LEVEL	TAXA	ROLLUP	ASSIGNED	TAXID
	Actinobacteridae	1279	4	85003
	Coriobacterineae	27	0	255727
	Clostridiales genomosp. BVAB3	3	0	699245
	Methanobacterium sp. AL-21	2	2	868132
	Nudivirus	1	0	483372
	Actinomycineae	1	0	85005
root	root	1341911	13682	1
superkingdom	Bacteria	1251191	1928	2
superkingdom	Viruses	75496	0	10239
superkingdom	Archaea	1224	0	2157
superphylum	Bacteroidetes/Chlorobi group	840	0	68336
superphylum	Chlamydiae/Verrucomicrobia group	14	0	51290
phylum	Proteobacteria	1236593	2033	1224
phylum	Firmicutes	7259	33	1239
phylum	Tenericutes	2591	0	544448
phylum	Actinobacteria	1308	0	201174
phylum	Euryarchaeota	995	7	28890
phylum	Bacteroidetes	836	6	976
phylum	Spirochaetes	425	0	203691
phylum	Crenarchaeota	229	0	28889
phylum	Fusobacteria	104	0	32066
phylum	Cyanobacteria	103	0	1117
phylum	Thermodesulfobacteria	15	0	200940
phylum	Chlamydiae	13	0	204428
phylum	Chlorobi	4	0	1090
phylum	Planctomycetes	3	0	203682
phylum	Candidatus Saccharibacteria	2	0	95818
phylum	Thermotogae	2	0	200918
phylum	Aquificae	2	0	200783
phylum	Chloroflexi	1	0	200795
phylum	Deinococcus-Thermus	1	0	1297
phylum	Verrucomicrobia	1	0	74201
subphylum	delta/epsilon subdivisions	1230	0	68525
class	Betaproteobacteria	1220812	64	28216
class	Gammaproteobacteria	11958	282	1236
class	Bacilli	7041	11	91061
class	Mollicutes	2591	0	31969
class	Actinobacteria	1308	2	1760
class	Halobacteria	921	0	183963
class	Bacteroidia	783	0	200643
class	Deltaproteobacteria	616	0	28221
class	Epsilonproteobacteria	614	0	29547
class	Alphaproteobacteria	560	0	28211
class	Spirochaetia	425	0	203692
class	Thermoprotei	229	0	183924
class	Fusobacteriia	104	0	203490
class	Clostridia	103	1	186801
class	Negativicutes	82	0	909932
class	Flavobacteriia	46	0	117743
class	Methanobacteria	33	0	183925
class	Methanomicrobia	27	0	224756
class	Coriobacteridae	27	0	84998
class	Thermodesulfobacteria	15	0	67799
class	Chlamydiia	13	0	204429
class	Methanococci	7	0	183939
class	Chlorobia	4	0	191410
class	Thermotogae	2	0	188708
class	Aquificae	2	0	187857
class	Phycisphaerae	2	0	666505
class	Deinococci	1	0	188787
class	Cytophagia	1	0	768503
class	Planctomycetia	1	0	203683
class	Thermomicrobia	1	0	189775
subclass	Oscillatoriophycideae	69	0	1301283
subclass	Sphaerobacteridae	1	0	85000
order	Burkholderiales	1219750	37	80840
order	Lactobacillales	5133	17	186826
order	Pseudomonadales	4375	0	72274
order	Pasteurellales	4161	0	135625
order	Mycoplasmatales	2590	0	2085
order	Enterobacteriales	2517	0	91347
order	Bacillales	1897	4	1385
order	Herpesvirales	1615	0	548681
order	Actinomycetales	1262	45	2037
order	Neisseriales	989	0	206351
order	Halobacteriales	921	0	2235
order	Corynebacterineae	819	12	85007
order	Bacteroidales	783	49	171549
order	Caudovirales	658	0	28883
order	Campylobacterales	612	0	213849
order	Desulfovibrionales	522	0	213115
order	Rhizobiales	516	0	356
order	Spirochaetales	425	0	136
order	Micrococcineae	363	0	85006
order	Aeromonadales	343	0	135624
order	Xanthomonadales	238	0	135614
order	Sulfolobales	214	0	2281
order	Fusobacteriales	104	0	203491
order	Myxococcales	89	1	29
order	Selenomonadales	82	0	909929
order	Clostridiales	77	1	186802
order	Flavobacteriales	46	0	200644
order	Oscillatoriales	38	0	1150
order	Rickettsiales	34	0	766
order	Methanobacteriales	33	0	2158
order	Chroococcales	31	0	1118
order	Nostocales	31	0	1161
order	Coriobacteriales	27	0	84999
order	Methanosarcinales	25	0	94695
order	Thermoanaerobacterales	24	0	68295
order	Mononegavirales	22	0	11157
order	Nidovirales	18	0	76804
order	Oceanospirillales	17	0	135619
order	Thermodesulfobacteriales	15	0	188710
order	Desulfurococcales	15	0	114380
order	Bifidobacteriales	13	0	85004
order	Chlamydiales	13	0	51291
order	Streptomycineae	11	0	85011
order	Rhodospirillales	9	0	204441
order	Alteromonadales	9	0	135622
order	Propionibacterineae	8	0	85009
order	Methanococcales	7	0	2182
order	Micromonosporineae	6	0	85008
order	Streptosporangineae	4	0	85012
order	Chlorobiales	4	0	191411
order	Catenulisporineae	4	0	414714
order	Rhodocyclales	3	0	206389
order	Legionellales	3	0	118969
order	Prochlorales	3	0	1212
order	Desulfuromonadales	3	0	69541
order	Vibrionales	3	0	135623
order	Methanomicrobiales	2	0	2191
order	Phycisphaerales	2	0	666506
order	Thermotogales	2	0	2419
order	Chromatiales	2	0	135613
order	Aquificales	2	0	32069
order	Methylophilales	2	0	206350
order	Desulfobacterales	2	0	213118
order	Nautiliales	1	0	235899
order	Methylacidiphilales	1	0	717963
order	Natranaerobiales	1	0	485256
order	Nitrosomonadales	1	0	32003
order	Caulobacterales	1	0	204458
order	Cytophagales	1	0	768507
order	Thermales	1	0	68933
order	Kineosporiineae	1	0	622452
order	Sphaerobacterales	1	0	85001
order	Planctomycetales	1	0	112
order	Acholeplasmatales	1	0	186329
suborder	Nannocystineae	58	0	224462
suborder	Sorangiineae	19	0	80812
suborder	Cystobacterineae	11	0	80811
suborder	Sphaerobacterineae	1	0	255728
family	Alcaligenaceae	1218827	0	506
family	Microviridae	69631	0	10841
family	Pasteurellaceae	4161	102	712
family	Moraxellaceae	3888	44	468
family	Streptococcaceae	3867	10	1300
family	Mycoplasmataceae	2590	0	2092
family	Enterobacteriaceae	2517	282	543
family	Polydnaviridae	2254	851	10482
family	Alloherpesviridae	1337	1	548682
family	Neisseriaceae	989	9	481
family	Halobacteriaceae	921	0	2236
family	Lactobacillaceae	917	3	33958
family	Staphylococcaceae	857	5	90964
family	Bacillaceae	853	0	186817
family	Corynebacteriaceae	795	0	1653
family	Podoviridae	642	0	10744
family	Phycodnaviridae	640	0	10501
family	Helicobacteraceae	602	0	72293
family	Prevotellaceae	573	0	171552
family	Desulfovibrionaceae	522	0	194924
family	Comamonadaceae	500	3	80864
family	Pseudomonadaceae	487	1	135621
family	Spirochaetaceae	412	0	137
family	Micrococcaceae	346	3	1268
family	Aeromonadaceae	343	0	84642
family	Burkholderiaceae	342	1	119060
family	Enterococcaceae	331	0	81852
family	Baculoviridae	324	0	10442
family	Herpesviridae	277	32	10292
family	Xanthomonadaceae	238	17	32033
family	Sulfolobaceae	214	0	118883
family	Methylobacteriaceae	192	0	119045
family	Poxviridae	178	0	10240
family	Listeriaceae	154	0	186820
family	Bradyrhizobiaceae	121	0	41294
family	Bacteroidaceae	115	0	815
family	Rhizobiaceae	107	0	82115
family	Fusobacteriaceae	89	2	203492
family	Veillonellaceae	82	0	31977
family	Beijerinckiaceae	80	0	45404
family	Kofleriaceae	58	0	224464
family	Iridoviridae	43	0	10486
family	Oxalobacteraceae	43	26	75682
family	Porphyromonadaceae	36	2	171551
family	Flavobacteriaceae	35	2	49546
family	Anelloviridae	34	0	687329
family	Rickettsiaceae	34	0	775
family	Paenibacillaceae	29	0	186822
family	Methanobacteriaceae	29	0	2159
family	Coriobacteriaceae	27	0	84107
family	Nostocaceae	26	2	1162
family	Peptostreptococcaceae	25	0	186804
family	Lachnospiraceae	22	0	186803
family	Clostridiales Family XI. Incertae Sedis	20	0	543310
family	Methanosarcinaceae	20	0	2206
family	Nimaviridae	20	0	196937
family	Polyangiaceae	19	0	49
family	Coronaviridae	18	0	11118
family	Leptotrichiaceae	15	2	1129771
family	Thermodesulfobacteriaceae	15	1	188711
family	Halomonadaceae	15	0	28256
family	Pyrodictiaceae	15	0	2307
family	Thermoanaerobacteraceae	15	0	186814
family	Ascoviridae	14	0	43682
family	Bifidobacteriaceae	13	0	31953
family	Brachyspiraceae	12	0	143786
family	Streptomycetaceae	11	0	2062
family	Paramyxoviridae	11	0	11158
family	Siphoviridae	11	0	10699
family	Mycobacteriaceae	10	0	1762
family	Cystobacteraceae	10	0	39
family	Campylobacteraceae	10	0	72294
family	Thermoanaerobacterales Family III. Incertae Sedis	9	0	543371
family	Adenoviridae	9	0	10508
family	Acetobacteraceae	9	0	433
family	Propionibacteriaceae	8	0	31957
family	Parachlamydiaceae	8	0	92713
family	Methanococcaceae	7	0	2183
family	Micromonosporaceae	6	0	28056
family	Psychromonadaceae	5	0	267894
family	Blattabacteriaceae	5	0	39782
family	Methanosaetaceae	5	0	143067
family	Chlamydiaceae	5	0	809
family	Myoviridae	5	0	10662
family	Rivulariaceae	5	0	1185
family	Shewanellaceae	4	0	267890
family	Chlorobiaceae	4	0	191412
family	Catenulisporaceae	4	0	414877
family	Methanothermaceae	4	0	2178
family	Potyviridae	3	0	39729
family	Vibrionaceae	3	0	641
family	Pelobacteraceae	3	0	213423
family	Prochlorococcaceae	3	0	1217
family	Rhodocyclaceae	3	2	75787
family	Streptosporangiaceae	2	0	2004
