LEVEL	TAXA	ROLLUP	ASSIGNED	TAXID
	Actinobacteridae	885	0	85003
	Coriobacterineae	25	0	255727
	Methanobacterium sp. AL-21	7	7	868132
	Mobiluncus/Falcivibrio group	3	0	279916
	Actinomycineae	3	0	85005
	Albidiferax	1	0	885497
	Clostridiales genomosp. BVAB3	1	0	699245
root	root	1044132	10038	1
superkingdom	Bacteria	961427	1432	2
superkingdom	Viruses	71052	0	10239
superkingdom	Archaea	1325	0	2157
superphylum	Bacteroidetes/Chlorobi group	704	0	68336
superphylum	Chlamydiae/Verrucomicrobia group	14	0	51290
superphylum	Fibrobacteres/Acidobacteria group	2	0	131550
phylum	Proteobacteria	949330	2127	1224
phylum	Firmicutes	6215	33	1239
phylum	Tenericutes	2298	0	544448
phylum	Euryarchaeota	1176	3	28890
phylum	Actinobacteria	913	0	201174
phylum	Bacteroidetes	702	1	976
phylum	Spirochaetes	271	0	203691
phylum	Crenarchaeota	149	0	28889
phylum	Cyanobacteria	117	2	1117
phylum	Fusobacteria	110	0	32066
phylum	Chlamydiae	14	0	204428
phylum	Thermotogae	8	0	200918
phylum	Thermodesulfobacteria	7	0	200940
phylum	Candidatus Saccharibacteria	2	2	95818
phylum	Acidobacteria	2	0	57723
phylum	Chrysiogenetes	1	0	200938
phylum	Ignavibacteriae	1	0	1134404
phylum	Nitrospirae	1	0	40117
phylum	Planctomycetes	1	0	203682
phylum	Deinococcus-Thermus	1	0	1297
phylum	Chlorobi	1	0	1090
subphylum	delta/epsilon subdivisions	1001	0	68525
class	Betaproteobacteria	935689	56	28216
class	Gammaproteobacteria	10117	180	1236
class	Bacilli	6020	16	91061
class	Mollicutes	2298	0	31969
class	Halobacteria	1117	0	183963
class	Actinobacteria	913	3	1760
class	Epsilonproteobacteria	700	0	29547
class	Bacteroidia	668	0	200643
class	Alphaproteobacteria	396	0	28211
class	Deltaproteobacteria	301	0	28221
class	Spirochaetia	271	0	203692
class	Thermoprotei	149	0	183924
class	Fusobacteriia	110	0	203490
class	Clostridia	91	1	186801
class	Negativicutes	71	0	909932
class	Flavobacteriia	30	0	117743
class	Methanobacteria	29	0	183925
class	Coriobacteridae	25	0	84998
class	Methanomicrobia	20	0	224756
class	Chlamydiia	14	0	204429
class	Thermotogae	8	0	188708
class	Thermodesulfobacteria	7	0	67799
class	Methanococci	7	0	183939
class	Acidobacteriia	2	0	204432
class	Sphingobacteriia	1	0	117747
class	Chrysiogenetes	1	0	118001
class	Nitrospira	1	0	203693
class	Chlorobia	1	0	191410
class	Deinococci	1	0	188787
class	Ignavibacteria	1	0	795747
class	Cytophagia	1	0	768503
class	Phycisphaerae	1	0	666505
subclass	Oscillatoriophycideae	67	0	1301283
order	Burkholderiales	934947	27	80840
order	Lactobacillales	4416	18	186826
order	Pseudomonadales	3690	0	72274
order	Pasteurellales	3585	0	135625
order	Mycoplasmatales	2297	0	2085
order	Enterobacteriales	2141	0	91347
order	Bacillales	1588	4	1385
order	Halobacteriales	1117	0	2235
order	Herpesvirales	959	0	548681
order	Actinomycetales	872	29	2037
order	Caudovirales	722	0	28883
order	Campylobacterales	699	0	213849
