LEVEL	TAXA	ROLLUP	ASSIGNED	TAXID
	Actinobacteridae	59596	79	85003
	Coriobacterineae	364	0	255727
	Actinomycineae	34	0	85005
	Mobiluncus/Falcivibrio group	27	0	279916
	Nudivirus	25	0	483372
	Clostridiales genomosp. BVAB3	8	0	699245
	butyrate-producing bacterium SSC/2	5	5	245018
	Albidiferax	3	0	885497
	Krokinobacter	2	0	308112
	Acidimicrobineae	1	0	255726
root	root	1415235	9770	1
superkingdom	Bacteria	1356745	14800	2
superkingdom	Viruses	47232	0	10239
superkingdom	Archaea	1206	0	2157
superphylum	Bacteroidetes/Chlorobi group	13102	10	68336
superphylum	Chlamydiae/Verrucomicrobia group	16	0	51290
superphylum	Fibrobacteres/Acidobacteria group	2	0	131550
phylum	Proteobacteria	1235675	15272	1224
phylum	Actinobacteria	60168	0	201174
phylum	Firmicutes	25063	1045	1239
phylum	Bacteroidetes	13088	936	976
phylum	Fusobacteria	3591	0	32066
phylum	Tenericutes	2954	0	544448
phylum	Euryarchaeota	1139	1062	28890
phylum	Spirochaetes	628	0	203691
phylum	Candidatus Saccharibacteria	280	102	95818
phylum	Cyanobacteria	227	73	1117
phylum	Synergistetes	80	0	508458
phylum	Crenarchaeota	67	0	28889
phylum	Deinococcus-Thermus	59	0	1297
phylum	Chloroflexi	24	0	200795
phylum	Planctomycetes	18	0	203682
phylum	Dictyoglomi	11	0	68297
phylum	Thermotogae	11	0	200918
phylum	Thermodesulfobacteria	10	0	200940
phylum	Chrysiogenetes	9	0	200938
phylum	Chlamydiae	9	0	204428
phylum	Verrucomicrobia	7	0	74201
phylum	Nitrospirae	5	0	40117
phylum	Aquificae	3	0	200783
phylum	Ignavibacteriae	2	0	1134404
phylum	Acidobacteria	2	0	57723
phylum	Elusimicrobia	2	0	74152
phylum	Deferribacteres	2	0	200930
phylum	Chlorobi	2	0	1090
subphylum	delta/epsilon subdivisions	314	0	68525
class	Betaproteobacteria	831642	3481	28216
class	Gammaproteobacteria	381362	16407	1236
class	Actinobacteria	60168	191	1760
class	Bacilli	21186	428	91061
class	Bacteroidia	11162	0	200643
class	Alphaproteobacteria	7085	170	28211
class	Fusobacteriia	3591	0	203490
class	Mollicutes	2954	1	31969
class	Negativicutes	1634	0	909932
class	Clostridia	1183	34	186801
class	Flavobacteriia	723	0	117743
class	Spirochaetia	628	0	203692
class	Coriobacteridae	364	0	84998
class	Cytophagia	234	0	768503
class	Epsilonproteobacteria	186	2	29547
class	Deltaproteobacteria	128	3	28221
class	Synergistia	80	0	649775
class	Thermoprotei	67	0	183924
class	Deinococci	59	1	188787
class	Methanococci	39	0	183939
class	Sphingobacteriia	27	0	117747
class	Halobacteria	24	0	183963
class	Rubrobacteridae	16	0	84995
class	Erysipelotrichia	15	0	526524
class	Planctomycetia	12	0	203683
class	Dictyoglomia	11	0	203486
class	Thermotogae	11	0	188708
class	Thermodesulfobacteria	10	0	67799
class	Chrysiogenetes	9	0	118001
class	Chlamydiia	9	0	204429
class	Methanomicrobia	8	0	224756
class	Opitutae	7	0	414999
class	Methanobacteria	6	0	183925
class	Phycisphaerae	6	0	666505
class	Thermomicrobia	6	0	189775
class	Nitrospira	5	0	203693
class	Anaerolineae	5	0	292625
class	Chloroflexi	5	0	32061
class	Caldilineae	4	0	475962
class	Dehalococcoidia	4	0	301297
class	Aquificae	3	0	187857
class	Deferribacteres	2	0	68337
class	Acidobacteriia	2	0	204432
class	Chlorobia	2	0	191410
class	Elusimicrobia	2	0	641853
class	Ignavibacteria	2	0	795747
class	Acidimicrobidae	1	0	84992
subclass	Oscillatoriophycideae	117	17	1301283
subclass	Sphaerobacteridae	6	0	85000
order	Burkholderiales	794863	541	80840
order	Pseudomonadales	303475	114	72274
order	Actinomycetales	59361	5180	2037
order	Corynebacterineae	44486	2883	85007
order	Neisseriales	32806	0	206351
order	Pasteurellales	32583	0	135625
order	Enterobacteriales	23290	0	91347
order	Lactobacillales	14747	557	186826
order	Bacteroidales	11162	1291	171549
order	Rhizobiales	6191	161	356
order	Bacillales	6011	268	1385
order	Xanthomonadales	4924	0	135614
order	Micrococcineae	4824	184	85006
order	Propionibacterineae	4251	3	85009
order	Fusobacteriales	3591	35	203491
order	Mycoplasmatales	2935	0	2085
order	Nidovirales	2670	0	76804
order	Selenomonadales	1634	28	909929
order	Mononegavirales	1085	0	11157
order	Clostridiales	1078	169	186802
order	Flavobacteriales	723	155	200644
order	Spirochaetales	628	0	136
order	Methylophilales	410	0	206350
order	Sphingomonadales	373	11	204457
order	Coriobacteriales	364	0	84999
order	Cytophagales	234	2	768507
order	Streptosporangineae	201	1	85012
order	Oceanospirillales	178	3	135619
order	Campylobacterales	177	0	213849
order	Bifidobacteriales	156	0	85004
order	Streptomycineae	150	0	85011
order	Vibrionales	137	0	135623
order	Herpesvirales	119	0	548681
order	Aeromonadales	104	0	135624
order	Alteromonadales	90	14	135622
order	Caulobacterales	87	0	204458
order	Pseudonocardineae	83	0	85010
order	Synergistales	80	0	649776
order	Frankineae	74	1	85013
order	Rhodobacterales	73	0	204455
order	Thermoanaerobacterales	65	7	68295
order	Rhodospirillales	63	0	204441
order	Sulfolobales	62	0	2281
order	Chroococcales	59	15	1118
order	Micromonosporineae	59	0	85008
order	Caudovirales	53	0	28883
order	Rhodocyclales	49	0	206389
order	Rickettsiales	46	0	766
order	Picornavirales	42	0	464095
order	Magnetococcales	42	0	1191478
order	Oscillatoriales	41	0	1150
order	Methanococcales	39	0	2182
order	Deinococcales	37	0	118964
order	Desulfovibrionales	36	1	213115
order	Chromatiales	36	0	135613
order	Myxococcales	35	0	29
order	Legionellales	31	0	118969
order	Sphingobacteriales	27	0	200666
order	Halobacteriales	24	0	2235
order	Thermales	21	0	68933
order	Pleurocapsales	20	0	52604
order	Cardiobacteriales	19	0	135615
order	Desulfuromonadales	19	14	69541
order	Nostocales	17	1	1161
order	Erysipelotrichales	15	0	526525
order	Thiotrichales	14	0	72273
order	Desulfobacterales	14	0	213118
order	Acholeplasmatales	14	0	186329
order	Bdellovibrionales	12	0	213481
order	Planctomycetales	12	0	112
order	Dictyoglomales	11	0	203487
order	Thermotogales	11	0	2419
order	Rubrobacterales	10	0	84996
order	Methylococcales	10	0	135618
order	Thermodesulfobacteriales	10	0	188710
order	Chrysiogenales	9	0	189769
order	SAR11 cluster	9	1	54526
order	Chlamydiales	9	5	51291
order	Catenulisporineae	9	0	414714
order	Methanosarcinales	8	0	94695
order	Nautiliales	7	0	235899
order	Opitutales	7	0	415000
order	Solirubrobacterales	6	0	588673
order	Phycisphaerales	6	0	666506
order	Halanaerobiales	6	0	53433
order	Nitrosomonadales	6	0	32003
order	Kineosporiineae	6	0	622452
order	Sphaerobacterales	6	0	85001
order	Methanobacteriales	6	0	2158
order	Nitrospirales	5	0	189778
order	Anaerolineales	5	0	292629
order	Acidithiobacillales	5	0	225057
order	Desulfarculales	4	0	453227
order	Chloroflexales	4	0	32064
order	Hydrogenophilales	4	0	119069
order	Gallionellales	4	0	713636
order	Dehalococcoidales	4	0	1202465
order	Entomoplasmatales	4	0	186328
order	Caldilineales	4	0	475963
order	Glycomycineae	4	0	85014
order	Syntrophobacterales	4	0	213462
order	Thermoproteales	3	2	2266
order	Aquificales	3	0	32069
order	Parvularculales	3	0	255473
order	Chlorobiales	2	0	191411
order	Deferribacterales	2	0	191393
order	Acidobacteriales	2	0	204433
order	Desulfurococcales	2	0	114380
order	Ignavibacteriales	2	0	795748
order	Elusimicrobiales	2	0	641854
order	Acidimicrobiales	1	0	84993
order	Herpetosiphonales	1	0	189772
suborder	Cystobacterineae	16	0	80811
suborder	Sorangiineae	13	0	80812
suborder	Rubrobacterineae	10	0	255725
suborder	Nannocystineae	6	0	224462
suborder	Sphaerobacterineae	6	0	255728
family	Alcaligenaceae	786703	129	506
family	Moraxellaceae	268170	17421	468
family	Corynebacteriaceae	41032	0	1653
family	Pseudomonadaceae	35191	342	135621
family	Microviridae	34618	0	10841
family	Neisseriaceae	32806	2303	481
family	Pasteurellaceae	32583	8545	712
family	Enterobacteriaceae	23290	18102	543
family	Streptococcaceae	10882	63	1300
family	Baculoviridae	7414	0	10442
family	Prevotellaceae	5654	0	171552
family	Comamonadaceae	5189	132	80864
family	Xanthomonadaceae	4924	674	32033
family	Staphylococcaceae	4736	168	90964
family	Rhizobiaceae	4421	87	82115
family	Propionibacteriaceae	4123	8	31957
family	Porphyromonadaceae	3721	689	171551
family	Fusobacteriaceae	3079	16	203492
family	Micrococcaceae	3024	123	1268
family	Mycoplasmataceae	2935	1	2092
family	Coronaviridae	2670	0	11118
family	Lactobacillaceae	2320	69	33958
family	Veillonellaceae	1597	28	31977
family	Burkholderiaceae	1209	57	119060
family	Paramyxoviridae	1085	0	11158
family	Oxalobacteraceae	1067	760	75682
family	Methylobacteriaceae	992	0	119045
family	Enterococcaceae	759	19	81852
family	Spirochaetaceae	620	16	137
family	Flavobacteriaceae	550	99	49546
family	Clostridiales Family XI. Incertae Sedis	524	12	543310
family	Leptotrichiaceae	477	99	1129771
family	Poxviridae	452	0	10240
family	Bacillaceae	427	55	186817
family	Methylophilaceae	410	3	32011
family	Coriobacteriaceae	364	24	84107
family	Mycobacteriaceae	354	0	1762
family	Sphingomonadaceae	346	70	41297
family	Bradyrhizobiaceae	343	52	41294
family	Bacteroidaceae	330	0	815
family	Polydnaviridae	235	122	10482
family	Orthomyxoviridae	218	0	11308
family	Virgaviridae	207	0	675071
family	Leuconostocaceae	203	0	81850
family	Cytophagaceae	200	5	89373
family	Nocardiopsaceae	190	170	83676
family	Bifidobacteriaceae	156	7	31953
family	Streptomycetaceae	150	5	2062
family	Clostridiaceae	150	1	31979
family	Vibrionaceae	137	2	641
family	Campylobacteraceae	136	0	72294
family	Nocardiaceae	134	6	85025
family	Nocardioidaceae	125	0	85015
family	Aeromonadaceae	104	10	84642
family	Peptostreptococcaceae	100	2	186804
family	Herpesviridae	97	1	10292
family	Rikenellaceae	92	0	171550
family	Brucellaceae	89	4	118882
family	Caulobacteraceae	87	10	76892
family	Hahellaceae	83	0	224379
family	Pseudonocardiaceae	83	4	2070
family	Phyllobacteriaceae	81	0	69277
family	Synergistaceae	80	15	649777
family	Jonesiaceae	73	0	85022
family	Rhodobacteraceae	68	19	31989
family	Sulfolobaceae	62	0	118883
family	Micromonosporaceae	59	18	28056
family	Gordoniaceae	58	0	85026
family	Halomonadaceae	56	0	28256
family	Xanthobacteraceae	55	0	335928
family	Potyviridae	53	0	39729
family	Microbacteriaceae	51	5	85023
family	Rhodocyclaceae	49	3	75787
family	Rhodospirillaceae	49	0	41295
family	Dermacoccaceae	47	0	145357
family	Magnetococcaceae	42	0	1191479
family	Helicobacteraceae	41	0	72293
family	Secoviridae	40	0	675072
family	Paenibacillaceae	39	0	186822
family	Methanococcaceae	39	0	2183
family	Deinococcaceae	36	0	183710
family	Geodermatophilaceae	36	5	85030
family	Desulfovibrionaceae	35	0	194924
family	Actinomycetaceae	34	0	2049
family	Eubacteriaceae	31	4	186806
family	Shewanellaceae	30	0	267890
family	Hyphomicrobiaceae	30	0	45401
family	Alteromonadaceae	29	1	72275
family	Lachnospiraceae	29	0	186803
family	Ectothiorhodospiraceae	29	0	72276
family	Listeriaceae	28	0	186820
family	Siphoviridae	27	0	10699
family	Intrasporangiaceae	26	0	85021
family	Sanguibacteraceae	26	0	145360
family	Rickettsiaceae	26	0	775
family	Flammeovirgaceae	25	0	200667
family	Halobacteriaceae	24	0	2236
family	Ruminococcaceae	24	3	541000
family	Legionellaceae	23	0	444
family	Podoviridae	22	0	10744
family	Alloherpesviridae	22	0	548682
family	Thermaceae	21	0	188786
family	Carnobacteriaceae	20	0	186828
family	Cellulomonadaceae	20	0	85016
family	Thermoanaerobacteraceae	20	2	186814
family	Alcanivoracaceae	20	0	224372
family	Thermoanaerobacterales Family III. Incertae Sedis	19	0	543371
family	Cardiobacteriaceae	19	0	868
family	Anaplasmataceae	19	8	942
family	Phycodnaviridae	17	0	10501
family	Segniliparaceae	17	0	316606
family	Oscillospiraceae	17	0	216572
family	Thermodesulfobiaceae	17	0	227387
family	Myxococcaceae	16	0	31
family	Erythrobacteraceae	16	0	335929
family	Frankiaceae	16	0	74712
family	Oceanospirillaceae	16	0	135620
family	Dermabacteraceae	15	0	85020
family	Erysipelotrichaceae	15	0	128827
family	Sphingobacteriaceae	15	0	84566
family	Acholeplasmataceae	14	1	2146
family	Acetobacteraceae	14	0	433
family	Polyangiaceae	13	0	49
family	Peptococcaceae	13	4	186807
family	Nostocaceae	13	0	1162
family	Piscirickettsiaceae	12	0	135616
family	Planctomycetaceae	12	4	126
family	Thermotogaceae	11	7	188709
family	Dictyoglomaceae	11	0	203488
family	Blattabacteriaceae	11	0	39782
family	Nakamurellaceae	11	0	85031
family	Streptosporangiaceae	10	0	2004
family	Acidothermaceae	10	0	85032
family	Rubrobacteraceae	10	0	84997
family	Thermodesulfobacteriaceae	10	1	188711
family	Methylococcaceae	10	0	403
family	Catenulisporaceae	9	0	414877
family	Acidaminococcaceae	9	0	909930
family	Promicromonosporaceae	9	0	85017
family	Chrysiogenaceae	9	0	189770
family	Coxiellaceae	8	0	118968
family	Tsukamurellaceae	8	0	85028
family	Opitutaceae	7	0	134623
family	Methanosarcinaceae	7	0	2206
family	Desulfobacteraceae	7	4	213119
family	Desulfobulbaceae	7	2	213121
family	Nautiliaceae	7	0	224467
family	Saprospiraceae	7	0	89374
family	Chromatiaceae	7	2	1046
family	Rhodobiaceae	7	0	119043
family	Iridoviridae	7	0	10486
family	Cyclobacteriaceae	7	0	563798
family	Alicyclobacillaceae	7	0	186823
family	Brachyspiraceae	6	0	143786
family	Kineosporiaceae	6	0	83778
family	Adenoviridae	6	0	10508
family	Kofleriaceae	6	0	224464
family	Aerococcaceae	6	0	186827
family	Nitrosomonadaceae	6	0	206379
family	Methanobacteriaceae	6	0	2159
family	Bacteriovoracaceae	6	0	263369
family	Bdellovibrionaceae	6	0	213483
family	Phycisphaeraceae	6	0	666507
family	Conexibacteraceae	6	0	320583
family	Sphaerobacteraceae	6	0	85002
family	Pseudoalteromonadaceae	5	0	267888
family	Planococcaceae	5	0	186818
family	Hyphomonadaceae	5	0	69657
family	Chitinophagaceae	5	3	563835
family	Psychromonadaceae	5	0	267894
family	Nitrospiraceae	5	0	189779
family	Acidithiobacillaceae	5	0	225058
family	Anaerolineaceae	5	0	292628
family	Glycomycetaceae	4	0	85034
family	Spiroplasmataceae	4	0	2131
family	Beutenbergiaceae	4	0	125316
family	Caldilineaceae	4	0	475964
family	Dehalococcoidaceae	4	0	1202464
family	Gallionellaceae	4	0	90627
family	Desulfarculaceae	4	0	453228
family	Methylocystaceae	4	0	31993
family	Hydrogenophilaceae	4	0	206349
family	Idiomarinaceae	4	0	267893
family	Syntrophaceae	4	0	213468
family	Halanaerobiaceae	4	0	972
family	Chloroflexaceae	4	0	1106
family	Clostridiales Family XVII. Incertae Sedis	4	0	539000
family	Myoviridae	4	0	10662
family	Geobacteraceae	3	0	213422
family	Parvularculaceae	3	0	255474
family	Heliobacteriaceae	3	0	31984
family	Parachlamydiaceae	3	0	92713
family	Rivulariaceae	3	0	1185
family	Chlorobiaceae	2	0	191412
family	Anelloviridae	2	0	687329
family	Bartonellaceae	2	0	772
family	Picornaviridae	2	0	12058
family	Pelobacteraceae	2	0	213423
family	Francisellaceae	2	0	34064
family	Deferribacteraceae	2	0	191394
family	Leptospiraceae	2	0	170
family	Closteroviridae	2	0	69973
family	Elusimicrobiaceae	2	0	641876
family	Ascoviridae	2	0	43682
family	Melioribacteraceae	2	0	1334117
family	Acidobacteriaceae	2	0	204434
family	Pyrodictiaceae	2	0	2307
family	Papillomaviridae	2	0	151340
family	Thermoanaerobacterales Family IV. Incertae Sedis	2	0	543372
family	Halobacteroidaceae	2	0	53434
family	Desulfurobacteriaceae	1	1	558314
family	Candidatus Midichloriaceae	1	0	1328881
family	Hydrogenothermaceae	1	0	224027
family	Syntrophomonadaceae	1	0	68298
family	Acidimicrobiaceae	1	0	84994
family	Trueperaceae	1	0	332247
family	Methanosaetaceae	1	0	143067
family	Aquificaceae	1	0	64898
family	Thermoproteaceae	1	0	2267
family	Beijerinckiaceae	1	0	45404
family	Ferrimonadaceae	1	0	267892
family	Chlamydiaceae	1	0	809
family	Herpetosiphonaceae	1	0	189773
subfamily	Coronavirinae	2670	1	693995
subfamily	Paramyxovirinae	847	0	11159
subfamily	Chordopoxvirinae	452	0	10241
subfamily	Pneumovirinae	238	0	11244
subfamily	Alphaherpesvirinae	78	0	10293
subfamily	Azotobacter group	41	0	351
subfamily	Comovirinae	40	0	675075
subfamily	Autographivirinae	22	0	542835
subfamily	Betaherpesvirinae	14	0	10357
subfamily	Gammaherpesvirinae	4	0	10374
subfamily	Tevenvirinae	2	0	1198136
tribe	Rickettsieae	26	0	33988
tribe	Wolbachieae	1	0	952
genus	Achromobacter	786478	0	222
genus	Moraxella	238391	0	475
genus	Corynebacterium	41032	19337	1716
genus	Pseudomonas	34801	9421	286
genus	Microvirus	34618	23	10842
genus	Neisseria	30218	4901	482
genus	Haemophilus	22367	382	724
genus	Streptococcus	10758	6638	1301
genus	Acinetobacter	9910	4641	469
genus	Betabaculovirus	7266	0	558017
genus	Prevotella	5654	1888	838
genus	Delftia	4737	1485	80865
genus	Staphylococcus	4563	1911	1279
genus	Stenotrophomonas	4128	0	40323
genus	Propionibacterium	4112	59	1743
genus	Fusobacterium	3044	0	848
genus	Mycoplasma	2933	655	2093
