
strain	Blattabacterium sp. (Blatta orientalis) str. Tarazona	41	41	1072467
strain	Enterobacter cloacae subsp. cloacae NCTC 9394	41	41	718254
strain	Streptococcus oralis Uo5	41	41	927666
strain	Desulfococcus oleovorans Hxd3	40	40	96561
strain	Bartonella tribocorum CIP 105476	39	39	382640
strain	Bacillus infantis NRRL B-14911	39	39	1367477
strain	Taylorella equigenitalis ATCC 35865	38	38	743973
strain	Rickettsia africae ESF-5	38	38	347255
strain	Aeromonas hydrophila ML09-119	38	38	1288394
strain	Prevotella dentalis DSM 3688	36	36	908937
strain	Pseudomonas fluorescens SBW25	36	36	216595
strain	Oscillatoria acuminata PCC 6304	35	35	56110
strain	Erysipelothrix rhusiopathiae str. Fujisawa	34	34	650150
strain	Serratia symbiotica str. 'Cinara cedri'	34	34	568817
strain	Klebsiella pneumoniae JM45	31	31	1380908
strain	Buchnera aphidicola str. Bp (Baizongia pistaciae)	31	31	224915
strain	Porphyromonas gingivalis ATCC 33277	31	31	431947
strain	Parachlamydia acanthamoebae UV-7	30	30	765952
strain	Bifidobacterium thermophilum RBL67	29	29	1254439
strain	Thiomicrospira crunogena XCL-2	28	28	317025
strain	Capnocytophaga canimorsus Cc5	27	27	860228
strain	Truepera radiovictrix DSM 17093	26	26	649638
strain	Bacillus thuringiensis YBT-1518	25	25	529122
strain	Pseudomonas poae RE*1-1-14	24	24	1282356
strain	Bacillus cereus E33L	24	24	288681
strain	Selenomonas ruminantium subsp. lactilytica TAM6421	24	24	927704
strain	Mycoplasma genitalium M6282	24	24	662946
strain	Haemophilus parasuis SH0165	23	23	557723
strain	Verminephrobacter eiseniae EF01-2	23	23	391735
strain	Sorangium cellulosum So0157-2	23	23	1254432
strain	Bibersteinia trehalosi USDA-ARS-USMARC-192	23	23	1171377
strain	Actinobacillus succinogenes 130Z	23	23	339671
strain	Mannheimia succiniciproducens MBEL55E	22	22	221988
strain	Nocardia cyriacigeorgica GUH-2	22	22	1127134
strain	Eubacterium siraeum V10Sc8a	21	21	717961
strain	Haemophilus influenzae Rd KW20	21	21	71421
strain	Beijerinckia indica subsp. indica ATCC 9039	21	21	395963
strain	Candidatus Riesia pediculicola USDA	20	20	515618
strain	Escherichia coli ABU 83972	20	20	655817
strain	Corynebacterium maris DSM 45190	20	20	1224163
strain	Enterobacter asburiae LF7a	20	20	640513
strain	Paenibacillus mucilaginosus K02	20	20	997761
strain	Haemophilus influenzae R2846	19	19	262727
strain	Shimwellia blattae DSM 4481 = NBRC 105725	19	19	630626
strain	Spiribacter salinus M19-40	18	18	1260251
strain	Streptococcus anginosus C1051	18	18	862970
strain	Aminobacterium colombiense DSM 12261	18	18	572547
strain	Corynebacterium kroppenstedtii DSM 44385	17	17	645127
strain	Rubrivivax gelatinosus IL144	17	17	983917
strain	ant, tsetse, mealybug, aphid, etc. endosymbionts	17	3	84563
strain	Staphylococcus aureus subsp. aureus JH1	16	16	359787
strain	Marivirga tractuosa DSM 4126	16	16	643867
strain	Klebsiella pneumoniae KCTC 2242	16	16	1049565
strain	Haemophilus parasuis ZJ0906	15	15	1322346
strain	Pseudomonas stutzeri DSM 10701	15	15	1123519
strain	Haliangium ochraceum DSM 14365	15	15	502025
strain	Gallibacterium anatis UMN179	15	15	1005058
strain	Rhodopseudomonas palustris BisB5	14	14	316057
strain	Bacteroides helcogenes P 36-108	14	14	693979
strain	Campylobacter jejuni subsp. jejuni PT14	14	14	1201032
strain	Olsenella uli DSM 7084	14	14	633147
strain	Mycoplasma conjunctivae HRC/581	13	13	572263
strain	Proteus mirabilis BB2000	13	13	1266738
strain	Thermosediminibacter oceani DSM 16646	13	13	555079