family	Thermotogaceae	2	0	188709
family	Hahellaceae	2	0	224379
family	Coxiellaceae	2	0	118968
family	Desulfobacteraceae	2	0	213119
family	Methylophilaceae	2	0	32011
family	Nocardiopsaceae	2	2	83676
family	Methylocystaceae	2	0	31993
family	Chromatiaceae	2	0	1046
family	Clostridiaceae	2	0	31979
family	Lipothrixviridae	2	0	10477
family	Phyllobacteriaceae	2	0	69277
family	Methanocorpusculaceae	2	0	88404
family	Phycisphaeraceae	2	0	666507
family	Ruminococcaceae	2	0	541000
family	Orthomyxoviridae	2	0	11308
family	Aquificaceae	2	0	64898
family	Oscillospiraceae	2	0	216572
family	Flammeovirgaceae	1	0	200667
family	Thermaceae	1	0	188786
family	Acholeplasmataceae	1	0	2146
family	Legionellaceae	1	0	444
family	Myxococcaceae	1	0	31
family	Actinomycetaceae	1	0	2049
family	Xanthobacteraceae	1	0	335928
family	Kineosporiaceae	1	0	83778
family	Natranaerobiaceae	1	0	485255
family	Dermacoccaceae	1	0	145357
family	Leptospiraceae	1	0	170
family	Planctomycetaceae	1	0	126
family	Leuconostocaceae	1	0	81850
family	Nautiliaceae	1	0	224467
family	Parvoviridae	1	0	10780
family	Nocardiaceae	1	0	85025
family	Caulobacteraceae	1	0	76892
family	Malacoherpesviridae	1	0	548685
family	Tsukamurellaceae	1	0	85028
family	Nitrosomonadaceae	1	0	206379
family	Papillomaviridae	1	0	151340
family	Methylacidiphilaceae	1	0	717964
family	Sphaerobacteraceae	1	0	85002
subfamily	Autographivirinae	642	0	542835
subfamily	Chordopoxvirinae	178	0	10241
subfamily	Betaherpesvirinae	117	0	10357
subfamily	Alphaherpesvirinae	107	0	10293
subfamily	Gammaherpesvirinae	21	0	10374
subfamily	Coronavirinae	18	0	693995
subfamily	Paramyxovirinae	8	0	11159
subfamily	Pneumovirinae	3	0	11244
subfamily	Spounavirinae	1	0	857473
subfamily	Parvovirinae	1	0	40119
tribe	Rickettsieae	34	0	33988
genus	Achromobacter	1218820	0	222
genus	Microvirus	69631	84	10842
genus	Haemophilus	3957	24	724
genus	Streptococcus	3857	713	1301
genus	Mycoplasma	2590	6	2093
genus	Moraxella	2534	0	475
genus	Ichnovirus	1388	3	10483
genus	Acinetobacter	1308	49	469
genus	Ictalurivirus	1279	0	172653
genus	Neisseria	967	331	482
genus	Lactobacillus	914	12	1578
genus	Staphylococcus	852	28	1279
genus	Bacillus	797	0	1386
genus	Corynebacterium	795	175	1716
genus	T7likevirus	642	0	110456
genus	Helicobacter	602	1	209
genus	Serratia	577	5	613
genus	Prevotella	573	27	838
genus	Salinarchaeum	557	0	1269201
genus	Escherichia	529	17	561
genus	Lawsonia	522	0	41707
genus	Klebsiella	518	54	570
genus	Verminephrobacter	492	0	364316
genus	Pseudomonas	486	19	286
genus	Coccolithovirus	404	0	346673
genus	Borrelia	365	0	138
genus	Aeromonas	342	0	642
genus	Rothia	341	7	32207
genus	Enterococcus	331	179	1350
genus	Burkholderia	329	4	32008
genus	Alphabaculovirus	310	0	558016
genus	Natrialba	294	0	63742
genus	Phaeovirus	231	0	181085
genus	Sulfolobus	213	0	2284
genus	Proteus	196	0	583
genus	Methylobacterium	192	0	407
genus	Listeria	154	0	1637
genus	Orthopoxvirus	148	72	10242
genus	Xanthomonas	124	2	338
genus	Bacteroides	115	5	816
genus	Rhodopseudomonas	100	0	1073
genus	Simplexvirus	95	0	10294
genus	Dickeya	86	0	204037
genus	Fusobacterium	85	0	848
genus	Veillonella	80	0	29465
genus	Beijerinckia	80	0	532
genus	Enterobacter	80	2	547
genus	Stenotrophomonas	79	0	40323
genus	Yersinia	77	4	629
genus	Muromegalovirus	77	0	10365
genus	Histophilus	69	0	214906
genus	Haliangium	58	0	162027
genus	Cyprinivirus	57	0	692606
genus	Geobacillus	56	0	129337
genus	Sinorhizobium	51	0	28105
genus	Morganella	49	0	581
genus	Treponema	45	3	157
genus	Ranavirus	43	0	10492
genus	Buchnera	41	0	32199
genus	Providencia	40	0	586
genus	Natronococcus	35	0	29287
genus	Rickettsia	34	0	780
genus	Rhizobium	34	2	379
genus	Oscillatoria	33	0	1158
genus	Halovivax	31	0	332951
genus	Molluscipoxvirus	30	0	10278
genus	Alphatorquevirus	29	6	687331
genus	Paenibacillus	29	0	44249
genus	Methanobrevibacter	26	0	2172
genus	Roseolovirus	24	0	40272
genus	Filifactor	23	0	44259
genus	Candidatus Liberibacter	21	0	34019
genus	Finegoldia	20	0	150022
genus	Capnocytophaga	20	3	1016
genus	Whispovirus	20	0	249585
genus	Sorangium	19	0	39643
genus	Anabaena	19	0	1163
genus	Roseburia	19	0	841
genus	Alphacoronavirus	18	0	693996
genus	Macavirus	18	0	548687
genus	Porphyromonas	18	0	836
genus	Tropheryma	16	0	2038
genus	Nitrobacter	16	0	911
genus	Candidatus Portiera	15	0	235572
genus	Chamaesiphon	15	0	217161
genus	Bracovirus	15	0	10485
genus	Tannerella	15	0	195950
genus	Pyrolobus	15	0	54251
genus	Ascovirus	14	3	43680
genus	Shigella	14	1	620
genus	Thermodesulfobacterium	14	0	1740
genus	Cytomegalovirus	13	0	10358
genus	Betabaculovirus	13	0	558017
genus	Aggregatibacter	12	1	416916
genus	Mardivirus	12	0	180252
genus	Brachyspira	12	0	29521
genus	Pseudoxanthomonas	11	0	83618
genus	Chromobacterium	11	0	535
genus	Bifidobacterium	11	0	1678
genus	Candidatus Hodgkinia	11	0	573657
genus	Thermoanaerobacter	10	0	1754
genus	Mycobacterium	10	0	1763
genus	Candidatus Azobacteroides	10	0	511434
genus	Streptomyces	10	0	1883
genus	Campylobacter	10	0	194
genus	Stigmatella	10	0	40
genus	Atopobium	10	0	1380
genus	Leptotrichia	10	0	32067
genus	Acidiphilium	9	0	522
genus	Caldicellulosiruptor	9	0	44000
genus	Mannheimia	9	0	75984
genus	Mastadenovirus	9	0	10509
genus	Eggerthella	9	0	84111
genus	Methanomethylovorans	8	0	101191
genus	Parachlamydia	8	0	83551
genus	Candidatus Carsonella	8	0	114185
genus	Cryptobacterium	8	0	84162
genus	Methanosarcina	8	0	2207
genus	Respirovirus	8	0	186938
genus	Microlunatus	8	0	29404
genus	Cellulophaga	7	0	104264
genus	Janthinobacterium	7	0	29580
genus	Methanococcus	7	0	2184
genus	Candidatus Sulcia	6	0	336809
genus	Cupriavidus	6	0	106589
genus	Cronobacter	6	0	413496
genus	Gloeocapsa	6	0	102231
genus	Microcystis	6	0	1125
genus	Xylella	6	0	2370
genus	Blattabacterium	5	0	34098
genus	Caldanaerobacter	5	0	249529
genus	Pasteurella	5	0	745
genus	Psychromonas	5	0	67572
genus	Collimonas	5	0	202907
genus	Methanosaeta	5	0	2222
genus	Bradyrhizobium	5	0	374
genus	Citrobacter	5	0	544
genus	Chlamydia	5	0	810
genus	Salmonella	5	0	590
genus	Actinoplanes	5	0	1865
genus	Chlorovirus	5	3	181083
genus	Herbaspirillum	5	0	963
genus	Actinobacillus	5	0	713
genus	Rivularia	5	0	373984
genus	Cyanothece	4	2	43988
genus	Ralstonia	4	0	48736
genus	Methanosalsum	4	0	196136
genus	Shewanella	4	0	22
genus	Methanothermus	4	0	2179
genus	Pantoea	4	0	53335
genus	Catenulispora	4	0	414878
genus	Pneumovirus	3	0	11245
genus	Betatorquevirus	3	3	687332
genus	Edwardsiella	3	1	635
genus	Polaromonas	3	1	52972
genus	Pelodictyon	3	0	1099
genus	Flavobacterium	3	0	237
genus	Prochlorococcus	3	0	1218
genus	Cylindrospermum	3	0	56106
genus	Bordetella	3	2	517
genus	Pelobacter	3	0	18
genus	Methanobacterium	3	0	2160
genus	Vibrio	3	0	662
genus	Potyvirus	3	0	12195
genus	Raoultella	2	0	160674
genus	Haloquadratum	2	0	293431
genus	Psychrobacter	2	2	497
genus	Trichodesmium	2	0	1205
genus	Natronomonas	2	0	63743
genus	Lymphocryptovirus	2	0	10375
genus	Mesorhizobium	2	0	68287
genus	Candidatus Saccharimonas	2	0	1331051
genus	Pusillimonas	2	0	305976
genus	Streptosporangium	2	0	2000
genus	Ilyobacter	2	0	167639
genus	Clostridium	2	0	1485
genus	Methanocorpusculum	2	0	2192
genus	Nostoc	2	0	1177
genus	Desulfococcus	2	0	896
genus	Taylorella	2	0	29574
genus	Hydrogenobacter	2	0	939
genus	Pseudogulbenkiania	2	0	568394
genus	Streptobacillus	2	0	34104
genus	Influenzavirus A	2	0	197911
genus	Butyrivibrio	2	0	830
genus	Phycisphaera	2	0	666508
genus	Oscillibacter	2	0	459786
genus	Phikzlikevirus	2	0	680115
genus	Methylocystis	2	0	133
genus	Coxiella	2	0	776
genus	Mesotoga	2	0	1184396
genus	Pandoraea	2	0	93217
genus	Methylovorus	2	2	81682
genus	Megasphaera	2	0	906
genus	Hahella	2	0	158481
genus	Gallibacterium	2	0	155493
genus	Kocuria	2	0	57493
genus	Ruminococcus	2	0	1263
genus	Betalipothrixvirus	2	0	341940
genus	Gardnerella	2	0	2701
genus	Candidatus Tremblaya	2	0	189384
genus	Thioflavicoccus	2	0	156885
genus	Sphaerochaeta	2	0	399320
genus	Geitlerinema	1	0	63132
genus	Sebaldella	1	0	32068
genus	Arcanobacterium	1	0	28263
genus	Candidatus Hamiltonella	1	0	568987
genus	Oceanimonas	1	0	129577
genus	Sphaerobacter	1	0	2056
genus	Kineococcus	1	0	33981
genus	Croceibacter	1	0	216431
genus	Verrucosispora	1	0	84593
genus	Arthrospira	1	0	35823
genus	Leuconostoc	1	0	1243
genus	Shimwellia	1	0	1335483