genus	Agrobacterium	2826	325	357
genus	Rothia	2726	325	32207
genus	Alphacoronavirus	2652	0	693996
genus	Psychrobacter	2448	2429	497
genus	Lactobacillus	2251	1191	1578
genus	Porphyromonas	2063	205	836
genus	Serratia	1943	17	613
genus	Veillonella	1465	0	29465
genus	Escherichia	1379	51	561
genus	Tropheryma	1345	0	2038
genus	Actinobacillus	1056	613	713
genus	Methylobacterium	992	50	407
genus	Respirovirus	846	0	186938
genus	Tannerella	806	0	195950
genus	Rhizobium	794	47	379
genus	Enterococcus	710	613	1350
genus	Treponema	538	153	157
genus	Burkholderia	536	120	32008
genus	Exiguobacterium	501	11	33986
genus	Orthopoxvirus	452	237	10242
genus	Aggregatibacter	448	26	416916
genus	Methylovorus	398	398	81682
genus	Capnocytophaga	386	15	1016
genus	Bacillus	354	1	1386
genus	Finegoldia	347	0	150022
genus	Klebsiella	346	107	570
genus	Enterobacter	336	40	547
genus	Mycobacterium	333	82	1763
genus	Bacteroides	330	73	816
genus	Atopobium	296	0	1380
genus	Cupriavidus	264	14	106589
genus	Pseudogulbenkiania	231	0	568394
genus	Pneumovirus	219	0	11245
genus	Morganella	210	0	581
genus	Influenzavirus A	207	0	197911
genus	Tobamovirus	207	0	12234
genus	Ralstonia	205	10	48736
genus	Leuconostoc	201	37	1243
genus	Bradyrhizobium	190	57	374
genus	Janthinobacterium	190	0	29580
genus	Fibrella	180	0	861914
genus	Acidovorax	171	28	12916
genus	Leptotrichia	171	0	32067
genus	Anaerococcus	165	0	165779
genus	Streptobacillus	163	0	34104
genus	Parabacteroides	159	0	375288
genus	Alphabaculovirus	148	0	558016
genus	Clostridium	147	113	1485
genus	Proteus	145	0	583
genus	Streptomyces	143	40	1883
genus	Pandoraea	142	136	93217
genus	Campylobacter	136	36	194
genus	Vibrio	131	106	662
genus	Micrococcus	130	0	1269
genus	Bifidobacterium	126	47	1678
genus	Sphingomonas	124	13	13687
genus	Pectobacterium	115	85	122277
genus	Rhodococcus	112	10	1827
genus	Ichnovirus	103	0	10483
genus	Candidatus Saccharimonas	96	0	1331051
genus	Xanthomonas	93	33	338
genus	Alistipes	92	6	239759
genus	Pantoea	89	58	53335
genus	Sinorhizobium	88	10	28105
genus	Kribbella	83	0	182639
genus	Hahella	83	0	158481
genus	Salmonella	81	2	590
genus	Methylibium	81	0	316612
genus	Aeromonas	79	2	642
genus	Simplexvirus	76	0	10294
genus	Herminiimonas	74	0	303379
genus	Candidatus Azobacteroides	74	0	511434
genus	Ochrobactrum	73	0	528
genus	Jonesia	73	0	43673
genus	Selenomonas	72	2	970
genus	Taylorella	69	0	29574
genus	Buchnera	68	0	32199
genus	Rhodopseudomonas	66	0	1073
genus	Sphingobium	65	17	165695
genus	Mesorhizobium	63	29	68287
genus	Sulfolobus	62	0	2284
genus	Lactococcus	61	1	1357
genus	Providencia	60	0	586
genus	Filifactor	58	0	44259
genus	Gordonia	58	0	2053
genus	Potyvirus	53	0	12195
genus	Laribacter	48	0	168470
genus	Kytococcus	47	0	57499
genus	Histophilus	46	0	214906
genus	Novosphingobium	46	3	165696
genus	Sebaldella	44	0	32068
genus	Magnetococcus	42	0	162171
genus	Nocardioides	42	0	1839
genus	Mannheimia	41	0	75984
genus	Azotobacter	41	0	352
genus	Comovirus	40	0	12258
genus	Candidatus Blochmannia	40	38	203804
genus	Paenibacillus	39	6	44249
genus	Methanococcus	39	2	2184
genus	Brevundimonas	38	0	41275
genus	Sphingopyxis	38	0	165697
genus	Deinococcus	36	1	1298
genus	Variovorax	36	0	34072
genus	Erwinia	35	7	551
genus	Aminobacterium	34	0	81466
genus	Leptothrix	34	0	88
genus	Sphaerochaeta	34	2	399320
genus	Candidatus Liberibacter	33	5	34019
genus	Shimwellia	31	0	1335483
genus	Arthrobacter	30	3	1663
genus	Shewanella	30	10	22
genus	Tetragenococcus	30	0	51668
genus	Saccharopolyspora	30	0	1835
genus	Chromohalobacter	30	0	42054
genus	Yersinia	29	5	629
genus	Xanthobacter	29	0	279
genus	Polaromonas	28	11	52972
genus	Flavobacterium	28	0	237
genus	Listeria	28	4	1637
genus	Azospirillum	27	2	191
genus	Mobiluncus	27	0	2050
genus	Polymorphum	27	0	991903
genus	Eubacterium	27	1	1730
genus	Bibersteinia	27	0	476528
genus	Cryptobacterium	27	0	84162
genus	Intrasporangium	26	0	53357
genus	Sanguibacter	26	0	60919
genus	Nitrobacter	26	5	911
genus	Pasteurella	25	0	745
genus	Bordetella	25	11	517
genus	Phenylobacterium	25	0	20
genus	Verminephrobacter	25	0	364316
genus	Megasphaera	25	0	906
genus	Marivirga	25	0	869806
genus	Raoultella	24	0	160674
genus	Thermanaerovibrio	24	0	81461
genus	Wolinella	23	0	843
genus	Gardnerella	23	0	2701
genus	Legionella	23	5	445
genus	Microbacterium	23	0	33882
genus	Rubrivivax	22	0	28067
genus	Ictalurivirus	22	0	172653
genus	Azospira	22	0	146937
genus	Amycolicicoccus	21	0	992401
genus	Alicycliphilus	21	0	201096
genus	Collimonas	21	0	202907
genus	Salinispora	21	14	168694
genus	Herbaspirillum	20	0	963
genus	Cellulomonas	20	9	1707
genus	Pseudoxanthomonas	20	2	83618
genus	Citrobacter	20	0	544
genus	Carnobacterium	20	3	2747
genus	Metapneumovirus	19	0	162387
genus	T7likevirus	19	0	110456
genus	Chroococcidiopsis	19	0	54298
genus	Dichelobacter	19	0	869
genus	Ilyobacter	19	0	167639
genus	Rickettsia	19	0	780
genus	Basfia	19	0	697331
genus	Alcanivorax	18	15	59753
genus	Actinoplanes	18	1	1865
genus	Nocardiopsis	18	3	2013
genus	Chelativorans	18	0	449972
genus	Comamonas	18	0	283
genus	Candidatus Riesia	18	0	401618
genus	Lawsonia	18	0	41707
genus	Segniliparus	17	0	286801
genus	Clavibacter	17	0	1573
genus	Betacoronavirus	17	0	694002
genus	Helicobacter	17	0	209
genus	Oscillibacter	17	0	459786
genus	Amycolatopsis	17	0	1813
genus	Crinalium	17	0	241421
genus	Thermodesulfobium	17	0	227388
genus	Candidatus Portiera	17	0	235572
genus	Synechococcus	17	11	1129
genus	Spirochaeta	17	0	146
genus	Desulfovibrio	17	2	872
genus	Oscillatoria	16	10	1158
genus	Photorhabdus	16	7	29487
genus	Candidatus Atelocyanobacterium	16	0	1453359
genus	Frankia	16	4	1854
genus	Olsenella	16	0	133925
genus	Thioalkalivibrio	16	0	106633
genus	Candidatus Carsonella	16	0	114185
genus	Nocardia	16	3	1817
genus	Erythrobacter	16	0	1041
genus	Thermus	16	0	270
genus	Brachybacterium	15	0	43668
genus	Borrelia	15	0	138
genus	Xenorhabdus	15	0	626
genus	Starkeya	15	0	152053
genus	Geobacillus	15	1	129337
genus	Butyrivibrio	15	0	830
genus	Kocuria	15	0	57493
genus	Thermobispora	14	0	147067
genus	Geodermatophilus	14	0	1860
genus	Rahnella	13	9	34037
genus	Ramlibacter	13	0	174951
genus	Cronobacter	13	1	413496
genus	Thauera	13	0	33057
genus	Marinobacter	13	2	2742
genus	Sorangium	13	0	39643
genus	Marinomonas	13	10	28253
genus	Thermoanaerobacter	13	0	1754
genus	Candidatus Phytoplasma	13	7	33926
genus	Rhodobacter	13	0	1060
genus	Riemerella	12	0	34084
genus	Anabaena	12	0	1163
genus	Hyphomicrobium	12	0	81
genus	Brucella	12	12	234
genus	Blattabacterium	11	2	34098
genus	Influenzavirus B	11	0	197912
genus	Caulobacter	11	0	75
genus	Azorhizobium	11	0	6
genus	Ruminococcus	11	0	1263
genus	Blastococcus	11	0	38501
genus	Dictyoglomus	11	11	13
genus	Shigella	11	0	620
genus	Nakamurella	11	0	53460
genus	Wigglesworthia	11	0	51228
genus	Phaeovirus	11	0	181085
genus	Pelagibacterium	10	0	1082930
genus	Lambdalikevirus	10	0	186765
genus	Bracovirus	10	0	10485
genus	Tistrella	10	0	171436
genus	Faecalibacterium	10	0	216851
genus	Acidothermus	10	0	28048
genus	Streptosporangium	10	0	2000
genus	Rubrobacter	10	0	42255
genus	Dickeya	10	1	204037
genus	Paracoccus	10	0	265
genus	Candidatus Tremblaya	10	0	189384
genus	Desulfurispirillum	9	0	393029
genus	Solitalea	9	0	929509
genus	Acidaminococcus	9	3	904
genus	Gallibacterium	9	0	155493
genus	Thermosediminibacter	9	0	291988
genus	Oceanimonas	9	0	129577
genus	Phaeobacter	9	0	302485
genus	Halomonas	9	0	2745
genus	Oligotropha	9	0	40136
genus	Catenulispora	9	0	414878
genus	Blautia	8	0	572511
genus	Tsukamurella	8	0	2060
genus	Corallococcus	8	0	83461
genus	Muromegalovirus	8	0	10365
genus	Rhodomicrobium	8	0	1068
genus	Rhodospirillum	8	0	1081
genus	Coxiella	8	0	776
genus	Orientia	7	0	69474
genus	Candidatus Sulcia	7	0	336809
genus	Opitutus	7	0	178440
genus	Megamonas	7	0	158846
genus	Parvibaculum	7	0	256616
genus	Erysipelothrix	7	0	1647
genus	Saccharomonospora	7	0	1851
genus	Ranavirus	7	0	10492
genus	Thiomicrospira	7	0	933
genus	Arcanobacterium	7	0	28263
genus	Candidatus Hamiltonella	7	0	568987
genus	Alteromonas	7	0	226
genus	Saprospira	7	0	1007
genus	Methylotenera	7	2	359407
genus	Belliella	7	0	232244
genus	Nautilia	7	0	191291
genus	Cellvibrio	7	0	10
genus	Gluconacetobacter	7	0	89583
genus	Alicyclobacillus	7	0	29330
genus	Sphaerobacter	6	0	2056
genus	Kineococcus	6	0	33981
genus	Methanobrevibacter	6	0	2172
genus	Modestobacter	6	0	88138
genus	Roseobacter	6	4	2433
genus	Chromobacterium	6	0	535
genus	Candidatus Cardinium	6	0	273135
genus	Aerococcus	6	0	1375
genus	Fretibacterium	6	0	1434006
genus	Nitrosomonas	6	1	914
genus	Bacteriovorax	6	0	146784
genus	Desulfotomaculum	6	0	1562
genus	Coccolithovirus	6	0	346673
genus	Isoptericola	6	0	254250
genus	Thiomonas	6	5	32012
genus	Geitlerinema	6	0	63132
genus	Azoarcus	6	0	12960
genus	Haliangium	6	0	162027
genus	Neorickettsia	6	6	33993
genus	Tolumonas	6	0	43947
genus	Leifsonia	6	0	110932
genus	Edwardsiella	6	2	635
genus	Salinarchaeum	6	0	1269201
genus	Phycisphaera	6	0	666508
genus	Spirosoma	6	0	107
genus	Conexibacter	6	0	191494
genus	Bdellovibrio	6	1	958
genus	Brachyspira	6	1	29521
genus	Mastadenovirus	6	0	10509
genus	Anaerolinea	5	0	233189
genus	Leptospirillum	5	5	179
genus	Methylomicrobium	5	0	39773
genus	Thermoanaerobacterium	5	0	28895
genus	Anaeromyxobacter	5	0	161492
genus	Candidatus Symbiobacter	5	0	1436289
genus	Macrococcus	5	0	69965
genus	Pseudoalteromonas	5	0	53246
genus	Thermodesulfobacterium	5	0	1740
genus	Solibacillus	5	0	648800
genus	Psychromonas	5	0	67572
genus	Caldicellulosiruptor	5	1	44000
genus	Spiribacter	5	0	1335745
genus	Methylophaga	5	5	40222
genus	Polynucleobacter	5	0	44013
genus	Natrialba	5	0	63742
genus	Candidatus Hodgkinia	5	0	573657
genus	Halorhodospira	5	0	85108
genus	Acidithiobacillus	5	1	119977
genus	Stackebrandtia	4	0	283810
genus	Desulfarculus	4	0	453229
genus	Glaciecola	4	0	89404
genus	Pseudonocardia	4	0	1847
genus	Thiobacillus	4	0	919
genus	Methylocystis	4	0	133
genus	Ehrlichia	4	0	943
genus	Fervidobacterium	4	0	2422
genus	Roseburia	4	0	841
genus	Thermodesulfatator	4	0	241192
genus	Paludibacter	4	0	346096
genus	Saccharophagus	4	0	316625
genus	Halorhabdus	4	0	146825
genus	Isosphaera	4	0	127
genus	Ketogulonicigenium	4	0	92944
genus	Sphingobacterium	4	0	28453
genus	Photobacterium	4	0	657
genus	Spiroplasma	4	3	2132
genus	Halanaerobium	4	0	2330
genus	Caldilinea	4	0	233191
genus	Beutenbergia	4	0	84756
genus	Methylococcus	4	0	413
genus	Runella	4	0	105
genus	Xylella	4	0	2370
genus	Saccharothrix	4	0	2071
genus	Idiomarina	4	0	135575
genus	Dehalococcoides	4	0	61434
genus	Caldanaerobacter	3	0	249529
genus	Parachlamydia	3	0	83551
genus	Calothrix	3	0	1186
genus	Alkalilimnicola	3	0	133193
genus	Myxococcus	3	0	32
genus	Parvularcula	3	0	208215
genus	Halothece	3	0	76023
genus	Magnetospirillum	3	0	13134
genus	Candidatus Accumulibacter	3	0	327159
genus	Sulfobacillus	3	0	28033
genus	Actinosynnema	3	0	40566
genus	Meiothermus	3	0	65551
genus	Heliobacterium	3	0	2697
genus	Cytomegalovirus	3	0	10358
genus	Cytophaga	3	0	978
genus	Pseudovibrio	3	0	258255
genus	Syntrophus	3	0	43773
genus	Thermosynechococcus	3	3	146785
genus	Thalassolituus	3	0	187492
genus	Natronococcus	3	0	29287
genus	Gluconobacter	3	0	441
genus	Zymomonas	3	0	541
genus	Gallionella	3	0	96
genus	Kinetoplastibacterium	3	1	33055
genus	Geobacter	3	0	28231
genus	Hyphomonas	3	0	85
genus	Dechloromonas	3	0	73029
genus	Methanolobus	3	0	2220
genus	Rhodanobacter	3	0	75309
genus	Asticcacaulis	3	0	76890
genus	Phikmvlikevirus	3	0	477967
genus	Desulfobulbus	3	0	893
genus	Halovivax	3	0	332951
genus	Xylanimonas	3	0	186188
genus	Psychroflexus	3	0	83612
genus	Microlunatus	3	0	29404
genus	Kangiella	2	0	261963
genus	Candidatus Zinderia	2	0	884214
genus	Chloroflexus	2	2	1107
genus	Frateuria	2	0	70411
genus	Melioribacter	2	0	1134403
genus	Francisella	2	1	262
genus	Ascovirus	2	0	43680
genus	Thiocystis	2	0	13724
genus	Elusimicrobium	2	0	423604
genus	Pedobacter	2	0	84567
genus	Teredinibacter	2	0	2425
genus	Acidiphilium	2	2	522
genus	Thermobifida	2	0	83677
genus	Varicellovirus	2	0	10319
genus	Desulfococcus	2	0	896
genus	Roseiflexus	2	2	120961
genus	Granulibacter	2	0	364409
genus	Methylobacillus	2	0	404
genus	Desulfotalea	2	0	109168
genus	Aromatoleum	2	0	551759
genus	Sodalis	2	0	84565
genus	Leisingera	2	0	191028
genus	Zobellia	2	0	112040
genus	Enterovirus	2	0	12059
genus	Pyrolobus	2	0	54251
genus	Mahella	2	0	252965
genus	Kitasatospora	2	0	2063
genus	Anoxybacillus	2	0	150247
genus	Crinivirus	2	0	67753
genus	Haloferax	2	0	2251
genus	Candidatus Arthromitus	2	2	49082
genus	Methanomethylovorans	2	0	101191
genus	Trichodesmium	2	0	1205
genus	Lymphocryptovirus	2	0	10375
genus	Verrucosispora	2	0	84593
genus	Marinithermus	2	0	186191
genus	Bartonella	2	2	773
genus	Alphatorquevirus	2	0	687331
genus	Alphapapillomavirus	2	0	333750
genus	Pelobacter	2	0	18
genus	Dinoroseobacter	2	0	309512
genus	Acetohalobium	2	0	28186
genus	Microcystis	2	0	1125
genus	Advenella	2	0	290425
genus	Methanosarcina	2	0	2207
genus	T4likevirus	2	0	10663
genus	Niastella	2	0	354354
genus	Dyadobacter	2	0	120831
genus	Leptospira	2	0	171
genus	Candidatus Puniceispirillum	1	0	767891
genus	Pyrobaculum	1	0	2276
genus	Methylomonas	1	0	416
genus	Sideroxydans	1	0	314343
genus	Pirellula	1	0	123
genus	Simiduia	1	0	447467
genus	Rubulavirus	1	0	39744
genus	Acidobacterium	1	0	33973
genus	Desulfosporosinus	1	1	79206
genus	Candidatus Pelagibacter	1	0	198251
genus	Nostoc	1	0	1177
genus	Cyanobium	1	0	167375
genus	Thermobaculum	1	0	262406
genus	Maricaulis	1	0	74317
genus	Allochromatium	1	0	85072
genus	Singulisphaera	1	0	466152
genus	Terriglobus	1	1	392733
genus	Ferrimonas	1	0	44011
genus	Rhodopirellula	1	0	265488
genus	Percavirus	1	0	548688
genus	Sulfuricurvum	1	1	286130
genus	Anaerobaculum	1	0	46613
genus	Carboxydothermus	1	0	129957
genus	Syntrophothermus	1	0	129001
genus	Weissella	1	0	46255
genus	Candidatus Desulforudis	1	0	471826
genus	Planctomyces	1	1	118
genus	Cellulosilyticum	1	0	698776
genus	Oenococcus	1	0	46254
genus	Coriobacterium	1	0	33870
genus	Roseolovirus	1	0	40272
genus	Sulfurihydrogenibium	1	0	212790
genus	Thermaerobacter	1	0	73918
genus	Chlorobium	1	0	1091
genus	Herpetosiphon	1	0	64
genus	Desulfomonile	1	0	2357
genus	Acidimicrobium	1	0	53634
genus	Chamaesiphon	1	0	217161
genus	Natronomonas	1	0	63743
genus	Cyanobacterium	1	1	102234
genus	Ureaplasma	1	0	2129
genus	Pleurocapsa	1	0	44474
genus	Flexistipes	1	0	2351
genus	Amphibacillus	1	0	29331
genus	Calditerrivibrio	1	0	545865
genus	Desulfobacula	1	0	28222
genus	Coprococcus	1	0	33042
genus	Methanosaeta	1	0	2222
genus	Pelodictyon	1	0	1099
genus	Truepera	1	0	332248
genus	Chlamydia	1	0	810
genus	Candidatus Midichloria	1	0	411566
genus	Thermacetogenium	1	0	140458
genus	Nitrosococcus	1	1	1227
genus	Candidatus Nasuia	1	0	1301080
genus	Candidatus Endolissoclinum	1	0	1263978
genus	Weeksella	1	0	1013
genus	Macavirus	1	0	548687
genus	Wolbachia	1	0	953
genus	Candidatus Moranella	1	0	1048757
genus	Desulfitobacterium	1	0	36853
genus	Methylocella	1	0	120652
genus	Hirschia	1	0	2723
genus	Aquifex	1	0	2713
genus	Thioflavicoccus	1	0	156885
subgenus	Branhamella	238391	0	46226
species group	Pseudomonas fluorescens group	11994	1517	136843
species group	Pseudomonas aeruginosa group	5201	291	136841
species group	Acinetobacter calcoaceticus/baumannii complex	5195	137	909768
species group	Pseudomonas putida group	1180	213	136845
species group	Agrobacterium tumefaciens complex	764	2	1183400
species group	Methylobacterium extorquens group	675	0	578822
species group	Pseudomonas syringae group	515	70	136849
species group	Pseudomonas stutzeri group	330	0	136846
species group	Bacillus cereus group	324	2	86661
species group	Enterobacter cloacae complex	277	18	354276
species group	pseudomallei group	245	3	111527
species group	Streptococcus anginosus group	153	11	671232
species group	Mycobacterium chelonae group	150	0	670516
species group	Pseudomonas pertucinogena group	130	0	136844
species group	Burkholderia cepacia complex	98	21	87882
species group	spotted fever group	19	0	114277
species group	Streptococcus dysgalactiae group	17	0	119603
species group	Lactobacillus casei group	15	11	655183
species group	Bacillus subtilis group	11	0	653685
species group	Mycobacterium tuberculosis complex	11	8	77643
species group	Borrelia burgdorferi group	9	0	64895
species group	Vibrio harveyi group	7	0	717610
species group	16SrX (Apple proliferation group)	5	0	85630
species group	Mycobacterium avium complex (MAC)	5	0	120793