strain	Desulfitobacterium dehalogenans ATCC 51507	13	13	756499
strain	Mycoplasma ovis str. Michigan	13	13	1415773
strain	Pyrolobus fumarii 1A	13	13	694429
strain	Lactobacillus ruminis ATCC 27782	12	12	1069534
strain	Psychromonas ingrahamii 37	12	12	357804
strain	Methylotenera versatilis 301	12	12	666681
strain	Geobacillus thermoleovorans CCB_US3_UF5	12	12	1111068
strain	Lactobacillus rhamnosus LOCK900	11	11	1316933
strain	Acinetobacter calcoaceticus PHEA-2	11	11	871585
strain	Cellvibrio japonicus Ueda107	11	11	498211
strain	Haemophilus ducreyi 35000HP	11	11	233412
strain	Citrobacter rodentium ICC168	11	11	637910
strain	Lactobacillus kefiranofaciens ZW3	11	11	1033837
strain	Vibrio cholerae O1	11	1	127906
strain	Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony)	11	11	1142511
strain	Pasteurella multocida subsp. multocida str. Pm70	11	11	272843
strain	Comamonas testosteroni CNB-2	11	11	688245
strain	Acidithiobacillus ferrivorans SS3	10	10	743299
strain	Pseudomonas denitrificans ATCC 13867	10	10	1294143
strain	Acinetobacter baumannii BJAB0715	10	10	1096996
strain	Burkholderia mallei NCTC 10229	10	10	412022
strain	Micrococcus luteus NCTC 2665	10	10	465515
strain	Rahnella aquatilis CIP 78.65 = ATCC 33071	10	10	745277
strain	Glaciecola nitratireducens FR1064	10	10	1085623
strain	Nakamurella multipartita DSM 44233	10	10	479431
strain	Cellulophaga algicola DSM 14237	10	10	688270
strain	Pseudoxanthomonas suwonensis 11-1	10	10	743721
strain	Desulfotomaculum acetoxidans DSM 771	10	10	485916
strain	Enterococcus faecalis 62	9	9	936153
strain	Methanococcus vannielii SB	9	9	406327
strain	Borrelia duttonii Ly	9	9	412419
strain	Candidatus Carsonella ruddii CE isolate Thao2000	9	9	1202536
strain	Vibrio cholerae LMA3984-4	8	8	935297
strain	Desulfitobacterium dichloroeliminans LMG P-21439	8	8	871963
strain	Helicobacter pylori B38	8	8	592205
strain	Salmonella enterica subsp. enterica serovar Agona	8	3	58095
strain	Helicobacter cetorum MIT 99-5656	7	7	1163745
strain	Photobacterium profundum SS9	7	7	298386
strain	Streptococcus suis 98HAH33	7	7	391296
strain	Ralstonia solanacearum CMR15	7	7	859655
strain	Caldicellulosiruptor saccharolyticus DSM 8903	7	7	351627
strain	Edwardsiella ictaluri 93-146	7	7	634503
strain	Escherichia coli KO11FL	7	7	595495
strain	Caldicellulosiruptor bescii DSM 6725	7	7	521460
strain	Vibrio splendidus LGP32	7	7	575788
strain	Xenorhabdus nematophila ATCC 19061	7	7	406817
strain	Streptococcus agalactiae 2603V/R	7	7	208435
strain	Streptococcus agalactiae ILRI005	7	7	1309807
strain	Pirellula staleyi DSM 6068	7	7	530564
strain	Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis	7	7	36870
strain	Acinetobacter baumannii SDF	7	7	509170
strain	Yersinia pseudotuberculosis IP 31758	6	6	349747
strain	Vibrio cholerae IEC224	6	6	1134456
strain	Psychrobacter arcticus 273-4	6	6	259536
strain	Kineococcus radiotolerans SRS30216 = ATCC BAA-149	6	6	266940
strain	Streptococcus constellatus subsp. pharyngis C232	6	6	696216
strain	Cyanobium gracile PCC 6307	6	6	292564
strain	Methanobrevibacter ruminantium M1	6	6	634498
strain	Yersinia enterocolitica subsp. palearctica Y11	6	6	930944
strain	Escherichia coli O104:H4	6	3	1038927
strain	Thiobacillus denitrificans ATCC 25259	6	6	292415
strain	Serratia plymuthica S13	6	6	1348660
strain	Pectobacterium carotovorum subsp. carotovorum PCC21	6	6	1218933
strain	Desulfurispirillum indicum S5	6	6	653733