genus	Natranaerobius	1	0	375928
genus	Candidatus Phytoplasma	1	0	33926
genus	Comamonas	1	0	283
genus	Xanthobacter	1	0	279
genus	Coprococcus	1	0	33042
genus	Caulobacter	1	0	75
genus	Chlorobaculum	1	0	256319
genus	Amdovirus	1	0	310911
genus	Spounalikevirus	1	0	140409
genus	Rahnella	1	0	34037
genus	Deltabaculovirus	1	0	558019
genus	Tsukamurella	1	0	2060
genus	Nautilia	1	0	191291
genus	Crinalium	1	0	241421
genus	Anaeromyxobacter	1	0	161492
genus	Methylacidiphilum	1	0	511745
genus	Thermus	1	0	270
genus	Zobellia	1	0	112040
genus	Nitrosomonas	1	0	914
genus	Percavirus	1	0	548688
genus	Metallosphaera	1	0	41980
genus	Variovorax	1	0	34072
genus	Rhodococcus	1	0	1827
genus	Parabacteroides	1	0	375288
genus	Kitasatospora	1	0	2063
genus	Tunalikevirus	1	0	187217
genus	Candidatus Accumulibacter	1	0	327159
genus	Ostreavirus	1	0	548686
genus	Rhodanobacter	1	0	75309
genus	Azospira	1	0	146937
genus	Marivirga	1	0	869806
genus	Planctomyces	1	0	118
genus	Sulfurovum	1	0	265570
genus	Kytococcus	1	0	57499
genus	Psychroflexus	1	0	83612
genus	Legionella	1	1	445
genus	Leptospira	1	0	171
subgenus	Branhamella	2534	0	46226
species group	Acinetobacter calcoaceticus/baumannii complex	1259	15	909768
species group	Bacillus cereus group	701	0	86661
species group	pseudomallei group	310	0	111527
species group	Pseudomonas syringae group	265	0	136849
species group	Streptococcus anginosus group	156	19	671232
species group	Pseudomonas aeruginosa group	138	0	136841
species group	Borrelia burgdorferi group	79	0	64895
species group	Enterobacter cloacae complex	72	2	354276
species group	Pseudomonas fluorescens group	45	3	136843
species group	spotted fever group	33	0	114277
species group	Lactobacillus casei group	19	13	655183
species group	Pseudomonas putida group	14	0	136845
species group	Burkholderia cepacia complex	12	0	87882
species group	Streptococcus dysgalactiae group	12	0	119603
species group	Mycobacterium chelonae group	10	0	670516
species group	Mycoplasma mycoides group	7	0	656088
species group	Vibrio harveyi group	3	0	717610
species group	typhus group	1	0	114292
species group	Bacillus subtilis group	1	0	653685
species group	Candidatus Phytoplasma asteris	1	0	85620
species subgroup	Pseudomonas syringae group genomosp. 2	265	0	251698
species subgroup	Mycobacterium abscessus subgroup	10	0	670506
species	Achromobacter xylosoxidans	1218820	0	85698
species	Enterobacteria phage phiX174 sensu lato	69543	69543	374840
species	Haemophilus influenzae	3743	2810	727
species	Moraxella catarrhalis	2534	0	480
species	Mycoplasma hyopneumoniae	1820	21	2099
species	Ictalurid herpesvirus 1	1279	1279	10401
species	Acinetobacter baumannii	1244	1181	470
species	Hyposoter fugitivus ichnovirus	857	857	265522
species	Streptococcus parasanguinis	855	359	1318
species	Lactobacillus rhamnosus	749	477	47715
species	Staphylococcus aureus	707	657	1280
species	Bacillus thuringiensis	689	0	1428
species	Yersinia phage phiA1122	642	642	227720
species	Salinarchaeum sp. Harcht-Bsk1	557	557	1333523
species	Serratia marcescens	543	0	615
species	Mycoplasma hyorhinis	531	474	2100
species	Glypta fumiferanae ichnovirus	528	528	419435
species	Lawsonia intracellularis	522	0	29546
species	Escherichia coli	512	384	562
species	Verminephrobacter eiseniae	492	0	364317
species	Klebsiella pneumoniae	461	406	573
species	Streptococcus agalactiae	453	401	1311
species	Prevotella melaninogenica	436	0	28132
species	Neisseria meningitidis	434	326	487
species	Emiliania huxleyi virus 86	404	404	181082
species	Corynebacterium aurimucosum	400	0	169292
species	Helicobacter bizzozeronii	375	0	56877
species	Aeromonas hydrophila	342	0	644
species	Streptococcus suis	326	4	1307
species	Burkholderia mallei	307	280	13373
species	Rothia mucilaginosa	301	0	43675
species	Natrialba magadii	294	0	13769
species	Pseudomonas savastanoi	265	0	29438
species	Maruca vitrata nucleopolyhedrovirus	259	259	1307954
species	Streptococcus salivarius	257	115	1304
species	Streptococcus pneumoniae	233	187	1313
species	Ectocarpus siliculosus virus 1	231	231	37665
species	Streptococcus oralis	226	0	1303
species	Sulfolobus islandicus	213	0	43080
species	Streptococcus mitis	200	0	28037
species	Proteus mirabilis	196	72	584
species	Helicobacter cetorum	189	0	138563
species	Borrelia duttonii	187	0	40834
species	Methylobacterium radiotolerans	186	0	31998
species	Haemophilus parainfluenzae	184	0	729
species	Mycoplasma ovis	161	0	171632
species	Listeria monocytogenes	154	154	1639
species	Enterococcus faecalis	140	61	1351
species	Pseudomonas aeruginosa	134	90	287
species	Xanthomonas campestris	119	90	339
species	Neisseria lactamica	119	0	486
species	Staphylococcus epidermidis	113	90	1282
species	Corynebacterium diphtheriae	102	75	1717
species	Rhodopseudomonas palustris	100	0	1076
species	Streptococcus pseudopneumoniae	99	0	257758
species	Borrelia crocidurae	96	0	29520
species	Bacillus infantis	90	0	324767
species	Dickeya dadantii	86	0	204038
species	Fusobacterium nucleatum	85	13	851
species	Neisseria gonorrhoeae	83	60	485
species	Beijerinckia indica	80	0	533
species	Veillonella parvula	80	0	29466
species	Streptococcus gordonii	79	0	1302
species	Stenotrophomonas maltophilia	79	20	40324
species	Streptococcus pyogenes	75	71	1314
species	Murid herpesvirus 2	73	73	28304
species	Borrelia valaisiana	72	0	62088
species	Histophilus somni	69	2	731
species	Enterobacter cloacae	67	11	550
species	Bacteroides helcogenes	67	0	290053
species	Vaccinia virus	63	63	10245
species	Corynebacterium resistens	59	0	258224
species	Prevotella denticola	58	0	28129
species	Haliangium ochraceum	58	0	80816
species	Streptococcus anginosus	54	12	1328
species	Morganella morganii	49	0	582
species	Human herpesvirus 1	49	49	10298
species	Streptococcus sp. I-G2	48	48	1156431
species	Yersinia enterocolitica	48	0	630
species	Streptococcus sp. I-P16	48	48	1156433
species	Lactobacillus gasseri	46	0	1596
species	Cercopithecine herpesvirus 2	45	45	10317
species	Frog virus 3	43	43	10493
species	Streptococcus intermedius	43	26	1338
species	Buchnera aphidicola	41	0	9
species	Bacteroides fragilis	40	34	817
species	Providencia stuartii	40	0	588
species	Streptococcus constellatus	40	0	76860
species	Pseudomonas fluorescens	40	4	294
species	Sinorhizobium fredii	40	0	380
species	Cyprinid herpesvirus 3	39	39	180230
species	Helicobacter pylori	37	0	210
species	Natronococcus occultus	35	0	29288
species	Lactobacillus sanfranciscensis	35	0	1625
species	Rickettsia africae	33	0	35788
species	Mamestra configurata nucleopolyhedrovirus A	33	33	207830
species	Rothia dentocariosa	33	0	2047
species	Rhizobium leguminosarum	32	0	384
species	Halovivax ruber	31	0	387341
species	Corynebacterium callunae	30	0	1721
species	Molluscum contagiosum virus	30	0	10279
species	Geobacillus sp. GHH01	29	29	1233873
species	Treponema pedis	29	0	409322
species	Paenibacillus mucilaginosus	28	0	61624
species	Geobacillus thermoleovorans	27	0	33941
species	Streptococcus sanguinis	26	0	1305
species	Streptococcus thermophilus	26	22	1308
species	Yersinia pseudotuberculosis	25	4	633
species	Human herpesvirus 7	24	24	10372
species	Oscillatoria acuminata	24	0	118323
species	Serratia plymuthica	23	0	82996
species	Filifactor alocis	23	0	143361
species	Prevotella sp. oral taxon 299	23	0	652716
species	Streptococcus oligofermentans	22	0	195041
species	Finegoldia magna	20	0	1260
species	White spot syndrome virus	20	0	342409
species	Sorangium cellulosum	19	0	56
species	Candidatus Liberibacter americanus	19	0	309868
species	Anabaena sp. 90	19	19	46234
species	Roseburia hominis	19	0	301301
species	Anguillid herpesvirus 1	18	18	150286
species	Human coronavirus NL63	18	18	277944
species	Porphyromonas gingivalis	18	2	837
species	Ovine herpesvirus 2	18	18	10398
species	Methanobrevibacter smithii	17	0	2173
species	Tropheryma whipplei	16	14	2039
species	Nitrobacter hamburgensis	16	0	912
species	Cotesia congregata bracovirus	15	15	39640
species	Pyrolobus fumarii	15	0	54252
species	Capnocytophaga ochracea	15	0	1018
species	Chamaesiphon minutus	15	0	1173032
species	Tannerella forsythia	15	0	28112
species	Prevotella intermedia	15	0	28131
species	Mycoplasma suis	15	0	57372
species	Candidatus Portiera aleyrodidarum	15	14	91844