species group	canis group	4	1	106178
species group	Mycoplasma mycoides group	2	0	656088
species group	Candidatus Phytoplasma asteris	1	1	85620
species subgroup	Pseudomonas stutzeri subgroup	330	0	578833
species subgroup	Pseudomonas syringae group genomosp. 1	178	0	251695
species subgroup	Mycobacterium abscessus subgroup	150	0	670506
species subgroup	Pseudomonas syringae group genomosp. 2	119	0	251698
species subgroup	Streptomyces griseus group	3	0	629295
species	Achromobacter xylosoxidans	786478	320	85698
species	Moraxella catarrhalis	238391	0	480
species	Enterobacteria phage phiX174 sensu lato	34592	34592	374840
species	Corynebacterium aurimucosum	19337	0	169292
species	Haemophilus influenzae	19128	18038	727
species	Neisseria gonorrhoeae	16841	42	485
species	Pseudomonas fluorescens	8013	951	294
species	Neisseria meningitidis	7883	6656	487
species	Choristoneura occidentalis granulovirus	7266	7266	364745
species	Pseudomonas sp. TKP	4602	4602	1415630
species	Acinetobacter baumannii	4420	4259	470
species	Stenotrophomonas maltophilia	4128	1791	40324
species	Propionibacterium acnes	3936	3669	1747
species	Delftia acidovorans	3096	0	80866
species	Fusobacterium nucleatum	3044	1607	851
species	Human coronavirus NL63	2652	2652	277944
species	Pseudomonas aeruginosa	2539	2355	287
species	Prevotella melaninogenica	2402	0	28132
species	Pseudomonas mendocina	2217	292	300
species	Streptococcus parasanguinis	2114	1888	1318
species	Staphylococcus aureus	2103	1985	1280
species	Haemophilus parainfluenzae	2087	0	729
species	Rothia mucilaginosa	2005	0	43675
species	Serratia marcescens	1887	304	615
species	Agrobacterium sp. H13-3	1709	1709	861208
species	Mycoplasma hyopneumoniae	1591	25	2099
species	Pseudomonas poae	1484	0	200451
species	Veillonella parvula	1465	0	29466
species	Tropheryma whipplei	1345	1012	2039
species	Escherichia coli	1328	1117	562
species	Corynebacterium callunae	1174	0	1721
species	Pseudomonas protegens	980	708	380021
species	Porphyromonas asaccharolytica	961	0	28123
species	Porphyromonas gingivalis	897	878	837
species	Pseudomonas sp. UW4	838	838	1207075
species	Human parainfluenza virus 3	838	838	11216
species	Pseudomonas putida	808	282	303
species	Tannerella forsythia	806	0	28112
species	Haemophilus parasuis	763	756	738
species	Agrobacterium fabrum	747	0	1176649
species	Methylobacterium extorquens	675	270	408
species	Acinetobacter calcoaceticus	638	0	471
species	Rhizobium sp. IRBG74	615	615	424182
species	Neisseria lactamica	593	0	486
species	Lactobacillus rhamnosus	510	477	47715
species	Staphylococcus epidermidis	462	374	1282
species	Mycoplasma arthritidis	412	0	2111
species	Prevotella denticola	402	0	28129
species	Rothia dentocariosa	396	0	2047
species	Exiguobacterium sp. MH3	391	391	1399115
species	Aggregatibacter aphrophilus	382	0	732
species	Prevotella sp. oral taxon 299	363	0	652716
species	Capnocytophaga ochracea	351	0	1018
species	Finegoldia magna	347	0	1260
species	Actinobacillus pleuropneumoniae	337	330	715
species	Pseudomonas stutzeri	330	94	316
species	Corynebacterium resistens	326	0	258224
species	Bacillus thuringiensis	311	0	1428
species	Atopobium parvulum	296	0	1382
species	Streptococcus salivarius	289	212	1304
species	Prevotella intermedia	280	0	28131
species	Corynebacterium argentoratense	268	0	42817
species	Pseudomonas brassicacearum	267	0	930166
species	Streptococcus suis	247	3	1307
species	Burkholderia mallei	234	210	13373
species	Pseudogulbenkiania sp. NH8B	231	231	748280
species	Enterobacter cloacae	227	68	550
species	Prevotella ruminicola	224	0	839
species	Respiratory syncytial virus	219	219	12814
species	Cupriavidus metallidurans	219	0	119219
species	Klebsiella pneumoniae	216	185	573
species	Morganella morganii	210	0	582
species	Influenza A virus	207	6	11320
species	Cucumber green mottle mosaic virus	207	207	12235
species	Streptococcus thermophilus	206	186	1308
species	Vaccinia virus	202	202	10245
species	Streptococcus mitis	198	0	28037
species	Bacteroides vulgatus	194	0	821
species	Janthinobacterium sp. Marseille	190	190	375286
species	Mycoplasma hominis	190	0	2098
species	Lactobacillus gasseri	186	0	1596
species	Streptococcus pyogenes	184	159	1314
species	Corynebacterium urealyticum	183	171	43771
species	Fibrella aestuarina	180	0	651143
species	Ralstonia pickettii	180	49	329
species	Pseudomonas syringae	178	0	317
species	Leptotrichia buccalis	171	0	40542
species	Pseudomonas entomophila	169	0	312306
species	Anaerococcus prevotii	165	0	33034
species	Streptobacillus moniliformis	163	0	34105
species	Parabacteroides distasonis	159	0	823
species	Streptococcus pneumoniae	158	139	1313
species	Delftia sp. Cs1-4	156	156	742013
species	Corynebacterium halotolerans	154	0	225326
species	Pseudomonas sp. VLB120	154	154	69328
species	Pseudomonas resinovorans	154	0	53412
species	Mycobacterium abscessus	150	125	36809
species	Pseudomonas syringae group genomosp. 3	148	0	251701
species	Streptococcus sanguinis	146	0	1305
species	Treponema brennaborense	146	0	81028
species	Proteus mirabilis	145	125	584
species	Methylobacterium radiotolerans	142	0	31998
species	Maruca vitrata nucleopolyhedrovirus	142	142	1307954
species	Pseudomonas fulva	140	0	47880
species	Pseudomonas denitrificans	130	0	43306
species	Micrococcus luteus	130	0	1270
species	Leuconostoc gelidum	121	0	1244
species	Lactobacillus fermentum	121	121	1613
species	Pseudomonas savastanoi	119	0	29438
species	Treponema denticola	106	0	158
species	Enterobacteriaceae bacterium strain FGI 57	102	102	693444
species	Treponema pedis	101	0	409322
species	Actinobacillus succinogenes	99	0	67854
species	Candidatus Saccharimonas aalborgensis	96	96	1332188
species	Prevotella dentalis	95	0	52227
species	Streptococcus oralis	92	0	1303
species	Exiguobacterium sp. AT1b	92	92	360911
species	Lactobacillus reuteri	92	85	1598
species	Enterococcus faecalis	86	23	1351
species	Kribbella flavida	83	0	182640
species	Hahella chejuensis	83	0	158327
species	Candidatus Saccharibacteria bacterium RAAC3_TM7_1	82	82	1394711
species	Methylibium petroleiphilum	81	0	105560
species	Alistipes finegoldii	77	0	214856
species	Salmonella enterica	75	2	28901
species	Candidatus Azobacteroides pseudotrichonymphae	74	0	511435
species	Herminiimonas arsenicoxydans	74	74	204773
species	Methylobacterium populi	73	0	223967
species	Ochrobactrum anthropi	73	0	529
species	Jonesia denitrificans	73	0	43674
species	Rhodococcus erythropolis	69	42	1833
species	Sphingomonas sp. MM-1	69	69	745310
species	Taylorella equigenitalis	69	64	29575
species	Aeromonas hydrophila	68	8	644
species	Buchnera aphidicola	68	5	9
species	Rhodopseudomonas palustris	66	25	1076
species	Acidovorax sp. KKS102	66	66	358220
species	Hyposoter fugitivus ichnovirus	65	65	265522
species	Streptococcus agalactiae	64	48	1311
species	Sulfolobus islandicus	61	0	43080
species	Acinetobacter oleivorans	61	0	1148157
species	Providencia stuartii	60	0	588
species	Streptococcus anginosus	60	45	1328
species	Lactococcus lactis	59	6	1358
species	Rhizobium leguminosarum	59	5	384
species	Sinorhizobium fredii	59	12	380
species	Corynebacterium kroppenstedtii	58	0	161879
species	Streptococcus pseudopneumoniae	58	0	257758
species	Filifactor alocis	58	0	143361
species	Streptococcus sp. I-P16	57	57	1156433
species	Human herpesvirus 1	57	57	10298
species	Corynebacterium diphtheriae	57	25	1717
species	Campylobacter concisus	53	0	199
species	Rhizobium etli	50	16	29449
species	Selenomonas sputigena	49	0	69823
species	Laribacter hongkongensis	48	0	168471
species	Streptococcus constellatus	48	0	76860
species	Kytococcus sedentarius	47	0	1276
species	Propionibacterium avidum	46	0	33010
species	Histophilus somni	46	18	731
species	Streptococcus mutans	44	41	1309
species	Sebaldella termitidis	44	0	826
species	Nocardioides sp. JS614	42	42	196162
species	Sphingomonas wittichii	42	0	160791
species	Magnetococcus marinus	42	0	1124597
species	Streptococcus oligofermentans	42	0	195041
species	Azotobacter vinelandii	41	41	354
species	Mannheimia haemolytica	41	35	75985
species	Watermelon mosaic virus	40	40	146500
species	Squash mosaic virus	40	40	12263
species	Aggregatibacter actinomycetemcomitans	40	34	714
species	Acidovorax sp. JS42	40	40	232721
species	Bacteroides fragilis	39	29	817
species	Gordonia bronchialis	39	0	2054
species	Mycobacterium smegmatis	39	0	1772
species	Brevundimonas subvibrioides	38	0	74313
species	Sphingopyxis alaskensis	38	0	117207
species	Bifidobacterium longum	38	34	216816
species	Mycoplasma hyorhinis	38	19	2100
species	Glypta fumiferanae ichnovirus	37	37	419435
species	Variovorax paradoxus	36	15	34073
species	Staphylococcus haemolyticus	36	0	1283
species	Streptococcus gordonii	35	0	1302
species	Aminobacterium colombiense	34	0	81468
species	Leptothrix cholodnii	34	0	34029
species	Streptococcus intermedius	34	25	1338
species	Xanthomonas campestris	33	12	339
species	Corynebacterium maris	33	0	575200
species	Methylobacterium sp. 4-46	32	32	426117
species	Shimwellia blattae	31	0	563
species	Corynebacterium jeikeium	31	0	38289
species	Bradyrhizobium sp. BTAi1	31	31	288000
species	Streptomyces coelicolor	31	0	1902
species	Burkholderia cenocepacia	30	13	95486
species	Tetragenococcus halophilus	30	0	51669
species	Chromohalobacter salexigens	30	0	158080
species	Saccharopolyspora erythraea	30	0	1836
species	Bradyrhizobium sp. S23321	29	29	335659
species	Xanthobacter autotrophicus	29	0	280
species	Treponema succinifaciens	28	0	167
species	Paenibacillus mucilaginosus	28	2	61624
species	Agrobacterium vitis	28	0	373
species	Methanococcus vannielii	27	0	2187
species	Polymorphum gilvum	27	0	991904
species	Propionibacterium freudenreichii	27	0	1744
species	Deinococcus geothermalis	27	0	68909
species	Cryptobacterium curtum	27	0	84163
species	Mobiluncus curtisii	27	0	2051
species	[Clostridium] difficile	27	15	1496
species	Bibersteinia trehalosi	27	0	47735
species	Intrasporangium calvum	26	0	53358
species	Sanguibacter keddieii	26	0	60920
species	Acidovorax ebreus	25	0	721785
species	Candidatus Liberibacter asiaticus	25	0	34021
species	Phenylobacterium zucineum	25	0	284016
species	Megasphaera elsdenii	25	0	907
species	Pasteurella multocida	25	12	747
species	Verminephrobacter eiseniae	25	0	364317
species	Marivirga tractuosa	25	0	1006
species	Oryctes rhinoceros virus	25	25	92521
species	Propionibacterium acidipropionici	24	0	1748
species	Thermanaerovibrio acidaminovorans	24	0	81462
species	Listeria monocytogenes	24	24	1639
species	Raoultella ornithinolytica	24	0	54291
species	Campylobacter jejuni	24	0	197
species	Novosphingobium sp. PP1Y	23	23	702113
species	Lactobacillus buchneri	23	22	1581
species	Rhizobium tropici	23	0	398
species	Gardnerella vaginalis	23	10	2702
species	Wolinella succinogenes	23	0	844
species	Microbacterium testaceum	23	0	2033
species	Rubrivivax gelatinosus	22	0	28068
species	Azospira oryzae	22	0	146939
species	Ictalurid herpesvirus 1	22	22	10401
species	Pectobacterium carotovorum	22	0	554
species	Lactobacillus salivarius	22	22	1624
species	Enterobacter asburiae	22	0	61645
species	Staphylococcus warneri	22	0	1292
species	Selenomonas ruminantium	21	0	971
species	Burkholderia lata	21	21	482957
species	Collimonas fungivorans	21	0	158899
species	Alicycliphilus denitrificans	21	8	179636
species	Amycolicicoccus subflavus	21	0	639313
species	Capnocytophaga canimorsus	20	0	28188
species	Cupriavidus necator	20	8	106590
species	Candidatus Baumannia cicadellinicola	20	0	186490
species	Bradyrhizobium diazoefficiens	20	0	1355477
species	Corynebacterium glutamicum	20	10	1718
species	Propionibacterium propionicum	20	0	1750
species	Novosphingobium aromaticivorans	20	0	48935
species	Methylobacterium nodulans	20	0	114616
species	Herbaspirillum seropedicae	20	0	964
species	Mannheimia succiniciproducens	19	0	157673
species	Psychrobacter sp. PRwf-1	19	19	349106
species	Ilyobacter polytropus	19	0	167642
species	Klebsiella oxytoca	19	11	571
species	Lactobacillus helveticus	19	10	1587
species	Bradyrhizobium japonicum	19	0	375
species	Dichelobacter nodosus	19	0	870
species	Pseudomonas monteilii	19	19	76759
species	Human metapneumovirus	19	19	162145
species	Corynebacterium efficiens	19	0	152794
species	Chroococcidiopsis thermalis	19	0	54299
species	Yersinia phage phiA1122	19	19	227720
species	Sphingobium chlorophenolicum	18	0	46429
species	Lawsonia intracellularis	18	1	29546
species	Candidatus Riesia pediculicola	18	0	401619
species	Chelativorans sp. BNC1	18	18	266779
species	Comamonas testosteroni	18	0	285
species	Bradyrhizobium oligotrophicum	17	0	44255
species	Spirochaeta thermophila	17	17	154
species	Cercopithecine herpesvirus 2	17	17	10317
species	Bradyrhizobium sp. ORS 278	17	17	114615
species	Carnobacterium maltaromaticum	17	0	2751
species	Betacoronavirus 1	17	0	694003
species	Mesorhizobium ciceri	17	0	39645
species	Oscillibacter valericigenes	17	0	351091
species	Xanthomonas euvesicatoria	17	0	456327
species	Crinalium epipsammum	17	0	241425
species	Thermodesulfobium narugense	17	0	184064
species	Flavobacterium indicum	17	0	312277
species	Segniliparus rotundus	17	0	286802
species	Lactobacillus crispatus	17	0	47770
species	Clavibacter michiganensis	17	8	28447
species	Flavobacteriaceae bacterium 3519-10	17	17	531844
species	Candidatus Portiera aleyrodidarum	17	13	91844
species	Arthrobacter arilaitensis	16	0	256701
species	Bacteroides helcogenes	16	0	290053
species	Olsenella uli	16	0	133926
species	Candidatus Carsonella ruddii	16	4	114186
species	Erythrobacter litoralis	16	0	39960
species	Candidatus Atelocyanobacterium thalassa	16	16	713887
species	Kocuria rhizophila	15	0	72000
species	Starkeya novella	15	0	921
species	Brachybacterium faecium	15	0	43669
species	Agrobacterium tumefaciens	15	0	358
species	Ralstonia solanacearum	15	10	305
species	Sphingobium sp. SYK-6	15	15	627192
species	Sphingobium japonicum	15	0	332056
species	Burkholderia gladioli	15	0	28095
species	Butyrivibrio proteoclasticus	15	0	43305
species	Corynebacterium variabile	15	0	1727
species	Burkholderia phytofirmans	15	0	261302
species	Pantoea vagans	15	0	470934
species	Bacillus infantis	14	0	324767
species	Azospirillum lipoferum	14	0	193
species	Serratia sp. AS13	14	14	768493
species	Lactobacillus acidophilus	14	12	1579
species	Geodermatophilus obscurus	14	0	1861
species	Thermobispora bispora	14	0	2006
species	Staphylococcus pasteuri	14	0	45972
species	Thioalkalivibrio sulfidophilus	14	0	1033854
species	Sorangium cellulosum	13	1	56
species	Thauera sp. MZ1T	13	13	85643
species	Ramlibacter tataouinensis	13	0	94132
species	Acinetobacter sp. ADP1	13	13	62977
species	Papaya ringspot virus	13	13	12205
species	Burkholderia ambifaria	13	3	152480
species	Erwinia billingiae	13	0	182337
species	Lactobacillus sanfranciscensis	13	0	1625
species	Clostridium perfringens	13	11	1502
species	Propionibacterium phage PA6	13	13	376758
species	Enterobacter aerogenes	13	11	548
species	Rhodococcus opacus	13	0	37919
species	Sphaerochaeta globosa	13	0	1131703
species	Nocardiopsis alba	12	0	53437
species	Rhodobacter sphaeroides	12	5	1063
species	Burkholderia sp. YI23	12	12	1097668
species	Streptomyces albus	12	0	1888
species	Streptococcus equi	12	1	1336
species	Xenorhabdus nematophila	12	0	628
species	Riemerella anatipestifer	12	9	34085
species	Legionella pneumophila	12	6	446
species	Amycolatopsis orientalis	12	0	31958
species	Yersinia enterocolitica	12	1	630
species	Anabaena sp. 90	12	12	46234
species	Staphylococcus saprophyticus	12	0	29385
species	Nitrobacter hamburgensis	12	0	912
species	Streptomyces cattleya	12	0	29303
species	Cronobacter sakazakii	12	2	28141
species	Gordonia polyisoprenivorans	11	0	84595
species	Polaromonas naphthalenivorans	11	0	216465
species	Mycobacterium vanbaalenii	11	0	110539
species	Nakamurella multipartita	11	0	53461
species	Sinorhizobium medicae	11	0	110321
species	Bacillus cereus	11	4	1396
species	Eubacterium siraeum	11	9	39492
species	Wigglesworthia glossinidia	11	2	51229
species	Bordetella petrii	11	0	94624
species	Leuconostoc carnosum	11	0	1252
species	Ectocarpus siliculosus virus 1	11	11	37665
species	Pseudoxanthomonas suwonensis	11	0	314722
species	Vibrio cholerae	11	2	666
species	secondary endosymbiont of Ctenarytaina eucalypti	11	11	1199245
species	Blastococcus saxobsidens	11	0	138336
species	Influenza B virus	11	11	11520
species	Burkholderia multivorans	11	0	87883