strain	Acinetobacter baumannii AB307-0294	6	6	557600
strain	Lawsonia intracellularis N343	6	6	1234378
strain	Pseudomonas aeruginosa LES431	6	6	1408272
strain	Corynebacterium jeikeium K411	6	6	306537
strain	Geobacter uraniireducens Rf4	6	6	351605
strain	Aggregatibacter actinomycetemcomitans D11S-1	6	6	668336
strain	Shigella flexneri 5 str. 8401	5	5	373384
strain	Escherichia coli K-12	5	5	83333
strain	Salmonella enterica subsp. enterica serovar Enteritidis str. P125109	5	5	550537
strain	Halomonas elongata DSM 2581	5	5	768066
strain	Mycoplasma hyopneumoniae 168	5	1	907287
strain	Kangiella koreensis DSM 16069	5	5	523791
strain	Dickeya dadantii 3937	5	5	198628
strain	Enterobacter lignolyticus SCF1	5	5	701347
strain	Pelobacter carbinolicus DSM 2380	5	5	338963
strain	Baumannia cicadellinicola str. Hc (Homalodisca coagulata)	5	5	374463
strain	Pseudomonas brassicacearum subsp. brassicacearum NFM421	5	5	994484
strain	Streptococcus thermophilus LMD-9	5	5	322159
strain	Staphylococcus aureus 08BA02176	5	5	1229492
strain	Streptococcus suis D12	5	5	1004952
strain	Burkholderia mallei NCTC 10247	5	5	320389
strain	Candidatus Carsonella ruddii HT isolate Thao2000	5	5	1202539
strain	Solitalea canadensis DSM 3403	5	5	929556
strain	Natrialba magadii ATCC 43099	5	5	547559
strain	Helicobacter hepaticus ATCC 51449	4	4	235279
strain	Staphylococcus carnosus subsp. carnosus TM300	4	4	396513
strain	Streptococcus suis TL13	4	4	1276647
strain	Methylomicrobium alcaliphilum 20Z	4	4	1091494
strain	Vibrio campbellii ATCC BAA-1116	4	4	338187
strain	Bacteroides salanitronis DSM 18170	4	4	667015
strain	Elusimicrobium minutum Pei191	4	4	445932
strain	Acinetobacter baumannii 1656-2	4	4	696749
strain	Candidatus Zinderia insecticola CARI	4	4	871271
strain	Desulfobulbus propionicus DSM 2032	4	4	577650
strain	Corynebacterium glutamicum SCgG2	4	4	1232383
strain	Buchnera aphidicola str. Ak (Acyrthosiphon kondoi)	4	4	1005090
strain	Pasteurella multocida 36950	4	4	1075089
strain	Calothrix sp. PCC 6303	4	4	1170562
strain	Sinorhizobium fredii NGR234	4	4	394
strain	Helicobacter pylori Aklavik117	4	4	1055531
strain	Amycolicicoccus subflavus DQS3-9A1	4	4	443218
strain	Stackebrandtia nassauensis DSM 44728	4	4	446470
strain	Methylococcus capsulatus str. Bath	4	4	243233
strain	Mycoplasma hyopneumoniae 168-L	4	4	1116211
strain	Salmonella enterica subsp. arizonae serovar 62:z4,z23:- str. RSK2980	4	4	882884
strain	Caldicellulosiruptor kronotskyensis 2002	4	4	632348
strain	Candidatus Sulcia muelleri SMDSEM	4	4	595499
strain	Rhizobium/Agrobacterium group	4	1	227290
strain	Escherichia coli Xuzhou21	4	4	741093
strain	Mycoplasma cynos C142	4	4	1246955
strain	Salmonella enterica subsp. enterica serovar Typhi	4	1	90370
strain	Yersinia enterocolitica subsp. palearctica 105.5R(r)	4	4	994476
strain	Ramlibacter tataouinensis TTB310	3	3	365046
strain	Pseudomonas aeruginosa B136-33	3	3	1280938
strain	Laribacter hongkongensis HLHK9	3	3	557598
strain	Paludibacter propionicigenes WB4	3	3	694427
strain	Parvularcula bermudensis HTCC2503	3	3	314260
strain	Buchnera aphidicola str. Sg (Schizaphis graminum)	3	3	198804
strain	Corynebacterium urealyticum DSM 7111	3	3	1267754
strain	Pseudomonas aeruginosa RP73	3	3	1340851
strain	Thiocystis violascens DSM 198	3	3	765911
strain	Cronobacter sakazakii SP291	3	3	956149
strain	Marinomonas posidonica IVIA-Po-181	3	3	491952
strain	Staphylococcus aureus 04-02981	3	3	703339
strain	Eubacterium rectale ATCC 33656	3	3	515619
