LEVEL	TAXA	ROLLUP	ASSIGNED	TAXID
	Actinobacteridae	4914	8	85003
	Coriobacterineae	90	0	255727
	Actinomycineae	13	0	85005
	Albidiferax	4	0	885497
	Nudivirus	3	0	483372
	Methanobacterium sp. AL-21	3	3	868132
	Clostridiales genomosp. BVAB3	3	0	699245
	Mobiluncus/Falcivibrio group	2	0	279916
root	root	805160	23516	1
superkingdom	Bacteria	733167	3588	2
superkingdom	Viruses	47000	0	10239
superkingdom	Archaea	1157	0	2157
superphylum	Bacteroidetes/Chlorobi group	1689	0	68336
superphylum	Chlamydiae/Verrucomicrobia group	28	0	51290
superphylum	Fibrobacteres/Acidobacteria group	1	0	131550
phylum	Proteobacteria	700768	1286	1224
phylum	Firmicutes	17763	101	1239
phylum	Actinobacteria	5009	0	201174
phylum	Tenericutes	3549	0	544448
phylum	Bacteroidetes	1680	11	976
phylum	Euryarchaeota	922	114	28890
phylum	Fusobacteria	353	0	32066
phylum	Crenarchaeota	235	0	28889
phylum	Spirochaetes	184	0	203691
phylum	Cyanobacteria	165	61	1117
phylum	Thermodesulfobacteria	51	0	200940
phylum	Chlamydiae	28	0	204428
phylum	Synergistetes	8	0	508458
phylum	Chlorobi	7	0	1090
phylum	Chloroflexi	3	0	200795
phylum	Candidatus Saccharibacteria	2	0	95818
phylum	Ignavibacteriae	2	0	1134404
phylum	Thermotogae	2	0	200918
phylum	Planctomycetes	2	0	203682
phylum	Acidobacteria	1	0	57723
phylum	Aquificae	1	0	200783
phylum	Deinococcus-Thermus	1	0	1297
subphylum	delta/epsilon subdivisions	427	0	68525
class	Betaproteobacteria	627942	161	28216
class	Gammaproteobacteria	70851	220	1236
class	Bacilli	17080	29	91061
class	Actinobacteria	5009	3	1760
class	Mollicutes	3549	1	31969
class	Bacteroidia	1588	0	200643
class	Methanococci	612	0	183939
class	Fusobacteriia	353	0	203490
class	Negativicutes	298	0	909932
class	Clostridia	284	11	186801
class	Alphaproteobacteria	262	9	28211
class	Epsilonproteobacteria	242	0	29547
class	Thermoprotei	235	0	183924
class	Deltaproteobacteria	185	1	28221
class	Spirochaetia	184	0	203692
class	Methanomicrobia	107	0	224756
class	Coriobacteridae	90	0	84998
class	Halobacteria	74	0	183963
class	Flavobacteriia	69	0	117743
class	Thermodesulfobacteria	51	0	67799
class	Chlamydiia	28	0	204429
class	Methanobacteria	15	0	183925
class	Synergistia	8	0	649775
class	Chlorobia	7	0	191410
class	Cytophagia	5	0	768503
class	Sphingobacteriia	4	0	117747
class	Rubrobacteridae	2	0	84995
class	Thermotogae	2	0	188708
class	Ignavibacteria	2	0	795747
class	Chloroflexi	2	0	32061
class	Acidobacteriia	1	0	204432
class	Deinococci	1	0	188787
class	Aquificae	1	0	187857
class	Planctomycetia	1	0	203683
class	Phycisphaerae	1	0	666505
class	Thermomicrobia	1	0	189775
subclass	Oscillatoriophycideae	78	0	1301283
subclass	Sphaerobacteridae	1	0	85000
order	Burkholderiales	622954	126	80840
order	Pseudomonadales	35363	1	72274
order	Enterobacteriales	15852	0	91347
order	Lactobacillales	13590	46	186826
order	Pasteurellales	13572	0	135625
order	Xanthomonadales	5562	0	135614
order	Actinomycetales	4802	144	2037
order	Neisseriales	4760	0	206351
order	Mycoplasmatales	3542	0	2085
order	Bacillales	3461	5	1385
order	Micrococcineae	2311	6	85006
order	Corynebacterineae	2203	37	85007
order	Bacteroidales	1588	57	171549
order	Herpesvirales	1472	0	548681
order	Methanococcales	612	0	2182
order	Fusobacteriales	353	1	203491
order	Selenomonadales	298	0	909929
order	Campylobacterales	242	0	213849
order	Sulfolobales	221	0	2281
order	Spirochaetales	184	0	136
order	Caudovirales	167	0	28883
order	Rhizobiales	159	1	356
order	Aeromonadales	149	0	135624
order	Thermoanaerobacterales	144	0	68295
order	Desulfovibrionales	130	0	213115
order	Clostridiales	129	5	186802
order	Bifidobacteriales	104	0	85004
order	Methanosarcinales	102	0	94695
order	Coriobacteriales	90	0	84999
order	Halobacteriales	74	0	2235
order	Flavobacteriales	69	0	200644
order	Oscillatoriales	64	0	1150
order	Propionibacterineae	53	0	85009
order	Alteromonadales	52	0	135622
order	Thermodesulfobacteriales	51	0	188710
order	Myxococcales	47	1	29
order	Rhodocyclales	36	0	206389
order	Streptomycineae	35	0	85011
order	Rickettsiales	33	0	766
order	Chlamydiales	28	0	51291
order	Nidovirales	27	0	76804
order	Rhodospirillales	23	0	204441
order	Oceanospirillales	23	0	135619
order	Nostocales	19	0	1161
order	Rhodobacterales	16	0	204455
order	Methanobacteriales	15	0	2158
order	Chroococcales	14	0	1118
order	Desulfurococcales	14	0	114380
order	Frankineae	13	1	85013
order	Mononegavirales	12	0	11157
order	Sphingomonadales	10	0	204457
order	Micromonosporineae	10	0	85008
order	Synergistales	8	0	649776
order	Pseudonocardineae	8	0	85010
order	Gallionellales	8	0	713636
order	Streptosporangineae	7	0	85012
order	Chlorobiales	7	0	191411
order	Prochlorales	7	0	1212
order	Caulobacterales	7	0	204458
order	Hydrogenophilales	6	0	119069
order	Nitrosomonadales	6	0	32003
order	Cytophagales	5	0	768507
order	Sphingobacteriales	4	0	200666
order	Vibrionales	4	0	135623
order	Acholeplasmatales	4	0	186329
order	Legionellales	3	0	118969
order	Thiotrichales	3	0	72273
order	Chromatiales	3	0	135613
order	Desulfuromonadales	3	0	69541
order	Methanocellales	3	0	570264
order	Catenulisporineae	3	0	414714
order	Desulfobacterales	3	0	213118
order	Acidithiobacillales	3	0	225057
order	Methanomicrobiales	2	0	2191
order	Solirubrobacterales	2	0	588673
order	Thermotogales	2	0	2419
order	Chloroflexales	2	0	32064
order	Methylococcales	2	0	135618
order	SAR11 cluster	2	0	54526
order	Entomoplasmatales	2	0	186328
order	Methylophilales	2	0	206350
order	Ignavibacteriales	2	0	795748
order	Phycisphaerales	1	0	666506
order	Deinococcales	1	0	118964
order	Acidobacteriales	1	0	204433
order	Aquificales	1	0	32069
order	Kineosporiineae	1	0	622452
order	Bdellovibrionales	1	0	213481
order	Sphaerobacterales	1	0	85001
order	Glycomycineae	1	0	85014
order	Planctomycetales	1	0	112
suborder	Nannocystineae	32	0	224462
suborder	Sorangiineae	10	0	80812
suborder	Cystobacterineae	4	0	80811
suborder	Sphaerobacterineae	1	0	255728
family	Alcaligenaceae	620442	11	506
family	Microviridae	43191	0	10841
family	Pseudomonadaceae	22724	14	135621
family	Enterobacteriaceae	15852	1500	543
family	Pasteurellaceae	13572	151	712
family	Moraxellaceae	12638	74	468
family	Streptococcaceae	9522	2	1300
family	Xanthomonadaceae	5562	84	32033
family	Neisseriaceae	4760	32	481
family	Mycoplasmataceae	3542	0	2092
family	Lactobacillaceae	3303	3	33958
family	Staphylococcaceae	2370	7	90964
family	Micrococcaceae	2249	4	1268
family	Corynebacteriaceae	2114	0	1653
family	Burkholderiaceae	1581	22	119060
family	Prevotellaceae	1309	0	171552
family	Herpesviridae	1183	4	10292
family	Polydnaviridae	966	353	10482
family	Bacillaceae	873	1	186817
family	Baculoviridae	713	0	10442
family	Enterococcaceae	710	1	81852
family	Methanococcaceae	612	1	2183
family	Comamonadaceae	520	30	80864
family	Fusobacteriaceae	340	0	203492
family	Veillonellaceae	298	0	31977
family	Alloherpesviridae	289	0	548682
family	Poxviridae	272	0	10240
family	Oxalobacteraceae	271	52	75682
family	Sulfolobaceae	221	0	118883
family	Helicobacteraceae	190	0	72293
family	Spirochaetaceae	177	0	137
family	Aeromonadaceae	149	0	84642
family	Desulfovibrionaceae	130	0	194924
family	Thermoanaerobacteraceae	112	0	186814
family	Rhizobiaceae	110	1	82115
family	Bacteroidaceae	109	0	815
family	Bifidobacteriaceae	104	0	31953
family	Methanosarcinaceae	102	0	2206
family	Porphyromonadaceae	100	4	171551
family	Phycodnaviridae	100	0	10501
family	Coriobacteriaceae	90	0	84107
family	Paenibacillaceae	80	0	186822
family	Podoviridae	78	0	10744
family	Halobacteriaceae	74	0	2236
family	Planococcaceae	73	0	186818
family	Peptostreptococcaceae	54	0	186804
family	Listeriaceae	53	0	186820
family	Propionibacteriaceae	52	0	31957
family	Thermodesulfobacteriaceae	51	0	188711
family	Campylobacteraceae	51	0	72294
family	Flavobacteriaceae	46	2	49546
family	Myoviridae	45	0	10662
family	Siphoviridae	44	1	10699
family	Rhodocyclaceae	36	1	75787
family	Streptomycetaceae	35	0	2062
family	Psychromonadaceae	34	0	267894
family	Rickettsiaceae	33	0	775
family	Kofleriaceae	32	0	224464
family	Thermoanaerobacterales Family III. Incertae Sedis	30	0	543371
family	Coronaviridae	27	0	11118
family	Mycobacteriaceae	26	0	1762
family	Iridoviridae	25	0	10486
family	Clostridiales Family XI. Incertae Sedis	24	0	543310
family	Rhodospirillaceae	22	1	41295
family	Lachnospiraceae	21	0	186803
family	Nocardiaceae	21	0	85025
family	Parachlamydiaceae	21	0	92713
family	Bradyrhizobiaceae	19	1	41294
family	Nostocaceae	18	0	1162
family	Ascoviridae	17	0	43682
family	Rhodobacteraceae	16	1	31989
family	Methylobacteriaceae	15	0	119045
family	Methanobacteriaceae	15	0	2159
family	Pyrodictiaceae	14	0	2307
family	Actinomycetaceae	13	0	2049
family	Halomonadaceae	13	0	28256
family	Leptotrichiaceae	12	0	1129771
family	Clostridiaceae	11	0	31979
family	Polyangiaceae	10	0	49
family	Micromonosporaceae	10	1	28056
family	Sphingomonadaceae	10	0	41297
family	Dermacoccaceae	9	0	145357
family	Rikenellaceae	9	0	171550
family	Shewanellaceae	8	0	267890
family	Anelloviridae	8	0	687329
family	Gallionellaceae	8	0	90627
family	Paramyxoviridae	8	0	11158
family	Pseudonocardiaceae	8	0	2070
family	Cellulomonadaceae	8	0	85016
family	Synergistaceae	8	0	649777
family	Chlorobiaceae	7	0	191412
family	Prochlorococcaceae	7	0	1217
family	Adenoviridae	7	0	10508
family	Frankiaceae	7	0	74712
family	Caulobacteraceae	7	0	76892
family	Chlamydiaceae	7	0	809
family	Alcanivoracaceae	7	0	224372
family	Pseudoalteromonadaceae	6	0	267888
family	Microbacteriaceae	6	0	85023
family	Hydrogenophilaceae	6	0	206349
family	Nitrosomonadaceae	6	0	206379
family	Brachyspiraceae	5	0	143786
family	Nocardiopsaceae	5	2	83676
family	Tsukamurellaceae	5	0	85028
family	Vibrionaceae	4	0	641
family	Acholeplasmataceae	4	0	2146
family	Beutenbergiaceae	4	0	125316
family	Alteromonadaceae	4	0	72275
family	Leuconostocaceae	4	0	81850
family	Cystobacteraceae	4	0	39
family	Blattabacteriaceae	4	0	39782
family	Ruminococcaceae	4	0	541000
family	Geodermatophilaceae	4	0	85030
family	Beijerinckiaceae	4	0	45404
family	Alicyclobacillaceae	4	0	186823
family	Methanocellaceae	3	0	570265
family	Geobacteraceae	3	0	213422
family	Retroviridae	3	0	11632
family	Cytophagaceae	3	0	89373
family	Francisellaceae	3	0	34064
family	Aerococcaceae	3	0	186827
family	Catenulisporaceae	3	0	414877
family	Acidithiobacillaceae	3	0	225058
family	Promicromonosporaceae	3	0	85017
family	Eubacteriaceae	3	0	186806
family	Rhodobiaceae	3	0	119043
family	Sphingobacteriaceae	3	0	84566
family	Dermabacteraceae	2	0	85020
family	Flammeovirgaceae	2	0	200667
family	Spiroplasmataceae	2	0	2131
family	Thermotogaceae	2	0	188709
family	Coxiellaceae	2	0	118968
family	Nimaviridae	2	0	196937
family	Methanomicrobiaceae	2	0	2194
family	Methylophilaceae	2	0	32011
family	Leptospiraceae	2	0	170
family	Peptococcaceae	2	0	186807
family	Desulfobulbaceae	2	0	213121
family	Carnobacteriaceae	2	0	186828
family	Phyllobacteriaceae	2	0	69277
family	Ectothiorhodospiraceae	2	0	72276
family	Thermomonosporaceae	2	0	2012
family	Hyphomicrobiaceae	2	0	45401
family	Orthomyxoviridae	2	0	11308
family	Thermoanaerobacterales Family IV. Incertae Sedis	2	0	543372
family	Oceanospirillaceae	2	0	135620
family	Conexibacteraceae	2	0	320583
family	Ignavibacteriaceae	2	0	795749
family	Chloroflexaceae	2	0	1106
family	Oscillospiraceae	2	0	216572
family	Methylococcaceae	2	0	403
family	Potyviridae	1	0	39729
family	Glycomycetaceae	1	0	85034
family	Legionellaceae	1	0	444
family	Nocardioidaceae	1	0	85015
family	Kineosporiaceae	1	0	83778
family	Bartonellaceae	1	0	772
family	Hahellaceae	1	0	224379
family	Jonesiaceae	1	0	85022
family	Desulfobacteraceae	1	0	213119
family	Chitinophagaceae	1	0	563835
family	Planctomycetaceae	1	0	126
family	Deinococcaceae	1	0	183710
family	Sanguibacteraceae	1	0	145360
family	Chromatiaceae	1	0	1046
family	Hytrosaviridae	1	0	1285590
family	Acetobacteraceae	1	0	433
family	Acidobacteriaceae	1	0	204434
family	Nakamurellaceae	1	0	85031
family	Bdellovibrionaceae	1	0	213483
family	Phycisphaeraceae	1	0	666507
family	Aquificaceae	1	0	64898
family	Sphaerobacteraceae	1	0	85002
family	Rivulariaceae	1	0	1185
subfamily	Alphaherpesvirinae	1110	0	10293
subfamily	Chordopoxvirinae	271	0	10241
subfamily	Autographivirinae	72	0	542835
subfamily	Betaherpesvirinae	54	0	10357
subfamily	Coronavirinae	27	0	693995
subfamily	Gammaherpesvirinae	15	0	10374
subfamily	Peduovirinae	13	0	857479
subfamily	Spounavirinae	13	0	857473
subfamily	Paramyxovirinae	8	0	11159
subfamily	Azotobacter group	3	0	351
subfamily	Orthoretrovirinae	3	0	327045
subfamily	Entomopoxvirinae	1	0	10284
tribe	Rickettsieae	33	0	33988
genus	Achromobacter	620368	0	222
genus	Microvirus	43191	47	10842
genus	Pseudomonas	22705	982	286
genus	Haemophilus	13213	39	724
genus	Streptococcus	9516	1508	1301
genus	Moraxella	6984	0	475
genus	Klebsiella	5867	401	570
genus	Acinetobacter	5577	87	469
genus	Stenotrophomonas	5394	0	40323
genus	Neisseria	4702	1334	482
genus	Mycoplasma	3541	17	2093
genus	Lactobacillus	3300	80	1578