species	Azospirillum brasilense	11	0	192
species	Azorhizobium caulinodans	11	0	7
species	Sphaerochaeta pleomorpha	10	0	1131707
species	Streptosporangium roseum	10	0	2001
species	Tistrella mobilis	10	0	171437
species	Enterobacter lignolyticus	10	0	1334193
species	Rubrobacter xylanophilus	10	0	49319
species	Eubacterium eligens	10	0	39485
species	Marinobacter hydrocarbonoclasticus	10	2	2743
species	Cotesia congregata bracovirus	10	10	39640
species	Faecalibacterium prausnitzii	10	0	853
species	Rickettsia africae	10	0	35788
species	Acidothermus cellulolyticus	10	0	28049
species	Citrobacter rodentium	10	0	67825
species	Mycoplasma pulmonis	10	0	2107
species	Citrobacter koseri	10	0	545
species	Thermoanaerobacter wiegelii	10	0	46354
species	Geobacillus thermoleovorans	10	0	33941
species	Serratia symbiotica	10	0	138074
species	Pelagibacterium halotolerans	10	0	531813
species	Corynebacterium ulcerans	9	7	65058
species	Oceanimonas sp. GK1	9	9	511062
species	Oligotropha carboxidovorans	9	9	40137
species	Halomonas elongata	9	0	2746
species	Gallibacterium anatis	9	0	750
species	Desulfurispirillum indicum	9	0	936456
species	Ectromelia virus	9	9	12643
species	Sphaerochaeta coccoides	9	0	273376
species	Bifidobacterium bifidum	9	8	1681
species	Nitrobacter winogradskyi	9	0	913
species	Alistipes shahii	9	0	328814
species	Dickeya dadantii	9	0	204038
species	Candidatus Rickettsia amblyommii	9	0	33989
species	Solitalea canadensis	9	0	995
species	Catenulispora acidiphila	9	0	304895
species	Borrelia valaisiana	9	0	62088
species	Thermosediminibacter oceani	9	0	291990
species	Enterobacteria phage lambda	8	8	10710
species	Cellulomonas fimi	8	0	1708
species	[Eubacterium] cylindroides	8	0	39483
species	Pantoea ananatis	8	6	553
species	Campylobacter hominis	8	0	76517
species	Thermus scotoductus	8	0	37636
species	Tsukamurella paurometabola	8	0	2061
species	Murid herpesvirus 2	8	8	28304
species	Desulfovibrio vulgaris	8	4	881
species	Rhodomicrobium vannielii	8	0	1069
species	Pantoea sp. At-9b	8	8	592316
species	[Ruminococcus] torques	8	0	33039
species	Xanthomonas oryzae	8	4	347
species	Sinorhizobium meliloti	8	6	382
species	Erwinia sp. Ejp617	8	8	215689
species	Gordonia sp. KTR9	8	8	337191
species	Rhodococcus pyridinivorans	8	0	103816
species	Bovine parainfluenza virus 3	8	8	11215
species	Coxiella burnetii	8	4	777
species	Shewanella violacea	8	0	60217
species	Thermus thermophilus	8	5	274
species	Corallococcus coralloides	8	0	184914
species	Shigella flexneri	8	6	623
species	Photorhabdus asymbiotica	8	8	291112
species	Cellvibrio japonicus	7	0	155077
species	Pseudoxanthomonas spadix	7	0	415229
species	Bifidobacterium thermophilum	7	0	33905
species	Yersinia pseudotuberculosis	7	0	633
species	Erysipelothrix rhusiopathiae	7	0	1648
species	Ruminococcus albus	7	0	1264
species	Gluconacetobacter diazotrophicus	7	0	33996
species	Streptococcus sp. I-G2	7	7	1156431
species	Belliella baltica	7	0	232259
species	Mycobacterium sp. JLS	7	7	164757
species	Megamonas hypermegale	7	0	158847
species	Actinobacillus suis	7	0	716
species	Alteromonas macleodii	7	6	28108
species	Methanococcus voltae	7	0	2188
species	Candidatus Hamiltonella defensa	7	0	138072
species	Mycoplasma ovis	7	0	171632
species	Pectobacterium atrosepticum	7	0	29471
species	Thiomicrospira crunogena	7	0	39765
species	Saccharomonospora viridis	7	0	1852
species	Rhodococcus equi	7	0	43767
species	Saprospira grandis	7	0	1008
species	Haemophilus ducreyi	7	0	730
species	Serratia proteamaculans	7	0	28151
species	Mesorhizobium opportunistum	7	0	593909
species	Alicyclobacillus acidocaldarius	7	0	405212
species	Frog virus 3	7	7	10493
species	Actinoplanes missouriensis	7	0	1866
species	Mycoplasma genitalium	7	0	2097
species	Clostridium botulinum	7	6	1491
species	Arcanobacterium haemolyticum	7	0	28264
species	Corynebacterium pseudotuberculosis	7	1	1719
species	Lactobacillus sakei	7	0	1599
species	Acidovorax avenae	7	0	80867
species	Opitutus terrae	7	0	107709
species	Candidatus Sulcia muelleri	7	1	336810
species	Lactobacillus kefiranofaciens	7	0	267818
species	Bifidobacterium dentium	7	0	1689
species	Flavobacterium branchiophilum	7	0	55197
species	alpha proteobacterium HIMB59	7	7	744985
species	Nautilia profundicola	7	0	244787
species	Parvibaculum lavamentivorans	7	0	256618
species	Streptomyces davawensis	7	0	348043
species	Shewanella baltica	7	5	62322
species	Orientia tsutsugamushi	7	7	784
species	Acidaminococcus intestini	6	0	187327
species	Vibrio campbellii	6	0	680
species	Campylobacter coli	6	0	195
species	Serratia plymuthica	6	0	82996
species	Emiliania huxleyi virus 86	6	6	181082
species	Streptomyces avermitilis	6	0	33903
species	Streptomyces hygroscopicus	6	0	1912
species	Tolumonas auensis	6	0	43948
species	Burkholderia thailandensis	6	0	57975
species	Mycoplasma putrefaciens	6	6	2123
species	Polaromonas sp. JS666	6	6	296591
species	Erwinia pyrifoliae	6	0	79967
species	Burkholderia phymatum	6	0	148447
species	Aerococcus urinae	6	0	1376
species	Bacteriovorax marinus	6	0	97084
species	Cardinium endosymbiont of Encarsia pergandiella	6	0	249402
species	Leifsonia xyli	6	3	1575
species	Phaeobacter gallaeciensis	6	0	60890
species	Human adenovirus B	6	6	108098
species	Geitlerinema sp. PCC 7407	6	6	1173025
species	Candidatus Tremblaya princeps	6	6	189385
species	Conexibacter woesei	6	0	191495
species	Cupriavidus taiwanensis	6	0	164546
species	Sphaerobacter thermophilus	6	0	2057
species	Bifidobacterium breve	6	6	1685
species	Isoptericola variabilis	6	0	139208
species	Phycisphaera mikurensis	6	0	547188
species	Legionella longbeachae	6	0	450
species	Haliangium ochraceum	6	0	80816
species	Modestobacter marinus	6	6	477641
species	Paracoccus denitrificans	6	0	266
species	Chromobacterium violaceum	6	0	536
species	Arthrobacter phenanthrenivorans	6	0	361575
species	Kineococcus radiotolerans	6	0	131568
species	Staphylococcus aureus subsp. aureus MSHR1132	6	6	985002
species	Helicobacter cinaedi	6	6	213
species	Burkholderia sp. CCGE1002	6	6	640511
species	Enterococcus casseliflavus	6	0	37734
species	Mycobacterium leprae	6	6	1769
species	Salinarchaeum sp. Harcht-Bsk1	6	6	1333523
species	Fretibacterium fastidiosum	6	6	651822
species	Spirosoma linguale	6	0	108
species	Burkholderia rhizoxinica	6	0	412963
species	Streptomyces venezuelae	6	0	54571
species	Nocardia brasiliensis	6	0	37326
species	Mesorhizobium loti	5	0	381
species	Frankia sp. EuI1c	5	5	298654
species	Psychromonas ingrahamii	5	0	357794
species	Exiguobacterium antarcticum	5	0	132920
species	Streptomyces fulvissimus	5	0	68202
species	Mycobacterium chubuense	5	0	1800
species	Rhodococcus jostii	5	0	132919
species	Solibacillus silvestris	5	0	76853
species	Synechococcus sp. PCC 7502	5	5	1173263
species	Candidatus Symbiobacter mobilis	5	0	1436290
species	Mycobacterium neoaurum	5	0	1795
species	Mycobacterium avium	5	3	1764
species	Natrialba magadii	5	0	13769
species	Mesorhizobium australicum	5	0	536018
species	Streptococcus dysgalactiae	5	0	1334
species	Candidatus Hodgkinia cicadicola	5	0	573658
species	Acidovorax citrulli	5	0	80869
species	Bdellovibrio exovorus	5	0	453816
species	Macrococcus caseolyticus	5	0	69966
species	Methylotenera versatilis	5	0	1055487
species	Anaerolinea thermophila	5	0	167964
species	Mycobacterium gilvum	5	4	1804
species	Amycolatopsis mediterranei	5	5	33910
species	Polynucleobacter necessarius	5	0	576610
species	Hyphomicrobium denitrificans	5	1	53399
species	Bifidobacterium adolescentis	5	0	1680
species	Aeromonas veronii	5	0	654
species	Thermodesulfobacterium geofontis	5	0	1295609
species	Mycobacterium sp. JDM601	5	5	875328
species	Mycoplasma cynos	5	0	171284
species	Yersinia pestis	5	2	632
species	Lactobacillus ruminis	5	0	1623
species	Methylomicrobium alcaliphilum	5	0	271065
species	Halorhodospira halophila	5	0	1053
species	Caulobacter sp. K31	5	5	366602
species	Nitrosomonas sp. AL212	5	5	153948
species	Candidatus Phytoplasma mali	5	5	37692
species	Helicobacter cetorum	5	0	138563
species	Campylobacter curvus	5	0	200
species	Bifidobacterium animalis	5	3	28025
species	Cupriavidus pinatubonensis	5	0	248026
species	Pseudoalteromonas sp. SM9913	5	5	234831
species	Paludibacter propionicigenes	4	0	185300
species	Clostridium thermocellum	4	4	1515
species	Paracoccus aminophilus	4	0	34003
species	Ketogulonicigenium vulgare	4	4	92945
species	Thiobacillus denitrificans	4	0	36861
species	Salmonella bongori	4	4	54736
species	Helicobacter bizzozeronii	4	0	56877
species	Salinispora arenicola	4	0	168697
species	Vibrio vulnificus	4	1	672
species	Desulfotomaculum acetoxidans	4	0	58138
species	Pseudonocardia dioxanivorans	4	0	240495
species	Corynebacterium terpenotabidum	4	0	89154
species	Halanaerobium praevalens	4	0	2331
species	Fervidobacterium nodosum	4	0	2424
species	Caldilinea aerophila	4	0	133453
species	Brachyspira murdochii	4	0	84378
species	Xylella fastidiosa	4	3	2371
species	Rhodospirillum centenum	4	0	34018
species	Oscillatoria acuminata	4	0	118323
species	Sphingobacterium sp. 21	4	4	743722
species	Beutenbergia cavernae	4	0	84757
species	Methylocystis sp. SC2	4	4	187303
species	Candidatus Tremblaya phenacola	4	0	1010676
species	Edwardsiella ictaluri	4	0	67780
species	Streptomyces collinus	4	0	42684
species	Saccharothrix espanaensis	4	0	103731
species	Desulfarculus baarsii	4	0	453230
species	Deinococcus gobiensis	4	0	502394
species	Bacillus licheniformis	4	0	1402
species	Eubacterium rectale	4	1	39491
species	Frankia alni	4	0	1859
species	Lactobacillus plantarum	4	0	1590
species	Thermoanaerobacterium saccharolyticum	4	0	28896
species	Hyphomicrobium sp. MC1	4	4	717785
species	Aeromonas salmonicida	4	0	645
species	Streptomyces rapamycinicus	4	0	1226757
species	Bacillus amyloliquefaciens	4	0	1390
species	Leuconostoc kimchii	4	0	136609
species	Burkholderia xenovorans	4	0	36873
species	Caulobacter segnis	4	0	88688
species	Treponema primitia	4	0	88058
species	Halorhabdus utahensis	4	0	146826
species	Methylococcus capsulatus	4	0	414
species	Bacteroides salanitronis	4	0	376805
species	Leuconostoc citreum	4	0	33964
species	Stackebrandtia nassauensis	4	0	283811
species	Idiomarina loihiensis	4	4	135577
species	Isosphaera pallida	4	0	128
species	Thermodesulfatator indicus	4	0	171695
species	Actinoplanes sp. N902-109	4	4	649831
species	Mycoplasma gallisepticum	4	2	2096
species	Photobacterium profundum	4	0	74109
species	Dehalococcoides mccartyi	4	4	61435
species	[Clostridium] sticklandii	4	4	1511
species	Nocardia cyriacigeorgica	4	0	135487
species	Blattabacterium sp. (Blattella germanica)	4	0	624186
species	Flavobacterium johnsoniae	4	0	986
species	Lactobacillus johnsonii	4	4	33959
species	Desulfovibrio alaskensis	4	0	58180
species	Saccharophagus degradans	4	0	86304
species	Runella slithyformis	4	0	106
species	Klebsiella variicola	4	0	244366
species	Nocardiopsis dassonvillei	3	0	2014
species	Lactobacillus casei	3	0	1582
species	Enterococcus faecium	3	1	1352
species	Albidiferax ferrireducens	3	0	192843
species	Pseudomonas phage LKA1	3	3	386793
species	Pseudovibrio sp. FO-BEG1	3	3	911045
species	Actinoplanes sp. SE50/110	3	3	134676
species	Parachlamydia acanthamoebae	3	0	83552
species	Candidatus Accumulibacter phosphatis	3	0	327160
species	[Cellvibrio] gilvus	3	0	11
species	Actinosynnema mirum	3	0	40567
species	Syntrophus aciditrophicus	3	0	316277
species	Heliobacterium modesticaldum	3	0	35701
species	Pandoraea pnomenusa	3	0	93220
species	Candidatus Liberibacter americanus	3	0	309868
species	Dechloromonas aromatica	3	0	259537
species	Hyphomicrobium nitrativorans	3	0	1427356
species	Nocardia farcinica	3	0	37329
species	Asticcacaulis excentricus	3	0	78587
species	Enterobacter sp. 638	3	3	399742
species	Blattabacterium sp. (Blaberus giganteus)	3	3	1186051
species	Natronococcus occultus	3	0	29288
species	Desulfobulbus propionicus	3	0	894
species	Borrelia recurrentis	3	0	44449
species	Arthrobacter chlorophenolicus	3	0	85085
species	Caldanaerobacter subterraneus	3	0	911092
species	Borrelia duttonii	3	0	40834
species	Frankia sp. EAN1pec	3	3	298653
species	Cytophaga hutchinsonii	3	0	985
species	Rahnella aquatilis	3	0	34038
species	Azoarcus sp. BH72	3	3	62928
species	Streptococcus pasteurianus	3	0	197614
species	Hyphomonas neptunium	3	0	81032
species	Anaeromyxobacter sp. Fw109-5	3	3	404589
species	Paenibacillus polymyxa	3	2	1406
species	Burkholderia sp. RPE64	3	3	758793
species	Magnetospirillum gryphiswaldense	3	0	55518
species	Alkalilimnicola ehrlichii	3	0	351052
species	Myxococcus xanthus	3	0	34
species	Microlunatus phosphovorus	3	0	29405
species	Azoarcus sp. KH32C	3	3	748247
species	Mycoplasma fermentans	3	3	2115
species	Calothrix parietina	3	0	32054
species	Gallionella capsiferriformans	3	0	370405
species	Zymomonas mobilis	3	0	542
species	Halovivax ruber	3	0	387341
species	Parvularcula bermudensis	3	0	208216
species	Spiribacter salinus	3	0	1335746
species	Methanobrevibacter ruminantium	3	0	83816
species	Halothece sp. PCC 7418	3	3	65093
species	Thalassolituus oleivorans	3	0	187493
species	Gluconobacter oxydans	3	0	442
species	Cercopithecine herpesvirus 5	3	3	50292
species	Burkholderia sp. CCGE1003	3	3	640512
species	Caldicellulosiruptor saccharolyticus	3	0	44001
species	Rhodanobacter denitrificans	3	3	666685
species	Xenorhabdus bovienii	3	0	40576
species	Sulfobacillus acidophilus	3	3	53633
species	Glaciecola nitratireducens	3	0	300231
species	Phaeobacter inhibens	3	0	221822
species	Pandoraea sp. RB-44	3	3	1380774
species	Enterobacter sp. R4-368	3	3	1166130
species	Xylanimonas cellulosilytica	3	0	186189
species	Actinoplanes friuliensis	3	0	196914
species	Clostridium acetobutylicum	3	3	1488
species	Salinispora tropica	3	0	168695
species	Alcanivorax dieselolei	3	0	285091
species	Methanolobus psychrophilus	3	0	420950
species	Psychroflexus torquis	3	0	57029
species	Rhodospirillum photometricum	3	0	1084
species	Streptomyces griseus	3	0	1911
species	Marinomonas sp. MWYL1	3	3	400668
species	Ehrlichia chaffeensis	2	0	945
species	Variola virus	2	2	10255
species	Frateuria aurantia	2	0	81475
species	Alphapapillomavirus 7	2	2	337042
species	Pseudomonas phage D3	2	2	31535
species	Niastella koreensis	2	0	354356
species	Desulfotalea psychrophila	2	0	84980
species	Streptomyces flavogriseus	2	0	67299
species	Meiothermus ruber	2	0	277
species	Exiguobacterium sibiricum	2	0	332410
species	Bordetella avium	2	0	521
species	Burkholderia phenoliruptrix	2	0	252970
species	Mahella australiensis	2	0	252966
species	Burkholderia vietnamiensis	2	0	60552
species	Acetohalobium arabaticum	2	0	28187
species	Thermobifida fusca	2	0	2021
species	Streptomyces scabiei	2	0	1930
species	Desulfococcus oleovorans	2	0	181663
species	Haloferax volcanii	2	0	2246
species	Thermoanaerobacter mathranii	2	0	583357
species	Methylobacillus flagellatus	2	0	405
species	Trichoplusia ni ascovirus 2c	2	2	328615
species	Cowpox virus	2	2	10243
species	Shewanella denitrificans	2	0	192073
species	Pedobacter saltans	2	0	151895
species	Bacteroides thetaiotaomicron	2	0	818
species	Roseburia hominis	2	0	301301
species	Spiribacter sp. UAH-SP71	2	2	1335757
species	Methanomethylovorans hollandica	2	0	101192
species	Rhinovirus A	2	2	147711
species	Serratia liquefaciens	2	0	614
species	Macacine herpesvirus 1	2	2	10325
species	Desulfotomaculum ruminis	2	0	1564
species	Cucurbit yellow stunting disorder virus	2	2	51330
species	Paenibacillus sp. JDR-2	2	2	324057
species	Mycobacterium rhodesiae	2	0	36814
species	Streptococcus uberis	2	0	1349
species	Aromatoleum aromaticum	2	0	551760
species	Verrucosispora maris	2	0	1003110
species	Bacteroides xylanisolvens	2	0	371601
species	Anoxybacillus flavithermus	2	0	33934
species	Tupaiid herpesvirus 1	2	2	10397
species	Methanosarcina barkeri	2	0	2208
species	Leptospira biflexa	2	0	172
species	Bacillus subtilis	2	0	1423
species	Zobellia galactanivorans	2	2	63186
species	Streptococcus infantarius	2	0	102684
species	Streptococcus phage 5093	2	2	646413
species	Shewanella putrefaciens	2	0	24
species	Caulobacter vibrioides	2	0	155892
species	Pseudomonas phage MP38	2	2	505292
species	Roseobacter litoralis	2	0	42443
species	Methanobrevibacter sp. AbM4	2	2	224719
species	Bovine herpesvirus 5	2	2	35244
species	Acidithiobacillus ferrooxidans	2	2	920
species	Ruminococcus champanellensis	2	0	1161942
species	Granulibacter bethesdensis	2	0	364410
species	Trichodesmium erythraeum	2	0	1206