strain	Escherichia coli O111:H- str. 11128	3	3	585396
strain	Acinetobacter baumannii BJAB0868	3	3	1096997
strain	Streptococcus anginosus C238	3	3	862971
strain	Meiothermus silvanus DSM 9946	3	3	526227
strain	Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)	3	3	572265
strain	Macrococcus caseolyticus JCSC5402	3	3	458233
strain	Escherichia coli E24377A	3	3	331111
strain	Xylella fastidiosa 9a5c	3	3	160492
strain	Mannheimia haemolytica USDA-ARS-USMARC-185	3	3	1249526
strain	Salmonella enterica subsp. enterica serovar Agona str. 24249	3	3	1406860
strain	Providencia stuartii MRSN 2154	3	3	1157951
strain	Microcystis aeruginosa NIES-843	3	3	449447
strain	Erwinia tasmaniensis Et1/99	3	3	465817
strain	Vibrio cholerae O1 str. 2010EL-1786	3	3	914149
strain	Salmonella enterica subsp. enterica serovar Typhi str. CT18	3	3	220341
strain	Vibrio cholerae O395	3	3	345073
strain	Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67	3	3	321314
strain	Ketogulonicigenium vulgare Y25	3	3	880591
strain	Arcanobacterium haemolyticum DSM 20595	3	3	644284
strain	Segniliparus rotundus DSM 44985	3	3	640132
strain	Buchnera aphidicola (Cinara tujafilina)	3	3	261317
strain	Coxiella burnetii CbuK_Q154	3	3	434924
strain	Nautilia profundicola AmH	3	3	598659
strain	Escherichia coli O104:H4 str. 2009EL-2050	3	3	1134782
strain	Candidatus Portiera aleyrodidarum TV	3	3	1297582
strain	Salmonella enterica subsp. enterica serovar Typhimurium str. DT2	2	2	568709
strain	Corynebacterium diphtheriae PW8	2	2	698964
strain	Crinalium epipsammum PCC 9333	2	2	1173022
strain	Natranaerobius thermophilus JW/NM-WN-LF	2	2	457570
strain	Salmonella enterica subsp. enterica serovar Agona str. SL483	2	2	454166
strain	Alcanivorax dieselolei B5	2	2	930169
strain	Parvibaculum lavamentivorans DS-1	2	2	402881
strain	Molluscum contagiosum virus subtype 1	2	2	10280
strain	Ferrimonas balearica DSM 9799	2	2	550540
strain	Methylobacterium radiotolerans JCM 2831	2	2	426355
strain	Campylobacter hominis ATCC BAA-381	2	2	360107
strain	Sphaerobacter thermophilus DSM 20745	2	2	479434
strain	Staphylococcus aureus subsp. aureus LGA251	2	2	985006
strain	Mycoplasma synoviae 53	2	2	262723
strain	Clostridiales genomosp. BVAB3 str. UPII9-5	2	2	699246
strain	Bacillus amyloliquefaciens XH7	2	2	1034836
strain	Salmonella enterica subsp. enterica serovar Typhimurium str. D23580	2	2	568708
strain	Escherichia coli O103:H2 str. 12009	2	2	585395
strain	Coprococcus catus GD/7	2	2	717962
strain	Candidatus Uzinura diaspidicola str. ASNER	2	2	1133592
strain	Simiduia agarivorans SA1 = DSM 21679	2	2	1117647
strain	Filifactor alocis ATCC 35896	2	2	546269
strain	Rhodomicrobium vannielii ATCC 17100	2	2	648757
strain	Thermodesulfatator indicus DSM 15286	2	2	667014
strain	Methanosarcina mazei Go1	2	2	192952
strain	Corynebacterium pseudotuberculosis 31	2	2	1087451
strain	Streptococcus pyogenes MGAS6180	2	2	319701
strain	Delftia acidovorans SPH-1	2	2	398578
strain	Shewanella baltica OS117	2	2	693970
strain	Odoribacter splanchnicus DSM 220712	2	2	709991
strain	Salmonella enterica subsp. enterica serovar Cubana str. CFSAN002050	2	2	1271863
strain	Candidatus Carsonella ruddii PC isolate NHV	2	2	1202540
strain	Weeksella virosa DSM 16922	2	2	865938
strain	Caldicellulosiruptor kristjanssonii I77R1B	2	2	632335
strain	Mahella australiensis 50-1 BON	2	2	697281
strain	Pseudomonas stutzeri ATCC 17588 = LMG 11199	2	2	96563
strain	Streptococcus pneumoniae Hungary19A-6	2	2	487214