species	Thermodesulfobacterium geofontis	14	0	1295609
species	Pseudomonas putida	14	0	303
species	Cercopithecine herpesvirus 5	13	13	50292
species	Torque teno virus 16	13	13	687355
species	Treponema denticola	12	0	158
species	Lactobacillus fermentum	12	12	1613
species	Shigella flexneri	12	10	623
species	Pseudoxanthomonas spadix	11	0	415229
species	Mycoplasma cynos	11	0	171284
species	Chromobacterium violaceum	11	0	536
species	Sinorhizobium meliloti	11	11	382
species	Candidatus Hodgkinia cicadicola	11	0	573658
species	Burkholderia lata	11	11	482957
species	Bacillus cereus	11	0	1396
species	Nyamanini virus	11	11	644610
species	Stigmatella aurantiaca	10	0	41
species	Lactobacillus reuteri	10	10	1598
species	Mycobacterium abscessus	10	10	36809
species	Thermoanaerobacter wiegelii	10	0	46354
species	Leptotrichia buccalis	10	0	40542
species	Atopobium parvulum	10	0	1382
species	Candidatus Azobacteroides pseudotrichonymphae	10	0	511435
species	Enterococcus faecium	9	5	1352
species	Eggerthella lenta	9	0	84112
species	Lactobacillus ruminis	9	0	1623
species	Human adenovirus C	9	9	129951
species	Brachyspira murdochii	9	0	84378
species	Campylobacter concisus	9	0	199
species	Aggregatibacter aphrophilus	9	0	732
species	Oscillatoria nigro-viridis	9	0	482564
species	Mannheimia haemolytica	9	1	75985
species	Corynebacterium urealyticum	9	8	43771
species	Microlunatus phosphovorus	8	0	29405
species	Parachlamydia acanthamoebae	8	0	83552
species	Candidatus Carsonella ruddii	8	0	114186
species	Human parainfluenza virus 3	8	8	11216
species	Lactobacillus crispatus	8	0	47770
species	Trichoplusia ni ascovirus 2c	8	8	328615
species	Methanomethylovorans hollandica	8	0	101192
species	Prevotella dentalis	8	0	52227
species	Cryptobacterium curtum	8	0	84163
species	Mycoplasma genitalium	8	0	2097
species	Caldicellulosiruptor saccharolyticus	7	0	44001
species	Pseudaletia unipuncta granulovirus	7	7	36355
species	Meleagrid herpesvirus 1	7	7	37108
species	Methanosarcina barkeri	7	0	2208
species	Mycoplasma mycoides	7	0	2102
species	Acidiphilium multivorum	7	0	62140
species	Cellulophaga algicola	7	0	59600
species	Borrelia burgdorferi	7	0	139
species	Janthinobacterium sp. Marseille	7	7	375286
species	Streptomyces cattleya	7	0	29303
species	Gloeocapsa sp. PCC 7428	6	6	1173026
species	Methanococcus aeolicus	6	0	42879
species	Methanobrevibacter ruminantium	6	0	83816
species	Corynebacterium jeikeium	6	0	38289
species	Agrotis segetum nucleopolyhedrovirus	6	6	31508
species	Candidatus Sulcia muelleri	6	1	336810
species	Mycoplasma pulmonis	6	0	2107
species	Xylella fastidiosa	6	5	2371
species	Streptococcus dysgalactiae	6	0	1334
species	Methylobacterium nodulans	6	0	114616
species	Mycoplasma gallisepticum	6	4	2096
species	Mycoplasma conjunctivae	6	0	45361
species	Microcystis aeruginosa	6	0	1126
species	Streptococcus equi	6	1	1336
species	Prevotella ruminicola	6	0	839
species	Cronobacter sakazakii	6	0	28141
species	Lactobacillus casei	5	5	1582
species	Bradyrhizobium oligotrophicum	5	0	44255
species	Psychromonas ingrahamii	5	0	357794
species	Choristoneura fumiferana DEF multiple nucleopolyhedrovirus	5	5	74660
species	Collimonas fungivorans	5	0	158899
species	Spodoptera frugiperda multiple nucleopolyhedrovirus	5	5	10455
species	Torque teno virus 1	5	5	687340
species	Rivularia sp. PCC 7116	5	5	373994
species	Chlamydia pecorum	5	4	85991
species	Gallid herpesvirus 2	5	5	10390
species	Caldanaerobacter subterraneus	5	0	911092
species	Pasteurella multocida	5	1	747
species	Methanosaeta harundinacea	5	0	301375
species	Bifidobacterium animalis	5	0	28025
species	Lactobacillus johnsonii	5	3	33959
species	Salmonella enterica	5	0	28901
species	Herbaspirillum seropedicae	5	0	964
species	Murid herpesvirus 1	4	4	10366
species	Ralstonia solanacearum	4	2	305
species	Enterobacter aerogenes	4	1	548
species	Spodoptera litura granulovirus	4	4	359919
species	Pseudomonas mendocina	4	0	300
species	Bifidobacterium dentium	4	0	1689
species	Pantoea ananatis	4	0	553
species	Mycoplasma arthritidis	4	0	2111
species	Haemophilus parasuis	4	1	738
species	Methanosalsum zhilinae	4	0	39669
species	Methanothermus fervidus	4	0	2180
species	Catenulispora acidiphila	4	0	304895
species	Serratia liquefaciens	4	0	614
species	Mycoplasma bovis	4	2	28903
species	Citrobacter koseri	4	0	545
species	Pseudomonas brassicacearum	4	0	930166
species	Taterapox virus	4	4	28871
species	Bacillus pseudofirmus	4	0	79885
species	Enterococcus phage EF62phi	4	4	977801
species	Vibrio parahaemolyticus	3	0	670
species	Respiratory syncytial virus	3	3	12814
species	Brachyspira hyodysenteriae	3	0	159
species	Corynebacterium glutamicum	3	3	1718
species	Actinobacillus suis	3	0	716
species	Cylindrospermum stagnale	3	0	142864
species	Prochlorococcus marinus	3	0	1219
species	Pelobacter propionicus	3	0	29543
species	Lactobacillus salivarius	3	3	1624
species	Bacteroides salanitronis	3	0	376805
species	Blattabacterium sp. (Blaberus giganteus)	3	3	1186051
species	Klebsiella oxytoca	3	1	571
species	Enterobacteria phage ID18 sensu lato	3	3	489829
species	Pelodictyon phaeoclathratiforme	3	0	34090
species	Spodoptera frugiperda ascovirus 1a	3	3	113370
species	Lactobacillus acidophilus	3	3	1579
species	Corynebacterium variabile	3	0	1727
species	Actinoplanes friuliensis	3	0	196914
species	Mycoplasma wenyonii	3	0	65123
species	Staphylococcus haemolyticus	3	0	1283
species	Tupaiid herpesvirus 1	3	3	10397
species	Corynebacterium halotolerans	3	0	225326
species	Shewanella violacea	3	0	60217
species	Camelpox virus	3	3	28873
species	Methanobrevibacter sp. AbM4	3	3	224719
species	Choristoneura occidentalis granulovirus	2	2	364745
species	Oscillibacter valericigenes	2	0	351091
species	Xanthomonas euvesicatoria	2	0	456327
species	Corynebacterium ulcerans	2	2	65058
species	Thioflavicoccus mobilis	2	0	80679
species	Ruminococcus albus	2	0	1264
species	Kocuria rhizophila	2	0	72000
species	Trichodesmium erythraeum	2	0	1206
species	Acidiphilium cryptum	2	0	524
species	Phycisphaera mikurensis	2	0	547188
species	Methanocorpusculum labreanum	2	0	83984
species	Pseudomonas phage D3	2	2	31535
species	Haloquadratum walsbyi	2	0	293091
species	Watermelon mosaic virus	2	2	146500
species	Torque teno virus 3	2	2	687342
species	Small anellovirus	2	0	393049
species	Capnocytophaga canimorsus	2	0	28188
species	Candidatus Liberibacter solanacearum	2	0	556287
species	Natronomonas moolapensis	2	0	416273
species	Pseudogulbenkiania sp. NH8B	2	2	748280
species	Actinobacillus pleuropneumoniae	2	2	715
species	Pandoraea pnomenusa	2	0	93220
species	Streptosporangium roseum	2	0	2001
species	[Clostridium] difficile	2	2	1496
species	Streptomyces scabiei	2	0	1930
species	Desulfococcus oleovorans	2	0	181663
species	Raoultella ornithinolytica	2	0	54291
species	Influenza A virus	2	0	11320
species	Enterobacter sp. 638	2	2	399742
species	Cowpox virus	2	2	10243
species	Pseudomonas phage phiKZ	2	2	169683
species	Flavobacterium branchiophilum	2	0	55197
species	Ilyobacter polytropus	2	0	167642
species	Bifidobacterium longum	2	2	216816
species	Polaromonas sp. JS666	2	2	296591
species	Orgyia leucostigma NPV	2	2	490711
species	Butyrivibrio proteoclasticus	2	0	43305
species	Borrelia recurrentis	2	0	44449
species	Megasphaera elsdenii	2	0	907
species	Staphylococcus phage PH15	2	2	399185
species	Pseudomonas protegens	2	0	380021
species	Enterobacter asburiae	2	0	61645
species	Caldicellulosiruptor kronotskyensis	2	0	413889
species	Methylocystis sp. SC2	2	2	187303
species	Cupriavidus necator	2	2	106590
species	Streptobacillus moniliformis	2	0	34105
species	Staphylococcus aureus subsp. aureus MSHR1132	2	2	985002
species	Mesotoga prima	2	0	1184387
species	Haemophilus ducreyi	2	0	730
species	Serratia proteamaculans	2	0	28151
species	Burkholderia pseudomallei	2	0	28450
species	Actinoplanes sp. N902-109	2	2	649831
species	Edwardsiella ictaluri	2	0	67780
species	Pusillimonas sp. T7-7	2	2	1007105
species	Coxiella burnetii	2	0	777
species	Torque teno virus 15	2	2	687354
species	Acidianus filamentous virus 9	2	2	512792
species	Mycoplasma agalactiae	2	2	2110
species	Gallibacterium anatis	2	0	750
species	Hydrogenobacter thermophilus	2	0	940
species	Human herpesvirus 4	2	2	10376
species	Corynebacterium efficiens	2	0	152794