species	Deinococcus radiodurans	2	0	1299
species	Krokinobacter sp. 4H-3-7-5	2	2	983548
species	Choristoneura fumiferana DEF multiple nucleopolyhedrovirus	2	2	74660
species	Methanococcus aeolicus	2	0	42879
species	Mycoplasma leachii	2	1	2105
species	Melioribacter roseus	2	0	1134405
species	Campylobacter lari	2	0	201
species	Streptococcus macedonicus	2	0	59310
species	Kitasatospora setae	2	0	2066
species	Kangiella koreensis	2	0	261964
species	Sodalis glossinidius	2	0	63612
species	Geobacillus sp. GHH01	2	2	1233873
species	Xanthomonas albilineans	2	0	29447
species	Bifidobacterium asteroides	2	0	1684
species	Mamestra configurata nucleopolyhedrovirus A	2	2	207830
species	Agrotis segetum nucleopolyhedrovirus	2	2	31508
species	Leisingera methylohalidivorans	2	0	133924
species	Dinoroseobacter shibae	2	0	215813
species	Pyrolobus fumarii	2	0	54252
species	beta proteobacterium CB	2	2	543913
species	Elusimicrobium minutum	2	0	423605
species	Teredinibacter turnerae	2	0	2426
species	Clostridium kluyveri	2	2	1534
species	Marinithermus hydrothermalis	2	0	186192
species	Arthrobacter aurescens	2	0	43663
species	Torque teno virus 16	2	2	687355
species	Advenella kashmirensis	2	0	310575
species	Streptococcus phage EJ-1	2	2	12402
species	candidate division SR1 bacterium RAAC1_SR1_1	2	2	1394709
species	Helicobacter pylori	2	0	210
species	Clostridium acidurici	2	0	1556
species	Acidithiobacillus ferrivorans	2	0	160808
species	Mycobacterium tuberculosis	2	0	1773
species	Dyadobacter fermentans	2	0	94254
species	Ruminococcus sp. SR1/5	2	2	657323
species	Streptomyces violaceusniger	2	0	68280
species	Thiocystis violascens	2	0	73141
species	Shigella sonnei	2	1	624
species	Burkholderia pseudomallei	2	2	28450
species	Blattabacterium sp. (Mastotermes darwiniensis)	2	0	39768
species	Candidatus Blochmannia vafer	2	0	251535
species	Oscillatoria nigro-viridis	2	0	482564
species	Anaeromyxobacter dehalogenans	2	0	161493
species	Candidatus Zinderia insecticola	2	0	884215
species	Mycoplasma conjunctivae	2	0	45361
species	Halyomorpha halys symbiont	2	2	1235990
species	Enterobacteria phage T4 sensu lato	2	0	348604
species	Microcystis aeruginosa	2	0	1126
species	Human herpesvirus 4	2	0	10376
species	Enterobacteria phage G4 sensu lato	2	2	374844
species	Roseburia intestinalis	2	0	166486
species	Pelobacter carbinolicus	2	0	19
species	Enterococcus mundtii	2	0	53346
species	Staphylococcus carnosus	2	0	1281
species	Bacillus coagulans	2	0	1398
species	Clostridium saccharolyticum	2	0	84030
species	Vibrio parahaemolyticus	1	1	670
species	Brachyspira pilosicoli	1	1	52584
species	Candidatus Nasuia deltocephalinicola	1	0	1160784
species	Herpetosiphon aurantiacus	1	0	65
species	Sulfurihydrogenibium sp. YO3AOP1	1	1	436114
species	Anaerobaculum mobile	1	0	97477
species	Human herpesvirus 7	1	1	10372
species	Clostridium phytofermentans	1	0	66219
species	Ferrimonas balearica	1	0	44012
species	Mycobacterium canettii	1	1	78331
species	Enterobacteria phage St-1	1	1	10845
species	Maricaulis maris	1	0	74318
species	Natronomonas moolapensis	1	0	416273
species	Spiroplasma diminutum	1	0	216936
species	Bacillus atrophaeus	1	0	1452
species	Candidatus Endolissoclinum faulkneri	1	0	1263979
species	Lactobacillus brevis	1	1	1580
species	Thioalkalivibrio nitratireducens	1	0	186931
species	Calditerrivibrio nitroreducens	1	0	477976
species	Nostoc punctiforme	1	0	272131
species	Thermoanaerobacterium thermosaccharolyticum	1	1	1517
species	Desulfovibrio desulfuricans	1	0	876
species	Coriobacterium glomerans	1	0	33871
species	Deinococcus peraridilitoris	1	0	432329
species	Truepera radiovictrix	1	0	332249
species	Ureaplasma parvum	1	0	134821
species	Thioalkalivibrio sp. K90mix	1	1	396595
species	Chlamydia pecorum	1	1	85991
species	Ehrlichia ruminantium	1	1	779
species	Acidobacterium capsulatum	1	0	33075
species	Glaciecola sp. 4H-3-7+YE-5	1	1	983545
species	Caldicellulosiruptor bescii	1	0	31899
species	Weissella koreensis	1	0	165096
species	Human parainfluenza virus 2	1	1	11212
species	Methanosaeta harundinacea	1	0	301375
species	Candidatus Desulforudis audaxviator	1	0	471827
species	Singulisphaera acidiphila	1	0	466153
species	Flexistipes sinusarabici	1	0	2352
species	Aquifex aeolicus	1	0	63363
species	Photorhabdus luminescens	1	0	29488
species	Sideroxydans lithotrophicus	1	0	63745
species	Erwinia tasmaniensis	1	0	338565
species	Vibrio anguillarum	1	0	55601
species	Desulfobacula toluolica	1	0	28223
species	Geobacter sp. M18	1	1	443143
species	Mycoplasma suis	1	0	57372
species	Bacillus halodurans	1	0	86665
species	Pectobacterium wasabiae	1	0	55208
species	Eubacterium limosum	1	0	1736
species	Meiothermus silvanus	1	0	52022
species	Ovine herpesvirus 2	1	1	10398
species	Thermaerobacter marianensis	1	0	73919
species	Bordetella bronchiseptica	1	0	518
species	Desulfomonile tiedjei	1	0	2358
species	Synechococcus sp. PCC 7002	1	1	32049
species	Geobacillus sp. JF8	1	1	1345697
species	Bacillus cellulosilyticus	1	0	1413
species	Oenococcus oeni	1	0	1247
species	Candidatus Kinetoplastibacterium oncopeltii	1	0	994696
species	Equid herpesvirus 2	1	1	12657
species	Candidatus Midichloria mitochondrii	1	0	234827
species	Cyanobium gracile	1	0	59930
species	Rhodospirillum rubrum	1	1	1085
species	Staphylococcus pseudintermedius	1	1	283734
species	Thioflavicoccus mobilis	1	0	80679
species	Desulfovibrio gigas	1	0	879
species	Candidatus Moranella endobia	1	1	1048758
species	Wolbachia endosymbiont of Onchocerca ochengi	1	1	100901
species	Thermobaculum terrenum	1	0	166501
species	Rhodobacter capsulatus	1	0	1061
species	Shigella dysenteriae	1	0	622
species	Simiduia agarivorans	1	0	447471
species	Chlorobium phaeobacteroides	1	0	1096
species	Methanococcus maripaludis	1	0	39152
species	Methanobrevibacter smithii	1	0	2173
species	Shewanella oneidensis	1	0	70863
species	Lactobacillus paracasei	1	0	1597
species	Hirschia baltica	1	0	2724
species	Acidimicrobium ferrooxidans	1	0	53635
species	Geobacillus thermoglucosidasius	1	0	1426
species	Cellulosilyticum lentocellum	1	0	29360
species	Sulfolobus tokodaii	1	0	111955
species	Geobacter metallireducens	1	0	28232
species	Leuconostoc mesenteroides	1	0	1245
species	Vibrio nigripulchritudo	1	1	28173
species	Desulfitobacterium dichloroeliminans	1	0	233055
species	Campoletis sonorensis ichnovirus	1	1	10484
species	Weeksella virosa	1	0	1014
species	Coprococcus catus	1	0	116085
species	secondary endosymbiont of Heteropsylla cubana	1	1	134287
species	Syntrophothermus lipocalidus	1	0	86170
species	Candidatus Puniceispirillum marinum	1	0	767892
species	Marinobacter sp. BSs20148	1	1	490759
species	Chamaesiphon minutus	1	0	1173032
species	Thermacetogenium phaeum	1	0	85874
species	Methylomonas methanica	1	0	421
species	Thiomonas arsenitoxydans	1	1	426114
species	Pirellula staleyi	1	0	125
species	Vibrio splendidus	1	0	29497
species	Desulfovibrio africanus	1	0	873
species	Deinococcus deserti	1	0	310783
species	Pleurocapsa minor	1	0	54308
species	Pelodictyon phaeoclathratiforme	1	0	34090
species	Thermoanaerobacter italicus	1	0	108150
species	Amphibacillus xylanus	1	0	1449
species	Methylocella silvestris	1	0	199596
species	Carboxydothermus hydrogenoformans	1	0	129958
species	Lactococcus garvieae	1	1	1363
species	Allochromatium vinosum	1	0	1049
species	Rahnella sp. Y9602	1	1	741091
species	Streptomyces bingchenggensis	1	0	379067
species	Candidatus Kinetoplastibacterium crithidii	1	1	33056
species	Francisella tularensis	1	1	263
species	Candidatus Pelagibacter sp. IMCC9063	1	1	1002672
species	Pyrobaculum aerophilum	1	0	13773
species	delta proteobacterium BABL1	1	1	673862
species	Burkholderia glumae	1	0	337
species	Geobacter uraniireducens	1	0	351604
species	Rhodopirellula baltica	1	0	265606
subspecies	Fusobacterium nucleatum subsp. animalis	658	0	76859
subspecies	Fusobacterium nucleatum subsp. nucleatum	440	0	76856
subspecies	Fusobacterium nucleatum subsp. vincentii	339	0	155615
subspecies	Pseudomonas brassicacearum subsp. brassicacearum	267	0	86264
subspecies	Morganella morganii subsp. morganii	210	0	180434
subspecies	Enterobacter cloacae subsp. cloacae	139	2	336306
subspecies	Staphylococcus aureus subsp. aureus	108	56	46170
subspecies	Salmonella enterica subsp. enterica	58	13	59201
subspecies	Streptococcus constellatus subsp. pharyngis	48	48	184250
subspecies	Lactococcus lactis subsp. cremoris	39	34	1359
subspecies	Propionibacterium freudenreichii subsp. shermanii	27	0	1752
subspecies	Mycobacterium abscessus subsp. bolletii	25	21	319705
subspecies	Campylobacter jejuni subsp. jejuni	24	0	32022
subspecies	Leuconostoc gasicomitatum	23	0	115778
subspecies	Pectobacterium carotovorum subsp. carotovorum	22	10	555
subspecies	Selenomonas ruminantium subsp. lactilytica	21	0	114197
subspecies	Salmonella enterica subsp. arizonae	15	0	59203
subspecies	Lactococcus lactis subsp. lactis	14	11	1360
subspecies	Staphylococcus saprophyticus subsp. saprophyticus	12	0	147452
subspecies	Pasteurella multocida subsp. multocida	11	0	44283
subspecies	Yersinia enterocolitica subsp. palearctica	11	1	150053
subspecies	Streptococcus equi subsp. zooepidemicus	9	9	40041
subspecies	Lactobacillus sakei subsp. sakei	7	0	214326
subspecies	Clavibacter michiganensis subsp. michiganensis	7	0	33013
subspecies	Acidovorax avenae subsp. avenae	7	0	80870
subspecies	Alicyclobacillus acidocaldarius subsp. acidocaldarius	7	7	1388
subspecies	Streptomyces hygroscopicus subsp. jinggangensis	6	6	311982
subspecies	Klebsiella pneumoniae subsp. pneumoniae	5	1	72407
subspecies	Streptococcus dysgalactiae subsp. equisimilis	5	2	119602
subspecies	Aeromonas salmonicida subsp. salmonicida	4	0	29491
subspecies	Legionella pneumophila subsp. pneumophila	4	2	91891
subspecies	Nocardiopsis dassonvillei subsp. dassonvillei	3	0	568208
subspecies	Lactobacillus plantarum subsp. plantarum	3	0	337330
subspecies	Caldanaerobacter subterraneus subsp. tengcongensis	3	0	119072
subspecies	Enterobacter cloacae subsp. dissolvens	3	0	69219
subspecies	Polynucleobacter necessarius subsp. necessarius	3	0	44014
subspecies	Zymomonas mobilis subsp. mobilis	3	0	120045
subspecies	Bacillus amyloliquefaciens subsp. plantarum	3	0	1054400
subspecies	Streptomyces griseus subsp. griseus	3	0	67263
subspecies	Leifsonia xyli subsp. xyli	3	0	59736
subspecies	Yersinia pestis subsp. pestis	3	0	385964
subspecies	Bifidobacterium longum subsp. longum	2	0	1679
subspecies	Streptococcus equi subsp. equi	2	0	148942
subspecies	Bifidobacterium animalis subsp. lactis	2	2	302911
subspecies	Polynucleobacter necessarius subsp. asymbioticus	2	0	576611
subspecies	Streptococcus infantarius subsp. infantarius	2	0	150054
subspecies	Staphylococcus carnosus subsp. carnosus	2	0	147448
subspecies	Thermoanaerobacter mathranii subsp. mathranii	2	0	57481
subspecies	Clavibacter michiganensis subsp. nebraskensis	2	0	31963
subspecies	Aeromonas hydrophila subsp. hydrophila	2	0	196023
subspecies	Desulfovibrio desulfuricans subsp. desulfuricans	1	0	115117
subspecies	Bifidobacterium longum subsp. infantis	1	0	1682
subspecies	Lactobacillus paracasei subsp. paracasei	1	0	47714
subspecies	Leuconostoc mesenteroides subsp. mesenteroides	1	1	33967
subspecies	Photorhabdus luminescens subsp. laumondii	1	0	141679
strain	Achromobacter xylosoxidans NBRC 15126 = ATCC 27061	786006	786006	1216976
strain	Moraxella catarrhalis RH4	238391	238391	749219
strain	Corynebacterium aurimucosum ATCC 700975	19337	19337	548476
strain	Neisseria gonorrhoeae TCDC-NG08107	16797	16797	940296
strain	Rhizobium/Agrobacterium group	4213	593	227290
strain	Pseudomonas fluorescens SBW25	3148	3148	216595
strain	Delftia acidovorans SPH-1	3096	3096	398578
strain	Pseudomonas fluorescens A506	2660	2660	1037911
strain	Prevotella melaninogenica ATCC 25845	2402	2402	553174
strain	Haemophilus parainfluenzae T3T1	2087	2087	862965
strain	Rothia mucilaginosa DY-18	2005	2005	680646
strain	Pseudomonas poae RE*1-1-14	1484	1484	1282356
strain	Veillonella parvula DSM 2008	1465	1465	479436
strain	Stenotrophomonas maltophilia JV3	1398	1398	868597
strain	Serratia marcescens WW4	1265	1265	435998
strain	Mycoplasma hyopneumoniae J	1208	1208	262719
strain	Corynebacterium callunae DSM 20147	1174	1174	1121353
strain	Neisseria meningitidis G2136	1151	1151	935599
strain	Pseudomonas mendocina NK-01	1012	1012	1001585
strain	Porphyromonas asaccharolytica DSM 20707	961	961	879243
strain	Pseudomonas mendocina ymp	913	913	399739
strain	Tannerella forsythia ATCC 43037	806	806	203275
strain	Pseudomonas fluorescens Pf0-1	805	805	205922
strain	Agrobacterium fabrum str. C58	747	747	176299
strain	Fusobacterium nucleatum subsp. animalis 4_8	658	658	469607
strain	Acinetobacter calcoaceticus PHEA-2	638	638	871585
strain	Haemophilus influenzae KR494	602	602	1334187
strain	Neisseria lactamica 020-06	593	593	489653
strain	Pseudomonas fluorescens F113	449	449	1114970
strain	Fusobacterium nucleatum subsp. nucleatum ATCC 25586	440	440	190304
strain	Stenotrophomonas maltophilia D457	422	422	1163399
strain	Mycoplasma arthritidis 158L3-1	412	412	243272
strain	Prevotella denticola F0289	402	402	767031
strain	Rothia dentocariosa ATCC 17931	396	396	762948
strain	Aggregatibacter aphrophilus NJ8700	382	382	634176
strain	Prevotella sp. oral taxon 299 str. F0039	363	363	575614
strain	Stenotrophomonas maltophilia K279a	354	354	522373
strain	Capnocytophaga ochracea DSM 7271	351	351	521097
strain	Finegoldia magna ATCC 29328	347	347	334413
strain	Fusobacterium nucleatum subsp. vincentii 3_1_36A2	339	339	469604
strain	Methylobacterium extorquens AM1	326	326	272630
strain	Corynebacterium resistens DSM 45100	326	326	662755
strain	Serratia marcescens FGI94	318	318	1249634
strain	Bacillus thuringiensis MC28	310	310	1195464
strain	Mycoplasma hyopneumoniae 232	297	297	295358
strain	Atopobium parvulum DSM 20469	296	296	521095
strain	Prevotella intermedia 17	280	280	246198
strain	Corynebacterium argentoratense DSM 44202	268	268	1348662
strain	Pseudomonas brassicacearum subsp. brassicacearum NFM421	267	267	994484
strain	Streptococcus suis JS14	228	228	945704
strain	Prevotella ruminicola 23	224	224	264731
strain	Cupriavidus metallidurans CH34	219	219	266264
strain	Morganella morganii subsp. morganii KT	210	210	1124991
strain	Influenza A virus (A/New York/392/2004(H3N2))	198	198	335341
strain	Streptococcus mitis B6	198	198	365659
strain	Bacteroides vulgatus ATCC 8482	194	194	435590
strain	Mycoplasma hominis ATCC 23114	190	190	347256
strain	Propionibacterium acnes ATCC 11828	190	190	1091045
strain	Lactobacillus gasseri ATCC 33323	186	186	324831
strain	Fibrella aestuarina BUZ 2	180	180	1166018
strain	Pseudomonas syringae pv. syringae B728a	178	178	205918
strain	Haemophilus influenzae PittEE	175	175	374930
strain	Tropheryma whipplei str. Twist	174	174	203267
strain	Leptotrichia buccalis C-1013-b	171	171	523794
strain	Pseudomonas entomophila L48	169	169	384676
strain	Haemophilus influenzae F3047	168	168	935897
strain	Streptococcus parasanguinis FW213	167	167	1114965
strain	Anaerococcus prevotii DSM 20548	165	165	525919
strain	Stenotrophomonas maltophilia R551-3	163	163	391008
strain	Streptobacillus moniliformis DSM 12112	163	163	519441
strain	Parabacteroides distasonis ATCC 8503	159	159	435591
strain	Tropheryma whipplei TW08/27	159	159	218496
strain	Corynebacterium halotolerans YIM 70093 = DSM 44683	154	154	1121362
strain	Burkholderiales Genera incertae sedis	154	11	224471
strain	Pseudomonas resinovorans NBRC 106553	154	154	1245471
strain	Pseudomonas syringae pv. tomato str. DC3000	148	148	223283
strain	Treponema brennaborense DSM 12168	146	146	906968
strain	Streptococcus sanguinis SK36	146	146	388919
strain	Pseudomonas protegens CHA0	145	145	1124983
strain	Methylobacterium radiotolerans JCM 2831	142	142	426355
strain	Pseudomonas fulva 12-X	140	140	743720
strain	Pseudomonas denitrificans ATCC 13867	130	130	1294143
strain	Micrococcus luteus NCTC 2665	130	130	465515
strain	Achromobacter xylosoxidans NH44784-1996	129	129	1167634
strain	Pseudomonas protegens Pf-5	127	127	220664
strain	Pseudomonas aeruginosa PA7	122	122	381754
strain	Leuconostoc gelidum JB7	121	121	1229756
strain	Ralstonia pickettii 12J	119	119	402626
strain	Pseudomonas syringae pv. phaseolicola 1448A	119	119	264730
strain	Pseudomonas putida W619	109	109	390235
strain	Treponema denticola ATCC 35405	106	106	243275
strain	Escherichia coli UMN026	104	104	585056