strain	Marinitoga piezophila KA3	2	2	443254
strain	Pleurocapsa sp. PCC 7327	2	2	118163
strain	Rhizobium leguminosarum bv. viciae 3841	2	2	216596
strain	Leisingera methylohalidivorans DSM 14336	2	2	999552
strain	Pasteurella multocida subsp. multocida str. 3480	2	2	584721
strain	Escherichia coli O127:H6 str. E2348/69	2	2	574521
strain	Escherichia coli APEC O1	2	2	405955
strain	Chamaesiphon minutus PCC 6605	2	2	1173020
strain	Staphylococcus aureus subsp. aureus ST228	2	2	1074919
strain	Oenococcus oeni PSU-1	2	2	203123
strain	Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1	2	2	990282
strain	Bacillus cereus biovar anthracis str. CI	2	2	637380
strain	Mannheimia haemolytica D171	2	2	1311759
strain	Salmonella enterica subsp. enterica serovar Typhimurium str. 798	2	2	1008297
strain	Escherichia coli W	2	2	566546
strain	Bacillus weihenstephanensis KBAB4	2	2	315730
strain	Solibacillus silvestris StLB046	2	2	1002809
strain	Escherichia coli SE11	2	2	409438
strain	Candidatus Blochmannia vafer str. BVAF	2	2	859654
strain	Staphylococcus aureus subsp. aureus NCTC 8325	2	2	93061
strain	Acinetobacter baumannii ATCC 17978	2	2	400667
strain	Methanosaeta harundinacea 6Ac	2	2	1110509
strain	Pseudomonas syringae pv. tomato str. DC3000	2	2	223283
strain	Anaerobaculum mobile DSM 13181	2	2	891968
strain	Methanoregula boonei 6A8	2	2	456442
strain	Deferribacter desulfuricans SSM1	2	2	639282
strain	Streptomyces venezuelae ATCC 10712	2	2	953739
strain	Pseudomonas syringae pv. phaseolicola 1448A	2	2	264730
strain	Bifidobacterium adolescentis ATCC 15703	2	2	367928
strain	Dickeya dadantii Ech586	2	2	590409
strain	Wolinella succinogenes DSM 1740	2	2	273121
strain	Escherichia coli 55989	2	2	585055
strain	Mycoplasma suis str. Illinois	2	2	768700
strain	Borrelia crocidurae str. Achema	2	2	1155096
strain	Acetohalobium arabaticum DSM 5501	2	2	574087
strain	Thioalkalimicrobium cyclicum ALM1	2	2	717773
strain	Staphylococcus aureus subsp. aureus ED98	2	2	681288
strain	Legionella pneumophila subsp. pneumophila str. Thunder Bay	2	2	1199191
strain	Opitutus terrae PB90-1	2	2	452637
strain	Acinetobacter baumannii ACICU	2	2	405416
strain	Aggregatibacter actinomycetemcomitans ANH9381	2	2	754507
strain	Xanthomonas campestris pv. campestris str. ATCC 33913	2	2	190485
strain	Chthonomonas calidirosea T49	2	2	1303518
strain	Methanosalsum zhilinae DSM 4017	2	2	679901
strain	Sodalis glossinidius str. 'morsitans'	2	2	343509
strain	Methanobrevibacter smithii ATCC 35061	2	2	420247
strain	Neisseria gonorrhoeae FA 1090	2	2	242231
strain	Staphylococcus aureus Bmb9393	2	2	1321369
strain	Staphylococcus haemolyticus JCSC1435	2	2	279808
strain	Enterobacter aerogenes EA1509E	2	2	935296
strain	Bordetella petrii DSM 12804	2	2	340100
strain	Halobacillus halophilus DSM 2266	2	2	866895
strain	Vibrio cholerae M66-2	2	2	579112
strain	Streptococcus agalactiae ILRI112	1	1	1318615
strain	Pelagibacterium halotolerans B2	1	1	1082931
strain	Teredinibacter turnerae T7901	1	1	377629
strain	Escherichia fergusonii ATCC 35469	1	1	585054
strain	Paenibacillus polymyxa M1	1	1	1052684
strain	Arcobacter nitrofigilis DSM 7299	1	1	572480
strain	Streptococcus pneumoniae CGSP14	1	1	516950
strain	Oscillatoria nigro-viridis PCC 7112	1	1	179408
strain	Sulfuricella denitrificans skB26	1	1	1163617
strain	Tistrella mobilis KA081020-065	1	1	1110502
strain	Methanosarcina mazei Tuc01	1	1	1236903
strain	Desulfotomaculum gibsoniae DSM 7213	1	1	767817