genus	Escherichia	2804	65	561
genus	Serratia	2622	53	613
genus	Staphylococcus	2361	78	1279
genus	Rothia	2227	11	32207
genus	Corynebacterium	2114	433	1716
genus	Enterobacter	1681	29	547
genus	Burkholderia	1457	83	32008
genus	Prevotella	1309	43	838
genus	Simplexvirus	1102	7	10294
genus	Bacillus	846	0	1386
genus	Enterococcus	709	269	1350
genus	Alphabaculovirus	616	0	558016
genus	Methanococcus	606	28	2184
genus	Proteus	601	0	583
genus	Ichnovirus	563	4	10483
genus	Delftia	347	133	80865
genus	Morganella	346	0	581
genus	Fusobacterium	337	0	848
genus	Ictalurivirus	281	0	172653
genus	Veillonella	272	0	29465
genus	Orthopoxvirus	259	96	10242
genus	Sulfolobus	221	0	2284
genus	Helicobacter	190	0	209
genus	Aeromonas	149	0	642
genus	Lawsonia	125	0	41707
genus	Bacteroides	109	14	816
genus	Bifidobacterium	98	4	1678
genus	Betabaculovirus	95	0	558017
genus	Borrelia	91	1	138
genus	Aggregatibacter	88	2	416916
genus	Treponema	86	6	157
genus	Histophilus	83	0	214906
genus	Providencia	81	0	586
genus	Phaeovirus	81	0	181085
genus	Paenibacillus	80	0	44249
genus	Atopobium	78	0	1380
genus	Solibacillus	73	0	648800
genus	T7likevirus	72	0	110456
genus	Collimonas	72	0	202907
genus	Caldanaerobacter	63	0	249529
genus	Herbaspirillum	61	0	963
genus	Buchnera	61	0	32199
genus	Candidatus Liberibacter	59	0	34019
genus	Salmonella	57	2	590
genus	Methanomethylovorans	56	0	101191
genus	Bordetella	54	29	517
genus	Janthinobacterium	54	0	29580
genus	Listeria	53	0	1637
genus	Propionibacterium	51	2	1743
genus	Thermodesulfobacterium	51	0	1740
genus	Campylobacter	51	2	194
genus	Ralstonia	50	0	48736
genus	Bracovirus	50	0	10485
genus	Porphyromonas	49	2	836
genus	Xanthomonas	47	11	338
genus	Salinarchaeum	47	0	1269201
genus	Thermoanaerobacter	46	3	1754
genus	Filifactor	45	0	44259
genus	Verminephrobacter	44	0	364316
genus	Tannerella	44	0	195950
genus	Cupriavidus	42	15	106589
genus	Candidatus Carsonella	37	0	114185
genus	Cronobacter	35	1	413496
genus	Streptomyces	35	12	1883
genus	Psychromonas	34	0	67572
genus	Muromegalovirus	33	0	10365
genus	Trichodesmium	33	0	1205
genus	Rickettsia	33	0	780
genus	Citrobacter	33	0	544
genus	Rhizobium	33	1	379
genus	Haliangium	32	0	162027
genus	Methanosarcina	32	2	2207
genus	Shigella	31	1	620
genus	Yersinia	30	2	629
genus	Caldicellulosiruptor	29	0	44000
genus	Dickeya	27	0	204037
genus	Alphacoronavirus	27	0	693996
genus	Acidovorax	26	7	12916
genus	Capnocytophaga	26	0	1016
genus	Selenomonas	25	0	970
genus	Oscillatoria	25	0	1158
genus	Herminiimonas	24	0	303379
genus	Ranavirus	24	0	10492
genus	Geobacillus	24	0	129337
genus	Mycobacterium	23	6	1763
genus	Tropheryma	22	0	2038
genus	Parachlamydia	21	0	83551
genus	Finegoldia	20	0	150022
genus	Candidatus Sulcia	19	0	336809
genus	Pseudoxanthomonas	19	0	83618
genus	Ascovirus	17	0	43680
genus	Alicycliphilus	17	0	201096
genus	Coccolithovirus	17	0	346673
genus	Roseburia	16	2	841
genus	Actinobacillus	16	7	713
genus	Polaromonas	16	0	52972
genus	Variovorax	16	0	34072
genus	Arthrobacter	15	6	1663
genus	Methylobacterium	15	0	407
genus	Sodalis	14	0	84565
genus	Pyrolobus	14	0	54251
genus	Xylella	14	0	2370
genus	Spounalikevirus	13	0	140409
genus	Nocardia	13	0	1817
genus	Methanobrevibacter	12	0	2172
genus	Erwinia	12	1	551
genus	Molluscipoxvirus	11	0	10278
genus	Chromobacterium	11	0	535
genus	Anabaena	11	0	1163
genus	Arcanobacterium	11	0	28263
genus	Laribacter	11	0	168470
genus	Mannheimia	11	0	75984
genus	Ramlibacter	10	0	174951
genus	Sinorhizobium	10	2	28105
genus	Leptotrichia	10	0	32067
genus	Sorangium	10	0	39643
genus	Candidatus Portiera	10	0	235572
genus	Comamonas	10	0	283
genus	Natronococcus	10	0	29287
genus	Phikzlikevirus	10	0	680115
genus	Dechloromonas	10	0	73029
genus	Azospira	10	0	146937
genus	Lambdalikevirus	9	0	186765
genus	Alistipes	9	0	239759
genus	Kytococcus	9	0	57499
genus	Azoarcus	9	0	12960
genus	Lymphocryptovirus	9	0	10375
genus	Rhodospirillum	9	0	1081
genus	Pandoraea	9	6	93217
genus	Candidatus Endolissoclinum	9	0	1263978
genus	Candidatus Zinderia	8	0	884214
genus	Clostridium	8	0	1485
genus	Fretibacterium	8	0	1434006
genus	Shewanella	8	0	22
genus	Cellulomonas	8	5	1707
genus	Respirovirus	8	0	186938
genus	Pantoea	8	0	53335
genus	Roseolovirus	8	0	40272
genus	Edwardsiella	8	2	635
genus	Alphatorquevirus	8	4	687331
genus	Natrialba	8	0	63742
genus	Methanolobus	8	0	2220
genus	Rhodococcus	8	2	1827
genus	Cyprinivirus	8	0	692606
genus	Actinoplanes	7	0	1865
genus	Prochlorococcus	7	0	1218
genus	Frankia	7	0	1854
genus	Bradyrhizobium	7	3	374
genus	Chlamydia	7	0	810
genus	Cellulophaga	7	0	104264
genus	Advenella	7	0	290425
genus	P2likevirus	7	0	140410
genus	Mastadenovirus	7	0	10509
genus	Sulfuricella	6	0	935200
genus	Sideroxydans	6	0	314343
genus	Pasteurella	6	0	745
genus	Caulobacter	6	0	75
genus	Methanococcoides	6	0	2225
genus	Rhodopseudomonas	6	0	1073
genus	Thauera	6	0	33057
genus	Nitrosomonas	6	0	914
genus	Candidatus Accumulibacter	6	0	327159
genus	Gardnerella	6	0	2701
genus	Pseudoalteromonas	6	0	53246
genus	Pectobacterium	6	0	122277
genus	Hpunalikevirus	6	0	1196844
genus	Microbacterium	6	0	33882
genus	Mardivirus	6	0	180252
genus	Zymomonas	6	0	541
genus	Cryptobacterium	6	0	84162
genus	Alcanivorax	5	0	59753
genus	Tsukamurella	5	0	2060
genus	Leisingera	5	0	191028
genus	Methanothermococcus	5	0	155862
genus	Olsenella	5	0	133925
genus	Agrobacterium	5	2	357
genus	Synechococcus	5	0	1129
genus	Pelodictyon	5	0	1099
genus	Leptothrix	5	0	88
genus	Punalikevirus	5	0	186789
genus	Brachyspira	5	0	29521
genus	Desulfovibrio	5	0	872
genus	Blattabacterium	4	0	34098
genus	Raoultella	4	0	160674
genus	Arthrospira	4	0	35823
genus	Leuconostoc	4	2	1243
genus	Pseudogulbenkiania	4	0	568394
genus	Beijerinckia	4	0	532
genus	Stigmatella	4	0	40
genus	Vibrio	4	0	662
genus	Lactococcus	4	0	1357
genus	Candidatus Phytoplasma	4	1	33926
genus	Coprococcus	4	0	33042
genus	Candidatus Azobacteroides	4	0	511434
genus	Anaerococcus	4	0	165779
genus	Bibersteinia	4	0	476528
genus	Geodermatophilus	4	0	1860
genus	Beutenbergia	4	0	84756
genus	Paracoccus	4	0	265
genus	Rhodanobacter	4	0	75309
genus	Halovivax	4	0	332951
genus	Nitrobacter	4	0	911
genus	Saccharothrix	4	0	2071
genus	Alicyclobacillus	4	0	29330
genus	Francisella	3	0	262
genus	Psychrobacter	3	3	497
genus	Pedobacter	3	0	84567
genus	Rubrivivax	3	0	28067
genus	Shimwellia	3	0	1335483
genus	Nostoc	3	0	1177
genus	Candidatus Cardinium	3	0	273135
genus	Exiguobacterium	3	0	33986
genus	Parvibaculum	3	0	256616
genus	Aerococcus	3	0	1375
genus	Photorhabdus	3	0	29487
genus	Amycolicicoccus	3	0	992401
genus	Nocardiopsis	3	0	2013
genus	Odoribacter	3	0	283168
genus	Methanobacterium	3	0	2160
genus	Methanocella	3	0	570266
genus	Ruegeria	3	0	97050
genus	Haloferax	3	0	2251
genus	Candidatus Hamiltonella	3	0	568987
genus	Polaribacter	3	0	52959
genus	Chamaesiphon	3	0	217161
genus	Ilyobacter	3	0	167639
genus	Halomonas	3	0	2745
genus	Eubacterium	3	0	1730
genus	Gammaretrovirus	3	0	153135
genus	Rhodobacter	3	0	1060
genus	Geobacter	3	0	28231
genus	Thermacetogenium	3	0	140458
genus	Macavirus	3	0	548687
genus	Microcystis	3	0	1125
genus	Azotobacter	3	0	352
genus	Acidithiobacillus	3	0	119977
genus	Catenulispora	3	0	414878
genus	Kangiella	2	0	261963
genus	Riemerella	2	0	34084
genus	Haloquadratum	2	0	293431
genus	Brachybacterium	2	0	43668
genus	Sphingobium	2	0	165695
genus	Candidatus Saccharimonas	2	0	1331051
genus	Pusillimonas	2	0	305976
genus	Methanoculleus	2	0	45989
genus	Lysinibacillus	2	0	400634
genus	Varicellovirus	2	0	10319
genus	Roseiflexus	2	0	120961
genus	Glaciecola	2	0	89404
genus	Ignavibacterium	2	0	795750
genus	Influenzavirus A	2	0	197911
genus	Chlorobaculum	2	0	256319
genus	Oscillibacter	2	0	459786
genus	Amycolatopsis	2	0	1813
genus	Rahnella	2	1	34037
genus	Azospirillum	2	0	191
genus	Deltabaculovirus	2	0	558019
genus	Mesotoga	2	0	1184396
genus	Crinalium	2	0	241421
genus	Whispovirus	2	0	249585
genus	Cylindrospermum	2	0	56106
genus	Chlorovirus	2	1	181083
genus	Zobellia	2	0	112040
genus	Trichormus	2	0	264688
genus	Percavirus	2	0	548688
genus	Desulfotomaculum	2	0	1562
genus	Mahella	2	0	252965
genus	Macrococcus	2	0	69965
genus	Ruminococcus	2	0	1263
genus	Faecalibacterium	2	0	216851
genus	Mobiluncus	2	0	2050
genus	Hyphomicrobium	2	0	81
genus	Thiomonas	2	0	32012
genus	Marinobacter	2	0	2742
genus	Cytomegalovirus	2	0	10358
genus	Marinomonas	2	2	28253
genus	Conexibacter	2	0	191494
genus	Gallionella	2	0	96
genus	Carnobacterium	2	0	2747
genus	Spiroplasma	2	0	2132
genus	Coxiella	2	0	776
genus	Micavibrio	2	0	213485
genus	Sphingomonas	2	0	13687
genus	Thermomonospora	2	0	2019
genus	Cellvibrio	2	0	10
genus	Candidatus Nasuia	2	0	1301080
genus	Weeksella	2	0	1013
genus	Methylovorus	2	2	81682
genus	Candidatus Hodgkinia	2	0	573657
genus	Methylibium	2	0	316612
genus	Candidatus Moranella	2	0	1048757
genus	Alkaliphilus	2	0	114627
genus	Marivirga	2	0	869806
genus	Desulfobulbus	2	0	893
genus	Xylanimonas	2	0	186188
genus	Leptospira	2	0	171
genus	Komagataeibacter	1	0	1434011
genus	Methylomonas	1	0	416
genus	Micrococcus	1	0	1269
genus	Renibacterium	1	0	1645
genus	Sphaerobacter	1	0	2056
genus	Thiocystis	1	0	13724
genus	Kineococcus	1	0	33981
genus	Rhadinovirus	1	0	10379
genus	Glossinavirus	1	0	1285591
genus	Kribbella	1	0	182639
genus	Candidatus Pelagibacter	1	0	198251
genus	Jonesia	1	0	43673
genus	Methylomicrobium	1	0	39773
genus	Capripoxvirus	1	0	10265
genus	Stackebrandtia	1	0	283810
genus	Cyanobium	1	0	167375
genus	Megamonas	1	0	158846
genus	Desulfococcus	1	0	896
genus	Fibrella	1	0	861914
genus	Streptobacillus	1	0	34104
genus	Pseudonocardia	1	0	1847
genus	Thermoanaerobacterium	1	0	28895
genus	Terriglobus	1	0	392733
genus	Ornithobacterium	1	0	28250
genus	Magnetospirillum	1	0	13134
genus	Hahella	1	0	158481
genus	Chelativorans	1	0	449972
genus	Leadbetterella	1	0	319458
genus	Hydrogenobaculum	1	0	168657
genus	Planctomyces	1	0	118
genus	Isoptericola	1	0	254250
genus	Legionella	1	0	445
genus	Rivularia	1	0	373984
genus	Eggerthella	1	0	84111
genus	Cyanothece	1	0	43988
genus	Sebaldella	1	0	32068
genus	Chitinophaga	1	0	79328
genus	Candidatus Arthromitus	1	0	49082
genus	Polymorphum	1	0	991903
genus	Saccharopolyspora	1	0	1835
genus	Micromonospora	1	0	1873
genus	Cyanobacterium	1	0	102234
genus	Mesorhizobium	1	0	68287
genus	Ureaplasma	1	0	2129
genus	Nakamurella	1	0	53460
genus	Bartonella	1	0	773
genus	Butyrivibrio	1	0	830
genus	Phycisphaera	1	0	666508
genus	Thioalkalivibrio	1	0	106633
genus	Polynucleobacter	1	0	44013
genus	Flavobacterium	1	0	237
genus	Iridovirus	1	0	10487
genus	Bdellovibrio	1	0	958
genus	Nitratifractor	1	0	269260
genus	Salinispora	1	0	168694
genus	Oligotropha	1	0	40136
genus	Kinetoplastibacterium	1	1	33055
genus	Sanguibacter	1	0	60919
genus	Deinococcus	1	0	1298
genus	Betaentomopoxvirus	1	0	10286
genus	Kocuria	1	0	57493
genus	Halorhodospira	1	0	85108
genus	Asticcacaulis	1	0	76890
genus	Potyvirus	1	0	12195
genus	Dyadobacter	1	0	120831
genus	Microlunatus	1	0	29404
subgenus	Branhamella	6984	0	46226
species group	Pseudomonas aeruginosa group	18329	27	136841
species group	Acinetobacter calcoaceticus/baumannii complex	5486	59	909768
species group	Pseudomonas fluorescens group	2525	210	136843
species group	Enterobacter cloacae complex	1608	65	354276
species group	Bacillus cereus group	820	0	86661
species group	pseudomallei group	675	4	111527
species group	Burkholderia cepacia complex	641	137	87882
species group	Streptococcus anginosus group	350	56	671232
species group	Pseudomonas putida group	217	27	136845
species group	Pseudomonas syringae group	72	4	136849
species group	Lactobacillus casei group	70	41	655183
species group	Pseudomonas stutzeri group	46	0	136846
species group	spotted fever group	33	0	114277
species group	Borrelia burgdorferi group	32	0	64895
species group	Streptococcus dysgalactiae group	24	1	119603
species group	Bacillus subtilis group	9	0	653685
species group	Pseudomonas pertucinogena group	8	0	136844
species group	Methylobacterium extorquens group	5	0	578822
species group	Mycoplasma mycoides group	3	0	656088
species group	Mycobacterium tuberculosis complex	3	1	77643
species group	Agrobacterium tumefaciens complex	2	0	1183400
species group	Candidatus Phytoplasma asteris	2	0	85620
species group	Mycobacterium chelonae group	2	0	670516
species group	Mycobacterium avium complex (MAC)	2	0	120793
species group	Vibrio harveyi group	2	0	717610
species group	16SrX (Apple proliferation group)	1	0	85630
species subgroup	Pseudomonas stutzeri subgroup	46	0	578833
species subgroup	Pseudomonas syringae group genomosp. 2	45	0	251698
species subgroup	Pseudomonas syringae group genomosp. 1	14	0	251695
species subgroup	Mycobacterium abscessus subgroup	2	0	670506
species	Achromobacter xylosoxidans	620368	682	85698
species	Enterobacteria phage phiX174 sensu lato	43139	43139	374840
species	Pseudomonas aeruginosa	18261	15097	287
species	Haemophilus influenzae	12447	8516	727
species	Moraxella catarrhalis	6984	0	480
species	Klebsiella pneumoniae	5426	4640	573