species	Hahella chejuensis	2	0	158327
species	Burkholderia phytofirmans	2	0	261302
species	Cupriavidus metallidurans	2	0	119219
species	Ectromelia virus	2	2	12643
species	Aggregatibacter actinomycetemcomitans	2	0	714
species	Cupriavidus pinatubonensis	2	0	248026
species	Gardnerella vaginalis	2	0	2702
species	Taylorella equigenitalis	2	2	29575
species	Candidatus Saccharimonas aalborgensis	2	2	1332188
species	Enterococcus hirae	2	0	1354
species	Candidatus Tremblaya princeps	2	2	189385
species	Monkeypox virus	1	0	10244
species	Mesorhizobium loti	1	0	381
species	Bacillus cellulosilyticus	1	0	1413
species	Lactobacillus sakei	1	0	1599
species	Sphaerochaeta coccoides	1	0	273376
species	Methanobacterium sp. MB1	1	1	1379702
species	Equid herpesvirus 2	1	1	12657
species	Variola virus	1	1	10255
species	Shewanella loihica	1	0	359303
species	Methanosarcina acetivorans	1	0	2214
species	Enterococcus sp. 7L76	1	1	657310
species	Lactobacillus plantarum	1	0	1590
species	Propionibacterium phage PA6	1	1	376758
species	Sphaerobacter thermophilus	1	0	2057
species	Sulfurovum sp. NBC37-1	1	1	387093
species	Bordetella petrii	1	0	94624
species	Crinalium epipsammum	1	0	241425
species	Clostridium cellulolyticum	1	0	1521
species	Burkholderia cenocepacia	1	0	95486
species	Azospira oryzae	1	0	146939
species	Shimwellia blattae	1	0	563
species	Enterobacteria phage RTP	1	1	355246
species	Methylacidiphilum infernorum	1	0	511746
species	Torque teno virus 8	1	1	687347
species	Candidatus Accumulibacter phosphatis	1	0	327160
species	Paramecium bursaria Chlorella virus NY2A	1	1	46021
species	Lactobacillus phage KC5a	1	1	363555
species	Kytococcus sedentarius	1	0	1276
species	Lactobacillus paracasei	1	0	1597
species	Streptococcus macedonicus	1	0	59310
species	Streptococcus gallolyticus	1	0	315405
species	Oceanimonas sp. GK1	1	1	511062
species	Kitasatospora setae	1	0	2066
species	Lactobacillus delbrueckii	1	0	1584
species	Ostreid herpesvirus 1	1	1	261939
species	Variovorax paradoxus	1	0	34073
species	Arthrospira platensis	1	0	118562
species	Enterobacteria phage St-1	1	1	10845
species	Sphaerochaeta pleomorpha	1	0	1131707
species	Xanthomonas oryzae	1	0	347
species	Bacillus weihenstephanensis	1	0	86662
species	Candidatus Hamiltonella defensa	1	0	138072
species	Treponema primitia	1	0	88058
species	Leptospira interrogans	1	0	173
species	Streptomyces avermitilis	1	0	33903
species	Methanococcus vannielii	1	0	2187
species	Nostoc punctiforme	1	0	272131
species	Coprococcus sp. ART55/1	1	1	751585
species	Bacillus phage SPO1	1	1	10685
species	Rhodanobacter denitrificans	1	1	666685
species	Lactococcus phage phiLC3	1	1	12390
species	Nostoc sp. PCC 7524	1	1	28072
species	Planctomyces brasiliensis	1	0	119
species	Streptococcus mutans	1	0	1309
species	Chlorobaculum tepidum	1	0	1097
species	Caulobacter sp. K31	1	1	366602
species	Citrobacter rodentium	1	0	67825
species	Burkholderia thailandensis	1	0	57975
species	Natranaerobius thermophilus	1	0	375929
species	Paramecium bursaria Chlorella virus AR158	1	1	380598
species	Campylobacter hominis	1	0	76517
species	Streptococcus phage EJ-1	1	1	12402
species	Xanthobacter autotrophicus	1	0	280
species	Marivirga tractuosa	1	0	1006
species	Croceibacter atlanticus	1	0	313588
species	Sebaldella termitidis	1	0	826
species	Rhodococcus erythropolis	1	1	1833
species	Oryctes rhinoceros virus	1	1	92521
species	Kineococcus radiotolerans	1	0	131568
species	Flavobacterium psychrophilum	1	0	96345
species	Macacine herpesvirus 1	1	1	10325
species	Thermus scotoductus	1	0	37636
species	Staphylococcus saprophyticus	1	0	29385
species	Parabacteroides distasonis	1	0	823
species	Tsukamurella paurometabola	1	0	2061
species	Borrelia turicatae	1	0	142
species	Nautilia profundicola	1	0	244787
species	Cyanothece sp. PCC 8801	1	1	41431
species	Shigella sonnei	1	1	624
species	Metallosphaera cuprina	1	0	1006005
species	Enterobacter lignolyticus	1	0	1334193
species	Blattabacterium sp. (Mastotermes darwiniensis)	1	0	39768
species	Rahnella aquatilis	1	0	34038
species	Verrucosispora maris	1	0	1003110
species	Mesorhizobium opportunistum	1	0	593909
species	Pseudomonas entomophila	1	0	312306
species	Cyanothece sp. PCC 7822	1	1	497965
species	Blattabacterium sp. (Blatta orientalis)	1	0	367806
species	Nitrosomonas eutropha	1	0	916
species	Bacillus subtilis	1	0	1423
species	Zobellia galactanivorans	1	1	63186
species	Anaeromyxobacter sp. Fw109-5	1	1	404589
species	Tomato yellow dwarf disease associated satellite DNA beta-[Kochi]	1	1	427315
species	Paenibacillus polymyxa	1	0	1406
species	Burkholderia sp. RPE64	1	1	758793
species	Culex nigripalpus nucleopolyhedrovirus	1	1	130556
species	Rickettsia prowazekii	1	1	782
species	Geitlerinema sp. PCC 7407	1	1	1173025
species	Psychroflexus torquis	1	0	57029
species	Onion yellows phytoplasma	1	0	100379
species	Moroccan watermelon mosaic virus	1	1	167129
species	Comamonas testosteroni	1	0	285
species	Clostridium botulinum	1	0	1491
species	Arcanobacterium haemolyticum	1	0	28264
species	Corynebacterium pseudotuberculosis	1	1	1719
subspecies	Beijerinckia indica subsp. indica	80	0	31994
subspecies	Enterobacter cloacae subsp. cloacae	51	4	336306
subspecies	Morganella morganii subsp. morganii	49	0	180434
subspecies	Yersinia enterocolitica subsp. palearctica	48	0	150053
subspecies	Staphylococcus aureus subsp. aureus	45	31	46170
subspecies	Fusobacterium nucleatum subsp. vincentii	43	0	155615
subspecies	Streptococcus constellatus subsp. pharyngis	40	40	184250
subspecies	Klebsiella pneumoniae subsp. pneumoniae	33	16	72407
subspecies	Fusobacterium nucleatum subsp. animalis	21	0	76859
subspecies	Fusobacterium nucleatum subsp. nucleatum	8	0	76856
subspecies	Mycoplasma mycoides subsp. mycoides	7	0	2103
subspecies	Streptococcus dysgalactiae subsp. equisimilis	6	0	119602
subspecies	Bifidobacterium animalis subsp. lactis	5	5	302911
subspecies	Caldanaerobacter subterraneus subsp. tengcongensis	5	0	119072
subspecies	Enterobacter cloacae subsp. dissolvens	5	0	69219
subspecies	Streptococcus equi subsp. zooepidemicus	5	2	40041
subspecies	Salmonella enterica subsp. enterica	5	3	59201
subspecies	Pseudomonas brassicacearum subsp. brassicacearum	4	0	86264
subspecies	Pasteurella multocida subsp. multocida	4	0	44283
subspecies	Lactobacillus paracasei subsp. paracasei	1	0	47714
subspecies	Staphylococcus saprophyticus subsp. saprophyticus	1	0	147452
subspecies	Leuconostoc gasicomitatum	1	0	115778
subspecies	Lactobacillus delbrueckii subsp. bulgaricus	1	1	1585
subspecies	Lactobacillus sakei subsp. sakei	1	0	214326
subspecies	Streptococcus gallolyticus subsp. gallolyticus	1	0	53354
subspecies	Bacillus subtilis subsp. natto	1	0	86029
strain	Achromobacter xylosoxidans NBRC 15126 = ATCC 27061	1218814	1218814	1216976
strain	Moraxella catarrhalis RH4	2534	2534	749219
strain	Mycoplasma hyopneumoniae J	1072	1072	262719
strain	Bacillus thuringiensis MC28	681	681	1195464
strain	Mycoplasma hyopneumoniae 7448	566	566	262722
strain	Lawsonia intracellularis N343	522	522	1234378
strain	Verminephrobacter eiseniae EF01-2	492	492	391735
strain	Serratia marcescens FGI94	453	453	1249634
strain	Prevotella melaninogenica ATCC 25845	436	436	553174
strain	Corynebacterium aurimucosum ATCC 700975	400	400	548476
strain	Helicobacter bizzozeronii CIII-1	375	375	1002804
strain	Aeromonas hydrophila ML09-119	342	342	1288394
strain	Streptococcus suis JS14	317	317	945704
strain	Haemophilus influenzae 86-028NP	316	316	281310
strain	Rothia mucilaginosa DY-18	301	301	680646
strain	Natrialba magadii ATCC 43099	294	294	547559
strain	Pseudomonas syringae pv. phaseolicola 1448A	265	265	264730
strain	Streptococcus parasanguinis FW213	249	249	1114965
strain	Streptococcus parasanguinis ATCC 15912	247	247	760570
strain	Streptococcus oralis Uo5	226	226	927666
strain	Sulfolobus islandicus M.16.27	213	213	427318
strain	Streptococcus mitis B6	200	200	365659
strain	Borrelia duttonii Ly	187	187	412419
strain	Helicobacter cetorum MIT 99-5656	186	186	1163745
strain	Methylobacterium radiotolerans JCM 2831	186	186	426355
strain	Haemophilus parainfluenzae T3T1	184	184	862965
strain	Mycoplasma ovis str. Michigan	161	161	1415773
strain	Lactobacillus rhamnosus LOCK900	155	155	1316933