strain	Phycisphaera mikurensis NBRC 102666	1	1	1142394
strain	Sulfurihydrogenibium azorense Az-Fu1	1	1	204536
strain	Streptococcus thermophilus JIM 8232	1	1	1051074
strain	Onion yellows phytoplasma OY-M	1	1	262768
strain	Flavobacterium johnsoniae UW101	1	1	376686
strain	Pseudomonas mendocina NK-01	1	1	1001585
strain	Herbaspirillum seropedicae SmR1	1	1	757424
strain	Neisseria meningitidis serogroup B	1	1	491
strain	Escherichia coli SMS-3-5	1	1	439855
strain	Intrasporangium calvum DSM 43043	1	1	710696
strain	Coriobacterium glomerans PW2	1	1	700015
strain	Stenotrophomonas maltophilia R551-3	1	1	391008
strain	Lactobacillus salivarius UCC118	1	1	362948
strain	Salmonella bongori N268-08	1	1	1197719
strain	Enterobacter cloacae subsp. cloacae ATCC 13047	1	1	716541
strain	Candidatus Carsonella ruddii HC isolate Thao2000	1	1	1202538
strain	Ureaplasma urealyticum serovar 10 str. ATCC 33699	1	1	565575
strain	Spiroplasma diminutum CUAS-1	1	1	1276221
strain	Streptosporangium roseum DSM 43021	1	1	479432
strain	Trichodesmium erythraeum IMS101	1	1	203124
strain	Bacillus pumilus SAFR-032	1	1	315750
strain	Lactococcus lactis subsp. lactis IO-1	1	1	1046624
strain	Brevibacillus brevis NBRC 100599	1	1	358681
strain	Candidatus Kinetoplastibacterium desouzaii TCC079E	1	1	1208919
strain	Haloquadratum walsbyi DSM 16790	1	1	362976
strain	Calditerrivibrio nitroreducens DSM 19672	1	1	768670
strain	Kocuria rhizophila DC2201	1	1	378753
strain	Brevundimonas subvibrioides ATCC 15264	1	1	633149
strain	Persephonella marina EX-H1	1	1	123214
strain	Desulfohalobium retbaense DSM 5692	1	1	485915
strain	Mycoplasma gallisepticum WI01_2001.043-13-2P	1	1	1159201
strain	Listonella anguillarum serovar O1	1	1	42323
strain	Methanococcus voltae A3	1	1	456320
strain	Candidatus Vesicomyosocius okutanii HA	1	1	412965
strain	Bacillus megaterium QM B1551	1	1	545693
strain	Oceanithermus profundus DSM 14977	1	1	670487
strain	Jonesia denitrificans DSM 20603	1	1	471856
strain	Helicobacter cinaedi ATCC BAA-847	1	1	1206745
strain	Mycobacterium tuberculosis CAS/NITR204	1	1	1310114
strain	Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)	1	1	713602
strain	Methylomonas methanica MC09	1	1	857087
strain	Shigella flexneri 2002017	1	1	591020
strain	Collimonas fungivorans Ter331	1	1	1005048
strain	Spiroplasma syrphidicola EA-1	1	1	1276229
strain	Pseudomonas fulva 12-X	1	1	743720
strain	Helicobacter pylori J99	1	1	85963
strain	Salmonella bongori NCTC 12419	1	1	218493
strain	Vibrio cholerae MJ-1236	1	1	593588
strain	Haemophilus influenzae F3031	1	1	866630
strain	Pedobacter saltans DSM 12145	1	1	762903
strain	Planctomyces brasiliensis DSM 5305	1	1	756272
strain	Klebsiella variicola At-22	1	1	640131
strain	Lactobacillus plantarum WCFS1	1	1	220668
strain	Syntrophus aciditrophicus SB	1	1	56780
strain	Corynebacterium diphtheriae HC03	1	1	698969
strain	Rhodospirillum photometricum DSM 122	1	1	1150469
strain	Escherichia coli O55:H7 str. CB9615	1	1	701177
strain	Streptococcus thermophilus ND03	1	1	767463
strain	Candidatus Carsonella ruddii DC	1	1	667013
strain	Desulfovibrio gigas DSM 1382 = ATCC 19364	1	1	1121448
strain	Streptomyces flavogriseus ATCC 33331	1	1	591167
strain	Wolbachia endosymbiont strain TRS of Brugia malayi	1	1	292805
strain	Helicobacter pylori 908	1	1	869727
strain	Agrobacterium vitis S4	1	1	311402
strain	Colwellia psychrerythraea 34H	1	1	167879
strain	Chromobacterium violaceum ATCC 12472	1	1	243365