order	Neisseriales	682	0	206351
order	Bacteroidales	668	46	171549
order	Corynebacterineae	588	6	85007
order	Rhizobiales	362	1	356
order	Spirochaetales	271	0	136
order	Xanthomonadales	265	0	135614
order	Micrococcineae	239	2	85006
order	Desulfovibrionales	225	0	213115
order	Aeromonadales	209	0	135624
order	Sulfolobales	137	0	2281
order	Fusobacteriales	110	0	203491
order	Clostridiales	72	1	186802
order	Selenomonadales	71	0	909929
order	Myxococcales	63	0	29
order	Nostocales	47	0	1161
order	Oscillatoriales	45	0	1150
order	Flavobacteriales	30	0	200644
order	Methanobacteriales	29	0	2158
order	Rickettsiales	28	0	766
order	Oceanospirillales	27	0	135619
order	Coriobacteriales	25	0	84999
order	Chroococcales	22	1	1118
order	Methanosarcinales	18	0	94695
order	Thermoanaerobacterales	16	1	68295
order	Mononegavirales	15	0	11157
order	Nidovirales	15	0	76804
order	Chlamydiales	14	0	51291
order	Bifidobacteriales	13	0	85004
order	Alteromonadales	12	0	135622
order	Desulfurococcales	12	0	114380
order	Desulfuromonadales	9	0	69541
order	Thermotogales	8	0	2419
order	Methanococcales	7	0	2182
order	Thermodesulfobacteriales	7	0	188710
order	Streptomycineae	7	0	85011
order	Propionibacterineae	4	0	85009
order	Rhodocyclales	4	0	206389
order	Rhodospirillales	3	0	204441
order	Bdellovibrionales	3	0	213481
order	Methanomicrobiales	2	0	2191
order	Streptosporangineae	2	0	85012
order	Natranaerobiales	2	0	485256
order	Acidobacteriales	2	0	204433
order	Methylococcales	2	0	135618
order	Sphingomonadales	1	0	204457
order	Phycisphaerales	1	0	666506
order	Nitrospirales	1	0	189778
order	Chrysiogenales	1	0	189769
order	Chlorobiales	1	0	191411
order	Nautiliales	1	0	235899
order	Legionellales	1	0	118969
order	Prochlorales	1	0	1212
order	Cytophagales	1	0	768507
order	SAR11 cluster	1	0	54526
order	Sphingobacteriales	1	0	200666
order	Chromatiales	1	0	135613
order	Rhodobacterales	1	0	204455
order	Thermales	1	0	68933
order	Ignavibacteriales	1	0	795748
order	Vibrionales	1	0	135623
order	Desulfobacterales	1	0	213118
order	Acholeplasmatales	1	0	186329
suborder	Nannocystineae	35	0	224462
suborder	Sorangiineae	17	0	80812
suborder	Cystobacterineae	11	0	80811
family	Alcaligenaceae	934148	2	506
family	Microviridae	66818	0	10841
family	Pasteurellaceae	3585	77	712
family	Moraxellaceae	3363	18	468
family	Streptococcaceae	3313	4	1300
family	Mycoplasmataceae	2297	0	2092
family	Enterobacteriaceae	2141	244	543
family	Polydnaviridae	1559	451	10482
family	Halobacteriaceae	1117	0	2236
family	Lactobacillaceae	825	2	33958
family	Staphylococcaceae	764	0	90964
family	Alloherpesviridae	759	0	548682
family	Podoviridae	704	0	10744
family	Helicobacteraceae	692	0	72293
family	Neisseriaceae	682	6	481
family	Bacillaceae	675	0	186817
family	Corynebacteriaceae	572	0	1653
family	Prevotellaceae	489	0	171552
family	Phycodnaviridae	429	0	10501