species	Acinetobacter baumannii	5416	5134	470
species	Stenotrophomonas maltophilia	5394	1603	40324
species	Mycoplasma hyopneumoniae	3154	99	2099
species	Escherichia coli	2731	2290	562
species	Serratia marcescens	2513	24	615
species	Lactobacillus rhamnosus	2313	1377	47715
species	Streptococcus parasanguinis	2198	869	1318
species	Neisseria meningitidis	2110	1467	487
species	Rothia mucilaginosa	2082	0	43675
species	Pseudomonas fluorescens	2054	164	294
species	Staphylococcus aureus	1812	1677	1280
species	Enterobacter cloacae	1501	150	550
species	Human herpesvirus 1	1081	1081	10298
species	Streptococcus agalactiae	1032	944	1311
species	Prevotella melaninogenica	977	0	28132
species	Streptococcus salivarius	862	345	1304
species	Bacillus thuringiensis	769	0	1428
species	Neisseria gonorrhoeae	736	326	485
species	Haemophilus parainfluenzae	713	0	729
species	Corynebacterium aurimucosum	702	0	169292
species	Streptococcus pneumoniae	681	527	1313
species	Streptococcus suis	664	10	1307
species	Burkholderia mallei	654	589	13373
species	Streptococcus mitis	612	0	28037
species	Proteus mirabilis	601	251	584
species	Maruca vitrata nucleopolyhedrovirus	580	580	1307954
species	Streptococcus oralis	528	0	1303
species	Neisseria lactamica	522	0	486
species	Methanococcus vannielii	505	0	2187
species	Lactobacillus fermentum	501	396	1613
species	Corynebacterium diphtheriae	470	316	1717
species	Staphylococcus epidermidis	458	325	1282
species	Enterococcus faecalis	420	215	1351
species	Pseudomonas sp. TKP	403	403	1415630
species	Burkholderia cenocepacia	395	227	95486
species	Glypta fumiferanae ichnovirus	359	359	419435
species	Morganella morganii	346	0	582
species	Fusobacterium nucleatum	337	37	851
species	Streptococcus pseudopneumoniae	299	0	257758
species	Ictalurid herpesvirus 1	281	281	10401
species	Veillonella parvula	272	0	29466
species	Mycoplasma hyorhinis	242	73	2100
species	Sulfolobus islandicus	221	0	43080
species	Hyposoter fugitivus ichnovirus	200	200	265522
species	Corynebacterium resistens	198	0	258224
species	Pseudomonas putida	173	30	303
species	Lactobacillus gasseri	167	0	1596
species	Pseudomonas poae	164	0	200451
species	Streptococcus gordonii	151	0	1302
species	Aeromonas hydrophila	146	1	644
species	Helicobacter cetorum	145	0	138563
species	Streptococcus sp. I-P16	140	140	1156433
species	Vaccinia virus	138	138	10245
species	Prevotella denticola	137	0	28129
species	Rothia dentocariosa	134	0	2047
species	Lawsonia intracellularis	125	11	29546
species	Streptococcus anginosus	118	18	1328
species	Corynebacterium urealyticum	111	83	43771
species	Delftia sp. Cs1-4	108	108	742013
species	Streptococcus sp. I-G2	107	107	1156431
species	Delftia acidovorans	106	0	80866
species	Pseudomonas protegens	97	80	380021
species	Choristoneura occidentalis granulovirus	93	93	364745
species	Streptococcus intermedius	91	46	1338
species	Streptococcus sanguinis	85	0	1305
species	Streptococcus constellatus	85	0	76860
species	Histophilus somni	83	0	731
species	Streptococcus pyogenes	81	75	1314
species	Providencia stuartii	81	0	588
species	Ectocarpus siliculosus virus 1	81	81	37665
species	Aggregatibacter aphrophilus	81	0	732
species	Streptococcus thermophilus	80	76	1308
species	Paenibacillus mucilaginosus	80	0	61624
species	Atopobium parvulum	78	0	1382
species	Streptococcus oligofermentans	75	0	195041
species	Solibacillus silvestris	73	0	76853
species	Collimonas fungivorans	72	0	158899
species	Yersinia phage phiA1122	72	72	227720
species	Prevotella sp. oral taxon 299	71	0	652716
species	Methanococcus voltae	68	0	2188
species	Caldanaerobacter subterraneus	63	0	911092
species	Pseudomonas sp. UW4	62	62	1207075
species	Prevotella intermedia	61	0	28131
species	Buchnera aphidicola	61	0	9
species	Herbaspirillum seropedicae	61	0	964
species	Lactobacillus sanfranciscensis	59	0	1625
species	Corynebacterium jeikeium	58	0	38289
species	Bacteroides fragilis	57	39	817
species	Methanomethylovorans hollandica	56	0	101192
species	Janthinobacterium sp. Marseille	54	54	375286
species	Listeria monocytogenes	53	53	1639
species	Salmonella enterica	53	2	28901
species	Thermodesulfobacterium geofontis	51	0	1295609
species	Borrelia duttonii	50	0	40834
species	Cotesia congregata bracovirus	50	50	39640
species	Campylobacter concisus	47	0	199
species	Bacillus cereus	47	35	1396
species	Salinarchaeum sp. Harcht-Bsk1	47	47	1333523
species	Candidatus Liberibacter americanus	46	0	309868
species	Pseudomonas stutzeri	46	11	316
species	Filifactor alocis	45	0	143361
species	Treponema pedis	45	0	409322
species	Pseudomonas savastanoi	45	0	29438
species	Tannerella forsythia	44	0	28112
species	Verminephrobacter eiseniae	44	0	364317
species	Bifidobacterium longum	43	30	216816
species	Thermoanaerobacter wiegelii	43	0	46354
species	Burkholderia ambifaria	42	18	152480
species	Ralstonia solanacearum	41	19	305
species	Mycoplasma cynos	40	0	171284
species	Porphyromonas gingivalis	40	12	837
species	Burkholderia lata	39	39	482957
species	Mycoplasma pulmonis	38	0	2107
species	Candidatus Carsonella ruddii	37	0	114186
species	Treponema denticola	35	0	158
species	Psychromonas ingrahamii	34	0	357794
species	Helicobacter bizzozeronii	34	0	56877
species	Lactobacillus crispatus	34	0	47770
species	Murid herpesvirus 2	33	33	28304
species	Trichodesmium erythraeum	33	0	1206
species	Haliangium ochraceum	32	0	80816
species	Rickettsia africae	32	0	35788
species	Cronobacter sakazakii	32	3	28141
species	Propionibacterium acnes	31	29	1747
species	Enterobacter asburiae	31	0	61645
species	Rhizobium leguminosarum	30	0	384
species	Borrelia valaisiana	30	0	62088
species	Pseudomonas brassicacearum	29	0	930166
species	Bifidobacterium breve	29	14	1685
species	Lactobacillus johnsonii	29	19	33959
species	Human coronavirus NL63	27	27	277944
species	Bacteroides helcogenes	26	0	290053
species	Citrobacter koseri	26	0	545
species	Corynebacterium halotolerans	25	0	225326
species	Selenomonas sputigena	25	0	69823
species	Capnocytophaga ochracea	25	0	1018
species	Corynebacterium maris	25	0	575200
species	Klebsiella oxytoca	24	15	571
species	Methanosarcina barkeri	24	0	2208
species	Frog virus 3	24	24	10493
species	Herminiimonas arsenicoxydans	24	24	204773
species	Lactobacillus casei	23	13	1582
species	Enterobacter aerogenes	23	10	548
species	Pseudomonas mendocina	22	4	300
species	Tropheryma whipplei	22	15	2039
species	Dickeya dadantii	22	0	204038
species	Shigella flexneri	22	19	623
species	Parachlamydia acanthamoebae	21	0	83552
species	Pseudomonas entomophila	21	0	312306
species	Corynebacterium glutamicum	21	20	1718
species	Corynebacterium efficiens	21	0	152794
species	Finegoldia magna	20	0	1260
species	Geobacillus thermoleovorans	20	0	33941
species	Oscillatoria acuminata	19	0	118323
species	Serratia proteamaculans	19	0	28151
species	Xanthomonas campestris	19	13	339
species	Agrotis segetum nucleopolyhedrovirus	19	19	31508
species	Candidatus Sulcia muelleri	19	0	336810
species	Prevotella dentalis	19	0	52227
species	Pseudomonas resinovorans	19	0	53412
species	Serratia liquefaciens	18	0	614
species	Yersinia enterocolitica	18	0	630
species	Emiliania huxleyi virus 86	17	17	181082
species	Mycoplasma ovis	17	0	171632
species	Corynebacterium callunae	17	0	1721
species	Caldicellulosiruptor saccharolyticus	17	0	44001
species	Streptococcus mutans	17	15	1309
species	Alicycliphilus denitrificans	17	6	179636
species	Variovorax paradoxus	16	6	34073
species	Enterobacter sp. 638	16	16	399742
species	Bifidobacterium dentium	16	0	1689
species	Klebsiella variicola	16	0	244366
species	Bacillus infantis	15	0	324767
species	Propionibacterium propionicum	15	0	1750
species	Trichoplusia ni ascovirus 2c	14	14	328615
species	Roseburia hominis	14	0	301301
species	Xylella fastidiosa	14	13	2371
species	Streptococcus dysgalactiae	14	0	1334
species	Cupriavidus necator	14	5	106590
species	Sodalis glossinidius	14	0	63612
species	Pyrolobus fumarii	14	0	54252
species	Pseudomonas syringae	14	0	317
species	Polaromonas naphthalenivorans	13	0	216465
species	Enterococcus faecium	13	9	1352
species	Serratia plymuthica	13	4	82996
species	Haemophilus parasuis	13	10	738
species	Burkholderia phymatum	13	0	148447
species	Mamestra configurata nucleopolyhedrovirus A	13	13	207830
species	Candidatus Liberibacter solanacearum	13	0	556287
species	Lactobacillus salivarius	13	7	1624
species	Bacillus phage SPO1	13	13	10685
species	Pseudomonas fulva	12	0	47880
species	Burkholderia cepacia	12	0	292
species	Acinetobacter calcoaceticus	11	0	471
species	Cercopithecine herpesvirus 2	11	11	10317
species	Molluscum contagiosum virus	11	0	10279
species	Enterobacter lignolyticus	11	0	1334193
species	Tupaiid herpesvirus 1	11	11	10397
species	Arcanobacterium haemolyticum	11	0	28264
species	Burkholderia gladioli	11	0	28095
species	Laribacter hongkongensis	11	0	168471
species	Chromobacterium violaceum	11	0	536
species	Anabaena sp. 90	11	11	46234
species	Pseudomonas sp. VLB120	11	11	69328
species	Staphylococcus haemolyticus	11	0	1283
species	Mannheimia haemolytica	11	5	75985
species	Sorangium cellulosum	10	0	56
species	Pseudoxanthomonas spadix	10	0	415229
species	Azospira oryzae	10	0	146939
species	Dechloromonas aromatica	10	0	259537
species	Ramlibacter tataouinensis	10	0	94132
species	Natronococcus occultus	10	0	29288
species	Acidovorax sp. KKS102	10	10	358220
species	Pseudomonas phage B3	10	10	151599
species	Methanobrevibacter ruminantium	10	0	83816
species	Bordetella pertussis	10	10	520
species	Lactobacillus reuteri	10	9	1598
species	Leptotrichia buccalis	10	0	40542
species	Comamonas testosteroni	10	0	285
species	Candidatus Portiera aleyrodidarum	10	7	91844
species	Pseudomonas syringae group genomosp. 3	9	0	251701
species	Yersinia pseudotuberculosis	9	0	633
species	Candidatus Endolissoclinum faulkneri	9	0	1263979
species	Burkholderia thailandensis	9	2	57975
species	Ralstonia pickettii	9	4	329
species	Streptococcus equi	9	0	1336
species	Bordetella petrii	9	0	94624
species	Kytococcus sedentarius	9	0	1276
species	Pseudoxanthomonas suwonensis	9	0	314722
species	Xanthomonas oryzae	9	5	347
species	Helicobacter pylori	9	2	210
species	Enterobacteriaceae bacterium strain FGI 57	9	9	693444
species	Mycoplasma gallisepticum	9	8	2096
species	Human herpesvirus 4	9	8	10376
species	Human herpesvirus 7	8	8	10372
species	Cyprinid herpesvirus 3	8	8	180230
species	Human parainfluenza virus 3	8	8	11216
species	Burkholderia vietnamiensis	8	0	60552
species	Pseudomonas denitrificans	8	0	43306
species	Natrialba magadii	8	0	13769
species	Corynebacterium terpenotabidum	8	0	89154
species	Pseudomonas phage phiKZ	8	8	169683
species	Corynebacterium argentoratense	8	0	42817
species	[Clostridium] difficile	8	2	1496
species	Corynebacterium variabile	8	0	1727
species	Burkholderia pseudomallei	8	4	28450
species	Escherichia fergusonii	8	0	564
species	Candidatus Zinderia insecticola	8	0	884215
species	Fretibacterium fastidiosum	8	8	651822
species	Burkholderia multivorans	8	0	87883
species	Methanolobus psychrophilus	8	0	420950
species	Prochlorococcus marinus	7	0	1219
species	Porphyromonas asaccharolytica	7	0	28123
species	Chlamydia pecorum	7	4	85991
species	Cellulophaga algicola	7	0	59600
species	Mycoplasma genitalium	7	0	2097
species	Human adenovirus C	7	7	129951
species	Xanthomonas albilineans	7	0	29447
species	Advenella kashmirensis	7	0	310575
species	Citrobacter rodentium	7	0	67825
species	Burkholderia phytofirmans	7	0	261302
species	Pseudomonas phage phiCTX	7	7	35343
species	Streptomyces cattleya	7	0	29303
species	Rhodopseudomonas palustris	6	0	1076
species	Candidatus Accumulibacter phosphatis	6	0	327160
species	Bordetella avium	6	0	521
species	Thauera sp. MZ1T	6	6	85643
species	Pseudomonas phage F116	6	6	280701
species	Nocardia farcinica	6	0	37329
species	Pasteurella multocida	6	5	747
species	Caldicellulosiruptor bescii	6	0	31899
species	Methanococcoides burtonii	6	0	29291
species	Taterapox virus	6	6	28871
species	Sideroxydans lithotrophicus	6	0	63745
species	Erwinia billingiae	6	0	182337
species	Ectromelia virus	6	6	12643
species	Cryptobacterium curtum	6	0	84163
species	Gardnerella vaginalis	6	1	2702
species	Azoarcus sp. KH32C	6	6	748247
species	Lactobacillus sakei	6	0	1599
species	Cupriavidus taiwanensis	6	0	164546
species	Zymomonas mobilis	6	0	542
species	Pectobacterium carotovorum	6	0	554
species	Shigella boydii	6	1	621
species	Lactobacillus paracasei	6	0	1597
species	Burkholderia xenovorans	6	0	36873
species	Sulfuricella denitrificans	6	0	649841
species	Burkholderia sp. CCGE1003	6	6	640512
species	Bacteroides vulgatus	6	0	821
species	Actinoplanes sp. N902-109	6	6	649831
species	Microbacterium testaceum	6	0	2033
species	Oscillatoria nigro-viridis	6	0	482564
species	Haemophilus phage HP1	6	6	10690
species	Serratia symbiotica	6	0	138074
species	Pseudoalteromonas haloplanktis	6	0	228
species	Corynebacterium kroppenstedtii	5	0	161879