strain	Gordonibacter pamelaeae 7-10-1-b	1	1	657308
strain	Caldisericum exile AZM16c01	1	1	511051
strain	Achromobacter xylosoxidans NH44784-1996	1	1	1167634
strain	Shigella boydii CDC 3083-94	1	1	344609
strain	Candidatus Accumulibacter phosphatis clade IIA str. UW-1	1	1	522306
strain	Escherichia coli O7:K1 str. CE10	1	1	1072459
strain	Streptococcus pneumoniae gamPNI0373	1	1	697283
strain	Streptococcus iniae SF1	1	1	1318633
strain	Tepidanaerobacter acetatoxydans Re1	1	1	1209989
strain	Escherichia coli O55:H7 str. RM12579	1	1	1048689
strain	Salmonella enterica subsp. enterica serovar Heidelberg str. B182	1	1	1160717
strain	Streptococcus pseudopneumoniae IS7493	1	1	1054460
strain	Borrelia recurrentis A1	1	1	412418
strain	Neisseria meningitidis 8013	1	1	604162
strain	Methylocella silvestris BL2	1	1	395965
strain	Clostridium difficile 2007855	1	1	699033
strain	Streptococcus parauberis KCTC 11537	1	1	936154
strain	Alkalilimnicola ehrlichii MLHE-1	1	1	187272
strain	Porphyromonas gingivalis TDC60	1	1	1030843
strain	Pseudoalteromonas haloplanktis TAC125	1	1	326442
strain	Candidatus Tremblaya phenacola PAVE	1	1	1266371
strain	Bacillus cereus NC7401	1	1	334406
strain	Halothiobacillus neapolitanus c2	1	1	555778
strain	Allochromatium vinosum DSM 180	1	1	572477
strain	Acholeplasma laidlawii PG-8A	1	1	441768
strain	Mycoplasma wenyonii str. Massachusetts	1	1	1197325
strain	Escherichia coli DH1	1	1	536056
strain	Thioalkalivibrio sulfidophilus HL-EbGr7	1	1	396588
strain	Neisseria meningitidis M04-240196	1	1	935593
strain	Streptococcus suis T15	1	1	1340847
strain	Megasphaera elsdenii DSM 20460	1	1	1064535
strain	Fibrobacter succinogenes subsp. succinogenes S85	1	1	59374
strain	Mobiluncus curtisii ATCC 43063	1	1	548479
strain	Streptococcus suis 05ZYH33	1	1	391295
strain	Dinoroseobacter shibae DFL 12 = DSM 16493	1	1	398580
strain	Escherichia coli HS	1	1	331112
strain	Mycoplasma mobile 163K	1	1	267748
strain	Acetobacter pasteurianus 386B	1	1	1266844
strain	Shewanella pealeana ATCC 700345	1	1	398579
strain	Listeria ivanovii subsp. ivanovii PAM 55	1	1	881621
strain	Mycoplasma crocodyli MP145	1	1	512564
strain	Runella slithyformis DSM 19594	1	1	761193
strain	Thermincola potens JR	1	1	635013
strain	Methylobacterium nodulans ORS 2060	1	1	460265
strain	Azospirillum brasilense Sp245	1	1	1064539
strain	Streptococcus pasteurianus ATCC 43144	1	1	981540
strain	Sphaerochaeta pleomorpha str. Grapes	1	1	158190
strain	Buchnera aphidicola str. Ua (Uroleucon ambrosiae)	1	1	1005057
strain	Staphylococcus aureus subsp. aureus MSSA476	1	1	282459
strain	Candidatus Liberibacter asiaticus str. gxpsy	1	1	1174529
strain	Vibrio vulnificus MO6-24/O	1	1	914127
strain	Bacillus cereus FRI-35	1	1	1217984
strain	Shewanella violacea DSS12	1	1	637905
strain	Geodermatophilus obscurus DSM 43160	1	1	526225
strain	Tetragenococcus halophilus NBRC 12172	1	1	945021
strain	Phenylobacterium zucineum HLK1	1	1	450851
strain	Dichelobacter nodosus VCS1703A	1	1	246195
strain	Cyclobacterium marinum DSM 745	1	1	880070
strain	Streptococcus dysgalactiae subsp. equisimilis AC-2713	1	1	759913
strain	Thioalkalivibrio nitratireducens DSM 14787	1	1	1255043
strain	Erwinia billingiae Eb661	1	1	634500
strain	Metallosphaera cuprina Ar-4	1	1	1006006
strain	Escherichia coli PMV-1	1	1	1382700
strain	Chitinophaga pinensis DSM 2588	1	1	485918
strain	Staphylococcus aureus subsp. aureus 71193	1	1	1155084
strain	Mycoplasma mycoides subsp. mycoides SC str. PG1	1	1	272632