strain	Treponema pedis str. T A4	101	101	1291379
strain	Enterobacter cloacae subsp. cloacae NCTC 9394	99	99	718254
strain	Actinobacillus succinogenes 130Z	99	99	339671
strain	Pseudomonas putida GB-1	95	95	76869
strain	Prevotella dentalis DSM 3688	95	95	908937
strain	Streptococcus oralis Uo5	92	92	927666
strain	Pseudomonas putida H8234	90	90	1331671
strain	Kribbella flavida DSM 17836	83	83	479435
strain	Hahella chejuensis KCTC 2396	83	83	349521
strain	Methylibium petroleiphilum PM1	81	81	420662
strain	Alistipes finegoldii DSM 17242	77	77	679935
strain	Haemophilus influenzae 86-028NP	77	77	281310
strain	Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2	74	74	511995
strain	Pseudomonas putida NBRC 14164	74	74	1211579
strain	Ochrobactrum anthropi ATCC 49188	73	73	439375
strain	Methylobacterium populi BJ001	73	73	441620
strain	Jonesia denitrificans DSM 20603	73	73	471856
strain	Pseudomonas stutzeri DSM 4166	62	62	996285
strain	Sulfolobus islandicus M.16.27	61	61	427318
strain	Acinetobacter oleivorans DR1	61	61	436717
strain	Providencia stuartii MRSN 2154	60	60	1157951
strain	Enterococcus faecalis V583	60	60	226185
strain	Streptococcus parasanguinis ATCC 15912	59	59	760570
strain	Corynebacterium kroppenstedtii DSM 44385	58	58	645127
strain	Filifactor alocis ATCC 35896	58	58	546269
strain	Streptococcus pseudopneumoniae IS7493	58	58	1054460
strain	Aeromonas hydrophila ML09-119	58	58	1288394
strain	Staphylococcus epidermidis RP62A	53	53	176279
strain	Campylobacter concisus 13826	53	53	360104
strain	Selenomonas sputigena ATCC 35185	49	49	546271
strain	Laribacter hongkongensis HLHK9	48	48	557598
strain	Pseudomonas stutzeri CCUG 29243	48	48	1196835
strain	Kytococcus sedentarius DSM 20547	47	47	478801
strain	Propionibacterium avidum 44067	46	46	1170318
strain	Escherichia coli O157:H7 str. EC4115	44	44	444450
strain	Pseudomonas putida HB3267	44	44	1215088
strain	Sebaldella termitidis ATCC 33386	44	44	526218
strain	Mycoplasma hyopneumoniae 7422	43	43	754503
strain	Sphingomonas wittichii RW1	42	42	392499
strain	Magnetococcus marinus MC-1	42	42	156889
strain	Streptococcus oligofermentans AS 1.3089	42	42	1302863
strain	Pseudomonas stutzeri DSM 10701	41	41	1123519
strain	unclassified Peptostreptococcaceae	40	9	200630
strain	Gordonia bronchialis DSM 43247	39	39	526226
strain	Brevundimonas subvibrioides ATCC 15264	38	38	633149
strain	Sphingopyxis alaskensis RB2256	38	38	317655
strain	Buchnera aphidicola BCc	37	37	372461
strain	Streptococcus salivarius JIM8777	37	37	347253
strain	Staphylococcus haemolyticus JCSC1435	36	36	279808
strain	Acinetobacter baumannii AYE	35	35	509173
strain	Pseudomonas putida KT2440	35	35	160488
strain	Staphylococcus epidermidis ATCC 12228	35	35	176280
strain	Methylobacterium extorquens DM4	35	35	661410
strain	Streptococcus gordonii str. Challis substr. CH1	35	35	467705
strain	Leptothrix cholodnii SP-6	34	34	395495
strain	Aminobacterium colombiense DSM 12261	34	34	572547
strain	Pseudomonas stutzeri RCH2	34	34	644801
strain	Propionibacterium acnes 266	34	34	909952
strain	Corynebacterium maris DSM 45190	33	33	1224163
strain	Shimwellia blattae DSM 4481 = NBRC 105725	31	31	630626
strain	Streptomyces coelicolor A3(2)	31	31	100226
strain	Corynebacterium jeikeium K411	31	31	306537
strain	Saccharopolyspora erythraea NRRL 2338	30	30	405948
strain	Tetragenococcus halophilus NBRC 12172	30	30	945021
strain	Chromohalobacter salexigens DSM 3043	30	30	290398
strain	Pseudomonas putida ND6	30	30	231023
strain	Enterobacter cloacae subsp. cloacae ENHKU01	29	29	1211025
strain	Methylobacterium extorquens CM4	29	29	440085
strain	Xanthobacter autotrophicus Py2	29	29	78245
strain	Treponema succinifaciens DSM 2489	28	28	869209
strain	Agrobacterium vitis S4	28	28	311402
strain	Pseudomonas stutzeri A1501	28	28	379731
strain	Mycobacterium smegmatis JS623	28	28	710686
strain	Haemophilus somnus 129PT	27	27	205914
strain	Cryptobacterium curtum DSM 15641	27	27	469378
strain	Methanococcus vannielii SB	27	27	406327
strain	Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1	27	27	754252
strain	Mobiluncus curtisii ATCC 43063	27	27	548479
strain	Acinetobacter baumannii ATCC 17978	27	27	400667
strain	Rhizobium etli CIAT 652	27	27	491916
strain	Bibersteinia trehalosi USDA-ARS-USMARC-192	27	27	1171377
strain	Deinococcus geothermalis DSM 11300	27	27	319795
strain	Polymorphum gilvum SL003B-26A1	27	27	991905
strain	Intrasporangium calvum DSM 43043	26	26	710696
strain	Sanguibacter keddieii DSM 10542	26	26	446469
strain	Pseudomonas putida BIRD-1	25	25	931281
strain	Acidovorax ebreus TPSY	25	25	535289
strain	Marivirga tractuosa DSM 4126	25	25	643867
strain	Verminephrobacter eiseniae EF01-2	25	25	391735
strain	Megasphaera elsdenii DSM 20460	25	25	1064535
strain	Candidatus Liberibacter asiaticus str. gxpsy	25	25	1174529
strain	Phenylobacterium zucineum HLK1	25	25	450851
strain	Staphylococcus aureus subsp. aureus JH1	24	24	359787
strain	Haemophilus influenzae R2866	24	24	262728
strain	Rhizobium leguminosarum bv. trifolii WSM2304	24	24	395492
strain	Streptococcus pyogenes NZ131	24	24	471876
strain	Raoultella ornithinolytica B6	24	24	1286170
strain	Propionibacterium acidipropionici ATCC 4875	24	24	1171373
strain	Thermanaerovibrio acidaminovorans DSM 6589	24	24	525903
strain	Campylobacter jejuni subsp. jejuni PT14	24	24	1201032
strain	Microbacterium testaceum StLB037	23	23	979556
strain	Achromobacter xylosoxidans A8	23	23	762376
strain	Pseudomonas stutzeri ATCC 17588 = LMG 11199	23	23	96563
strain	Rhizobium tropici CIAT 899	23	23	698761
strain	Leuconostoc gasicomitatum LMG 18811	23	23	762550
strain	Paenibacillus mucilaginosus K02	23	23	997761
strain	Wolinella succinogenes DSM 1740	23	23	273121
strain	Rubrivivax gelatinosus IL144	22	22	983917
strain	Enterobacter asburiae LF7a	22	22	640513
strain	Dechlorosoma suillum PS	22	22	640081
strain	Staphylococcus warneri SG1	22	22	1194526
strain	Propionibacterium acnes HL096PA1	21	21	1134454
strain	Acinetobacter baumannii BJAB0715	21	21	1096996
strain	Collimonas fungivorans Ter331	21	21	1005048
strain	Lactobacillus rhamnosus GG	21	21	568703
strain	Streptococcus salivarius 57.I	21	21	1046629
strain	Amycolicicoccus subflavus DQS3-9A1	21	21	443218
strain	Selenomonas ruminantium subsp. lactilytica TAM6421	21	21	927704
strain	Herbaspirillum seropedicae SmR1	20	20	757424
strain	Bradyrhizobium diazoefficiens USDA 110	20	20	224911
strain	Baumannia cicadellinicola str. Hc (Homalodisca coagulata)	20	20	374463
strain	Methylobacterium nodulans ORS 2060	20	20	460265
strain	Capnocytophaga canimorsus Cc5	20	20	860228
strain	Novosphingobium aromaticivorans DSM 12444	20	20	279238
strain	Propionibacterium propionicum F0230a	20	20	767029
strain	Neisseria meningitidis alpha14	20	20	662598
strain	Mannheimia succiniciproducens MBEL55E	19	19	221988
strain	Ilyobacter polytropus DSM 2926	19	19	572544
strain	Corynebacterium efficiens YS-314	19	19	196164
strain	Streptococcus salivarius CCHSS3	19	19	1048332
strain	Bradyrhizobium japonicum USDA 6	19	19	1037409
strain	Chroococcidiopsis thermalis PCC 7203	19	19	251229
strain	Dichelobacter nodosus VCS1703A	19	19	246195
strain	Candidatus Riesia pediculicola USDA	18	18	515618
strain	Sphingobium chlorophenolicum L-1	18	18	690566
strain	Comamonas testosteroni CNB-2	18	18	688245
strain	Crinalium epipsammum PCC 9333	17	17	1173022
strain	Human coronavirus OC43	17	17	31631
strain	Lactobacillus crispatus ST1	17	17	748671
strain	Carnobacterium maltaromaticum LMA28	17	17	1234679
strain	Mesorhizobium ciceri biovar biserrulae WSM1271	17	17	765698
strain	Oscillibacter valericigenes Sjm18-20	17	17	693746
strain	Pseudomonas aeruginosa SCV20265	17	17	1427342
strain	Sinorhizobium fredii USDA 257	17	17	1185652
strain	Corynebacterium diphtheriae HC03	17	17	698969
strain	Xanthomonas campestris pv. vesicatoria str. 85-10	17	17	316273
strain	Flavobacterium indicum GPTSA100-9	17	17	1094466
strain	Bradyrhizobium oligotrophicum S58	17	17	1245469
strain	Thermodesulfobium narugense DSM 14796	17	17	747365
strain	Lawsonia intracellularis N343	17	17	1234378
strain	Mycoplasma hyorhinis HUB-1	17	17	872331
strain	Pseudomonas putida DOT-T1E	17	17	1196325
strain	Segniliparus rotundus DSM 44985	17	17	640132
strain	Enterobacter cloacae EcWSU1	17	17	1045856
strain	Porphyromonas gingivalis W83	16	16	242619
strain	Bacteroides helcogenes P 36-108	16	16	693979
strain	Buchnera aphidicola str. Bp (Baizongia pistaciae)	16	16	224915
strain	Rhizobium leguminosarum bv. viciae 3841	16	16	216596
strain	Erythrobacter litoralis HTCC2594	16	16	314225
strain	Rhodococcus erythropolis CCM2595	16	16	1136179
strain	Arthrobacter arilaitensis Re117	16	16	861360
strain	Olsenella uli DSM 7084	16	16	633147
strain	Burkholderia phytofirmans PsJN	15	15	398527
strain	Rhodopseudomonas palustris BisB18	15	15	316056
strain	Kocuria rhizophila DC2201	15	15	378753
strain	Pantoea vagans C9-1	15	15	712898
strain	Burkholderia gladioli BSR3	15	15	999541
strain	Xanthomonas campestris pv. campestris	15	13	340
strain	Methylobacterium extorquens PA1	15	15	419610
strain	Sphingobium japonicum UT26S	15	15	452662
strain	Sinorhizobium fredii NGR234	15	15	394
strain	Sinorhizobium fredii HH103	15	15	1117943
strain	Mycoplasma hyopneumoniae 7448	15	15	262722
strain	Butyrivibrio proteoclasticus B316	15	15	515622
strain	Agrobacterium radiobacter K84	15	15	311403
strain	Corynebacterium variabile DSM 44702	15	15	858619
strain	Salmonella enterica subsp. arizonae serovar 62:z4,z23:- str. RSK2980	15	15	882884
strain	Starkeya novella DSM 506	15	15	639283
strain	Brachybacterium faecium DSM 4810	15	15	446465
strain	Acinetobacter baumannii D1279779	15	15	945556
strain	Acinetobacter baumannii SDF	15	15	509170
strain	Burkholderia mallei NCTC 10229	14	14	412022
strain	Thermobispora bispora DSM 43833	14	14	469371
strain	Thioalkalivibrio sulfidophilus HL-EbGr7	14	14	396588
strain	Staphylococcus pasteuri SP1	14	14	1276282
strain	Geodermatophilus obscurus DSM 43160	14	14	526225
strain	Rhizobium leguminosarum bv. trifolii WSM1325	14	14	395491
strain	Bacillus infantis NRRL B-14911	14	14	1367477
strain	Burkholderia cenocepacia J2315	14	14	216591
strain	Ramlibacter tataouinensis TTB310	13	13	365046
strain	Lactobacillus sanfranciscensis TMW 1.1304	13	13	714313
strain	Rhodococcus opacus B4	13	13	632772
strain	Sphaerochaeta globosa str. Buddy	13	13	158189
strain	Streptococcus agalactiae ILRI005	13	13	1309807
strain	Erwinia billingiae Eb661	13	13	634500
strain	Nitrobacter hamburgensis X14	12	12	323097
strain	Azospirillum sp. B510	12	12	137722
strain	Neisseria meningitidis serogroup B	12	6	491
strain	Amycolatopsis orientalis HCCB10007	12	12	1156913
strain	Streptomyces cattleya NRRL 8057 = DSM 46488	12	12	1003195
strain	Lactobacillus rhamnosus LOCK900	12	12	1316933
strain	Nocardiopsis alba ATCC BAA-2165	12	12	1205910
strain	Sorangium cellulosum So0157-2	12	12	1254432
strain	Ralstonia pickettii 12D	12	12	428406
strain	Xenorhabdus nematophila ATCC 19061	12	12	406817
strain	Streptomyces albus J1074	12	12	457425
strain	Proteus mirabilis HI4320	12	12	529507
strain	Streptococcus thermophilus LMD-9	12	12	322159
strain	Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305	12	12	342451
strain	Acinetobacter baumannii ZW85-1	12	12	1400867
strain	Mycobacterium smegmatis str. MC2 155	11	11	246196
strain	Burkholderia multivorans ATCC 17616	11	11	395019
strain	Gordonia polyisoprenivorans VH2	11	11	1112204
strain	Haemophilus influenzae PittGG	11	11	374931
strain	Blastococcus saxobsidens DD2	11	11	1146883
strain	Sinorhizobium medicae WSM419	11	11	366394
strain	Polaromonas naphthalenivorans CJ2	11	11	365044
strain	Rhodococcus erythropolis PR4	11	11	234621
strain	Azospirillum brasilense Sp245	11	11	1064539
strain	Neisseria meningitidis M01-240355	11	11	935588
strain	Acinetobacter baumannii AB307-0294	11	11	557600
strain	Nakamurella multipartita DSM 44233	11	11	479431
strain	Ralstonia eutropha H16	11	11	381666
strain	Azorhizobium caulinodans ORS 571	11	11	438753
strain	Mycobacterium vanbaalenii PYR-1	11	11	350058
strain	Pseudoxanthomonas suwonensis 11-1	11	11	743721
strain	Pasteurella multocida subsp. multocida str. Pm70	11	11	272843
strain	Bordetella petrii DSM 12804	11	11	340100
strain	Leuconostoc carnosum JB16	11	11	1229758
strain	Corynebacterium diphtheriae PW8	10	10	698964
strain	Pelagibacterium halotolerans B2	10	10	1082931
strain	Acidothermus cellulolyticus 11B	10	10	351607
strain	Mycoplasma pulmonis UAB CTIP	10	10	272635
strain	Tistrella mobilis KA081020-065	10	10	1110502
strain	Citrobacter koseri ATCC BAA-895	10	10	290338
strain	Streptosporangium roseum DSM 43021	10	10	479432
strain	Eubacterium eligens ATCC 27750	10	10	515620
strain	Pseudomonas aeruginosa NCGM2.S1	10	10	1089456
strain	Rickettsia africae ESF-5	10	10	347255
strain	Klebsiella pneumoniae JM45	10	10	1380908
strain	Rubrobacter xylanophilus DSM 9941	10	10	266117
strain	Escherichia coli KO11FL	10	10	595495
strain	Streptococcus anginosus C238	10	10	862971
strain	Enterobacter lignolyticus SCF1	10	10	701347
strain	Variovorax paradoxus S110	10	10	543728
strain	Sphaerochaeta pleomorpha str. Grapes	10	10	158190
strain	Thermoanaerobacter wiegelii Rt8.B1	10	10	697303
strain	Citrobacter rodentium ICC168	10	10	637910
strain	Salmonella enterica subsp. enterica serovar Agona	10	3	58095
strain	Clostridium difficile M68	10	10	699037
strain	Geobacillus thermoleovorans CCB_US3_UF5	10	10	1111068
strain	Serratia symbiotica str. 'Cinara cedri'	10	10	568817
strain	Burkholderia mallei NCTC 10247	10	10	320389
strain	Alistipes shahii WAL 8301	9	9	717959
strain	Rhodopseudomonas palustris BisB5	9	9	316057
strain	Catenulispora acidiphila DSM 44928	9	9	479433
strain	Enterobacter cloacae subsp. cloacae ATCC 13047	9	9	716541
strain	Corynebacterium urealyticum DSM 7111	9	9	1267754
strain	Borrelia valaisiana VS116	9	9	445987
strain	Lactobacillus helveticus R0052	9	9	880633
strain	Candidatus Rickettsia amblyommii str. GAT-30V	9	9	1105111
strain	Haemophilus influenzae F3031	9	9	866630
strain	Halomonas elongata DSM 2581	9	9	768066
strain	Pseudomonas aeruginosa MTB-1	9	9	1415629
strain	Thermosediminibacter oceani DSM 16646	9	9	555079
strain	Haemophilus influenzae R2846	9	9	262727
strain	Yersinia enterocolitica subsp. palearctica Y11	9	9	930944
strain	Desulfurispirillum indicum S5	9	9	653733
strain	Propionibacterium acnes TypeIA2 P.acn33	9	9	1114966
strain	Klebsiella pneumoniae 342	9	9	507522
strain	Sphaerochaeta coccoides DSM 17374	9	9	760011
strain	Solitalea canadensis DSM 3403	9	9	929556
strain	Gallibacterium anatis UMN179	9	9	1005058
strain	Haemophilus influenzae 10810	9	9	862964
strain	Nitrobacter winogradskyi Nb-255	9	9	323098
strain	Campylobacter hominis ATCC BAA-381	8	8	360107
strain	Acinetobacter baumannii 1656-2	8	8	696749
strain	Clostridiales genomosp. BVAB3 str. UPII9-5	8	8	699246
strain	Proteus mirabilis BB2000	8	8	1266738
strain	Alicycliphilus denitrificans K601	8	8	596154
strain	[Eubacterium] cylindroides T2-87	8	8	717960
strain	Rhodomicrobium vannielii ATCC 17100	8	8	648757
strain	Tsukamurella paurometabola DSM 20162	8	8	521096
strain	Rhodococcus pyridinivorans SB3094	8	8	1435356
strain	Corallococcus coralloides DSM 2259	8	8	1144275
strain	Pectobacterium carotovorum subsp. carotovorum PCC21	8	8	1218933
strain	Shewanella violacea DSS12	8	8	637905
strain	Ruminococcus torques L2-14	8	8	657313
strain	Cellulomonas fimi ATCC 484	8	8	590998
strain	Thermus scotoductus SA-01	8	8	743525
strain	Faecalibacterium prausnitzii SL3/3	8	8	657322
strain	Neisseria meningitidis WUE 2594	8	8	942513
strain	Gardnerella vaginalis 409-05	8	8	553190
strain	Acidovorax avenae subsp. avenae ATCC 19860	7	7	643561
strain	Pseudomonas aeruginosa B136-33	7	7	1280938
strain	Erysipelothrix rhusiopathiae str. Fujisawa	7	7	650150
strain	Streptomyces davawensis JCM 4913	7	7	1214101
strain	Parvibaculum lavamentivorans DS-1	7	7	402881
strain	Yersinia pseudotuberculosis IP 31758	7	7	349747
strain	Clavibacter michiganensis subsp. michiganensis NCPPB 382	7	7	443906
strain	Mesorhizobium opportunistum WSM2075	7	7	536019
strain	Saprospira grandis str. Lewin	7	7	984262
strain	Rhodococcus equi 103S	7	7	685727
strain	Marinobacter aquaeolei VT8	7	7	351348
strain	Escherichia coli ABU 83972	7	7	655817
strain	Megamonas hypermegale ART12/1	7	7	657316
strain	Flavobacterium branchiophilum FL-15	7	7	1034807