species	Borrelia crocidurae	5	0	29520
species	Gallid herpesvirus 3	5	5	35250
species	Methylobacterium extorquens	5	0	408
species	Cowpox virus	5	5	10243
species	Enterobacteria phage P1	5	5	10678
species	Tsukamurella paurometabola	5	0	2061
species	Caldicellulosiruptor kronotskyensis	5	0	413889
species	Pseudomonas phage F10	5	5	347324
species	Synechococcus sp. WH 7803	5	5	32051
species	Aggregatibacter actinomycetemcomitans	5	3	714
species	Methanothermococcus okinawensis	5	0	155863
species	Olsenella uli	5	0	133926
species	Methanococcus aeolicus	5	0	42879
species	Lactobacillus ruminis	5	0	1623
species	Bacillus amyloliquefaciens	5	5	1390
species	Leisingera methylohalidivorans	5	0	133924
species	Dickeya zeae	5	0	204042
species	Alistipes shahii	5	0	328814
species	Pseudomonas monteilii	5	5	76759
species	Acidovorax sp. JS42	5	5	232721
species	Leptothrix cholodnii	5	0	34029
species	Pelodictyon phaeoclathratiforme	5	0	34090
species	Streptococcus lutetiensis	5	0	150055
species	Enterobacter sp. R4-368	5	5	1166130
species	Nocardia cyriacigeorgica	5	0	135487
species	Mycoplasma conjunctivae	5	0	45361
species	Alcanivorax dieselolei	5	0	285091
species	Shewanella sp. ANA-3	5	5	94122
species	Cupriavidus metallidurans	5	0	119219
species	Pseudomonas phage DMS3	5	5	389469
species	Monkeypox virus	4	0	10244
species	Brachyspira pilosicoli	4	2	52584
species	Albidiferax ferrireducens	4	0	192843
species	Anaerococcus prevotii	4	0	33034
species	Pseudomonas phage D3	4	4	31535
species	Actinobacillus suis	4	0	716
species	Lactobacillus delbrueckii	4	0	1584
species	Arthrospira platensis	4	0	118562
species	Methanosarcina mazei	4	0	2209
species	Pseudogulbenkiania sp. NH8B	4	4	748280
species	Pantoea ananatis	4	2	553
species	Stigmatella aurantiaca	4	0	41
species	Blattabacterium sp. (Blaberus giganteus)	4	4	1186051
species	Lactococcus lactis	4	0	1358
species	Rhodospirillum centenum	4	0	34018
species	Beutenbergia cavernae	4	0	84757
species	Acidovorax citrulli	4	0	80869
species	Rhodococcus equi	4	0	43767
species	Edwardsiella ictaluri	4	0	67780
species	Alicyclobacillus acidocaldarius	4	0	405212
species	Geodermatophilus obscurus	4	0	1861
species	Bacillus subtilis	4	0	1423
species	Erwinia tasmaniensis	4	0	338565
species	Streptococcus infantarius	4	0	102684
species	Saccharothrix espanaensis	4	0	103731
species	Acinetobacter oleivorans	4	0	1148157
species	Clostridium botulinum	4	1	1491
species	Alistipes finegoldii	4	0	214856
species	Halovivax ruber	4	0	387341
species	Lactobacillus phage KC5a	4	4	363555
species	Actinobacillus pleuropneumoniae	4	4	715
species	Coprococcus catus	4	0	116085
species	Rhodanobacter denitrificans	4	4	666685
species	Raoultella ornithinolytica	4	0	54291
species	Beijerinckia indica	4	0	533
species	Sinorhizobium meliloti	4	4	382
species	Mycoplasma arthritidis	4	0	2111
species	Caulobacter sp. K31	4	4	366602
species	Bibersteinia trehalosi	4	0	47735
species	Methylobacterium nodulans	4	0	114616
species	Streptomyces bingchenggensis	4	0	379067
species	Nyamanini virus	4	4	644610
species	Nitrosomonas europaea	4	0	915
species	Streptomyces venezuelae	4	0	54571
species	Candidatus Azobacteroides pseudotrichonymphae	4	0	511435
species	Burkholderia glumae	4	0	337
species	Nocardiopsis dassonvillei	3	0	2014
species	Rubrivivax gelatinosus	3	0	28068
species	Mycobacterium chubuense	3	0	1800
species	Shimwellia blattae	3	0	563
species	Geobacillus sp. C56-T3	3	3	691437
species	Azotobacter vinelandii	3	3	354
species	Polaribacter sp. MED152	3	3	313598
species	Candidatus Hamiltonella defensa	3	0	138072
species	Nostoc punctiforme	3	0	272131
species	Streptomyces scabiei	3	0	1930
species	Desulfovibrio desulfuricans	3	0	876
species	Ilyobacter polytropus	3	0	167642
species	Pedobacter saltans	3	0	151895
species	Polaromonas sp. JS666	3	3	296591
species	Aerococcus urinae	3	0	1376
species	Borrelia recurrentis	3	0	44449
species	Halomonas elongata	3	0	2746
species	Arthrobacter chlorophenolicus	3	0	85085
species	Methanocella conradii	3	0	1175444
species	Lactobacillus acidophilus	3	0	1579
species	Burkholderia sp. YI23	3	3	1097668
species	Bacteroides xylanisolvens	3	0	371601
species	Cardinium endosymbiont of Encarsia pergandiella	3	0	249402
species	Azoarcus sp. BH72	3	3	62928
species	Ruegeria pomeroyi	3	0	89184
species	Ovine herpesvirus 2	3	3	10398
species	Clostridium perfringens	3	0	1502
species	Frankia alni	3	0	1859
species	Enterococcus sp. 7L76	3	3	657310
species	Mycobacterium sp. JDM601	3	3	875328
species	Streptococcus parauberis	3	0	1348
species	Methylobacterium radiotolerans	3	0	31998
species	Bifidobacterium asteroides	3	0	1684
species	Exiguobacterium sp. AT1b	3	3	360911
species	Odoribacter splanchnicus	3	0	28118
species	Torque teno virus 16	3	3	687355
species	Bacteroides salanitronis	3	0	376805
species	Chamaesiphon minutus	3	0	1173032
species	Thermacetogenium phaeum	3	0	85874
species	Arthrobacter phenanthrenivorans	3	0	361575
species	Catenulispora acidiphila	3	0	304895
species	Acidithiobacillus ferrivorans	3	0	160808
species	Oryctes rhinoceros virus	3	3	92521
species	Spodoptera frugiperda ascovirus 1a	3	3	113370
species	Parvibaculum lavamentivorans	3	0	256618
species	Pandoraea sp. RB-44	3	3	1380774
species	Amycolicicoccus subflavus	3	0	639313
species	Haloferax mediterranei	3	0	2252
species	Microcystis aeruginosa	3	0	1126
species	Francisella tularensis	3	0	263
species	Streptococcus iniae	3	0	1346
species	Helicoverpa zea single nucleopolyhedrovirus	3	3	10468
species	gamma proteobacterium HdN1	3	3	83406
species	Sinorhizobium fredii	3	0	380
species	Rhodospirillum photometricum	3	0	1084
species	Candidatus Nasuia deltocephalinicola	2	0	1160784
species	Cellvibrio japonicus	2	0	155077
species	Enterobacteria phage lambda	2	2	10710
species	Bacillus anthracis	2	2	1392
species	Variola virus	2	2	10255
species	Bradyrhizobium oligotrophicum	2	0	44255
species	Lactobacillus amylovorus	2	0	1604
species	Mycobacterium yongonense	2	0	1203599
species	Corynebacterium ulcerans	2	2	65058
species	Paracoccus aminophilus	2	0	34003
species	Pseudomonas phage PAJU2	2	2	504346
species	Salmonella bongori	2	2	54736
species	Rhodococcus jostii	2	0	132919
species	Methylobacterium sp. 4-46	2	2	426117
species	Vibrio campbellii	2	0	680
species	White spot syndrome virus	2	0	342409
species	Arthrobacter arilaitensis	2	0	256701
species	Edwardsiella tarda	2	2	636
species	Streptococcus gallolyticus	2	0	315405
species	Azospirillum lipoferum	2	0	193
species	[Cellvibrio] gilvus	2	0	11
species	Staphylococcus phage SAP-26	2	2	872294
species	Lactobacillus buchneri	2	0	1581
species	Mahella australiensis	2	0	252966
species	Desulfotomaculum acetoxidans	2	0	58138
species	Streptococcus phage PH15	2	2	537874
species	Spiroplasma diminutum	2	0	216936
species	Propionibacterium acidipropionici	2	0	1748
species	Leuconostoc gelidum	2	0	1244
species	Leptospira interrogans	2	0	173
species	Ignavibacterium album	2	0	591197
species	Aster yellows witches'-broom phytoplasma	2	0	229545
species	Chlorobaculum tepidum	2	0	1097
species	Brachybacterium faecium	2	0	43669
species	Lactobacillus johnsonii prophage Lj771	2	2	139871
species	Desulfobulbus propionicus	2	0	894
species	Thermomonospora curvata	2	0	2020
species	Macacine herpesvirus 1	2	2	10325
species	Candidatus Hodgkinia cicadicola	2	0	573658
species	Roseiflexus castenholzii	2	0	120962
species	Shewanella amazonensis	2	0	60478
species	Carnobacterium maltaromaticum	2	0	2751
species	Mycobacterium rhodesiae	2	0	36814
species	Cronobacter turicensis	2	0	413502
species	Mesotoga prima	2	0	1184387
species	Lysinibacillus sphaericus	2	0	1421
species	Macrococcus caseolyticus	2	0	69966
species	Streptococcus pasteurianus	2	0	197614
species	Eubacterium eligens	2	0	39485
species	Zobellia galactanivorans	2	2	63186
species	Methanoculleus bourgensis	2	0	83986
species	Burkholderia sp. RPE64	2	2	758793
species	Camelpox virus	2	2	28873
species	Culex nigripalpus nucleopolyhedrovirus	2	2	130556
species	Hyphomicrobium denitrificans	2	0	53399
species	Sphingomonas sp. MM-1	2	2	745310
species	Rhizobium sp. IRBG74	2	2	424182
species	Abelson murine leukemia virus	2	2	11788
species	Enterococcus hirae	2	0	1354
species	Riemerella anatipestifer	2	2	34085
species	Corynebacterium pseudotuberculosis	2	2	1719
species	Marinobacter adhaerens	2	0	1033846
species	Mobiluncus curtisii	2	0	2051
species	Conexibacter woesei	2	0	191495
species	Oscillibacter valericigenes	2	0	351091
species	Equid herpesvirus 2	2	2	12657
species	Cryptophlebia leucotreta granulovirus	2	2	35254
species	Methanosarcina acetivorans	2	0	2214
species	Rhodospirillum rubrum	2	2	1085
species	Candidatus Moranella endobia	2	2	1048758
species	Gallionella capsiferriformans	2	0	370405
species	Crinalium epipsammum	2	0	241425
species	Frankia symbiont of Datisca glomerata	2	2	656024
species	Methylibium petroleiphilum	2	0	105560
species	Trichormus azollae	2	0	1164
species	Nitrobacter winogradskyi	2	0	913
species	Alkaliphilus metalliredigens	2	0	208226
species	Micavibrio aeruginosavorus	2	0	349221
species	Rhodobacter capsulatus	2	0	1061
species	Faecalibacterium prausnitzii	2	0	853
species	Haloquadratum walsbyi	2	0	293091
species	Streptococcus macedonicus	2	0	59310
species	Aeromonas salmonicida	2	0	645
species	Pantoea sp. At-9b	2	2	592316
species	Paracoccus denitrificans	2	0	266
species	Kangiella koreensis	2	0	261964
species	Cylindrospermum stagnale	2	0	142864
species	Cercopithecine herpesvirus 5	2	2	50292
species	Weeksella virosa	2	0	1014
species	Influenza A virus	2	0	11320
species	Pseudomonas phage D3112	2	2	10708
species	Mycobacterium abscessus	2	1	36809
species	Marivirga tractuosa	2	0	1006
species	Enterobacteria phage ID18 sensu lato	2	2	489829
species	Agrobacterium fabrum	2	0	1176649
species	Geobacter sulfurreducens	2	2	35554
species	Xylanimonas cellulosilytica	2	0	186189
species	Pusillimonas sp. T7-7	2	2	1007105
species	Staphylococcus warneri	2	0	1292
species	Coxiella burnetii	2	2	777
species	Campylobacter curvus	2	0	200
species	Staphylococcus phage phiMR25	2	2	487152
species	Pseudomonas phage EL	2	2	273133
species	Mycoplasma mycoides	2	0	2102
species	Burkholderia rhizoxinica	2	0	412963
species	Burkholderia sp. KJ006	2	2	416344
species	Nitrobacter hamburgensis	2	0	912
species	Enterobacteria phage G4 sensu lato	2	2	374844
species	Streptomyces davawensis	2	0	348043
species	Cupriavidus pinatubonensis	2	0	248026
species	Photorhabdus asymbiotica	2	2	291112
species	Pantoea vagans	2	0	470934
species	Bacillus coagulans	2	0	1398
species	Pseudomonas phage MP22	2	2	397353
species	Candidatus Saccharimonas aalborgensis	2	2	1332188
species	Nocardia brasiliensis	2	0	37326
species	Mesorhizobium loti	1	0	381
species	Planctomyces limnophilus	1	0	120
species	Ruminococcus bromii	1	0	40518
species	Bifidobacterium thermophilum	1	0	33905
species	Frankia sp. EuI1c	1	1	298654
species	Shewanella loihica	1	0	359303
species	Kocuria rhizophila	1	0	72000
species	Lumpy skin disease virus	1	0	59509
species	Cellulomonas fimi	1	0	1708
species	Rickettsia slovaca	1	1	35794
species	Eggerthella lenta	1	0	84112
species	Methylobacterium populi	1	0	223967
species	Salinispora arenicola	1	0	168697
species	Megamonas hypermegale	1	0	158847
species	Fibrella aestuarina	1	0	651143
species	Bradyrhizobium sp. S23321	1	1	335659
species	Clostridium saccharoperbutylacetonicum	1	0	36745
species	Papiine herpesvirus 2	1	1	340907
species	Agrobacterium sp. H13-3	1	1	861208
species	Thiomonas intermedia	1	0	926
species	Capnocytophaga canimorsus	1	0	28188
species	Mycobacterium canettii	1	0	78331
species	Pseudonocardia dioxanivorans	1	0	240495
species	alpha proteobacterium HIMB5	1	1	859653
species	Polymorphum gilvum	1	0	991904
species	Thermoanaerobacterium thermosaccharolyticum	1	1	1517
species	Desulfococcus oleovorans	1	0	181663
species	Rhodobacter sphaeroides	1	0	1063
species	Asticcacaulis excentricus	1	0	78587
species	Propionibacterium freudenreichii	1	0	1744
species	Oligotropha carboxidovorans	1	1	40137
species	Torque teno virus 1	1	1	687340
species	Kribbella flavida	1	0	182640
species	Thioalkalivibrio sp. K90mix	1	1	396595
species	Brachyspira murdochii	1	0	84378
species	Streptococcus phage SM1	1	1	157924
species	Glaciecola sp. 4H-3-7+YE-5	1	1	983545
species	Mycoplasma bovis	1	1	28903
species	Meleagrid herpesvirus 1	1	1	37108
species	Bdellovibrio exovorus	1	0	453816
species	Streptobacillus moniliformis	1	0	34105
species	Bartonella clarridgeiae	1	0	56426
species	Haemophilus ducreyi	1	0	730
species	Streptococcus uberis	1	0	1349
species	Frankia sp. EAN1pec	1	1	298653
species	Rahnella aquatilis	1	0	34038
species	Nakamurella multipartita	1	0	53461
species	Lactobacillus helveticus	1	1	1587
species	Cyanobacterium stanieri	1	0	102235
species	Sinorhizobium medicae	1	0	110321
species	Photorhabdus luminescens	1	0	29488
species	Nitratifractor salsuginis	1	0	269261
species	Amycolatopsis mediterranei	1	1	33910