family	Comamonadaceae	428	2	80864
family	Pseudomonadaceae	327	2	135621
family	Burkholderiaceae	321	2	119060
family	Spirochaetaceae	265	0	137
family	Xanthomonadaceae	265	9	32033
family	Baculoviridae	261	0	10442
family	Enterococcaceae	253	0	81852
family	Desulfovibrionaceae	225	0	194924
family	Micrococcaceae	223	4	1268
family	Aeromonadaceae	209	0	84642
family	Herpesviridae	200	23	10292
family	Poxviridae	186	0	10240
family	Sulfolobaceae	137	0	118883
family	Methylobacteriaceae	131	0	119045
family	Listeriaceae	122	0	186820
family	Bradyrhizobiaceae	111	0	41294
family	Bacteroidaceae	104	0	815
family	Fusobacteriaceae	100	0	203492
family	Veillonellaceae	71	0	31977
family	Rhizobiaceae	60	0	82115
family	Beijerinckiaceae	42	0	45404
family	Kofleriaceae	35	0	224464
family	Nostocaceae	34	0	1162
family	Peptostreptococcaceae	29	0	186804
family	Nimaviridae	27	0	196937
family	Rickettsiaceae	27	0	775
family	Coriobacteriaceae	25	1	84107
family	Methanobacteriaceae	25	0	2159
family	Halomonadaceae	25	0	28256
family	Paenibacillaceae	23	0	186822
family	Lachnospiraceae	21	0	186803
family	Oxalobacteraceae	21	6	75682
family	Flavobacteriaceae	19	0	49546
family	Anelloviridae	18	0	687329
family	Methanosarcinaceae	18	0	2206
family	Polyangiaceae	17	0	49
family	Clostridiales Family XI. Incertae Sedis	16	0	543310
family	Porphyromonadaceae	15	0	171551
family	Coronaviridae	15	0	11118
family	Siphoviridae	15	0	10699
family	Iridoviridae	14	0	10486
family	Bifidobacteriaceae	13	0	31953
family	Rivulariaceae	13	0	1185
family	Pyrodictiaceae	12	0	2307
family	Psychromonadaceae	11	0	267894
family	Ascoviridae	11	0	43682
family	Thermoanaerobacterales Family III. Incertae Sedis	10	0	543371
family	Leptotrichiaceae	10	0	1129771
family	Paramyxoviridae	9	0	11158
family	Parachlamydiaceae	9	0	92713
family	Thermotogaceae	8	0	188709
family	Methanococcaceae	7	0	2183
family	Streptomycetaceae	7	0	2062
family	Mycobacteriaceae	7	0	1762
family	Thermodesulfobacteriaceae	7	0	188711
family	Campylobacteraceae	7	0	72294
family	Adenoviridae	6	0	10508
family	Cystobacteraceae	6	0	39
family	Myxococcaceae	5	0	31
family	Pelobacteraceae	5	0	213423
family	Chlamydiaceae	5	0	809
family	Thermoanaerobacteraceae	5	0	186814
family	Brachyspiraceae	4	0	143786
family	Geobacteraceae	4	0	213422
family	Leuconostocaceae	4	0	81850
family	Rhodocyclaceae	4	0	75787
family	Methanothermaceae	4	0	2178
family	Actinomycetaceae	3	0	2049
family	Propionibacteriaceae	3	0	31957
family	Carnobacteriaceae	3	0	186828
family	Nocardiaceae	3	0	85025
family	Rikenellaceae	3	0	171550
family	Bdellovibrionaceae	3	0	213483
family	Myoviridae	3	0	10662
family	Streptosporangiaceae	2	0	2004
family	Natranaerobiaceae	2	0	485255
family	Dermacoccaceae	2	0	145357
family	Leptospiraceae	2	0	170
family	Clostridiaceae	2	0	31979
family	Acetobacteraceae	2	0	433