strain	Haemophilus influenzae KR494	145	145	1334187
strain	Neisseria lactamica 020-06	119	119	489653
strain	Lactobacillus rhamnosus GG	117	117	568703
strain	Haemophilus influenzae PittEE	107	107	374930
strain	Rhodopseudomonas palustris BisB5	100	100	316057
strain	Streptococcus pseudopneumoniae IS7493	99	99	1054460
strain	Mycoplasma hyopneumoniae 7422	97	97	754503
strain	Borrelia crocidurae str. Achema	96	96	1155096
strain	Serratia marcescens WW4	90	90	435998
strain	Bacillus infantis NRRL B-14911	90	90	1367477
strain	Dickeya dadantii 3937	86	86	198628
strain	Proteus mirabilis BB2000	85	85	1266738
strain	Streptococcus salivarius JIM8777	82	82	347253
strain	Beijerinckia indica subsp. indica ATCC 9039	80	80	395963
strain	Veillonella parvula DSM 2008	80	80	479436
strain	Streptococcus gordonii str. Challis substr. CH1	79	79	467705
strain	Haemophilus influenzae PittGG	75	75	374931
strain	Haemophilus influenzae 10810	75	75	862964
strain	Borrelia valaisiana VS116	72	72	445987
strain	Escherichia coli O157:H7 str. EC4115	67	67	444450
strain	Bacteroides helcogenes P 36-108	67	67	693979
strain	Haemophilus somnus 129PT	67	67	205914
strain	Haemophilus influenzae R2846	65	65	262727
strain	Corynebacterium resistens DSM 45100	59	59	662755
strain	Prevotella denticola F0289	58	58	767031
strain	Haliangium ochraceum DSM 14365	58	58	502025
strain	Mycoplasma hyopneumoniae 232	51	51	295358
strain	Morganella morganii subsp. morganii KT	49	49	1124991
strain	Enterococcus faecalis V583	48	48	226185
strain	Yersinia enterocolitica subsp. palearctica 105.5R(r)	48	48	994476
strain	Haemophilus influenzae R2866	47	47	262728
strain	Mycoplasma hyorhinis HUB-1	46	46	872331
strain	Lactobacillus gasseri ATCC 33323	46	46	324831
strain	Haemophilus influenzae F3047	45	45	935897
strain	Fusobacterium nucleatum subsp. vincentii 3_1_36A2	43	43	469604
strain	Buchnera aphidicola BCc	40	40	372461
strain	Providencia stuartii MRSN 2154	40	40	1157951
strain	Proteus mirabilis HI4320	39	39	529507
strain	Sinorhizobium fredii NGR234	38	38	394
strain	Streptococcus agalactiae 2603V/R	37	37	208435
strain	Enterobacter cloacae subsp. cloacae NCTC 9394	37	37	718254
strain	Streptococcus salivarius CCHSS3	36	36	1048332
strain	Lactobacillus sanfranciscensis TMW 1.1304	35	35	714313
strain	Natronococcus occultus SP4	35	35	694430
strain	Rhizobium/Agrobacterium group	35	1	227290
strain	Rothia dentocariosa ATCC 17931	33	33	762948
strain	Rickettsia africae ESF-5	33	33	347255
strain	Helicobacter pylori B38	33	33	592205
strain	Rhizobium leguminosarum bv. viciae 3841	32	32	216596
strain	Halovivax ruber XH-70	31	31	797302
strain	Molluscum contagiosum virus subtype 1	30	30	10280
strain	Haemophilus influenzae Rd KW20	30	30	71421
strain	Neisseria meningitidis serogroup C	30	2	135720
strain	Corynebacterium callunae DSM 20147	30	30	1121353
strain	Treponema pedis str. T A4	29	29	1291379
strain	Haemophilus influenzae F3031	28	28	866630
strain	Geobacillus thermoleovorans CCB_US3_UF5	27	27	1111068
strain	Pseudomonas aeruginosa PA7	26	26	381754
strain	Streptococcus sanguinis SK36	26	26	388919
strain	Paenibacillus mucilaginosus K02	25	25	997761
strain	Pseudomonas fluorescens A506	24	24	1037911
strain	Oscillatoria acuminata PCC 6304	24	24	56110
strain	Streptococcus salivarius 57.I	24	24	1046629
strain	Serratia plymuthica S13	23	23	1348660
strain	Prevotella sp. oral taxon 299 str. F0039	23	23	575614
strain	Filifactor alocis ATCC 35896	23	23	546269
strain	Stenotrophomonas maltophilia K279a	23	23	522373
strain	Enterococcus faecalis 62	23	23	936153
strain	Xanthomonas campestris pv. raphani 756C	22	22	990315
strain	Streptococcus oligofermentans AS 1.3089	22	22	1302863
strain	Fusobacterium nucleatum subsp. animalis 4_8	21	21	469607
strain	Streptococcus anginosus C1051	21	21	862970
strain	Streptococcus anginosus C238	21	21	862971
strain	Finegoldia magna ATCC 29328	20	20	334413
strain	Stenotrophomonas maltophilia D457	19	19	1163399
strain	Roseburia hominis A2-183	19	19	585394
strain	Candidatus Liberibacter americanus str. Sao Paulo	19	19	1261131
strain	Acinetobacter baumannii ACICU	18	18	405416
strain	Corynebacterium diphtheriae PW8	17	17	698964
strain	Methanobrevibacter smithii ATCC 35061	17	17	420247
strain	Nitrobacter hamburgensis X14	16	16	323097
strain	Neisseria meningitidis 053442	16	16	374833
strain	Burkholderia mallei NCTC 10247	16	16	320389
strain	Neisseria meningitidis alpha14	16	16	662598
strain	Prevotella intermedia 17	15	15	246198
strain	Chamaesiphon minutus PCC 6605	15	15	1173020
strain	Tannerella forsythia ATCC 43037	15	15	203275
strain	Capnocytophaga ochracea DSM 7271	15	15	521097
strain	Pyrolobus fumarii 1A	15	15	694429
strain	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	14	14	272620
strain	Stenotrophomonas maltophilia R551-3	14	14	391008
strain	Thermodesulfobacterium geofontis OPF15	14	14	795359
strain	Klebsiella pneumoniae CG43	14	14	1244085
strain	Pseudomonas putida DOT-T1E	14	14	1196325
strain	Mycoplasma suis str. Illinois	14	14	768700
strain	Neisseria meningitidis serogroup B	13	7	491
strain	Staphylococcus epidermidis ATCC 12228	13	13	176280
strain	Mycoplasma hyopneumoniae 168	13	4	907287
strain	Yersinia pseudotuberculosis YPIII	13	13	502800
strain	Neisseria meningitidis G2136	13	13	935599
strain	Treponema denticola ATCC 35405	12	12	243275
strain	Pseudomonas fluorescens SBW25	12	12	216595
strain	Acinetobacter baumannii MDR-TJ	12	12	889738
strain	Sorangium cellulosum So0157-2	11	11	1254432
strain	Burkholderia mallei NCTC 10229	11	11	412022
strain	Pseudoxanthomonas spadix BD-a59	11	11	1045855
strain	Neisseria meningitidis WUE 2594	11	11	942513
strain	Neisseria gonorrhoeae TCDC-NG08107	11	11	940296
strain	Chromobacterium violaceum ATCC 12472	11	11	243365
strain	Mycoplasma cynos C142	11	11	1246955
strain	Candidatus Hodgkinia cicadicola Dsem	11	11	573234
strain	Staphylococcus epidermidis RP62A	10	10	176279
strain	Atopobium parvulum DSM 20469	10	10	521095
strain	Neisseria meningitidis Z2491	10	10	122587
strain	Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2	10	10	511995
strain	Thermoanaerobacter wiegelii Rt8.B1	10	10	697303
strain	Stigmatella aurantiaca DW4/3-1	10	10	378806
strain	Leptotrichia buccalis C-1013-b	10	10	523794
strain	Escherichia coli JJ1886	10	10	1355100
strain	Oscillatoria nigro-viridis PCC 7112	9	9	179408
strain	Mycoplasma hyopneumoniae 168-L	9	9	1116211
strain	Enterobacter cloacae subsp. cloacae ENHKU01	9	9	1211025
strain	Campylobacter concisus 13826	9	9	360104
strain	Eggerthella lenta DSM 2243	9	9	479437
strain	Mycoplasma hyorhinis SK76	9	9	1118964
strain	Aggregatibacter aphrophilus NJ8700	9	9	634176
strain	Neisseria gonorrhoeae FA 1090	9	9	242231
strain	Brachyspira murdochii DSM 12563	9	9	526224
strain	Neisseria meningitidis 8013	9	9	604162
strain	Lactobacillus ruminis ATCC 27782	9	9	1069534
strain	Bacillus cereus Q1	8	8	361100
strain	Porphyromonas gingivalis TDC60	8	8	1030843
strain	Prevotella dentalis DSM 3688	8	8	908937
strain	Lactobacillus crispatus ST1	8	8	748671
strain	Yersinia pseudotuberculosis IP 31758	8	8	349747
strain	Neisseria meningitidis M01-240355	8	8	935588
strain	Microlunatus phosphovorus NM-1	8	8	1032480
strain	Bacillus thuringiensis YBT-1518	8	8	529122
strain	Acinetobacter baumannii ATCC 17978	8	8	400667
strain	Methanomethylovorans hollandica DSM 15978	8	8	867904
strain	Mycoplasma genitalium M6282	8	8	662946
strain	Fusobacterium nucleatum subsp. nucleatum ATCC 25586	8	8	190304
strain	Parachlamydia acanthamoebae UV-7	8	8	765952
strain	Cryptobacterium curtum DSM 15641	8	8	469378
strain	Sorangium cellulosum So ce56	8	8	448385
strain	Xanthomonas campestris pv. campestris str. B100	7	7	509169
strain	Streptococcus agalactiae 09mas018883	7	7	1309806
strain	Caldicellulosiruptor saccharolyticus DSM 8903	7	7	351627
strain	Acidiphilium multivorum AIU301	7	7	926570
strain	Borrelia burgdorferi N40	7	7	521007
strain	Escherichia coli 042	7	7	216592
strain	Pseudomonas aeruginosa NCGM2.S1	7	7	1089456
strain	Streptomyces cattleya NRRL 8057 = DSM 46488	7	7	1003195
strain	Cellulophaga algicola DSM 14237	7	7	688270
strain	Mycoplasma mycoides subsp. mycoides SC str. PG1	7	7	272632
strain	Methanosarcina barkeri str. Fusaro	7	7	269797