species	Nitrosomonas eutropha	1	0	916
species	Candidatus Arthromitus sp. SFB-mouse	1	1	49118
species	Vibrio anguillarum	1	0	55601
species	Hahella chejuensis	1	0	158327
species	Mycoplasma suis	1	0	57372
species	Magnetospirillum gryphiswaldense	1	0	55518
species	Candidatus Pelagibacter ubique	1	0	198252
species	Streptomyces coelicolor	1	0	1902
species	Polynucleobacter necessarius	1	0	576610
species	Borrelia burgdorferi	1	0	139
species	Micromonospora aurantiaca	1	0	47850
species	Actinobacillus succinogenes	1	0	67854
species	Caulobacter vibrioides	1	0	155892
species	Moroccan watermelon mosaic virus	1	1	167129
species	Woolly monkey sarcoma virus	1	1	11970
species	Prevotella ruminicola	1	0	839
species	Methanobrevibacter sp. AbM4	1	1	224719
species	Aeromonas veronii	1	0	654
species	Ornithobacterium rhinotracheale	1	0	28251
species	Microlunatus phosphovorus	1	0	29405
species	Eubacterium rectale	1	1	39491
species	Nitrosomonas sp. Is79A3	1	1	261292
species	Xanthomonas euvesicatoria	1	0	456327
species	Legionella pneumophila	1	1	446
species	Mycoplasma fermentans	1	1	2115
species	Cyanobium gracile	1	0	59930
species	Lactobacillus plantarum	1	0	1590
species	Sphaerobacter thermophilus	1	0	2057
species	Isoptericola variabilis	1	0	139208
species	Mycoplasma penetrans	1	0	28227
species	Invertebrate iridescent virus 6	1	1	176652
species	Human herpesvirus 3	1	1	10335
species	Bradyrhizobium diazoefficiens	1	0	1355477
species	Bifidobacterium bifidum	1	0	1681
species	Yersinia pestis	1	0	632
species	Phycisphaera mikurensis	1	0	547188
species	Erwinia amylovora	1	1	552
species	Shigella dysenteriae	1	0	622
species	Mycoplasma hominis	1	0	2098
species	Sphingobium sp. SYK-6	1	1	627192
species	Mycoplasma leachii	1	1	2105
species	Methanobrevibacter smithii	1	0	2173
species	Streptomyces rapamycinicus	1	0	1226757
species	Geobacillus thermoglucosidasius	1	0	1426
species	Chrysodeixis chalcites nucleopolyhedrovirus	1	1	320432
species	Terriglobus roseus	1	0	392734
species	Methylomicrobium alcaliphilum	1	0	271065
species	Caulobacter segnis	1	0	88688
species	Sphingobium japonicum	1	0	332056
species	Saccharopolyspora erythraea	1	0	1836
species	Ateline herpesvirus 3	1	1	85618
species	Sanguibacter keddieii	1	0	60920
species	Amycolatopsis orientalis	1	0	31958
species	Bacillus weihenstephanensis	1	0	86662
species	Vibrio nigripulchritudo	1	1	28173
species	Borrelia bissettii	1	0	64897
species	Halorhodospira halophila	1	0	1053
species	Lactobacillus phage phiadh	1	1	12417
species	secondary endosymbiont of Heteropsylla cubana	1	1	134287
species	Methylomonas methanica	1	0	421
species	Thiomonas arsenitoxydans	1	1	426114
species	Flavobacterium branchiophilum	1	0	55197
species	secondary endosymbiont of Ctenarytaina eucalypti	1	1	1199245
species	Chitinophaga pinensis	1	0	79329
species	Stackebrandtia nassauensis	1	0	283811
species	Desulfovibrio africanus	1	0	873
species	Butyrivibrio proteoclasticus	1	0	43305
species	Rivularia sp. PCC 7116	1	1	373994
species	Deinococcus deserti	1	0	310783
species	Sebaldella termitidis	1	0	826
species	Paramecium bursaria Chlorella virus 1	1	1	10506
species	Mycobacterium tuberculosis	1	0	1773
species	Kineococcus radiotolerans	1	0	131568
species	Glaciecola nitratireducens	1	0	300231
species	Dyadobacter fermentans	1	0	94254
species	Ruminococcus sp. SR1/5	1	1	657323
species	Ureaplasma urealyticum	1	0	2130
species	Jonesia denitrificans	1	0	43674
species	Streptomyces violaceusniger	1	0	68280
species	Thiocystis violascens	1	0	73141
species	Suid herpesvirus 1	1	1	10345
species	Bacillus cytotoxicus	1	0	580165
species	Candidatus Phytoplasma mali	1	1	37692
species	Arthrobacter sp. Rue61a	1	1	1118963
species	Cyanothece sp. PCC 7424	1	1	65393
species	Shigella sonnei	1	1	624
species	Caldicellulosiruptor kristjanssonii	1	0	52765
species	Staphylococcus aureus subsp. aureus MSHR1132	1	1	985002
species	Chelativorans sp. BNC1	1	1	266779
species	Helicobacter cinaedi	1	0	213
species	Burkholderia sp. CCGE1002	1	1	640511
species	Actinoplanes friuliensis	1	0	196914
species	Enterococcus casseliflavus	1	0	37734
species	Amsacta moorei entomopoxvirus 'L'	1	1	28321
species	Enterobacteria phage ID2 Moscow/ID/2001	1	1	511969
species	Mycobacterium leprae	1	1	1769
species	Renibacterium salmoninarum	1	0	1646
species	[Clostridium] sticklandii	1	1	1511
species	Bifidobacterium animalis	1	0	28025
species	Glossina hytrovirus	1	0	1285594
species	Desulfovibrio alaskensis	1	0	58180
species	Komagataeibacter medellinensis	1	0	1177712
species	Mycobacterium smegmatis	1	0	1772
species	Helicobacter hepaticus	1	0	32025
species	Hydrogenobaculum sp. Y04AAS1	1	1	380749
species	Enterococcus mundtii	1	0	53346
species	Leadbetterella byssophila	1	0	316068
species	Geobacter uraniireducens	1	0	351604
species	Micrococcus luteus	1	0	1270
species	Pseudomonas phage MP29	1	1	505291
species	Burkholderia sp. CCGE1001	1	1	640510
subspecies	Enterobacter cloacae subsp. cloacae	1238	62	336306
subspecies	Klebsiella pneumoniae subsp. pneumoniae	475	267	72407
subspecies	Morganella morganii subsp. morganii	346	0	180434
subspecies	Fusobacterium nucleatum subsp. vincentii	164	0	155615
subspecies	Staphylococcus aureus subsp. aureus	116	88	46170
subspecies	Fusobacterium nucleatum subsp. animalis	98	0	76859
subspecies	Streptococcus constellatus subsp. pharyngis	85	85	184250
subspecies	Caldanaerobacter subterraneus subsp. tengcongensis	63	0	119072
subspecies	Enterobacter cloacae subsp. dissolvens	58	0	69219
subspecies	Salmonella enterica subsp. enterica	49	16	59201
subspecies	Fusobacterium nucleatum subsp. nucleatum	38	0	76856
subspecies	Pseudomonas brassicacearum subsp. brassicacearum	29	0	86264
subspecies	Yersinia enterocolitica subsp. palearctica	18	0	150053
subspecies	Streptococcus dysgalactiae subsp. equisimilis	14	2	119602
subspecies	Bifidobacterium longum subsp. longum	9	1	1679
subspecies	Lactobacillus sakei subsp. sakei	6	0	214326
subspecies	Lactobacillus paracasei subsp. paracasei	6	0	47714
subspecies	Pectobacterium carotovorum subsp. carotovorum	6	3	555
subspecies	Zymomonas mobilis subsp. mobilis	6	0	120045
subspecies	Streptococcus equi subsp. zooepidemicus	5	2	40041
subspecies	Streptococcus equi subsp. equi	4	0	148942
subspecies	Streptococcus infantarius subsp. infantarius	4	0	150054
subspecies	Lactobacillus delbrueckii subsp. bulgaricus	4	0	1585
subspecies	Beijerinckia indica subsp. indica	4	0	31994
subspecies	Alicyclobacillus acidocaldarius subsp. acidocaldarius	4	0	1388
subspecies	Nocardiopsis dassonvillei subsp. dassonvillei	3	0	568208
subspecies	Desulfovibrio desulfuricans subsp. desulfuricans	3	0	115117
subspecies	Francisella tularensis subsp. holarctica	3	0	119857
subspecies	Aeromonas salmonicida subsp. salmonicida	2	0	29491
subspecies	Lactococcus lactis subsp. lactis	2	2	1360
subspecies	Bifidobacterium longum subsp. infantis	2	0	1682
subspecies	Streptococcus gallolyticus subsp. gallolyticus	2	2	53354
subspecies	Salmonella enterica subsp. arizonae	2	0	59203
subspecies	Mycoplasma mycoides subsp. mycoides	2	0	2103
subspecies	Lactococcus lactis subsp. cremoris	2	0	1359
subspecies	Bifidobacterium animalis subsp. lactis	1	1	302911
subspecies	Lactobacillus plantarum subsp. plantarum	1	0	337330
subspecies	Pasteurella multocida subsp. multocida	1	0	44283
subspecies	Propionibacterium freudenreichii subsp. shermanii	1	0	1752
subspecies	Mycobacterium abscessus subsp. bolletii	1	0	319705
subspecies	Polynucleobacter necessarius subsp. necessarius	1	0	44014
subspecies	Bacillus subtilis subsp. subtilis	1	0	135461
subspecies	Bacillus subtilis subsp. natto	1	0	86029
subspecies	Photorhabdus luminescens subsp. laumondii	1	0	141679
strain	Achromobacter xylosoxidans NBRC 15126 = ATCC 27061	619358	619358	1216976
strain	Moraxella catarrhalis RH4	6984	6984	749219
strain	Mycoplasma hyopneumoniae J	2239	2239	262719
strain	Rothia mucilaginosa DY-18	2082	2082	680646
strain	Pseudomonas aeruginosa PA7	1923	1923	381754
strain	Stenotrophomonas maltophilia K279a	1636	1636	522373
strain	Serratia marcescens WW4	1351	1351	435998
strain	Haemophilus influenzae 86-028NP	1266	1266	281310
strain	Serratia marcescens FGI94	1138	1138	1249634
strain	Stenotrophomonas maltophilia D457	1090	1090	1163399
strain	Enterobacter cloacae subsp. cloacae NCTC 9394	1012	1012	718254
strain	Pseudomonas fluorescens SBW25	1009	1009	216595
strain	Prevotella melaninogenica ATCC 25845	977	977	553174
strain	Pseudomonas fluorescens A506	796	796	1037911
strain	Bacillus thuringiensis MC28	763	763	1195464
strain	Haemophilus parainfluenzae T3T1	713	713	862965
strain	Corynebacterium aurimucosum ATCC 700975	702	702	548476
strain	Streptococcus parasanguinis ATCC 15912	678	678	760570
strain	Haemophilus influenzae KR494	667	667	1334187
strain	Streptococcus parasanguinis FW213	651	651	1114965
strain	Streptococcus suis JS14	645	645	945704
strain	Streptococcus mitis B6	612	612	365659
strain	Stenotrophomonas maltophilia R551-3	563	563	391008
strain	Streptococcus oralis Uo5	528	528	927666
strain	Neisseria lactamica 020-06	522	522	489653
strain	Methanococcus vannielii SB	505	505	406327
strain	Stenotrophomonas maltophilia JV3	502	502	868597
strain	Mycoplasma hyopneumoniae 232	493	493	295358
strain	Lactobacillus rhamnosus GG	483	483	568703
strain	Haemophilus influenzae PittEE	450	450	374930
strain	Lactobacillus rhamnosus LOCK900	443	443	1316933
strain	Pseudomonas aeruginosa NCGM2.S1	379	379	1089456
strain	Neisseria gonorrhoeae TCDC-NG08107	367	367	940296
strain	Morganella morganii subsp. morganii KT	346	346	1124991
strain	Haemophilus influenzae R2846	337	337	262727
strain	Achromobacter xylosoxidans NH44784-1996	320	320	1167634
strain	Streptococcus pseudopneumoniae IS7493	299	299	1054460
strain	Haemophilus influenzae 10810	290	290	862964
strain	Veillonella parvula DSM 2008	272	272	479436
strain	Streptococcus salivarius JIM8777	250	250	347253
strain	Haemophilus influenzae PittGG	224	224	374931
strain	Sulfolobus islandicus M.16.27	221	221	427318
strain	Haemophilus influenzae R2866	210	210	262728
strain	Escherichia coli O157:H7 str. EC4115	199	199	444450
strain	Corynebacterium resistens DSM 45100	198	198	662755
strain	Haemophilus influenzae Rd KW20	191	191	71421
strain	Haemophilus influenzae F3047	185	185	935897
strain	Proteus mirabilis BB2000	179	179	1266738
strain	Enterococcus faecalis V583	179	179	226185
strain	Neisseria meningitidis serogroup C	171	9	135720
strain	Pseudomonas aeruginosa MTB-1	171	171	1415629
strain	Proteus mirabilis HI4320	171	171	529507
strain	Lactobacillus gasseri ATCC 33323	167	167	324831
strain	Pseudomonas poae RE*1-1-14	164	164	1282356
strain	Fusobacterium nucleatum subsp. vincentii 3_1_36A2	164	164	469604
strain	Streptococcus gordonii str. Challis substr. CH1	151	151	467705
strain	Klebsiella pneumoniae CG43	149	149	1244085
strain	Mycoplasma hyopneumoniae 7422	148	148	754503
strain	Helicobacter cetorum MIT 99-5656	145	145	1163745
strain	Aeromonas hydrophila ML09-119	145	145	1288394
strain	Streptococcus salivarius 57.I	144	144	1046629
strain	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	142	142	272620
strain	Prevotella denticola F0289	137	137	767031
strain	Rothia dentocariosa ATCC 17931	134	134	762948
strain	Mycoplasma hyopneumoniae 7448	133	133	262722
strain	Streptococcus salivarius CCHSS3	123	123	1048332
strain	Pseudomonas aeruginosa UCBPP-PA14	123	123	208963
strain	Neisseria meningitidis serogroup B	121	67	491
strain	Enterobacter cloacae subsp. cloacae ENHKU01	120	120	1211025
strain	Lawsonia intracellularis N343	113	113	1234378
strain	Pseudomonas aeruginosa PAO1	111	111	208964
strain	Haemophilus influenzae F3031	111	111	866630
strain	Mycoplasma hyorhinis HUB-1	109	109	872331
strain	Pseudomonas aeruginosa B136-33	108	108	1280938
strain	Delftia acidovorans SPH-1	106	106	398578
strain	Klebsiella pneumoniae KCTC 2242	106	106	1049565
strain	Fusobacterium nucleatum subsp. animalis 4_8	98	98	469607
strain	Burkholderia cenocepacia J2315	92	92	216591
strain	Neisseria meningitidis alpha14	92	92	662598
strain	Pseudomonas aeruginosa SCV20265	89	89	1427342
strain	Pseudomonas putida DOT-T1E	88	88	1196325
strain	Neisseria meningitidis 053442	85	85	374833
strain	Streptococcus sanguinis SK36	85	85	388919
strain	Pseudomonas aeruginosa RP73	84	84	1340851
strain	Haemophilus somnus 129PT	82	82	205914
strain	Aggregatibacter aphrophilus NJ8700	81	81	634176
strain	Providencia stuartii MRSN 2154	81	81	1157951
strain	Staphylococcus epidermidis ATCC 12228	79	79	176280
strain	Neisseria meningitidis M01-240355	79	79	935588
strain	Pseudomonas aeruginosa M18	78	78	941193
strain	Atopobium parvulum DSM 20469	78	78	521095
strain	Pseudomonas aeruginosa DK2	78	78	1093787
strain	Paenibacillus mucilaginosus K02	77	77	997761
strain	Streptococcus oligofermentans AS 1.3089	75	75	1302863
strain	Solibacillus silvestris StLB046	73	73	1002809
strain	Collimonas fungivorans Ter331	72	72	1005048