family	Acidobacteriaceae	2	0	204434
family	Ruminococcaceae	2	0	541000
family	Orthomyxoviridae	2	0	11308
family	Brucellaceae	2	0	118882
family	Methylococcaceae	2	0	403
family	Potyviridae	1	0	39729
family	Vibrionaceae	1	0	641
family	Chlorobiaceae	1	0	191412
family	Thermaceae	1	0	188786
family	Acholeplasmataceae	1	0	2146
family	Nocardioidaceae	1	0	85015
family	Bartonellaceae	1	0	772
family	Cytophagaceae	1	0	89373
family	Hahellaceae	1	0	224379
family	Virgaviridae	1	0	675071
family	Prochlorococcaceae	1	0	1217
family	Coxiellaceae	1	0	118968
family	Desulfobacteraceae	1	0	213119
family	Nautiliaceae	1	0	224467
family	Methylocystaceae	1	0	31993
family	Saprospiraceae	1	0	89374
family	Chromatiaceae	1	0	1046
family	Parvoviridae	1	0	10780
family	Rhodobacteraceae	1	0	31989
family	Melioribacteraceae	1	0	1334117
family	Sphingomonadaceae	1	0	41297
family	Nitrospiraceae	1	0	189779
family	Methanocorpusculaceae	1	0	88404
family	Phycisphaeraceae	1	0	666507
family	Chrysiogenaceae	1	0	189770
family	Papillomaviridae	1	0	151340
family	Rhodospirillaceae	1	0	41295
family	Anaplasmataceae	1	0	942
family	Ferrimonadaceae	1	0	267892
family	Oceanospirillaceae	1	0	135620
family	Methanoregulaceae	1	0	1198451
subfamily	Autographivirinae	704	0	542835
subfamily	Chordopoxvirinae	186	0	10241
subfamily	Betaherpesvirinae	87	0	10357
subfamily	Alphaherpesvirinae	74	0	10293
subfamily	Gammaherpesvirinae	16	0	10374
subfamily	Coronavirinae	15	0	693995
subfamily	Paramyxovirinae	7	0	11159
subfamily	Pneumovirinae	2	0	11244
subfamily	Peduovirinae	1	0	857479
subfamily	Parvovirinae	1	0	40119
tribe	Rickettsieae	27	0	33988
genus	Achromobacter	934138	0	222
genus	Microvirus	66818	72	10842
genus	Haemophilus	3425	21	724
genus	Streptococcus	3306	529	1301
genus	Mycoplasma	2297	6	2093
genus	Moraxella	2232	0	475
genus	Acinetobacter	1113	50	469
genus	Ichnovirus	1100	4	10483
genus	Lactobacillus	823	19	1578
genus	Staphylococcus	762	17	1279
genus	Ictalurivirus	723	0	172653
genus	T7likevirus	704	0	110456
genus	Helicobacter	692	0	209
genus	Salinarchaeum	686	0	1269201
genus	Neisseria	672	198	482
genus	Bacillus	639	0	1386
genus	Corynebacterium	572	127	1716
genus	Klebsiella	537	61	570
genus	Prevotella	489	22	838
genus	Serratia	476	5	613
genus	Escherichia	434	10	561
genus	Verminephrobacter	420	0	364316
genus	Natrialba	380	0	63742
genus	Pseudomonas	324	11	286
genus	Burkholderia	310	5	32008
genus	Coccolithovirus	309	0	346673
genus	Enterococcus	251	93	1350
genus	Alphabaculovirus	249	0	558016
genus	Borrelia	229	0	138
genus	Lawsonia	225	0	41707
genus	Rothia	219	4	32207
genus	Aeromonas	207	0	642
genus	Orthopoxvirus	175	93	10242
genus	Xanthomonas	163	0	338
genus	Proteus	137	0	583
genus	Sulfolobus	137	0	2284
genus	Methylobacterium	131	0	407
genus	Listeria	122	0	1637
genus	Phaeovirus	116	0	181085
genus	Bacteroides	104	6	816
genus	Fusobacterium	98	0	848