strain	Methanococcus voltae A3	7	7	456320
strain	Pseudomonas aeruginosa DK2	7	7	1093787
strain	Corynebacterium glutamicum SCgG2	7	7	1232383
strain	Serratia proteamaculans 568	7	7	399741
strain	Lactobacillus sakei subsp. sakei 23K	7	7	314315
strain	Bacillus cereus E33L	7	7	288681
strain	Ruminococcus albus 7	7	7	697329
strain	Rhodobacter sphaeroides ATCC 17025	7	7	349102
strain	Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)	7	7	572265
strain	Dickeya dadantii Ech703	7	7	579405
strain	Cellvibrio japonicus Ueda107	7	7	498211
strain	Belliella baltica DSM 15883	7	7	866536
strain	Haemophilus ducreyi 35000HP	7	7	233412
strain	Bifidobacterium thermophilum RBL67	7	7	1254439
strain	Gluconacetobacter diazotrophicus PAl 5	7	7	272568
strain	Actinoplanes missouriensis 431	7	7	512565
strain	Lactobacillus kefiranofaciens ZW3	7	7	1033837
strain	Mycoplasma ovis str. Michigan	7	7	1415773
strain	Pectobacterium atrosepticum SCRI1043	7	7	218491
strain	Bifidobacterium dentium Bd1	7	7	401473
strain	Mycoplasma genitalium M6282	7	7	662946
strain	Actinobacillus suis H91-0380	7	7	696748
strain	Thiomicrospira crunogena XCL-2	7	7	317025
strain	Pseudoxanthomonas spadix BD-a59	7	7	1045855
strain	Arcanobacterium haemolyticum DSM 20595	7	7	644284
strain	Buchnera aphidicola (Cinara tujafilina)	7	7	261317
strain	Opitutus terrae PB90-1	7	7	452637
strain	Saccharomonospora viridis DSM 43017	7	7	471857
strain	Streptococcus pneumoniae ATCC 700669	7	7	561276
strain	Nautilia profundicola AmH	7	7	598659
strain	Variovorax paradoxus B4	7	7	1246301
strain	Nocardia brasiliensis ATCC 700358	6	6	1133849
strain	Neisseria meningitidis alpha710	6	6	630588
strain	Vibrio campbellii ATCC BAA-1116	6	6	338187
strain	Xanthomonas campestris pv. raphani 756C	6	6	990315
strain	Burkholderia phymatum STM815	6	6	391038
strain	Phycisphaera mikurensis NBRC 102666	6	6	1142394
strain	Sphaerobacter thermophilus DSM 20745	6	6	479434
strain	Neisseria meningitidis Z2491	6	6	122587
strain	Streptococcus intermedius C270	6	6	862966
strain	Haemophilus influenzae Rd KW20	6	6	71421
strain	Campylobacter coli 76339	6	6	1367491
strain	Spirosoma linguale DSM 74	6	6	504472
strain	Cupriavidus taiwanensis LMG 19424	6	6	977880
strain	Pseudomonas aeruginosa UCBPP-PA14	6	6	208963
strain	Paracoccus denitrificans PD1222	6	6	318586
strain	Corynebacterium pseudotuberculosis 31	6	6	1087451
strain	Kineococcus radiotolerans SRS30216 = ATCC BAA-149	6	6	266940
strain	Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1	6	6	877468
strain	Cronobacter sakazakii SP291	6	6	956149
strain	Bacteriovorax marinus SJ	6	6	862908
strain	Chromobacterium violaceum ATCC 12472	6	6	243365
strain	Cardinium endosymbiont cEper1 of Encarsia pergandiella	6	6	1231626
strain	Klebsiella pneumoniae KCTC 2242	6	6	1049565
strain	Streptomyces avermitilis MA-4680 = NBRC 14893	6	6	227882
strain	Arthrobacter phenanthrenivorans Sphe3	6	6	930171
strain	Neisseria meningitidis M04-240196	6	6	935593
strain	Conexibacter woesei DSM 14684	6	6	469383
strain	Phaeobacter gallaeciensis DSM 26640	6	6	1423144
strain	Serratia plymuthica S13	6	6	1348660
strain	Propionibacterium acnes C1	6	6	1234380
strain	Streptomyces venezuelae ATCC 10712	6	6	953739
strain	Isoptericola variabilis 225	6	6	743718
strain	Burkholderia rhizoxinica HKI 454	6	6	882378
strain	Streptococcus suis D12	6	6	1004952
strain	Vibrio cholerae O395	6	6	345073
strain	Tolumonas auensis DSM 9187	6	6	595494
strain	Haliangium ochraceum DSM 14365	6	6	502025
strain	Acidaminococcus intestini RyC-MR95	6	6	568816
strain	Legionella longbeachae NSW150	6	6	661367
strain	Enterococcus casseliflavus EC20	6	6	565655
strain	Aerococcus urinae ACS-120-V-Col10a	6	6	866775
strain	Burkholderia ambifaria MC40-6	6	6	398577
strain	Helicobacter cetorum MIT 99-5656	5	5	1163745
strain	Rhizobium etli CFN 42	5	5	347834
strain	Methylomicrobium alcaliphilum 20Z	5	5	1091494
strain	Aeromonas veronii B565	5	5	998088
strain	Streptococcus suis 98HAH33	5	5	391296
strain	Taylorella equigenitalis ATCC 35865	5	5	743973
strain	Streptococcus thermophilus JIM 8232	5	5	1051074
strain	Candidatus Carsonella ruddii HC isolate Thao2000	5	5	1202538
strain	Lactobacillus reuteri DSM 20016	5	5	557436
strain	Propionibacterium acnes TypeIA2 P.acn17	5	5	1114967
strain	Streptomyces fulvissimus DSM 40593	5	5	1303692
strain	Mesorhizobium loti MAFF303099	5	5	266835
strain	Mycobacterium neoaurum VKM Ac-1815D	5	5	700508
strain	Anaerolinea thermophila UNI-1	5	5	926569
strain	Streptococcus anginosus C1051	5	5	862970
strain	Acidovorax citrulli AAC00-1	5	5	397945
strain	Bdellovibrio exovorus JSS	5	5	1184267
strain	Neisseria meningitidis 8013	5	5	604162
strain	Lactobacillus ruminis ATCC 27782	5	5	1069534
strain	Campylobacter curvus 525.92	5	5	360105
strain	Macrococcus caseolyticus JCSC5402	5	5	458233
strain	Escherichia coli HS	5	5	331112
strain	Exiguobacterium antarcticum B7	5	5	1087448
strain	Rhodopseudomonas palustris BisA53	5	5	316055
strain	Alicycliphilus denitrificans BC	5	5	596153
strain	Thermodesulfobacterium geofontis OPF15	5	5	795359
strain	Solibacillus silvestris StLB046	5	5	1002809
strain	Escherichia coli SE11	5	5	409438
strain	Gardnerella vaginalis HMP9231	5	5	1009464
strain	Psychromonas ingrahamii 37	5	5	357804
strain	Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony)	5	5	1142511
strain	Methylotenera versatilis 301	5	5	666681
strain	Mesorhizobium australicum WSM2073	5	5	754035
strain	Bifidobacterium adolescentis ATCC 15703	5	5	367928
strain	Rhodococcus jostii RHA1	5	5	101510
strain	Halorhodospira halophila SL1	5	5	349124
strain	Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67	5	5	321314
strain	Ralstonia eutropha JMP134	5	5	264198
strain	Aggregatibacter actinomycetemcomitans ANH9381	5	5	754507
strain	Candidatus Carsonella ruddii CE isolate Thao2000	5	5	1202536
strain	Mycobacterium chubuense NBB4	5	5	710421
strain	Mycoplasma cynos C142	5	5	1246955
strain	Natrialba magadii ATCC 43099	5	5	547559
strain	Candidatus Hodgkinia cicadicola Dsem	5	5	573234
strain	Candidatus Symbiobacter mobilis CR	5	5	946483
strain	Streptomyces rapamycinicus NRRL 5491	4	4	1343740
strain	Haemophilus parasuis SH0165	4	4	557723
strain	Saccharothrix espanaensis DSM 44229	4	4	1179773
strain	Salmonella enterica subsp. enterica serovar Agona str. SL483	4	4	454166
strain	Bacteroides salanitronis DSM 18170	4	4	667015
strain	Photobacterium profundum SS9	4	4	298386
strain	Fervidobacterium nodosum Rt17-B1	4	4	381764
strain	Staphylococcus aureus subsp. aureus MRSA252	4	4	282458
strain	Pectobacterium carotovorum subsp. carotovorum PC1	4	4	561230
strain	Deinococcus gobiensis I-0	4	4	745776
strain	Pseudonocardia dioxanivorans CB1190	4	4	675635
strain	Edwardsiella ictaluri 93-146	4	4	634503
strain	Flavobacterium johnsoniae UW101	4	4	376686
strain	Staphylococcus aureus subsp. aureus LGA251	4	4	985006
strain	Paracoccus aminophilus JCM 7686	4	4	1367847
strain	Paludibacter propionicigenes WB4	4	4	694427
strain	Burkholderia ambifaria AMMD	4	4	339670
strain	Acinetobacter baumannii MDR-ZJ06	4	4	497978
strain	Escherichia coli K-12	4	3	83333
strain	Treponema primitia ZAS-2	4	4	545694
strain	Leuconostoc kimchii IMSNU 11154	4	4	762051
strain	Blattabacterium sp. (Blattella germanica) str. Bge	4	4	331104
strain	Mycobacterium abscessus subsp. bolletii 50594	4	4	1303024
strain	Acinetobacter baumannii TCDC-AB0715	4	4	980514
strain	Actinobacillus pleuropneumoniae serovar 5b str. L20	4	4	416269
strain	Thermodesulfatator indicus DSM 15286	4	4	667014
strain	Oscillatoria acuminata PCC 6304	4	4	56110
strain	Pseudomonas putida F1	4	4	351746
strain	Desulfovibrio vulgaris str. 'Miyazaki F'	4	4	883
strain	Caldilinea aerophila DSM 14535 = NBRC 104270	4	4	926550
strain	Erwinia pyrifoliae DSM 12163	4	4	644651
strain	Klebsiella variicola At-22	4	4	640131
strain	Thermoanaerobacterium saccharolyticum JW/SL-YS485	4	4	1094508
strain	Frankia alni ACN14a	4	4	326424
strain	Cronobacter sakazakii CMCC 45402	4	4	1401659
strain	Escherichia coli O55:H7 str. CB9615	4	4	701177
strain	Klebsiella oxytoca E718	4	4	1191061
strain	Bacillus licheniformis DSM 13 = ATCC 14580	4	4	279010
strain	Bacteroides fragilis 638R	4	4	862962
strain	Isosphaera pallida ATCC 43644	4	4	575540
strain	Streptococcus pneumoniae Hungary19A-6	4	4	487214
strain	Candidatus Tremblaya phenacola PAVE	4	4	1266371
strain	Caulobacter segnis ATCC 21756	4	4	509190
strain	Halorhabdus utahensis DSM 12940	4	4	519442
strain	Thiobacillus denitrificans ATCC 25259	4	4	292415
strain	Neisseria meningitidis 053442	4	4	374833
strain	Runella slithyformis DSM 19594	4	4	761193
strain	Burkholderia xenovorans LB400	4	4	266265
strain	Stackebrandtia nassauensis DSM 44728	4	4	446470
strain	Methylococcus capsulatus str. Bath	4	4	243233
strain	Rhodospirillum centenum SW	4	4	414684
strain	Hyphomicrobium denitrificans ATCC 51888	4	4	582899
strain	Xanthomonas oryzae pv. oryzae	4	4	64187
strain	Bacteroides fragilis YCH46	4	4	295405
strain	Aeromonas salmonicida subsp. salmonicida A449	4	4	382245
strain	Corynebacterium terpenotabidum Y-11	4	4	1200352
strain	Desulfarculus baarsii DSM 2075	4	4	644282
strain	Saccharophagus degradans 2-40	4	4	203122
strain	Neisseria meningitidis FAM18	4	4	272831
strain	Staphylococcus aureus 08BA02176	4	4	1229492
strain	Nocardia cyriacigeorgica GUH-2	4	4	1127134
strain	Desulfovibrio alaskensis G20	4	4	207559
strain	Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594	4	4	476213
strain	Halanaerobium praevalens DSM 2228	4	4	572479
strain	Klebsiella oxytoca KCTC 1686	4	4	1006551
strain	Variovorax paradoxus EPS	4	4	595537
strain	Helicobacter bizzozeronii CIII-1	4	4	1002804
strain	Leuconostoc citreum KM20	4	4	349519
strain	Beutenbergia cavernae DSM 12333	4	4	471853
strain	Candidatus Sulcia muelleri SMDSEM	4	4	595499
strain	Salinispora arenicola CNS-205	4	4	391037
strain	Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis	4	4	36870
strain	Desulfotomaculum acetoxidans DSM 771	4	4	485916
strain	Rhodopseudomonas palustris TIE-1	4	4	395960
strain	Staphylococcus aureus M1	4	4	1305598
strain	Streptomyces collinus Tu 365	4	4	1214242
strain	Acinetobacter baumannii MDR-TJ	4	4	889738
strain	Brachyspira murdochii DSM 12563	4	4	526224
strain	Coxiella burnetii CbuK_Q154	4	4	434924
strain	Candidatus Portiera aleyrodidarum TV	4	4	1297582
strain	Leifsonia xyli subsp. xyli str. CTCB07	3	3	281090
strain	Burkholderia thailandensis MSMB121	3	3	1249661
strain	Burkholderia cenocepacia MC0-3	3	3	406425
strain	Alcanivorax dieselolei B5	3	3	930169
strain	Caldicellulosiruptor saccharolyticus DSM 8903	3	3	351627
strain	Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111	3	3	446468
strain	Polynucleobacter necessarius subsp. necessarius STIR1	3	3	452638
strain	Rhodopseudomonas palustris HaA2	3	3	316058
strain	Streptomyces griseus subsp. griseus NBRC 13350	3	3	455632
strain	Parvularcula bermudensis HTCC2503	3	3	314260
strain	Arthrobacter chlorophenolicus A6	3	3	452863
strain	Burkholderia thailandensis E264	3	3	271848
strain	Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821	3	3	264203
strain	Lactobacillus plantarum subsp. plantarum P-8	3	3	767468
strain	Bacillus amyloliquefaciens subsp. plantarum AS43.3	3	3	1225788
strain	Paenibacillus mucilaginosus 3016	3	3	1116391
strain	Haemophilus parasuis ZJ0906	3	3	1322346
strain	Salmonella enterica subsp. enterica serovar Enteritidis str. P125109	3	3	550537
strain	Streptococcus thermophilus CNRZ1066	3	3	299768
strain	[Cellvibrio] gilvus ATCC 13127	3	3	593907
strain	Desulfobulbus propionicus DSM 2032	3	3	577650
strain	Spiribacter salinus M19-40	3	3	1260251
strain	Salmonella enterica subsp. enterica serovar Cubana str. CFSAN002050	3	3	1271863
strain	Xenorhabdus bovienii SS-2004	3	3	406818
strain	Syntrophus aciditrophicus SB	3	3	56780
strain	Lactobacillus casei str. Zhang	3	3	498216
strain	Rhodospirillum photometricum DSM 122	3	3	1150469
strain	Salinispora tropica CNB-440	3	3	369723
strain	Xylanimonas cellulosilytica DSM 15894	3	3	446471
strain	Phaeobacter inhibens DSM 17395	3	3	391619
strain	Mycoplasma hyopneumoniae 168	3	1	907287
strain	Candidatus Accumulibacter phosphatis clade IIA str. UW-1	3	3	522306
strain	Calothrix sp. PCC 6303	3	3	1170562
strain	Salmonella enterica subsp. enterica serovar Heidelberg str. B182	3	3	1160717
strain	Acinetobacter baumannii BJAB0868	3	3	1096997
strain	Borrelia recurrentis A1	3	3	412418
strain	Pseudomonas putida S16	3	3	1042876
strain	Methanobrevibacter ruminantium M1	3	3	634498
strain	Hyphomonas neptunium ATCC 15444	3	3	228405
strain	Heliobacterium modesticaldum Ice1	3	3	498761
strain	Alkalilimnicola ehrlichii MLHE-1	3	3	187272
strain	Yersinia pestis biovar Medievalis str. Harbin 35	3	3	547048
strain	Escherichia coli O127:H6 str. E2348/69	3	3	574521
strain	Escherichia coli APEC O1	3	3	405955
strain	Methanolobus psychrophilus R15	3	3	1094980
strain	Psychroflexus torquis ATCC 700755	3	3	313595
strain	Salmonella enterica subsp. enterica serovar Agona str. 24249	3	3	1406860
strain	Enterobacter cloacae subsp. dissolvens SDM	3	3	1104326
strain	Glaciecola nitratireducens FR1064	3	3	1085623
strain	Mannheimia haemolytica D171	3	3	1311759
strain	Streptococcus pasteurianus ATCC 43144	3	3	981540
strain	Microlunatus phosphovorus NM-1	3	3	1032480
strain	Vibrio vulnificus CMCP6	3	3	216895
strain	Corynebacterium urealyticum DSM 7109	3	3	504474
strain	Cytophaga hutchinsonii ATCC 33406	3	3	269798
strain	Staphylococcus aureus subsp. aureus MSSA476	3	3	282459
strain	Albidiferax ferrireducens T118	3	3	338969
strain	Klebsiella pneumoniae subsp. pneumoniae HS11286	3	3	1125630
strain	Influenza A virus (A/Korea/426/1968(H2N2))	3	3	488241
strain	Nocardia farcinica IFM 10152	3	3	247156
strain	Natronococcus occultus SP4	3	3	694430
strain	Dechloromonas aromatica RCB	3	3	159087
strain	Actinosynnema mirum DSM 43827	3	3	446462
strain	Rhodopseudomonas palustris DX-1	3	3	652103
strain	Hyphomicrobium nitrativorans NL23	3	3	1029756
strain	Gallionella capsiferriformans ES-2	3	3	395494
strain	Thermoanaerobacter tengcongensis MB4	3	3	273068
strain	Lactococcus lactis subsp. lactis CV56	3	3	929102
strain	Halovivax ruber XH-70	3	3	797302
strain	Pandoraea pnomenusa 3kgm	3	3	1416914
strain	Salmonella enterica subsp. enterica serovar Typhi str. CT18	3	3	220341
strain	Actinobacillus pleuropneumoniae serovar 7 str. AP76	3	3	537457
strain	Streptococcus dysgalactiae subsp. equisimilis RE378	3	3	617121
strain	Thalassolituus oleivorans MIL-1	3	3	1298593
strain	Borrelia duttonii Ly	3	3	412419
strain	Asticcacaulis excentricus CB 48	3	3	573065
strain	Myxococcus xanthus DK 1622	3	3	246197
strain	Actinoplanes friuliensis DSM 7358	3	3	1246995
strain	Magnetospirillum gryphiswaldense MSR-1 v2	3	3	1430440
strain	Parachlamydia acanthamoebae UV-7	3	3	765952
strain	Streptococcus intermedius JTH08	3	3	591365
strain	Candidatus Liberibacter americanus str. Sao Paulo	3	3	1261131
strain	Exiguobacterium sibiricum 255-15	2	2	262543
strain	Staphylococcus carnosus subsp. carnosus TM300	2	2	396513
strain	Bifidobacterium asteroides PRL2011	2	2	1147128
strain	Anaeromyxobacter dehalogenans 2CP-C	2	2	290397
strain	Xanthomonas campestris pv. campestris str. B100	2	2	509169
strain	Teredinibacter turnerae T7901	2	2	377629
strain	Enterococcus mundtii QU 25	2	2	1300150
strain	Thermoanaerobacter mathranii subsp. mathranii str. A3	2	2	583358
strain	Elusimicrobium minutum Pei191	2	2	445932
strain	Shewanella putrefaciens 200	2	2	399804
strain	Frateuria aurantia DSM 6220	2	2	767434
strain	Serratia liquefaciens ATCC 27592	2	2	1346614
strain	Oscillatoria nigro-viridis PCC 7112	2	2	179408
strain	Pseudomonas aeruginosa M18	2	2	941193
strain	Eubacterium siraeum V10Sc8a	2	2	717961
strain	Acidithiobacillus ferrivorans SS3	2	2	743299
strain	Verrucosispora maris AB-18-032	2	2	263358
strain	Streptococcus macedonicus ACA-DC 198	2	2	1116231
strain	Marinithermus hydrothermalis DSM 14884	2	2	869210
strain	Escherichia coli P12b	2	2	910348
strain	Pseudomonas aeruginosa PAO1	2	2	208964
strain	Escherichia coli ETEC H10407	2	2	316401
strain	Bacteroides thetaiotaomicron VPI-5482	2	2	226186
strain	Lactobacillus reuteri SD2112	2	2	491077
strain	Campylobacter sp. 03-427	2	2	1244528
strain	Mycobacterium rhodesiae NBB3	2	2	710685
strain	Mycoplasma conjunctivae HRC/581	2	2	572263
strain	Streptococcus equi subsp. equi 4047	2	2	553482