strain	Burkholderia cenocepacia MC0-3	71	71	406425
strain	Prevotella sp. oral taxon 299 str. F0039	71	71	575614
strain	Streptococcus agalactiae 2603V/R	71	71	208435
strain	Methanococcus voltae A3	68	68	456320
strain	Corynebacterium diphtheriae PW8	66	66	698964
strain	Acinetobacter baumannii 1656-2	63	63	696749
strain	Lactobacillus fermentum F-6	63	63	767453
strain	Thermoanaerobacter tengcongensis MB4	63	63	273068
strain	Pseudomonas fluorescens Pf0-1	62	62	205922
strain	Prevotella intermedia 17	61	61	246198
strain	Herbaspirillum seropedicae SmR1	61	61	757424
strain	Lactobacillus sanfranciscensis TMW 1.1304	59	59	714313
strain	Buchnera aphidicola BCc	59	59	372461
strain	Enterobacter cloacae subsp. dissolvens SDM	58	58	1104326
strain	Corynebacterium jeikeium K411	58	58	306537
strain	Methanomethylovorans hollandica DSM 15978	56	56	867904
strain	Klebsiella pneumoniae subsp. pneumoniae HS11286	56	56	1125630
strain	Enterobacter cloacae EcWSU1	55	55	1045856
strain	Neisseria meningitidis 8013	54	54	604162
strain	Staphylococcus epidermidis RP62A	54	54	176279
strain	Streptococcus anginosus C1051	53	53	862970
strain	Escherichia coli UMN026	52	52	585056
strain	Acinetobacter baumannii MDR-TJ	52	52	889738
strain	Thermodesulfobacterium geofontis OPF15	51	51	795359
strain	Streptococcus pneumoniae Hungary19A-6	50	50	487214
strain	Borrelia duttonii Ly	50	50	412419
strain	Neisseria meningitidis M04-240196	48	48	935593
strain	Mycoplasma hyorhinis SK76	48	48	1118964
strain	Streptococcus anginosus C238	47	47	862971
strain	Campylobacter concisus 13826	47	47	360104
strain	Acinetobacter baumannii ATCC 17978	46	46	400667
strain	Neisseria meningitidis WUE 2594	46	46	942513
strain	Candidatus Liberibacter americanus str. Sao Paulo	46	46	1261131
strain	Neisseria meningitidis alpha710	45	45	630588
strain	Treponema pedis str. T A4	45	45	1291379
strain	Filifactor alocis ATCC 35896	45	45	546269
strain	Pseudomonas syringae pv. phaseolicola 1448A	45	45	264730
strain	Enterobacter cloacae subsp. cloacae ATCC 13047	44	44	716541
strain	Verminephrobacter eiseniae EF01-2	44	44	391735
strain	Tannerella forsythia ATCC 43037	44	44	203275
strain	Thermoanaerobacter wiegelii Rt8.B1	43	43	697303
strain	Mycoplasma hyopneumoniae 168	42	3	907287
strain	Burkholderia mallei NCTC 10247	42	42	320389
strain	Rhizobium/Agrobacterium group	40	2	227290
strain	Mycoplasma cynos C142	40	40	1246955
strain	Escherichia coli 042	39	39	216592
strain	Mycoplasma hyopneumoniae 168-L	39	39	1116211
strain	Mycoplasma pulmonis UAB CTIP	38	38	272635
strain	Fusobacterium nucleatum subsp. nucleatum ATCC 25586	38	38	190304
strain	Neisseria meningitidis G2136	37	37	935599
strain	Neisseria meningitidis Z2491	35	35	122587
strain	Treponema denticola ATCC 35405	35	35	243275
strain	Lactobacillus crispatus ST1	34	34	748671
strain	Psychromonas ingrahamii 37	34	34	357804
strain	Helicobacter bizzozeronii CIII-1	34	34	1002804
strain	Trichodesmium erythraeum IMS101	33	33	203124
strain	Klebsiella pneumoniae JM45	33	33	1380908
strain	Rickettsia africae ESF-5	32	32	347255
strain	Haliangium ochraceum DSM 14365	32	32	502025
strain	Acinetobacter baumannii ACICU	32	32	405416
strain	Enterobacter asburiae LF7a	31	31	640513
strain	Corynebacterium diphtheriae HC02	30	30	698968
strain	Borrelia valaisiana VS116	30	30	445987
strain	Lactobacillus fermentum CECT 5716	29	29	712938
strain	Pseudomonas brassicacearum subsp. brassicacearum NFM421	29	29	994484
strain	Rhizobium leguminosarum bv. viciae 3841	27	27	216596
strain	Neisseria gonorrhoeae FA 1090	27	27	242231
strain	Citrobacter koseri ATCC BAA-895	26	26	290338
strain	Bacteroides helcogenes P 36-108	26	26	693979
strain	Selenomonas sputigena ATCC 35185	25	25	546271
strain	Corynebacterium maris DSM 45190	25	25	1224163
strain	Escherichia coli JJ1886	25	25	1355100
strain	Corynebacterium halotolerans YIM 70093 = DSM 44683	25	25	1121362
strain	Corynebacterium urealyticum DSM 7109	25	25	504474
strain	Capnocytophaga ochracea DSM 7271	25	25	521097
strain	Methanosarcina barkeri str. Fusaro	24	24	269797
strain	Escherichia coli SMS-3-5	23	23	439855
strain	Burkholderia mallei NCTC 10229	23	23	412022
strain	Pseudomonas putida HB3267	23	23	1215088
strain	Pseudomonas fluorescens F113	23	23	1114970
strain	Klebsiella pneumoniae 342	23	23	507522
strain	Neisseria meningitidis FAM18	23	23	272831
strain	Pseudomonas entomophila L48	21	21	384676
strain	Corynebacterium efficiens YS-314	21	21	196164
strain	Parachlamydia acanthamoebae UV-7	21	21	765952
strain	Finegoldia magna ATCC 29328	20	20	334413
strain	Geobacillus thermoleovorans CCB_US3_UF5	20	20	1111068
strain	Oscillatoria acuminata PCC 6304	19	19	56110
strain	Serratia proteamaculans 568	19	19	399741
strain	Enterococcus faecalis 62	19	19	936153
strain	Prevotella dentalis DSM 3688	19	19	908937
strain	Pseudomonas aeruginosa LESB58	19	19	557722
strain	Pseudomonas resinovorans NBRC 106553	19	19	1245471
strain	Serratia liquefaciens ATCC 27592	18	18	1346614
strain	Streptococcus intermedius C270	18	18	862966
strain	Cronobacter sakazakii SP291	18	18	956149
strain	Streptococcus intermedius B196	18	18	862967
strain	Yersinia enterocolitica subsp. palearctica 105.5R(r)	18	18	994476
strain	Caldicellulosiruptor saccharolyticus DSM 8903	17	17	351627
strain	Acinetobacter baumannii TCDC-AB0715	17	17	980514
strain	Staphylococcus aureus CA-347	17	17	1323661
strain	Porphyromonas gingivalis ATCC 33277	17	17	431947
strain	Corynebacterium callunae DSM 20147	17	17	1121353
strain	Mycoplasma ovis str. Michigan	17	17	1415773
strain	Candidatus Sulcia muelleri GWSS	16	16	444179
strain	Streptococcus pneumoniae 670-6B	16	16	189423
strain	Klebsiella variicola At-22	16	16	640131
strain	Neisseria gonorrhoeae NCCP11945	16	16	521006
strain	Bifidobacterium dentium Bd1	16	16	401473
strain	Streptococcus pneumoniae INV104	15	15	869269
strain	Bacillus infantis NRRL B-14911	15	15	1367477
strain	Propionibacterium propionicum F0230a	15	15	767029
strain	Pseudomonas syringae pv. syringae B728a	14	14	205918
strain	Roseburia hominis A2-183	14	14	585394
strain	Escherichia coli O127:H6 str. E2348/69	14	14	574521
strain	Burkholderiales Genera incertae sedis	14	2	224471
strain	Sodalis glossinidius str. 'morsitans'	14	14	343509
strain	Pyrolobus fumarii 1A	14	14	694429
strain	Burkholderia phymatum STM815	13	13	391038
strain	Polaromonas naphthalenivorans CJ2	13	13	365044
strain	Dickeya dadantii 3937	13	13	198628
strain	Candidatus Liberibacter solanacearum CLso-ZC1	13	13	658172
strain	Lactobacillus fermentum IFO 3956	13	13	334390
strain	Burkholderia ambifaria AMMD	12	12	339670
strain	Streptococcus agalactiae NEM316	12	12	211110
strain	Acinetobacter baumannii BJAB0715	12	12	1096996
strain	Pseudomonas fulva 12-X	12	12	743720
strain	Acinetobacter baumannii AB0057	12	12	480119
strain	Burkholderia cepacia GG4	12	12	1009846
strain	Salmonella enterica subsp. enterica serovar Heidelberg str. SL476	12	12	454169
strain	Burkholderia ambifaria MC40-6	12	12	398577
strain	Molluscum contagiosum virus subtype 1	11	11	10280
strain	Laribacter hongkongensis HLHK9	11	11	557598
strain	Candidatus Carsonella ruddii HC isolate Thao2000	11	11	1202538
strain	Burkholderia gladioli BSR3	11	11	999541
strain	Escherichia coli SE15	11	11	431946
strain	Cronobacter sakazakii CMCC 45402	11	11	1401659
strain	Candidatus Carsonella ruddii PV	11	11	387662
strain	Chromobacterium violaceum ATCC 12472	11	11	243365
strain	Acinetobacter calcoaceticus PHEA-2	11	11	871585
strain	Enterobacter lignolyticus SCF1	11	11	701347
strain	Corynebacterium diphtheriae INCA 402	11	11	698972
strain	Alicycliphilus denitrificans BC	11	11	596153
strain	Corynebacterium diphtheriae NCTC 13129	11	11	257309
strain	Arcanobacterium haemolyticum DSM 20595	11	11	644284
strain	Staphylococcus haemolyticus JCSC1435	11	11	279808
strain	Ramlibacter tataouinensis TTB310	10	10	365046
strain	Neisseria meningitidis NZ-05/33	10	10	935589
strain	Escherichia coli P12b	10	10	910348
strain	Pseudomonas putida W619	10	10	390235
strain	Streptococcus pneumoniae G54	10	10	512566
strain	Pseudomonas stutzeri CCUG 29243	10	10	1196835
strain	Corynebacterium diphtheriae CDCE 8392	10	10	698965
strain	Methanobrevibacter ruminantium M1	10	10	634498
strain	Dechlorosoma suillum PS	10	10	640081
strain	Pseudomonas mendocina ymp	10	10	399739
strain	Natronococcus occultus SP4	10	10	694430
strain	Dechloromonas aromatica RCB	10	10	159087
strain	Leptotrichia buccalis C-1013-b	10	10	523794
strain	Pseudoxanthomonas spadix BD-a59	10	10	1045855
strain	Comamonas testosteroni CNB-2	10	10	688245
strain	Escherichia coli ED1a	9	9	585397
strain	Corynebacterium diphtheriae BH8	9	9	698973
strain	Acinetobacter baumannii MDR-ZJ06	9	9	497978
strain	Mycoplasma hyorhinis MCLD	9	9	936139
strain	Candidatus Endolissoclinum faulkneri L2	9	9	1193729
strain	Klebsiella oxytoca E718	9	9	1191061
strain	Escherichia coli 536	9	9	362663
strain	Sorangium cellulosum So0157-2	9	9	1254432
strain	Neisseria meningitidis H44/76	9	9	909420
strain	Pseudomonas protegens Pf-5	9	9	220664
strain	Kytococcus sedentarius DSM 20547	9	9	478801
strain	Pseudomonas syringae pv. tomato str. DC3000	9	9	223283
strain	Acinetobacter baumannii D1279779	9	9	945556
strain	Pseudoxanthomonas suwonensis 11-1	9	9	743721
strain	Streptococcus pneumoniae ATCC 700669	9	9	561276
strain	Streptococcus intermedius JTH08	9	9	591365
strain	Enterobacter aerogenes EA1509E	9	9	935296
strain	Bordetella petrii DSM 12804	9	9	340100
strain	Escherichia fergusonii ATCC 35469	8	8	585054
strain	Ralstonia solanacearum CMR15	8	8	859655
strain	Streptococcus pneumoniae CGSP14	8	8	516950
strain	Burkholderia multivorans ATCC 17616	8	8	395019
strain	Pseudomonas mendocina NK-01	8	8	1001585
strain	Bifidobacterium breve UCC2003	8	8	326426
strain	Corynebacterium argentoratense DSM 44202	8	8	1348662
strain	Pseudomonas protegens CHA0	8	8	1124983
strain	Achromobacter xylosoxidans A8	8	8	762376
strain	Candidatus Zinderia insecticola CARI	8	8	871271
strain	Staphylococcus aureus subsp. aureus USA300	8	8	367830
strain	Pseudomonas denitrificans ATCC 13867	8	8	1294143
strain	Lactobacillus johnsonii FI9785	8	8	633699
strain	Acinetobacter baumannii BJAB0868	8	8	1096997
strain	Bacillus cereus Q1	8	8	361100
strain	Methanolobus psychrophilus R15	8	8	1094980
strain	Burkholderia vietnamiensis G4	8	8	269482
strain	Corynebacterium variabile DSM 44702	8	8	858619
strain	Escherichia coli PMV-1	8	8	1382700
strain	Corynebacterium terpenotabidum Y-11	8	8	1200352
strain	Streptococcus pneumoniae SPNA45	8	8	869309
strain	Pseudomonas stutzeri RCH2	8	8	644801
strain	Dickeya dadantii Ech586	8	8	590409
strain	Staphylococcus aureus subsp. aureus CN1	8	8	1193576
strain	Natrialba magadii ATCC 43099	8	8	547559
strain	Acinetobacter baumannii ZW85-1	8	8	1400867
strain	Burkholderia phytofirmans PsJN	7	7	398527
strain	Bifidobacterium breve ACS-071-V-Sch8b	7	7	866777
strain	Porphyromonas asaccharolytica DSM 20707	7	7	879243
strain	Advenella kashmirensis WT001	7	7	1036672
strain	Streptomyces cattleya NRRL 8057 = DSM 46488	7	7	1003195
strain	Helicobacter pylori J99	7	7	85963
strain	Streptococcus pneumoniae 70585	7	7	488221
strain	Citrobacter rodentium ICC168	7	7	637910
strain	Cellulophaga algicola DSM 14237	7	7	688270
strain	Xanthomonas albilineans GPE PC73	7	7	380358
strain	Mycoplasma genitalium M6282	7	7	662946
strain	Streptococcus dysgalactiae subsp. equisimilis RE378	7	7	617121
strain	Pseudomonas stutzeri A1501	7	7	379731
strain	Porphyromonas gingivalis W83	6	6	242619
strain	Yersinia pseudotuberculosis IP 31758	6	6	349747
strain	Oscillatoria nigro-viridis PCC 7112	6	6	179408
strain	Sulfuricella denitrificans skB26	6	6	1163617
strain	Sideroxydans lithotrophicus ES-1	6	6	580332
strain	Microbacterium testaceum StLB037	6	6	979556
strain	Bacillus thuringiensis YBT-1518	6	6	529122
strain	Cupriavidus taiwanensis LMG 19424	6	6	977880
strain	Pseudomonas stutzeri DSM 10701	6	6	1123519
strain	Bacteroides vulgatus ATCC 8482	6	6	435590
strain	Bordetella avium 197N	6	6	360910
strain	Klebsiella pneumoniae subsp. pneumoniae 1084	6	6	1193292
strain	Bifidobacterium longum subsp. longum JDM301	6	6	759350
strain	Prochlorococcus marinus str. MIT 9215	6	6	93060
strain	Candidatus Accumulibacter phosphatis clade IIA str. UW-1	6	6	522306
strain	Bacteroides fragilis 638R	6	6	862962
strain	Cryptobacterium curtum DSM 15641	6	6	469378
strain	Caldicellulosiruptor bescii DSM 6725	6	6	521460
strain	Pseudomonas putida GB-1	6	6	76869
strain	Lactobacillus sakei subsp. sakei 23K	6	6	314315
strain	Pseudoalteromonas haloplanktis TAC125	6	6	326442
strain	Bacteroides fragilis NCTC 9343	6	6	272559
strain	Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633	6	6	439843
strain	Burkholderia xenovorans LB400	6	6	266265
strain	Lactobacillus paracasei subsp. paracasei 8700:2	6	6	537973
strain	Pseudomonas putida NBRC 14164	6	6	1211579
strain	Nocardia farcinica IFM 10152	6	6	247156