genus	Rhodopseudomonas	97	0	1073
genus	Stenotrophomonas	76	0	40323
genus	Veillonella	70	0	29465
genus	Simplexvirus	66	0	10294
genus	Dickeya	64	0	204037
genus	Enterobacter	64	4	547
genus	Muromegalovirus	63	0	10365
genus	Histophilus	50	0	214906
genus	Morganella	45	0	581
genus	Yersinia	42	3	629
genus	Beijerinckia	42	0	532
genus	Oscillatoria	39	0	1158
genus	Geobacillus	36	1	129337
genus	Treponema	36	1	157
genus	Cyprinivirus	36	0	692606
genus	Haliangium	35	0	162027
genus	Sinorhizobium	35	0	28105
genus	Buchnera	32	0	32199
genus	Anabaena	30	0	1163
genus	Rickettsia	27	0	780
genus	Whispovirus	27	0	249585
genus	Candidatus Portiera	25	0	235572
genus	Shigella	25	0	620
genus	Natronococcus	25	0	29287
genus	Paenibacillus	23	0	44249
genus	Filifactor	22	0	44259
genus	Halovivax	22	0	332951
genus	Roseburia	21	0	841
genus	Methanobrevibacter	18	0	2172
genus	Methanosarcina	18	0	2207
genus	Sorangium	17	0	39643
genus	Roseolovirus	17	0	40272
genus	Candidatus Liberibacter	16	0	34019
genus	Providencia	15	0	586
genus	Finegoldia	15	0	150022
genus	Alphatorquevirus	15	4	687331
genus	Atopobium	15	0	1380
genus	Alphacoronavirus	14	0	693996
genus	Mannheimia	14	0	75984
genus	Ranavirus	14	0	10492
genus	Pseudoxanthomonas	13	0	83618
genus	Bifidobacterium	13	7	1678
genus	Candidatus Hodgkinia	13	0	573657
genus	Tropheryma	12	0	2038
genus	Macavirus	12	0	548687
genus	Pyrolobus	12	0	54251
genus	Ascovirus	11	0	43680
genus	Candidatus Sulcia	11	0	336809
genus	Psychromonas	11	0	67572
genus	Candidatus Azobacteroides	11	0	511434
genus	Capnocytophaga	11	0	1016
genus	Betabaculovirus	11	0	558017
genus	Molluscipoxvirus	10	0	10278
genus	Aggregatibacter	10	1	416916
genus	Caldicellulosiruptor	10	0	44000
genus	Tannerella	10	0	195950
genus	Nitrobacter	10	0	911
genus	Rivularia	10	0	373984
genus	Parachlamydia	9	0	83551
genus	Bracovirus	8	0	10485
genus	Salmonella	8	0	590
genus	Gloeocapsa	8	0	102231
genus	Rhizobium	8	0	379
genus	Leptotrichia	8	0	32067
genus	Mycobacterium	7	0	1763
genus	Mardivirus	7	0	180252
genus	Mesotoga	7	0	1184396
genus	Streptomyces	7	0	1883
genus	Janthinobacterium	7	0	29580
genus	Campylobacter	7	0	194
genus	Methanobacterium	7	0	2160
genus	Microcystis	7	0	1125
genus	Thermodesulfobacterium	7	0	1740
genus	Respirovirus	7	0	186938
genus	Citrobacter	6	0	544
genus	Methanococcus	6	0	2184
genus	Bordetella	6	2	517
genus	Stigmatella	6	0	40
genus	Mastadenovirus	6	0	10509
genus	Eggerthella	6	0	84111
genus	Chlamydia	5	0	810
genus	Anaeromyxobacter	5	0	161492
genus	Herbaspirillum	5	0	963
genus	Pelobacter	5	0	18
genus	Cytomegalovirus	4	0	10358
genus	Leuconostoc	4	0	1243
genus	Nostoc	4	0	1177
genus	Bradyrhizobium	4	0	374
genus	Pandoraea	4	0	93217
genus	Geobacter	4	0	28231
genus	Chlorovirus	4	1	181083
genus	Methanothermus	4	0	2179
genus	Brachyspira	4	0	29521
genus	Actinobacillus	4	0	713
genus	Cyanothece	3	2	43988