strain	Starkeya novella DSM 506	1	1	639283
strain	Photorhabdus luminescens subsp. laumondii TTO1	1	1	243265
strain	Aquifex aeolicus VF5	1	1	224324
strain	Rhodococcus jostii RHA1	1	1	101510
strain	Staphylococcus aureus subsp. aureus TCH60	1	1	548473
strain	Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305	1	1	342451
strain	Thermotoga maritima MSB8	1	1	243274
strain	Beutenbergia cavernae DSM 12333	1	1	471853
strain	Tolumonas auensis DSM 9187	1	1	595494
strain	Pseudomonas aeruginosa PA7	1	1	381754
strain	Geobacter daltonii FRC-32	1	1	316067
strain	Pseudomonas resinovorans NBRC 106553	1	1	1245471
strain	Meiothermus ruber DSM 1279	1	1	504728
strain	Thalassolituus oleivorans MIL-1	1	1	1298593
strain	Mycoplasma hyorhinis SK76	1	1	1118964
strain	Francisella tularensis subsp. holarctica OSU18	1	1	393011
strain	Arthrobacter arilaitensis Re117	1	1	861360
strain	Lactobacillus johnsonii DPC 6026	1	1	909954
strain	Saccharomonospora viridis DSM 43017	1	1	471857
strain	Alteromonas macleodii str. 'Balearic Sea AD45'	1	1	1004787
strain	Bacillus subtilis BSn5	1	1	936156
strain	Candidatus Amoebophilus asiaticus 5a2	1	1	452471
strain	Staphylococcus aureus subsp. aureus 6850	1	1	1392476
strain	Actinoplanes friuliensis DSM 7358	1	1	1246995
strain	Magnetospirillum gryphiswaldense MSR-1 v2	1	1	1430440
strain	Cronobacter turicensis z3032	1	1	693216
strain	Enterococcus casseliflavus EC20	1	1	565655
strain	Desulfovibrio magneticus RS-1	1	1	573370
strain	Kosmotoga olearia TBF 19.5.1	1	1	521045
strain	Candidatus Hodgkinia cicadicola Dsem	1	1	573234
strain	Streptococcus pneumoniae TCH8431/19A	1	1	525381
strain	Clostridium difficile 630	1	1	272563
strain	Aerococcus urinae ACS-120-V-Col10a	1	1	866775
strain	Streptococcus pneumoniae Taiwan19F-14	1	1	487213
strain	Corynebacterium glutamicum ATCC 13032	1	1	196627
no rank	cellular organisms	652645	340	131567
no rank	ssDNA viruses	82182	0	29258
no rank	ssRNA viruses	40124	0	439488
no rank	ssRNA positive-strand viruses, no DNA stage	25061	0	35278
no rank	ssRNA negative-strand viruses	15063	0	35301
no rank	dsDNA viruses, no RNA stage	2954	1	35237
no rank	Clostridiales incertae sedis	495	0	538999
no rank	unclassified Burkholderiales	382	0	119065
no rank	unclassified Bacteria	179	0	2323
no rank	unclassified Betabaculovirus	131	0	342107
no rank	Bacillales incertae sedis	96	0	539002
no rank	unclassified Gammaproteobacteria	38	0	118884
no rank	unclassified Betaproteobacteria	20	0	119066
no rank	environmental samples	16	0	99260
no rank	uncultured Termite group 1 bacterium phylotype Rs-D17	16	16	471821
no rank	sulfur-oxidizing symbionts	10	9	32036
no rank	Enterobacteria phage G4 clade	7	0	374842
no rank	unclassified Mononegavirales	5	0	644608
no rank	Candidatus Baumannia	5	0	198346
no rank	unclassified Clostridiales	4	0	186813
no rank	unclassified Alphaproteobacteria	2	0	82117
no rank	unclassified Micrococcineae	2	0	577468
no rank	unclassified Enterobacteria phage G4 clade	2	0	512009
no rank	unclassified Siphoviridae	1	1	196894
no rank	unclassified Bacteroidetes	1	0	171558
no rank	Alteromonadales genera incertae sedis	1	0	256005
no rank	unclassified Rhizobiales	1	0	119042
no rank	unclassified Deltaproteobacteria	1	0	45456
no rank	unclassified Nucleopolyhedrovirus	1	0	328432
no rank	unclassified Gammaproteobacteria (miscellaneous)	1	0	33811
no rank	Thermobaculum terrenum ATCC BAA-798	1	1	525904
unclassified	unclassified	1796785	1796785	0