strain	Bacteroides fragilis YCH46	6	6	295405
strain	Erwinia billingiae Eb661	6	6	634500
strain	Candidatus Carsonella ruddii CS isolate Thao2000	6	6	1202537
strain	Ralstonia solanacearum PSI07	6	6	859657
strain	Serratia symbiotica str. 'Cinara cedri'	6	6	568817
strain	Methanococcoides burtonii DSM 6242	6	6	259564
strain	Acinetobacter baumannii SDF	6	6	509170
strain	Streptococcus pneumoniae INV200	6	6	869216
strain	Leptothrix cholodnii SP-6	5	5	395495
strain	Burkholderia thailandensis MSMB121	5	5	1249661
strain	Alcanivorax dieselolei B5	5	5	930169
strain	Alistipes shahii WAL 8301	5	5	717959
strain	Corynebacterium kroppenstedtii DSM 44385	5	5	645127
strain	Escherichia coli ETEC H10407	5	5	316401
strain	Cupriavidus metallidurans CH34	5	5	266264
strain	Mycoplasma conjunctivae HRC/581	5	5	572263
strain	Methanococcus aeolicus Nankai-3	5	5	419665
strain	Staphylococcus aureus subsp. aureus str. JKD6008	5	5	546342
strain	Pelodictyon phaeoclathratiforme BU-1	5	5	324925
strain	Tsukamurella paurometabola DSM 20162	5	5	521096
strain	Lactobacillus rhamnosus ATCC 8530	5	5	1088720
strain	Methanothermococcus okinawensis IH1	5	5	647113
strain	Shigella boydii CDC 3083-94	5	5	344609
strain	Burkholderia cenocepacia HI2424	5	5	331272
strain	Lactobacillus ruminis ATCC 27782	5	5	1069534
strain	Streptococcus pneumoniae JJA	5	5	488222
strain	Leisingera methylohalidivorans DSM 14336	5	5	999552
strain	Porphyromonas gingivalis TDC60	5	5	1030843
strain	Corynebacterium diphtheriae VA01	5	5	698971
strain	Serratia plymuthica S13	5	5	1348660
strain	Escherichia coli HS	5	5	331112
strain	Nocardia cyriacigeorgica GUH-2	5	5	1127134
strain	Caldicellulosiruptor kronotskyensis 2002	5	5	632348
strain	Streptococcus lutetiensis 033	5	5	1076934
strain	Borrelia crocidurae str. Achema	5	5	1155096
strain	Ralstonia solanacearum CFBP2957	5	5	859656
strain	Cupriavidus necator N-1	5	5	1042878
strain	Dickeya zeae Ech1591	5	5	561229
strain	Olsenella uli DSM 7084	5	5	633147
strain	Streptococcus pneumoniae P1031	5	5	488223
strain	Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044	4	4	484021
strain	Saccharothrix espanaensis DSM 44229	4	4	1179773
strain	Corynebacterium diphtheriae C7 (beta)	4	4	698963
strain	Streptomyces bingchenggensis BCW-1	4	4	749414
strain	Neisseria meningitidis M01-240149	4	4	935591
strain	Edwardsiella ictaluri 93-146	4	4	634503
strain	Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1	4	4	1048834
strain	Mycoplasma arthritidis 158L3-1	4	4	243272
strain	Rhodococcus equi 103S	4	4	685727
strain	Streptococcus equi subsp. equi 4047	4	4	553482
strain	Enterobacter aerogenes KCTC 2190	4	4	1028307
strain	Burkholderia glumae BGR1	4	4	626418
strain	Alistipes finegoldii DSM 17242	4	4	679935
strain	Coprococcus catus GD/7	4	4	717962
strain	Acinetobacter baumannii TYTH-1	4	4	1100841
strain	Serratia plymuthica 4Rx13	4	4	682634
strain	Streptococcus infantarius subsp. infantarius CJ18	4	4	1069533
strain	Candidatus Carsonella ruddii PC isolate NHV	4	4	1202540
strain	Lactobacillus casei str. Zhang	4	4	498216
strain	Streptococcus pneumoniae ST556	4	4	1130804
strain	Escherichia coli O111:H- str. 11128	4	4	585396
strain	Enterococcus faecium Aus0085	4	4	1305849
strain	Corynebacterium diphtheriae 31A	4	4	698962
strain	Acidovorax citrulli AAC00-1	4	4	397945
strain	Staphylococcus aureus subsp. aureus ECT-R 2	4	4	889933
strain	Nitrosomonas europaea ATCC 19718	4	4	228410
strain	Xanthomonas campestris pv. campestris	4	4	340
strain	Anaerococcus prevotii DSM 20548	4	4	525919
strain	Pseudomonas putida H8234	4	4	1331671
strain	Monkeypox virus Zaire-96-I-16	4	4	619591
strain	Enterococcus faecalis D32	4	4	1206105
strain	Raoultella ornithinolytica B6	4	4	1286170
strain	Mannheimia haemolytica USDA-ARS-USMARC-185	4	4	1249526
strain	Lactobacillus delbrueckii subsp. bulgaricus ND02	4	4	767455
strain	Methylobacterium nodulans ORS 2060	4	4	460265
strain	Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2	4	4	511995
strain	Beijerinckia indica subsp. indica ATCC 9039	4	4	395963
strain	Geodermatophilus obscurus DSM 43160	4	4	526225
strain	Rhodospirillum centenum SW	4	4	414684
strain	Escherichia coli CFT073	4	4	199310
strain	Stigmatella aurantiaca DW4/3-1	4	4	378806
strain	Albidiferax ferrireducens T118	4	4	338969
strain	Streptococcus agalactiae ILRI005	4	4	1309807
strain	Streptococcus dysgalactiae subsp. equisimilis AC-2713	4	4	759913
strain	Ralstonia eutropha H16	4	4	381666
strain	Erwinia tasmaniensis Et1/99	4	4	465817
strain	Streptomyces venezuelae ATCC 10712	4	4	953739
strain	Acinetobacter oleivorans DR1	4	4	436717
strain	Streptococcus thermophilus LMD-9	4	4	322159
strain	Halovivax ruber XH-70	4	4	797302
strain	Tropheryma whipplei TW08/27	4	4	218496
strain	Lactobacillus salivarius CECT 5713	4	4	712961
strain	Actinobacillus suis H91-0380	4	4	696748
strain	Arthrospira platensis NIES-39	4	4	696747
strain	Beutenbergia cavernae DSM 12333	4	4	471853
strain	Bibersteinia trehalosi USDA-ARS-USMARC-192	4	4	1171377
strain	Clostridium difficile 630	4	4	272563
strain	Variovorax paradoxus B4	4	4	1246301
strain	Haemophilus parasuis SH0165	3	3	557723
strain	Bifidobacterium asteroides PRL2011	3	3	1147128
strain	Bacteroides salanitronis DSM 18170	3	3	667015
strain	Parvibaculum lavamentivorans DS-1	3	3	402881
strain	Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111	3	3	446468
strain	Methylobacterium radiotolerans JCM 2831	3	3	426355
strain	Acidithiobacillus ferrivorans SS3	3	3	743299
strain	Tropheryma whipplei str. Twist	3	3	203267
strain	Catenulispora acidiphila DSM 44928	3	3	479433
strain	Pseudomonas stutzeri DSM 4166	3	3	996285
strain	Arthrobacter chlorophenolicus A6	3	3	452863
strain	Clostridiales genomosp. BVAB3 str. UPII9-5	3	3	699246
strain	Ilyobacter polytropus DSM 2926	3	3	572544
strain	Escherichia coli O26:H11 str. 11368	3	3	573235
strain	Corynebacterium urealyticum DSM 7111	3	3	1267754
strain	Methanocella conradii HZ254	3	3	1041930
strain	Escherichia coli O55:H7	3	2	244320
strain	Paenibacillus mucilaginosus 3016	3	3	1116391
strain	Ruegeria pomeroyi DSS-3	3	3	246200
strain	Ralstonia pickettii 12J	3	3	402626
strain	Enterococcus faecalis str. Symbioflor 1	3	3	1261557
strain	Lactobacillus casei ATCC 334	3	3	321967
strain	Shigella flexneri 2002017	3	3	591020
strain	Clostridium botulinum E3 str. Alaska E43	3	3	508767
strain	Streptococcus equi subsp. zooepidemicus ATCC 35246	3	3	1051072
strain	Odoribacter splanchnicus DSM 220712	3	3	709991
strain	Halomonas elongata DSM 2581	3	3	768066
strain	Pedobacter saltans DSM 12145	3	3	762903
strain	Streptococcus suis ST1	3	3	1004951
strain	Corynebacterium diphtheriae HC04	3	3	698970
strain	Frankia alni ACN14a	3	3	326424
strain	Rhodospirillum photometricum DSM 122	3	3	1150469
strain	Thermacetogenium phaeum DSM 12270	3	3	1089553
strain	Pseudomonas putida KT2440	3	3	160488
strain	Rubrivivax gelatinosus IL144	3	3	983917
strain	Streptococcus iniae SF1	3	3	1318633
strain	Borrelia recurrentis A1	3	3	412418
strain	Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7	3	3	1016998
strain	Bacillus cereus E33L	3	3	288681
strain	Pseudomonas putida S16	3	3	1042876
strain	Cardinium endosymbiont cEper1 of Encarsia pergandiella	3	3	1231626
strain	Streptococcus parauberis KCTC 11537	3	3	936154
strain	Shimwellia blattae DSM 4481 = NBRC 105725	3	3	630626
strain	Lactobacillus casei LOCK919	3	3	1318635
strain	Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)	3	3	572265
strain	Arthrobacter phenanthrenivorans Sphe3	3	3	930171
strain	Chamaesiphon minutus PCC 6605	3	3	1173020
strain	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	3	3	525146
strain	Variovorax paradoxus S110	3	3	543728
strain	Amycolicicoccus subflavus DQS3-9A1	3	3	443218
strain	Clostridium perfringens SM101	3	3	289380
strain	Microcystis aeruginosa NIES-843	3	3	449447
strain	Rhizobium leguminosarum bv. trifolii WSM1325	3	3	395491
strain	Salmonella enterica subsp. enterica serovar Newport	3	1	108619
strain	Acinetobacter baumannii AB307-0294	3	3	557600
strain	Gardnerella vaginalis ATCC 14019	3	3	525284
strain	Chlamydia pecorum W73	3	3	1234368
strain	Candidatus Portiera aleyrodidarum BT-B-HRs	3	3	1206109
strain	Mycoplasma hyorhinis GDL-1	3	3	1129369
strain	Variovorax paradoxus EPS	3	3	595537
strain	Escherichia coli NA114	3	3	1033813
strain	Candidatus Sulcia muelleri SMDSEM	3	3	595499
strain	Lactobacillus rhamnosus LOCK908	3	3	1318634
strain	Lactobacillus acidophilus 30SC	3	3	891391
strain	Streptomyces scabiei 87.22	3	3	680198
strain	Escherichia coli Xuzhou21	3	3	741093
strain	Candidatus Carsonella ruddii CE isolate Thao2000	3	3	1202536
strain	Francisella tularensis subsp. holarctica OSU18	3	3	393011
strain	Nostoc punctiforme PCC 73102	3	3	63737
strain	Yersinia pseudotuberculosis YPIII	3	3	502800
strain	Mycobacterium chubuense NBB4	3	3	710421
strain	Bacteroides xylanisolvens XB1A	3	3	657309
strain	Aerococcus urinae ACS-120-V-Col10a	3	3	866775
strain	Haloferax mediterranei ATCC 33500	3	3	523841
strain	Nocardia brasiliensis ATCC 700358	2	2	1133849
strain	Crinalium epipsammum PCC 9333	2	2	1173022
strain	Rhodobacter capsulatus SB 1003	2	2	272942
strain	Methylobacterium extorquens AM1	2	2	272630
strain	Influenza A virus (A/New York/392/2004(H3N2))	2	2	335341
strain	Nitrobacter hamburgensis X14	2	2	323097
strain	Micavibrio aeruginosavorus EPB	2	2	349215
strain	Vibrio campbellii ATCC BAA-1116	2	2	338187
strain	Xanthomonas campestris pv. raphani 756C	2	2	990315
strain	Streptomyces davawensis JCM 4913	2	2	1214101
strain	Azospirillum sp. B510	2	2	137722
strain	Methanosarcina mazei Tuc01	2	2	1236903
strain	Carnobacterium maltaromaticum LMA28	2	2	1234679
strain	Pectobacterium carotovorum subsp. carotovorum PC1	2	2	561230
strain	Rhodopseudomonas palustris BisB5	2	2	316057
strain	Streptococcus pneumoniae SPN034156	2	2	869303
strain	Streptococcus macedonicus ACA-DC 198	2	2	1116231
strain	Paracoccus aminophilus JCM 7686	2	2	1367847
strain	Mycobacterium rhodesiae NBB3	2	2	710685
strain	Lactobacillus salivarius UCC118	2	2	362948
strain	Cylindrospermum stagnale PCC 7417	2	2	56107
strain	Hyphomicrobium denitrificans 1NES1	2	2	670307
strain	Shewanella amazonensis SB2B	2	2	326297
strain	Burkholderia thailandensis E264	2	2	271848
strain	Spiroplasma diminutum CUAS-1	2	2	1276221
strain	Oscillibacter valericigenes Sjm18-20	2	2	693746
strain	Escherichia coli O103:H2 str. 12009	2	2	585395
strain	Eubacterium eligens ATCC 27750	2	2	515620
strain	Mycobacterium yongonense 05-1390	2	2	1138871
strain	Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821	2	2	264203
strain	Haloquadratum walsbyi DSM 16790	2	2	362976
strain	Streptococcus mutans NN2025	2	2	511691
strain	Rhodopseudomonas palustris BisB18	2	2	316056
strain	Methanoculleus bourgensis MS2	2	2	1201294
strain	Pantoea vagans C9-1	2	2	712898
strain	Bifidobacterium longum subsp. longum BBMN68	2	2	890402
strain	[Cellvibrio] gilvus ATCC 13127	2	2	593907
strain	Clostridium difficile BI9	2	2	699032
strain	Aggregatibacter actinomycetemcomitans D7S-1	2	2	694569
strain	Methanosarcina mazei Go1	2	2	192952
strain	Paracoccus denitrificans PD1222	2	2	318586
strain	Desulfobulbus propionicus DSM 2032	2	2	577650
strain	'Nostoc azollae' 0708	2	2	551115
strain	Sinorhizobium fredii USDA 257	2	2	1185652
strain	Mesotoga prima MesG1.Ag.4.2	2	2	660470
strain	Salmonella enterica subsp. enterica serovar Cubana str. CFSAN002050	2	2	1271863
strain	Methylobacterium extorquens CM4	2	2	440085
strain	Alkaliphilus metalliredigens QYMF	2	2	293826
strain	Weeksella virosa DSM 16922	2	2	865938
strain	Xylanimonas cellulosilytica DSM 15894	2	2	446471
strain	Streptococcus pyogenes M1 GAS	2	2	160490
strain	Staphylococcus aureus 04-02981	2	2	703339
strain	Salmonella enterica subsp. enterica serovar Heidelberg str. 41578	2	2	1124936
strain	Streptococcus pyogenes NZ131	2	2	471876
strain	Mahella australiensis 50-1 BON	2	2	697281
strain	Streptococcus pneumoniae gamPNI0373	2	2	697283
strain	Pantoea ananatis AJ13355	2	2	932677
strain	Bacillus coagulans 2-6	2	2	941639
strain	Marivirga tractuosa DSM 4126	2	2	643867
strain	Methanosarcina acetivorans C2A	2	2	188937
strain	Kangiella koreensis DSM 16069	2	2	523791
strain	Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023	2	2	627343
strain	Campylobacter curvus 525.92	2	2	360105
strain	Cellvibrio japonicus Ueda107	2	2	498211
strain	Macrococcus caseolyticus JCSC5402	2	2	458233
strain	Leptospira interrogans serovar Lai str. 56601	2	2	189518
strain	Lactobacillus buchneri NRRL B-30929	2	2	511437
strain	Mobiluncus curtisii ATCC 43063	2	2	548479
strain	Lysinibacillus sphaericus C3-41	2	2	444177
strain	Bradyrhizobium oligotrophicum S58	2	2	1245469
strain	Staphylococcus warneri SG1	2	2	1194526
strain	Conexibacter woesei DSM 14684	2	2	469383
strain	Lactobacillus amylovorus GRL 1112	2	2	695560
strain	Brachyspira pilosicoli P43/6/78	2	2	1042417