strain	Streptococcus intermedius JTH08	7	7	591365
strain	Mycoplasma pulmonis UAB CTIP	6	6	272635
strain	Neisseria meningitidis alpha710	6	6	630588
strain	Neisseria meningitidis M04-240196	6	6	935593
strain	Mannheimia haemolytica USDA-ARS-USMARC-185	6	6	1249526
strain	Escherichia coli SMS-3-5	6	6	439855
strain	Streptococcus intermedius C270	6	6	862966
strain	Methylobacterium nodulans ORS 2060	6	6	460265
strain	Escherichia coli ETEC H10407	6	6	316401
strain	Prevotella ruminicola 23	6	6	264731
strain	Mycoplasma conjunctivae HRC/581	6	6	572263
strain	Microcystis aeruginosa NIES-843	6	6	449447
strain	Streptococcus pneumoniae SPNA45	6	6	869309
strain	Staphylococcus aureus subsp. aureus USA300	6	6	367830
strain	Corynebacterium jeikeium K411	6	6	306537
strain	Klebsiella pneumoniae 342	6	6	507522
strain	Methanococcus aeolicus Nankai-3	6	6	419665
strain	Enterococcus faecalis str. Symbioflor 1	6	6	1261557
strain	Streptococcus pneumoniae G54	6	6	512566
strain	Porphyromonas gingivalis ATCC 33277	6	6	431947
strain	Cronobacter sakazakii SP291	6	6	956149
strain	Escherichia coli UMN026	6	6	585056
strain	Methanobrevibacter ruminantium M1	6	6	634498
strain	Escherichia coli O127:H6 str. E2348/69	5	5	574521
strain	Candidatus Sulcia muelleri GWSS	5	5	444179
strain	Bradyrhizobium oligotrophicum S58	5	5	1245469
strain	Herbaspirillum seropedicae SmR1	5	5	757424
strain	Enterobacter cloacae subsp. dissolvens SDM	5	5	1104326
strain	Candidatus Carsonella ruddii HC isolate Thao2000	5	5	1202538
strain	Methanosaeta harundinacea 6Ac	5	5	1110509
strain	Psychromonas ingrahamii 37	5	5	357804
strain	Thermoanaerobacter tengcongensis MB4	5	5	273068
strain	Collimonas fungivorans Ter331	5	5	1005048
strain	Acinetobacter baumannii D1279779	5	5	945556
strain	Streptococcus dysgalactiae subsp. equisimilis RE378	5	5	617121
strain	Bacillus pseudofirmus OF4	4	4	398511
strain	Serratia liquefaciens ATCC 27592	4	4	1346614
strain	Escherichia coli E24377A	4	4	331111
strain	Catenulispora acidiphila DSM 44928	4	4	479433
strain	Acinetobacter baumannii 1656-2	4	4	696749
strain	Citrobacter koseri ATCC BAA-895	4	4	290338
strain	Corynebacterium diphtheriae BH8	4	4	698973
strain	Corynebacterium diphtheriae INCA 402	4	4	698972
strain	Mycoplasma arthritidis 158L3-1	4	4	243272
strain	Pseudomonas brassicacearum subsp. brassicacearum NFM421	4	4	994484
strain	Streptococcus agalactiae NEM316	4	4	211110
strain	Bacteroides fragilis YCH46	4	4	295405
strain	Bifidobacterium dentium Bd1	4	4	401473
strain	Methanothermus fervidus DSM 2088	4	4	523846
strain	Streptococcus pneumoniae 670-6B	4	4	189423
strain	Streptococcus intermedius B196	4	4	862967
strain	Pseudomonas aeruginosa MTB-1	4	4	1415629
strain	Methanosalsum zhilinae DSM 4017	4	4	679901
strain	Achromobacter xylosoxidans NH44784-1996	4	4	1167634
strain	Enterococcus faecium Aus0085	4	4	1305849
strain	Pantoea ananatis AJ13355	4	4	932677
strain	Streptococcus pneumoniae Hungary19A-6	4	4	487214
strain	Streptococcus pneumoniae A026	3	3	1408179
strain	Mycoplasma wenyonii str. Massachusetts	3	3	1197325
strain	Bacteroides salanitronis DSM 18170	3	3	667015
strain	Stenotrophomonas maltophilia JV3	3	3	868597
strain	Acinetobacter baumannii AYE	3	3	509173
strain	Corynebacterium halotolerans YIM 70093 = DSM 44683	3	3	1121362
strain	Streptococcus pneumoniae TIGR4	3	3	170187
strain	Pseudomonas aeruginosa LESB58	3	3	557722
strain	Neisseria gonorrhoeae NCCP11945	3	3	521006
strain	Helicobacter cetorum MIT 00-7128	3	3	182217
strain	Cylindrospermum stagnale PCC 7417	3	3	56107
strain	Shewanella violacea DSS12	3	3	637905
strain	Clostridiales genomosp. BVAB3 str. UPII9-5	3	3	699246
strain	Pelobacter propionicus DSM 2379	3	3	338966
strain	Klebsiella pneumoniae subsp. pneumoniae HS11286	3	3	1125630
strain	Corynebacterium variabile DSM 44702	3	3	858619
strain	Paenibacillus mucilaginosus 3016	3	3	1116391
strain	Haemophilus parasuis ZJ0906	3	3	1322346
strain	Acinetobacter baumannii TCDC-AB0715	3	3	980514
strain	Neisseria meningitidis FAM18	3	3	272831
strain	Staphylococcus aureus CA-347	3	3	1323661
strain	Pelodictyon phaeoclathratiforme BU-1	3	3	324925
strain	Actinobacillus suis H91-0380	3	3	696748
strain	Helicobacter pylori J99	3	3	85963
strain	Brachyspira hyodysenteriae WA1	3	3	565034
strain	Streptococcus equi subsp. zooepidemicus ATCC 35246	3	3	1051072
strain	Prochlorococcus marinus str. MIT 9215	3	3	93060
strain	Streptococcus pneumoniae ATCC 700669	3	3	561276
strain	Actinoplanes friuliensis DSM 7358	3	3	1246995
strain	Staphylococcus haemolyticus JCSC1435	3	3	279808
strain	Streptococcus pneumoniae P1031	3	3	488223
strain	Enterobacter aerogenes EA1509E	3	3	935296
strain	Streptococcus pneumoniae JJA	3	3	488222
strain	Streptococcus pneumoniae INV200	3	3	869216
strain	Streptococcus agalactiae ILRI112	2	2	1318615
strain	Klebsiella pneumoniae KCTC 2242	2	2	1049565
strain	Escherichia coli UTI89	2	2	364106
strain	Staphylococcus aureus subsp. aureus 11819-97	2	2	1123523
strain	Mycoplasma bovis Hubei-1	2	2	956483
strain	Streptococcus suis TL13	2	2	1276647
strain	Influenza A virus (A/New York/392/2004(H3N2))	2	2	335341
strain	Burkholderia phytofirmans PsJN	2	2	398527
strain	Porphyromonas gingivalis W83	2	2	242619
strain	Streptococcus pyogenes serotype M12	2	2	342023
strain	Enterobacter asburiae LF7a	2	2	640513
strain	Vibrio parahaemolyticus RIMD 2210633	2	2	223926
strain	Streptococcus suis T15	2	2	1340847
strain	Bacteroides fragilis NCTC 9343	2	2	272559
strain	Enterococcus faecalis D32	2	2	1206105
strain	Megasphaera elsdenii DSM 20460	2	2	1064535
strain	Butyrivibrio proteoclasticus B316	2	2	515622
strain	Phycisphaera mikurensis NBRC 102666	2	2	1142394
strain	Candidatus Liberibacter solanacearum CLso-ZC1	2	2	658172
strain	Mycoplasma gallisepticum S6	2	2	1006581
strain	Raoultella ornithinolytica B6	2	2	1286170
strain	Edwardsiella ictaluri 93-146	2	2	634503
strain	Pseudomonas protegens Pf-5	2	2	220664
strain	Tropheryma whipplei str. Twist	2	2	203267
strain	Desulfococcus oleovorans Hxd3	2	2	96561
strain	Escherichia coli HS	2	2	331112
strain	Pseudomonas mendocina NK-01	2	2	1001585
strain	Haemophilus ducreyi 35000HP	2	2	233412
strain	Enterococcus hirae ATCC 9790	2	2	768486
strain	Pseudomonas aeruginosa PAO1	2	2	208964
strain	Escherichia coli P12b	2	2	910348
strain	Escherichia coli ATCC 8739	2	2	481805
strain	Pseudomonas mendocina ymp	2	2	399739
strain	Mycoplasma hyorhinis MCLD	2	2	936139
strain	Cupriavidus metallidurans CH34	2	2	266264
strain	Capnocytophaga canimorsus Cc5	2	2	860228
strain	Ilyobacter polytropus DSM 2926	2	2	572544
strain	Oscillibacter valericigenes Sjm18-20	2	2	693746
strain	Streptosporangium roseum DSM 43021	2	2	479432
strain	Trichodesmium erythraeum IMS101	2	2	203124
strain	Acinetobacter baumannii AB307-0294	2	2	557600
strain	Achromobacter xylosoxidans A8	2	2	762376
strain	Corynebacterium efficiens YS-314	2	2	196164
strain	Streptococcus agalactiae ILRI005	2	2	1309807
strain	Haloquadratum walsbyi DSM 16790	2	2	362976
strain	Pseudomonas aeruginosa RP73	2	2	1340851
strain	Kocuria rhizophila DC2201	2	2	378753
strain	Escherichia coli ABU 83972	2	2	655817
strain	Hydrogenobacter thermophilus TK-6	2	2	608538
strain	Flavobacterium branchiophilum FL-15	2	2	1034807
strain	Acinetobacter baumannii BJAB0715	2	2	1096996
strain	Streptococcus thermophilus LMD-9	2	2	322159
strain	Staphylococcus aureus subsp. aureus CN1	2	2	1193576
strain	Natronomonas moolapensis 8.8.11	2	2	268739
strain	Staphylococcus aureus subsp. aureus str. JKD6008	2	2	546342
strain	Caldicellulosiruptor kronotskyensis 2002	2	2	632348
strain	Pandoraea pnomenusa 3kgm	2	2	1416914
strain	Aggregatibacter actinomycetemcomitans D11S-1	2	2	668336
strain	Methanocorpusculum labreanum Z	2	2	410358
strain	Shigella flexneri 2002017	2	2	591020
strain	Streptobacillus moniliformis DSM 12112	2	2	519441
strain	Pasteurella multocida subsp. multocida str. HN06	2	2	1132496
strain	Serratia proteamaculans 568	2	2	399741
strain	Ralstonia solanacearum PSI07	2	2	859657
strain	Sinorhizobium fredii USDA 257	2	2	1185652
strain	Mesotoga prima MesG1.Ag.4.2	2	2	660470
strain	Salmonella enterica subsp. enterica serovar Cubana str. CFSAN002050	2	2	1271863
strain	Ralstonia eutropha JMP134	2	2	264198
strain	Streptococcus pyogenes M1 GAS	2	2	160490