strain	Salmonella enterica subsp. enterica serovar Typhimurium str. D23580	2	2	568708
strain	Roseburia intestinalis XB6B4	2	2	718255
strain	Trichodesmium erythraeum IMS101	2	2	203124
strain	Niastella koreensis GR20-10	2	2	700598
strain	Roseobacter litoralis Och 149	2	2	391595
strain	Streptococcus agalactiae NEM316	2	2	211110
strain	Candidatus Zinderia insecticola CARI	2	2	871271
strain	Pseudomonas aeruginosa RP73	2	2	1340851
strain	Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1	2	2	312153
strain	Caulobacter crescentus CB15	2	2	190650
strain	Advenella kashmirensis WT001	2	2	1036672
strain	Azospirillum lipoferum 4B	2	2	862719
strain	Ruminococcus champanellensis 18P13	2	2	213810
strain	Methanococcus aeolicus Nankai-3	2	2	419665
strain	Methanomethylovorans hollandica DSM 15978	2	2	867904
strain	Leptospira biflexa serovar Patoc	2	2	145259
strain	Thiocystis violascens DSM 198	2	2	765911
strain	Methanosarcina barkeri str. Fusaro	2	2	269797
strain	Mycobacterium tuberculosis CAS/NITR204	2	2	1310114
strain	Methylobacillus flagellatus KT	2	2	265072
strain	Enterococcus faecalis str. Symbioflor 1	2	2	1261557
strain	Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)	2	2	713602
strain	Streptococcus infantarius subsp. infantarius CJ18	2	2	1069533
strain	Desulfotalea psychrophila LSv54	2	2	177439
strain	Clavibacter michiganensis subsp. nebraskensis NCPPB 2581	2	2	1097677
strain	Shewanella baltica OS117	2	2	693970
strain	Rhizobium etli bv. mimosae str. Mim1	2	2	1328306
strain	Escherichia coli SE15	2	2	431946
strain	Pedobacter saltans DSM 12145	2	2	762903
strain	Bordetella avium 197N	2	2	360910
strain	Clostridium acidurici 9a	2	2	1128398
strain	Pasteurella multocida 36950	2	2	1075089
strain	Ehrlichia chaffeensis str. Arkansas	2	2	205920
strain	Aeromonas hydrophila subsp. hydrophila ATCC 7966	2	2	380703
strain	Bifidobacterium longum subsp. longum JDM301	2	2	759350
strain	Candidatus Carsonella ruddii DC	2	2	667013
strain	Streptomyces flavogriseus ATCC 33331	2	2	591167
strain	Helicobacter pylori B38	2	2	592205
strain	Legionella pneumophila subsp. pneumophila str. Philadelphia 1	2	2	272624
strain	Roseburia hominis A2-183	2	2	585394
strain	Streptomyces violaceusniger Tu 4113	2	2	653045
strain	Rhodopseudomonas palustris CGA009	2	2	258594
strain	Thermobifida fusca YX	2	2	269800
strain	Escherichia coli JJ1886	2	2	1355100
strain	Escherichia coli O7:K1 str. CE10	2	2	1072459
strain	Mahella australiensis 50-1 BON	2	2	697281
strain	Propionibacterium acnes TypeIA2 P.acn31	2	2	1114969
strain	Anoxybacillus flavithermus WK1	2	2	491915
strain	Kangiella koreensis DSM 16069	2	2	523791
strain	Leisingera methylohalidivorans DSM 14336	2	2	999552
strain	Riemerella anatipestifer RA-CH-2	2	2	1271752
strain	Dickeya dadantii 3937	2	2	198628
strain	Porphyromonas gingivalis TDC60	2	2	1030843
strain	Aromatoleum aromaticum EbN1	2	2	76114
strain	Eubacterium rectale DSM 17629	2	2	657318
strain	Enterobacteria phage T4	2	2	10665
strain	Escherichia coli DH1	2	2	536056
strain	Bacteroides fragilis NCTC 9343	2	2	272559
strain	Streptococcus suis BM407	2	2	568814
strain	Gluconobacter oxydans 621H	2	2	290633
strain	Staphylococcus aureus subsp. aureus ST228	2	2	1074919
strain	Dinoroseobacter shibae DFL 12 = DSM 16493	2	2	398580
strain	Rahnella aquatilis HX2	2	2	1151116
strain	Granulibacter bethesdensis CGDNIH1	2	2	391165
strain	Mannheimia haemolytica USDA-ARS-USMARC-185	2	2	1249526
strain	Desulfococcus oleovorans Hxd3	2	2	96561
strain	Pelobacter carbinolicus DSM 2380	2	2	338963
strain	Streptococcus suis D9	2	2	1005042
strain	Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1	2	2	990282
strain	Corynebacterium diphtheriae INCA 402	2	2	698972
strain	Escherichia coli W	2	2	566546
strain	Faecalibacterium prausnitzii L2-6	2	2	718252
strain	Burkholderia vietnamiensis G4	2	2	269482
strain	Clostridium perfringens SM101	2	2	289380
strain	Microcystis aeruginosa NIES-843	2	2	449447
strain	Candidatus Blochmannia vafer str. BVAF	2	2	859654
strain	Mycoplasma hyopneumoniae 168-L	2	2	1116211
strain	Clostridium cf. saccharolyticum K10	2	2	717608
strain	Corynebacterium ulcerans 0102	2	2	996634
strain	Streptococcus pneumoniae AP200	2	2	574093
strain	Staphylococcus aureus subsp. aureus 71193	2	2	1155084
strain	Streptococcus pneumoniae SPNA45	2	2	869309
strain	Shewanella denitrificans OS217	2	2	318161
strain	Staphylococcus aureus subsp. aureus HO 5096 0412	2	2	1074252
strain	Haloferax volcanii DS2	2	2	309800
strain	Arthrobacter aurescens TC1	2	2	290340
strain	Bacillus coagulans 36D1	2	2	345219
strain	Mycobacterium avium 104	2	2	243243
strain	Dyadobacter fermentans DSM 18053	2	2	471854
strain	Xanthomonas albilineans GPE PC73	2	2	380358
strain	Staphylococcus aureus subsp. aureus CN1	2	2	1193576
strain	Erwinia pyrifoliae Ep1/96	2	2	634499
strain	Melioribacter roseus P3M-2	2	2	1191523
strain	Thermus thermophilus SG0.5JP17-16	2	2	762633
strain	Human herpesvirus 4 type 2	2	2	12509
strain	Blattabacterium sp. (Mastotermes darwiniensis) str. MADAR	2	2	1074889
strain	Corynebacterium diphtheriae NCTC 13129	2	2	257309
strain	Lactobacillus acidophilus NCFM	2	2	272621
strain	Ralstonia solanacearum GMI1000	2	2	267608
strain	Acetohalobium arabaticum DSM 5501	2	2	574087
strain	Staphylococcus aureus subsp. aureus USA300_FPR3757	2	2	451515
strain	Streptomyces scabiei 87.22	2	2	680198
strain	Meiothermus ruber DSM 1279	2	2	504728
strain	Deinococcus radiodurans R1	2	2	243230
strain	Acinetobacter baumannii ACICU	2	2	405416
strain	Mycoplasma hyorhinis SK76	2	2	1118964
strain	Kitasatospora setae KM-6054	2	2	452652
strain	Streptococcus uberis 0140J	2	2	218495
strain	Streptococcus mutans LJ23	2	2	1155071
strain	Bacteroides xylanisolvens XB1A	2	2	657309
strain	Lactococcus lactis subsp. cremoris A76	2	2	1104322
strain	Bacillus subtilis BSn5	2	2	936156
strain	Sodalis glossinidius str. 'morsitans'	2	2	343509
strain	Burkholderia phenoliruptrix BR3459a	2	2	1229205
strain	Neisseria gonorrhoeae FA 1090	2	2	242231
strain	Streptococcus pneumoniae TCH8431/19A	2	2	525381
strain	Legionella pneumophila str. Paris	2	2	297246
strain	Clostridium difficile 630	2	2	272563
strain	Enterobacter aerogenes EA1509E	2	2	935296
strain	Escherichia coli O104:H4 str. 2009EL-2050	2	2	1134782
strain	Campylobacter lari RM2100	2	2	306263
strain	Corynebacterium glutamicum ATCC 13032	2	2	196627
strain	Desulfotomaculum ruminis DSM 2154	2	2	696281
strain	Pyrolobus fumarii 1A	2	2	694429
strain	Rhodobacter capsulatus SB 1003	1	1	272942
strain	Streptomyces bingchenggensis BCW-1	1	1	749414
strain	Candidatus Sulcia muelleri GWSS	1	1	444179
strain	Mycoplasma gallisepticum str. F	1	1	708616
strain	Mycoplasma suis KI3806	1	1	708248
strain	Ralstonia solanacearum CMR15	1	1	859655
strain	Shewanella oneidensis MR-1	1	1	211586
strain	Syntrophothermus lipocalidus DSM 12680	1	1	643648
strain	Ferrimonas balearica DSM 9799	1	1	550540
strain	Shigella flexneri 5 str. 8401	1	1	373384
strain	Candidatus Desulforudis audaxviator MP104C	1	1	477974
strain	Corynebacterium diphtheriae BH8	1	1	698973
strain	Coriobacterium glomerans PW2	1	1	700015
strain	Sideroxydans lithotrophicus ES-1	1	1	580332
strain	Spiroplasma diminutum CUAS-1	1	1	1276221
strain	Buchnera aphidicola str. Sg (Schizaphis graminum)	1	1	198804
strain	Calditerrivibrio nitroreducens DSM 19672	1	1	768670
strain	Pantoea ananatis LMG 20103	1	1	706191
strain	Lactococcus lactis subsp. cremoris UC509.9	1	1	1111678
strain	Streptococcus mutans NN2025	1	1	511691
strain	Burkholderia glumae BGR1	1	1	626418
strain	Maricaulis maris MCS10	1	1	394221
strain	Singulisphaera acidiphila DSM 18658	1	1	886293
strain	Coprococcus catus GD/7	1	1	717962
strain	Paenibacillus polymyxa E681	1	1	349520
strain	Candidatus Puniceispirillum marinum IMCC1322	1	1	488538
strain	Marinobacter hydrocarbonoclasticus ATCC 49840	1	1	1163748
strain	Vibrio cholerae LMA3984-4	1	1	935297
strain	Candidatus Endolissoclinum faulkneri L2	1	1	1193729
strain	Aggregatibacter actinomycetemcomitans D7S-1	1	1	694569
strain	Herpetosiphon aurantiacus DSM 785	1	1	316274
strain	Klebsiella pneumoniae CG43	1	1	1244085
strain	Sulfolobus tokodaii str. 7	1	1	273063
strain	Simiduia agarivorans SA1 = DSM 21679	1	1	1117647
strain	Listonella anguillarum serovar O1	1	1	42323
strain	Thermaerobacter marianensis DSM 12885	1	1	644966
strain	Desulfomonile tiedjei DSM 6799	1	1	706587
strain	Natronomonas moolapensis 8.8.11	1	1	268739
strain	Sinorhizobium meliloti AK83	1	1	693982
strain	Lactobacillus plantarum 16	1	1	1327988
strain	Bacillus amyloliquefaciens LFB112	1	1	1415165
strain	Methylomonas methanica MC09	1	1	857087
strain	Shigella flexneri 2002017	1	1	591020
strain	Riemerella anatipestifer RA-CH-1	1	1	1228997
strain	Pelodictyon phaeoclathratiforme BU-1	1	1	324925
strain	Staphylococcus aureus RF122	1	1	273036
strain	Staphylococcus aureus subsp. aureus JKD6159	1	1	869816
strain	Pyrobaculum aerophilum str. IM2	1	1	178306
strain	Pectobacterium wasabiae WPP163	1	1	561231
strain	Streptococcus suis ST1	1	1	1004951
strain	Porphyromonas gingivalis ATCC 33277	1	1	431947
strain	Desulfitobacterium dichloroeliminans LMG P-21439	1	1	871963
strain	Weeksella virosa DSM 16922	1	1	865938
strain	Bacillus atrophaeus 1942	1	1	720555
strain	Ralstonia solanacearum Po82	1	1	1031711
strain	Geobacter metallireducens GS-15	1	1	269799
strain	Shigella dysenteriae Sd197	1	1	300267
strain	Desulfovibrio gigas DSM 1382 = ATCC 19364	1	1	1121448
strain	Haemophilus somnus 2336	1	1	228400
strain	Rahnella aquatilis CIP 78.65 = ATCC 33071	1	1	745277
strain	Bifidobacterium bifidum PRL2010	1	1	702459
strain	Deinococcus deserti VCD115	1	1	546414
strain	Thermacetogenium phaeum DSM 12270	1	1	1089553
strain	Eubacterium rectale ATCC 33656	1	1	515619
strain	Streptococcus pneumoniae 70585	1	1	488221
strain	Bacillus halodurans C-125	1	1	272558
strain	Escherichia coli O111:H- str. 11128	1	1	585396
strain	Flexistipes sinusarabici DSM 4947	1	1	717231
strain	Cyanobium gracile PCC 6307	1	1	292564
strain	Enterococcus faecium Aus0085	1	1	1305849
strain	Xylella fastidiosa M12	1	1	405440
strain	Streptococcus pneumoniae gamPNI0373	1	1	697283
strain	Escherichia coli 536	1	1	362663
strain	Caldicellulosiruptor bescii DSM 6725	1	1	521460
strain	Pantoea ananatis AJ13355	1	1	932677
strain	Escherichia coli O55:H7 str. RM12579	1	1	1048689
strain	Methylocella silvestris BL2	1	1	395965
strain	Thermoanaerobacter italicus Ab9	1	1	580331
strain	Enterococcus faecalis 62	1	1	936153
strain	Pleurocapsa sp. PCC 7327	1	1	118163
strain	Meiothermus silvanus DSM 9946	1	1	526227
strain	Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921	1	1	1271862
strain	Clostridium phytofermentans ISDg	1	1	357809
strain	Streptococcus agalactiae GD201008-001	1	1	1203670
strain	Ureaplasma parvum serovar 3	1	1	38504
strain	Allochromatium vinosum DSM 180	1	1	572477
strain	Acidimicrobium ferrooxidans DSM 10331	1	1	525909
strain	Clostridium lentocellum DSM 5427	1	1	642492
strain	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	1	1	272620
strain	Acidobacterium capsulatum ATCC 51196	1	1	240015
strain	Vibrio splendidus LGP32	1	1	575788
strain	Rhodopirellula baltica SH 1	1	1	243090
strain	Carboxydothermus hydrogenoformans Z-2901	1	1	246194
strain	Chamaesiphon minutus PCC 6605	1	1	1173020
strain	Lactobacillus buchneri NRRL B-30929	1	1	511437
strain	Mycoplasma gallisepticum str. R	1	1	233150
strain	Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774	1	1	525146
strain	Oenococcus oeni PSU-1	1	1	203123
strain	Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633	1	1	439843
strain	Candidatus Sulcia muelleri CARI	1	1	706194
strain	Salmonella enterica subsp. enterica serovar Typhimurium str. 798	1	1	1008297
strain	Bifidobacterium longum DJO10A	1	1	205913
strain	Candidatus Kinetoplastibacterium oncopeltii TCC290E	1	1	1208920
strain	Lactobacillus paracasei subsp. paracasei 8700:2	1	1	537973
strain	Hirschia baltica ATCC 49814	1	1	582402
strain	Streptococcus pyogenes MGAS15252	1	1	798300
strain	Methanosaeta harundinacea 6Ac	1	1	1110509
strain	Escherichia coli UMNK88	1	1	696406
strain	Truepera radiovictrix DSM 17093	1	1	649638
strain	Anaerobaculum mobile DSM 13181	1	1	891968
strain	Eubacterium limosum KIST612	1	1	903814
strain	Thioalkalivibrio nitratireducens DSM 14787	1	1	1255043
strain	Thermus thermophilus JL-18	1	1	798128
strain	Lactococcus lactis subsp. cremoris KW2	1	1	1295826
strain	Erwinia tasmaniensis Et1/99	1	1	465817
strain	Chlorobium phaeobacteroides DSM 266	1	1	290317
strain	Alteromonas macleodii str. 'Ionian Sea UM4b'	1	1	1300259
strain	Geobacter uraniireducens Rf4	1	1	351605
strain	Methanococcus maripaludis C6	1	1	444158
strain	Lactococcus lactis subsp. cremoris SK11	1	1	272622
strain	Vibrio cholerae O1 str. 2010EL-1786	1	1	914149
strain	Pirellula staleyi DSM 6068	1	1	530564
strain	Bordetella bronchiseptica MO149	1	1	1208658
strain	Photorhabdus luminescens subsp. laumondii TTO1	1	1	243265
strain	Aquifex aeolicus VF5	1	1	224324
strain	Weissella koreensis KACC 15510	1	1	1045854
strain	Mycoplasma leachii PG50	1	1	880447
strain	Amphibacillus xylanus NBRC 15112	1	1	698758
strain	Bacillus cellulosilyticus DSM 2522	1	1	649639
strain	Enterococcus faecium DO	1	1	333849
strain	Escherichia coli O104:H4 str. 2009EL-2071	1	1	1133853
strain	Ralstonia solanacearum CFBP2957	1	1	859656
strain	Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088	1	1	391904
strain	Candidatus Nasuia deltocephalinicola str. NAS-ALF	1	1	1343077
strain	Cupriavidus necator N-1	1	1	1042878
strain	Deinococcus peraridilitoris DSM 19664	1	1	937777
strain	Bacillus thuringiensis Bt407	1	1	527021
strain	Escherichia coli Xuzhou21	1	1	741093
strain	Escherichia coli str. K-12 substr. W3110	1	1	316407
strain	Thioflavicoccus mobilis 8321	1	1	765912
strain	Desulfovibrio africanus str. Walvis Bay	1	1	690850
strain	Nostoc punctiforme PCC 73102	1	1	63737
strain	Corynebacterium glutamicum R	1	1	340322
strain	Mannheimia haemolytica M42548	1	1	1316932
strain	Clostridium botulinum Ba4 str. 657	1	1	515621
strain	Methanobrevibacter smithii ATCC 35061	1	1	420247
strain	Gluconobacter oxydans H24	1	1	1224746
strain	Staphylococcus aureus Bmb9393	1	1	1321369
strain	Desulfobacula toluolica Tol2	1	1	651182
strain	Candidatus Midichloria mitochondrii IricVA	1	1	696127
strain	Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601	1	1	554290
strain	Yersinia enterocolitica subsp. palearctica 105.5R(r)	1	1	994476
strain	Geobacillus thermoglucosidasius C56-YS93	1	1	634956
strain	Mycobacterium gilvum PYR-GCK	1	1	350054
strain	Shigella sonnei 53G	1	1	216599
strain	Vibrio cholerae M66-2	1	1	579112
strain	Sinorhizobium meliloti GR4	1	1	1235461
no rank	cellular organisms	1358233	282	131567
no rank	ssDNA viruses	34620	0	29258
no rank	dsDNA viruses, no RNA stage	8335	3	35237
no rank	unclassified Betabaculovirus	7266	0	342107
no rank	ssRNA viruses	4277	0	439488
no rank	ssRNA positive-strand viruses, no DNA stage	2974	0	35278
no rank	unclassified Micrococcineae	1345	0	577468
no rank	ssRNA negative-strand viruses	1303	0	35301
no rank	Clostridiales incertae sedis	528	0	538999
no rank	Bacillales incertae sedis	501	0	539002
no rank	unclassified Bacteria	285	0	2323
no rank	unclassified Burkholderiales	154	0	119065
no rank	unclassified Gammaproteobacteria	59	0	118884
no rank	unclassified Alphaproteobacteria	37	0	82117
no rank	unclassified dsDNA viruses	25	0	51368
no rank	sulfur-oxidizing symbionts	22	22	32036
no rank	Candidatus Baumannia	20	0	198346
no rank	unclassified Betaproteobacteria	19	0	119066
no rank	unclassified Siphoviridae	17	0	196894
no rank	unclassified Clostridiales	13	0	186813
no rank	unclassified Bacteroidetes	6	0	171558
no rank	unclassified Rhizobiales	5	0	119042
no rank	Halothece cluster	3	0	92682
no rank	unassigned Betaherpesvirinae	2	0	686603
no rank	Enterobacteria phage G4 clade	2	0	374842
no rank	unclassified Lambda-like viruses	2	0	335795
no rank	unclassified Ascovirus	2	0	328613
no rank	unclassified Bacteria (miscellaneous)	2	0	49928
no rank	candidate division SR1	2	0	221235
no rank	unclassified Myoviridae	2	0	196896
no rank	Alteromonadales genera incertae sedis	2	0	256005
no rank	unclassified Betaproteobacteria (miscellaneous)	2	0	33809
no rank	Thermobaculum terrenum ATCC BAA-798	1	1	525904
no rank	unclassified Deltaproteobacteria	1	0	45456
no rank	SAR116 cluster	1	0	62654
unclassified	unclassified	1869550	1869550	0