strain	Ralstonia pickettii 12D	2	2	428406
strain	Enterococcus hirae ATCC 9790	2	2	768486
strain	Mannheimia haemolytica D171	2	2	1311759
strain	Streptococcus pasteurianus ATCC 43144	2	2	981540
strain	Zymomonas mobilis subsp. mobilis NCIMB 11163	2	2	622759
strain	Bifidobacterium longum DJO10A	2	2	205913
strain	Propionibacterium acidipropionici ATCC 4875	2	2	1171373
strain	Faecalibacterium prausnitzii L2-6	2	2	718252
strain	Escherichia coli SE11	2	2	409438
strain	Thermomonospora curvata DSM 43183	2	2	471852
strain	Xanthomonas oryzae pv. oryzae	2	2	64187
strain	Escherichia coli UMNK88	2	2	696406
strain	Aeromonas salmonicida subsp. salmonicida A449	2	2	382245
strain	Streptococcus pneumoniae AP200	2	2	574093
strain	Marinobacter adhaerens HP15	2	2	225937
strain	Gallionella capsiferriformans ES-2	2	2	395494
strain	Roseiflexus castenholzii DSM 13941	2	2	383372
strain	Aster yellows witches'-broom phytoplasma AYWB	2	2	322098
strain	Salmonella enterica subsp. arizonae serovar 62:z4,z23:- str. RSK2980	2	2	882884
strain	Mycoplasma mycoides subsp. mycoides SC str. PG1	2	2	272632
strain	Burkholderia rhizoxinica HKI 454	2	2	882378
strain	Rhodococcus jostii RHA1	2	2	101510
strain	Brachybacterium faecium DSM 4810	2	2	446465
strain	Leuconostoc gelidum JB7	2	2	1229756
strain	Escherichia coli IHE3034	2	2	714962
strain	Ralstonia solanacearum GMI1000	2	2	267608
strain	Chlorobium tepidum TLS	2	2	194439
strain	Ralstonia eutropha JMP134	2	2	264198
strain	Methylibium petroleiphilum PM1	2	2	420662
strain	Streptococcus pyogenes MGAS10750	2	2	370554
strain	Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088	2	2	391904
strain	Candidatus Nasuia deltocephalinicola str. NAS-ALF	2	2	1343077
strain	Lactobacillus rhamnosus Lc 705	2	2	568704
strain	Desulfotomaculum acetoxidans DSM 771	2	2	485916
strain	Arthrobacter arilaitensis Re117	2	2	861360
strain	Lactobacillus johnsonii DPC 6026	2	2	909954
strain	Lactococcus lactis subsp. cremoris A76	2	2	1104322
strain	Burkholderia pseudomallei 668	2	2	320373
strain	Bacillus subtilis BSn5	2	2	936156
strain	Salmonella enterica subsp. enterica serovar Newport str. SL254	2	2	423368
strain	Cronobacter turicensis z3032	2	2	693216
strain	Streptococcus suis SS12	2	2	1005041
strain	Ignavibacterium album JCM 16511	2	2	945713
strain	Candidatus Hodgkinia cicadicola Dsem	2	2	573234
strain	Streptococcus pneumoniae TCH8431/19A	2	2	525381
strain	Xanthomonas oryzae pv. oryzicola BLS256	2	2	383407
strain	Streptococcus pneumoniae Taiwan19F-14	2	2	487213
strain	Gardnerella vaginalis 409-05	2	2	553190
strain	Agrobacterium fabrum str. C58	2	2	176299
strain	Nitrobacter winogradskyi Nb-255	2	2	323098
strain	Helicobacter hepaticus ATCC 51449	1	1	235279
strain	Streptomyces rapamycinicus NRRL 5491	1	1	1343740
strain	Streptococcus agalactiae ILRI112	1	1	1318615
strain	Streptococcus suis TL13	1	1	1276647
strain	Methylomicrobium alcaliphilum 20Z	1	1	1091494
strain	Aeromonas veronii B565	1	1	998088
strain	Enterococcus mundtii QU 25	1	1	1300150
strain	Nitratifractor salsuginis DSM 16511	1	1	749222
strain	Propionibacterium acnes HL096PA1	1	1	1134454
strain	Methylobacterium populi BJ001	1	1	441620
strain	Fibrella aestuarina BUZ 2	1	1	1166018
strain	Salmonella enterica subsp. enterica serovar Typhimurium	1	1	90371
strain	Burkholderia pseudomallei NCTC 13179	1	1	1241583
strain	Mycobacterium smegmatis str. MC2 155	1	1	246196
strain	Polynucleobacter necessarius subsp. necessarius STIR1	1	1	452638
strain	Phycisphaera mikurensis NBRC 102666	1	1	1142394
strain	Sphaerobacter thermophilus DSM 20745	1	1	479434
strain	Borrelia bissettii DN127	1	1	521010
strain	Pseudonocardia dioxanivorans CB1190	1	1	675635
strain	Streptococcus pneumoniae TIGR4	1	1	170187
strain	Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853	1	1	439851
strain	Rhodopseudomonas palustris HaA2	1	1	316058
strain	Mycoplasma hominis ATCC 23114	1	1	347256
strain	Prevotella ruminicola 23	1	1	264731
strain	Lactobacillus reuteri SD2112	1	1	491077
strain	Amycolatopsis orientalis HCCB10007	1	1	1156913
strain	Prochlorococcus marinus str. MIT 9312	1	1	74546
strain	Ureaplasma urealyticum serovar 10 str. ATCC 33699	1	1	565575
strain	Mycoplasma penetrans HF-2	1	1	272633
strain	Terriglobus roseus DSM 18391	1	1	926566
strain	Lactobacillus plantarum subsp. plantarum P-8	1	1	767468
strain	Escherichia coli APEC O78	1	1	1274814
strain	Caulobacter crescentus CB15	1	1	190650
strain	Kocuria rhizophila DC2201	1	1	378753
strain	Salmonella enterica subsp. enterica serovar Enteritidis str. P125109	1	1	550537
strain	Escherichia coli ABU 83972	1	1	655817
strain	Lawsonia intracellularis PHE/MN1-00	1	1	363253
strain	Micromonospora aurantiaca ATCC 27029	1	1	644283
strain	Mycoplasma gallisepticum WI01_2001.043-13-2P	1	1	1159201
strain	Megamonas hypermegale ART12/1	1	1	657316
strain	Flavobacterium branchiophilum FL-15	1	1	1034807
strain	Listonella anguillarum serovar O1	1	1	42323
strain	Sinorhizobium medicae WSM419	1	1	366394
strain	Thiocystis violascens DSM 198	1	1	765911
strain	Burkholderia pseudomallei MSHR346	1	1	536230
strain	Jonesia denitrificans DSM 20603	1	1	471856
strain	Bacillus cereus ATCC 10987	1	1	222523
strain	Mycobacterium tuberculosis CAS/NITR204	1	1	1310114
strain	Kineococcus radiotolerans SRS30216 = ATCC BAA-149	1	1	266940
strain	Yersinia pestis Antiqua	1	1	360102
strain	Saccharopolyspora erythraea NRRL 2338	1	1	405948
strain	Methylomonas methanica MC09	1	1	857087
strain	Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)	1	1	713602
strain	Micrococcus luteus NCTC 2665	1	1	465515
strain	Streptobacillus moniliformis DSM 12112	1	1	519441
strain	Mesorhizobium loti MAFF303099	1	1	266835
strain	Eggerthella lenta DSM 2243	1	1	479437
strain	Staphylococcus aureus subsp. aureus JKD6159	1	1	869816
strain	Planctomyces limnophilus DSM 3776	1	1	521674
strain	Corynebacterium diphtheriae HC03	1	1	698969
strain	Propionibacterium acnes ATCC 11828	1	1	1091045
strain	Ralstonia solanacearum Po82	1	1	1031711
strain	Xanthomonas campestris pv. vesicatoria str. 85-10	1	1	316273
strain	Candidatus Carsonella ruddii DC	1	1	667013
strain	Shigella dysenteriae Sd197	1	1	300267
strain	Haemophilus somnus 2336	1	1	228400
strain	Rahnella aquatilis CIP 78.65 = ATCC 33071	1	1	745277
strain	Caldicellulosiruptor kristjanssonii I77R1B	1	1	632335
strain	Deinococcus deserti VCD115	1	1	546414
strain	Sanguibacter keddieii DSM 10542	1	1	446469
strain	Streptomyces violaceusniger Tu 4113	1	1	653045
strain	Cyanobium gracile PCC 6307	1	1	292564
strain	Helicobacter cinaedi PAGU611	1	1	1172562
strain	Xylella fastidiosa M12	1	1	405440
strain	Escherichia coli O7:K1 str. CE10	1	1	1072459
strain	Pseudomonas stutzeri ATCC 17588 = LMG 11199	1	1	96563
strain	Thiomonas intermedia K12	1	1	75379
strain	Bdellovibrio exovorus JSS	1	1	1184267
strain	Renibacterium salmoninarum ATCC 33209	1	1	288705
strain	Escherichia coli O55:H7 str. RM12579	1	1	1048689
strain	Streptococcus suis GZ1	1	1	423211
strain	Sphingobium japonicum UT26S	1	1	452662
strain	Pasteurella multocida subsp. multocida str. 3480	1	1	584721
strain	Sinorhizobium fredii NGR234	1	1	394
strain	Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1	1	1	754252
strain	Caulobacter segnis ATCC 21756	1	1	509190
strain	Dickeya dadantii Ech703	1	1	579405
strain	Bradyrhizobium diazoefficiens USDA 110	1	1	224911
strain	Streptococcus suis T15	1	1	1340847
strain	Butyrivibrio proteoclasticus B316	1	1	515622
strain	Escherichia coli E24377A	1	1	331111
strain	Bacillus subtilis subsp. subtilis str. BSP1	1	1	1192196
strain	Desulfococcus oleovorans Hxd3	1	1	96561
strain	Haemophilus ducreyi 35000HP	1	1	233412
strain	Kribbella flavida DSM 17836	1	1	479435
strain	Glaciecola nitratireducens FR1064	1	1	1085623
strain	Pectobacterium carotovorum subsp. carotovorum PCC21	1	1	1218933
strain	Bifidobacterium thermophilum RBL67	1	1	1254439
strain	Stackebrandtia nassauensis DSM 44728	1	1	446470
strain	Microlunatus phosphovorus NM-1	1	1	1032480
strain	Clostridium saccharoperbutylacetonicum N1-4(HMT)	1	1	931276
strain	Bacillus weihenstephanensis KBAB4	1	1	315730
strain	Cellulomonas fimi ATCC 484	1	1	590998
strain	Ruminococcus bromii L2-63	1	1	657321
strain	Capnocytophaga canimorsus Cc5	1	1	860228
strain	Streptomyces coelicolor A3(2)	1	1	100226
strain	Nakamurella multipartita DSM 44233	1	1	479431
strain	Salmonella enterica subsp. enterica serovar Agona	1	1	58095
strain	Acinetobacter baumannii BJAB07104	1	1	1096995
strain	Chitinophaga pinensis DSM 2588	1	1	485918
strain	Sebaldella termitidis ATCC 33386	1	1	526218
strain	Staphylococcus aureus subsp. aureus HO 5096 0412	1	1	1074252
strain	Rhodobacter sphaeroides ATCC 17029	1	1	349101
strain	Geobacter uraniireducens Rf4	1	1	351605
strain	Dyadobacter fermentans DSM 18053	1	1	471854
strain	Bacillus cytotoxicus NVH 391-98	1	1	315749
strain	Isoptericola variabilis 225	1	1	743718
strain	Pseudomonas aeruginosa PA1	1	1	1279007
strain	Photorhabdus luminescens subsp. laumondii TTO1	1	1	243265
strain	Desulfovibrio alaskensis G20	1	1	207559
strain	Streptococcus suis D12	1	1	1004952
strain	Candidatus Pelagibacter ubique HTCC1062	1	1	335992
strain	Halorhodospira halophila SL1	1	1	349124
strain	Methylobacterium extorquens DM4	1	1	661410
strain	Human herpesvirus 4 type 2	1	1	12509
strain	Lumpy skin disease virus NI-2490	1	1	376849
strain	Gluconacetobacter medellinensis NBRC 3288	1	1	634177
strain	Mycoplasma suis str. Illinois	1	1	768700
strain	Bartonella clarridgeiae 73	1	1	696125
strain	Cyanobacterium stanieri PCC 7202	1	1	292563
strain	Salinispora arenicola CNS-205	1	1	391037
strain	Mycobacterium canettii CIPT 140070008	1	1	1205675
strain	Ornithobacterium rhinotracheale DSM 15997	1	1	867902
strain	Bacillus subtilis subsp. natto BEST195	1	1	645657
strain	Buchnera aphidicola (Cinara tujafilina)	1	1	261317
strain	Bifidobacterium bifidum BGN4	1	1	484020
strain	Actinobacillus succinogenes 130Z	1	1	339671
strain	Candidatus Carsonella ruddii HT isolate Thao2000	1	1	1202539
strain	Asticcacaulis excentricus CB 48	1	1	573065
strain	Mycobacterium abscessus subsp. bolletii str. GO 06	1	1	1198627
strain	Streptococcus uberis 0140J	1	1	218495
strain	Desulfovibrio africanus str. Walvis Bay	1	1	690850
strain	Rhodopseudomonas palustris TIE-1	1	1	395960
strain	Corynebacterium glutamicum R	1	1	340322
strain	Borrelia burgdorferi JD1	1	1	521008
strain	Actinoplanes friuliensis DSM 7358	1	1	1246995
strain	Salmonella enterica subsp. enterica serovar Typhi	1	1	90370
strain	Methanobrevibacter smithii ATCC 35061	1	1	420247
strain	Magnetospirillum gryphiswaldense MSR-1 v2	1	1	1430440
strain	Nitrosomonas eutropha C91	1	1	335283
strain	Sorangium cellulosum So ce56	1	1	448385
strain	Enterococcus casseliflavus EC20	1	1	565655
strain	Brachyspira murdochii DSM 12563	1	1	526224
strain	Leadbetterella byssophila DSM 17132	1	1	649349
strain	Streptococcus dysgalactiae subsp. equisimilis GGS_124	1	1	486410
strain	Hahella chejuensis KCTC 2396	1	1	349521
strain	Shewanella loihica PV-4	1	1	323850
strain	Polymorphum gilvum SL003B-26A1	1	1	991905
strain	Geobacillus thermoglucosidasius C56-YS93	1	1	634956
no rank	cellular organisms	734644	320	131567
no rank	ssDNA viruses	43199	0	29258
no rank	dsDNA viruses, no RNA stage	3753	9	35237
no rank	unclassified Betabaculovirus	93	0	342107
no rank	ssRNA viruses	42	0	439488
no rank	unclassified Gammaproteobacteria	40	0	118884
no rank	unclassified Siphoviridae	34	2	196894
no rank	ssRNA positive-strand viruses, no DNA stage	28	0	35278
no rank	Clostridiales incertae sedis	24	0	538999
no rank	unclassified Micrococcineae	22	0	577468
no rank	ssRNA negative-strand viruses	14	0	35301
no rank	unclassified Burkholderiales	14	0	119065
no rank	unclassified Ascovirus	14	0	328613
no rank	unassigned Betaherpesvirinae	11	0	686603
no rank	unclassified Betaproteobacteria	9	0	119066
no rank	unclassified Lambda-like viruses	7	0	335795
no rank	unassigned Podoviridae	6	0	686602
no rank	unclassified Alphaproteobacteria	5	0	82117
no rank	Enterobacteria phage G4 clade	5	0	374842
no rank	unclassified Myoviridae	4	0	196896
no rank	unclassified Mononegavirales	4	0	644608
no rank	unclassified Bacteroidetes	3	0	171558
no rank	Bacillales incertae sedis	3	0	539002
no rank	unclassified Gammaproteobacteria (miscellaneous)	3	0	33811
no rank	Retro-transcribing viruses	3	0	35268
no rank	unclassified dsDNA viruses	3	0	51368
no rank	unclassified Clostridiales	3	0	186813
no rank	unclassified Rhizobiales	2	0	119042
no rank	unclassified Bacteria	2	0	2323
no rank	unclassified phages	2	0	12333
no rank	Shrimp white spot syndrome virus	2	2	92652
no rank	unclassified Gammaretrovirus	2	0	353769
no rank	Mammalian virus group	1	0	353212
no rank	unassigned viruses	1	0	686617
no rank	unclassified Enterobacteria phage G4 clade	1	0	512009
no rank	Glossina pallidipes salivary gland hypertrophy virus	1	1	379529
unclassified	unclassified	5211540	5211540	0