genus	Haloquadratum	3	0	293431
genus	Pasteurella	3	0	745
genus	Thermoanaerobacter	3	0	1754
genus	Chamaesiphon	3	0	217161
genus	Betatorquevirus	3	0	687332
genus	Calothrix	3	0	1186
genus	Arthrospira	3	0	35823
genus	Cupriavidus	3	2	106589
genus	Carnobacterium	3	0	2747
genus	Bdellovibrio	3	0	958
genus	Cellulophaga	3	0	104264
genus	Variovorax	3	0	34072
genus	Cryptobacterium	3	0	84162
genus	Xylella	3	0	2370
genus	Alistipes	3	0	239759
genus	Lactococcus	3	0	1357
genus	Mobiluncus	3	0	2050
genus	Porphyromonas	3	0	836
genus	Microlunatus	3	0	29404
genus	Methylomonas	2	0	416
genus	Pneumovirus	2	0	11245
genus	Caldanaerobacter	2	0	249529
genus	Rhadinovirus	2	0	10379
genus	Ralstonia	2	0	48736
genus	Tolumonas	2	0	43947
genus	Trichodesmium	2	0	1205
genus	Lymphocryptovirus	2	0	10375
genus	Delftia	2	0	80865
genus	Acidiphilium	2	0	522
genus	Croceibacter	2	0	216431
genus	Streptosporangium	2	0	2000
genus	Ilyobacter	2	0	167639
genus	Collimonas	2	0	202907
genus	Chromobacterium	2	0	535
genus	Clostridium	2	2	1485
genus	Natranaerobius	2	0	375928
genus	Xenorhabdus	2	0	626
genus	Taylorella	2	0	29574
genus	Pseudogulbenkiania	2	0	568394
genus	Streptobacillus	2	0	34104
genus	Phikzlikevirus	2	0	680115
genus	Candidatus Carsonella	2	0	114185
genus	Terriglobus	2	0	392733
genus	Cronobacter	2	0	413496
genus	Odoribacter	2	0	283168
genus	Methylibium	2	0	316612
genus	Dechloromonas	2	0	73029
genus	Rhodococcus	2	0	1827
genus	Macrococcus	2	0	69965
genus	Ruminococcus	2	0	1263
genus	Kytococcus	2	0	57499
genus	Pantoea	2	0	53335
genus	Leptospira	2	0	171
genus	Brucella	2	2	234
genus	Tetragenococcus	2	0	51668
genus	Frateuria	1	0	70411
genus	Melioribacter	1	0	1134403
genus	Azoarcus	1	0	12960
genus	Marinomonas	1	0	28253
genus	Methanothermococcus	1	0	155862
genus	Selenomonas	1	0	970
genus	Thiocystis	1	0	13724
genus	Chlorobium	1	0	1091
genus	Gramella	1	0	292691
genus	Hpunalikevirus	1	0	1196844
genus	Influenzavirus B	1	0	197912
genus	Desulfurispirillum	1	0	393029
genus	Avipoxvirus	1	0	10260
genus	Methanoregula	1	0	395331
genus	Methanocorpusculum	1	0	2192
genus	Agrobacterium	1	0	357
genus	Candidatus Phytoplasma	1	0	33926
genus	Candidatus Cardinium	1	0	273135
genus	Bartonella	1	0	773
genus	Varicellovirus	1	0	10319
genus	Edwardsiella	1	0	635
genus	Betacoronavirus	1	0	694002
genus	Desulfococcus	1	0	896
genus	Influenzavirus A	1	0	197911
genus	Phycisphaera	1	0	666508
genus	Amdovirus	1	0	310911
genus	Anaerococcus	1	0	165779
genus	Methylocystis	1	0	133
genus	Nocardia	1	0	1817
genus	Coxiella	1	0	776
genus	Ehrlichia	1	0	943
genus	Ferrimonas	1	0	44011
genus	Sphingomonas	1	1	13687
genus	Deltabaculovirus	1	0	558019
genus	Nautilia	1	0	191291
genus	Crinalium	1	0	241421
genus	Tobamovirus	1	0	12234
genus	Lacinutrix	1	0	291183
genus	Leisingera	1	0	191028
genus	Cellvibrio	1	0	10
genus	Thauera	1	0	33057
genus	Prochlorococcus	1	0	1218