strain	Streptomyces scabiei 87.22	2	2	680198
strain	Xanthomonas campestris pv. vesicatoria str. 85-10	2	2	316273
strain	Escherichia coli Xuzhou21	2	2	741093
strain	Candidatus Carsonella ruddii CE isolate Thao2000	2	2	1202536
strain	Streptococcus pneumoniae 70585	2	2	488221
strain	Thioflavicoccus mobilis 8321	2	2	765912
strain	Klebsiella oxytoca E718	2	2	1191061
strain	Lactobacillus johnsonii DPC 6026	2	2	909954
strain	Staphylococcus aureus M1	2	2	1305598
strain	Burkholderia pseudomallei 668	2	2	320373
strain	Pasteurella multocida subsp. multocida str. Pm70	2	2	272843
strain	Gallibacterium anatis UMN179	2	2	1005058
strain	Streptococcus thermophilus MN-ZLW-002	2	2	1187956
strain	Mannheimia haemolytica D174	2	2	1311760
strain	Coxiella burnetii RSA 493	2	2	227377
strain	Streptococcus pneumoniae gamPNI0373	2	2	697283
strain	Escherichia coli 536	2	2	362663
strain	Acinetobacter baumannii BJAB0868	2	2	1096997
strain	Streptococcus pneumoniae TCH8431/19A	2	2	525381
strain	Borrelia recurrentis A1	2	2	412418
strain	Hahella chejuensis KCTC 2396	2	2	349521
strain	Acinetobacter baumannii SDF	2	2	509170
strain	Gardnerella vaginalis 409-05	2	2	553190
strain	Bacillus cereus E33L	2	2	288681
strain	Ruminococcus albus 7	2	2	697329
strain	Acidiphilium cryptum JF-5	2	2	349163
strain	Shimwellia blattae DSM 4481 = NBRC 105725	1	1	630626
strain	Crinalium epipsammum PCC 9333	1	1	1173022
strain	Natranaerobius thermophilus JW/NM-WN-LF	1	1	457570
strain	Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)	1	1	572265
strain	Streptomyces avermitilis MA-4680 = NBRC 14893	1	1	227882
strain	Monkeypox virus Zaire-96-I-16	1	1	619591
strain	Enterobacter lignolyticus SCF1	1	1	701347
strain	Streptococcus suis 98HAH33	1	1	391296
strain	Mycoplasma suis KI3806	1	1	708248
strain	Leptospira interrogans serovar Lai str. 56601	1	1	189518
strain	Streptococcus pneumoniae CGSP14	1	1	516950
strain	Dechlorosoma suillum PS	1	1	640081
strain	Pseudomonas entomophila L48	1	1	384676
strain	Campylobacter hominis ATCC BAA-381	1	1	360107
strain	Sphaerobacter thermophilus DSM 20745	1	1	479434
strain	Psychroflexus torquis ATCC 700755	1	1	313595
strain	Mesorhizobium opportunistum WSM2075	1	1	536019
strain	Onion yellows phytoplasma OY-M	1	1	262768
strain	Verrucosispora maris AB-18-032	1	1	263358
strain	Streptococcus macedonicus ACA-DC 198	1	1	1116231
strain	Aleutian mink disease virus	1	1	28314
strain	Neisseria meningitidis NZ-05/33	1	1	935589
strain	Clostridium botulinum F	1	1	36831
strain	Sphaerochaeta pleomorpha str. Grapes	1	1	158190
strain	Corynebacterium urealyticum DSM 7109	1	1	504474
strain	Bacillus weihenstephanensis KBAB4	1	1	315730
strain	Treponema primitia ZAS-2	1	1	545694
strain	Enterobacter cloacae subsp. cloacae ATCC 13047	1	1	716541
strain	Bacillus cereus ATCC 14579	1	1	226900
strain	Burkholderia thailandensis E264	1	1	271848
strain	Lactobacillus paracasei subsp. paracasei 8700:2	1	1	537973
strain	Citrobacter rodentium ICC168	1	1	637910
strain	Kytococcus sedentarius DSM 20547	1	1	478801
strain	Thermus scotoductus SA-01	1	1	743525
strain	Streptococcus mutans NN2025	1	1	511691
strain	Acinetobacter baumannii BJAB07104	1	1	1096995
strain	Metallosphaera cuprina Ar-4	1	1	1006006
strain	Xanthobacter autotrophicus Py2	1	1	78245
strain	Sebaldella termitidis ATCC 33386	1	1	526218
strain	Croceibacter atlanticus HTCC2559	1	1	216432
strain	Methylacidiphilum infernorum V4	1	1	481448
strain	Clostridium cellulolyticum H10	1	1	394503
strain	Paenibacillus polymyxa SC2	1	1	886882
strain	Escherichia coli O83:H1 str. NRG 857C	1	1	685038
strain	Leuconostoc gasicomitatum LMG 18811	1	1	762550
strain	Sphaerochaeta coccoides DSM 17374	1	1	760011
strain	Lactobacillus plantarum 16	1	1	1327988
strain	Kineococcus radiotolerans SRS30216 = ATCC BAA-149	1	1	266940
strain	Blattabacterium sp. (Mastotermes darwiniensis) str. MADAR	1	1	1074889
strain	Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)	1	1	713602
strain	Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305	1	1	342451
strain	Candidatus Portiera aleyrodidarum BT-B-HRs	1	1	1206109
strain	Corynebacterium diphtheriae NCTC 13129	1	1	257309
strain	Arthrospira platensis NIES-39	1	1	696747
strain	Mesorhizobium loti MAFF303099	1	1	266835
strain	Blattabacterium sp. (Blatta orientalis) str. Tarazona	1	1	1072467
strain	Burkholderiales Genera incertae sedis	1	1	224471
strain	Bacillus cellulosilyticus DSM 2522	1	1	649639
strain	Chlorobium tepidum TLS	1	1	194439
strain	Vibrio parahaemolyticus O1:Kuk str. FDA_R31	1	1	1338034
strain	Planctomyces brasiliensis DSM 5305	1	1	756272
strain	Candidatus Carsonella ruddii PC isolate NHV	1	1	1202540
strain	Bacillus subtilis subsp. natto BEST195	1	1	645657
strain	Arcanobacterium haemolyticum DSM 20595	1	1	644284
strain	Borrelia turicatae 91E135	1	1	314724
strain	Streptococcus pneumoniae ST556	1	1	1130804
strain	Streptococcus gallolyticus subsp. gallolyticus ATCC 43143	1	1	981539
strain	Tsukamurella paurometabola DSM 20162	1	1	521096
strain	Parabacteroides distasonis ATCC 8503	1	1	435591
strain	Kitasatospora setae KM-6054	1	1	452652
strain	Rahnella aquatilis CIP 78.65 = ATCC 33071	1	1	745277
strain	Helicobacter pylori 908	1	1	869727
strain	Nostoc punctiforme PCC 73102	1	1	63737
strain	Burkholderia cenocepacia J2315	1	1	216591
strain	Candidatus Accumulibacter phosphatis clade IIA str. UW-1	1	1	522306
strain	Xylella fastidiosa M12	1	1	405440
strain	Nitrosomonas eutropha C91	1	1	335283
strain	Corynebacterium diphtheriae CDCE 8392	1	1	698965
strain	Escherichia coli KO11FL	1	1	595495
strain	Acinetobacter baumannii ZW85-1	1	1	1400867
strain	Nautilia profundicola AmH	1	1	598659
strain	Comamonas testosteroni CNB-2	1	1	688245
strain	Xanthomonas oryzae pv. oryzicola BLS256	1	1	383407
strain	Streptococcus dysgalactiae subsp. equisimilis GGS_124	1	1	486410
strain	Escherichia coli O104:H4 str. 2009EL-2050	1	1	1134782
strain	Bordetella petrii DSM 12804	1	1	340100
strain	Marivirga tractuosa DSM 4126	1	1	643867
strain	Shewanella loihica PV-4	1	1	323850
strain	Lactobacillus sakei subsp. sakei 23K	1	1	314315
strain	Methanococcus vannielii SB	1	1	406327
strain	Methanosarcina acetivorans C2A	1	1	188937
strain	Chlamydia pecorum PV3056/3	1	1	1234367
strain	Flavobacterium psychrophilum JIP02/86	1	1	402612
strain	Variovorax paradoxus B4	1	1	1246301
no rank	cellular organisms	1252733	318	131567
no rank	ssDNA viruses	69666	0	29258
no rank	dsDNA viruses, no RNA stage	5780	21	35237
no rank	ssRNA viruses	45	0	439488
no rank	ssRNA negative-strand viruses	24	0	35301
no rank	ssRNA positive-strand viruses, no DNA stage	21	0	35278
no rank	Shrimp white spot syndrome virus	20	20	92652
no rank	Clostridiales incertae sedis	20	0	538999
no rank	unclassified Micrococcineae	16	0	577468
no rank	unclassified Rhizobiales	11	0	119042
no rank	unclassified Mononegavirales	11	0	644608
no rank	unclassified Siphoviridae	10	4	196894
no rank	unclassified Ascovirus	8	0	328613
no rank	unclassified Gammaproteobacteria	8	0	118884
no rank	unclassified Betabaculovirus	6	0	342107
no rank	unclassified phages	4	0	12333
no rank	unassigned Betaherpesvirinae	3	0	686603
no rank	Enterobacteria phage G4 clade	3	0	374842
no rank	unclassified Betaproteobacteria	3	0	119066
no rank	unclassified Clostridiales	3	0	186813
no rank	unclassified Bacteria	2	0	2323
no rank	unclassified Myoviridae	2	0	196896
no rank	Small anellovirus 1	2	2	289366
no rank	unclassified Anelloviridae	2	0	363628
no rank	unclassified Nucleopolyhedrovirus	2	0	328432
no rank	non-primate mammal papillomaviruses	1	0	333938
no rank	Single stranded DNA satellites	1	0	361688
no rank	Satellite Nucleic Acids	1	0	198601
no rank	unclassified Burkholderiales	1	0	119065
no rank	unclassified Begomovirus-associated DNA beta-like sequences	1	0	361689
no rank	Betasatellites	1	0	190729
no rank	Satellites	1	0	12877
no rank	unclassified Tunalikevirus	1	0	355245
no rank	unclassified Chlorovirus	1	0	346674
no rank	unclassified dsDNA viruses	1	0	51368
no rank	unclassified Epsilonproteobacteria	1	0	34035
no rank	unclassified Papillomaviridae	1	0	333774
no rank	Bettongia penicillata papillomavirus 1	1	1	759701
no rank	unclassified Verrucomicrobia	1	0	326457
unclassified	unclassified	5047784	5047784	0