genus	Haliscomenobacter	1	0	2349
genus	Thermus	1	0	270
genus	Zobellia	1	0	112040
genus	Herminiimonas	1	0	303379
genus	Hahella	1	0	158481
genus	Magnetospirillum	1	0	13134
genus	Natronobacterium	1	0	2256
genus	Nocardioides	1	0	1839
genus	Gallibacterium	1	0	155493
genus	Nitrospira	1	0	1234
genus	Flexibacter	1	0	992
genus	Vibrio	1	0	662
genus	Basfia	1	0	697331
genus	Potyvirus	1	0	12195
genus	Thermosipho	1	0	2420
subgenus	Branhamella	2232	0	46226
species group	Acinetobacter calcoaceticus/baumannii complex	1063	10	909768
species group	Bacillus cereus group	562	1	86661
species group	pseudomallei group	295	0	111527
species group	Pseudomonas syringae group	170	1	136849
species group	Streptococcus anginosus group	137	26	671232
species group	Pseudomonas aeruginosa group	77	0	136841
species group	Borrelia burgdorferi group	67	0	64895
species group	Enterobacter cloacae complex	56	4	354276
species group	Pseudomonas fluorescens group	38	1	136843
species group	spotted fever group	27	0	114277
species group	Lactobacillus casei group	13	6	655183
species group	Pseudomonas putida group	12	0	136845
species group	Burkholderia cepacia complex	7	0	87882
species group	Streptococcus dysgalactiae group	6	0	119603
species group	Bacillus subtilis group	3	0	653685
species group	Mycobacterium chelonae group	3	0	670516
species group	Pseudomonas stutzeri group	2	0	136846
species group	Agrobacterium tumefaciens complex	1	0	1183400
species group	Candidatus Phytoplasma asteris	1	0	85620
species group	Mycobacterium tuberculosis complex	1	0	77643
species group	Mycobacterium avium complex (MAC)	1	0	120793
species group	Vibrio harveyi group	1	0	717610
species group	canis group	1	0	106178
species subgroup	Pseudomonas syringae group genomosp. 2	166	0	251698
species subgroup	Pseudomonas syringae group genomosp. 1	3	0	251695
species subgroup	Mycobacterium abscessus subgroup	3	0	670506
species subgroup	Pseudomonas stutzeri subgroup	2	0	578833
species	Achromobacter xylosoxidans	934138	4	85698
species	Enterobacteria phage phiX174 sensu lato	66741	66741	374840
species	Haemophilus influenzae	3258	2404	727
species	Moraxella catarrhalis	2232	0	480
species	Mycoplasma hyopneumoniae	1526	13	2099
species	Acinetobacter baumannii	1052	1000	470
species	Streptococcus parasanguinis	790	367	1318
species	Hyposoter fugitivus ichnovirus	770	770	265522
species	Ictalurid herpesvirus 1	723	723	10401
species	Yersinia phage phiA1122	704	704	227720
species	Salinarchaeum sp. Harcht-Bsk1	686	686	1333523
species	Lactobacillus rhamnosus	683	460	47715
species	Staphylococcus aureus	630	591	1280
species	Mycoplasma hyorhinis	570	499	2100
species	Bacillus thuringiensis	558	0	1428
species	Klebsiella pneumoniae	476	406	573
species	Helicobacter bizzozeronii	462	0	56877
species	Serratia marcescens	436	2	615
species	Escherichia coli	424	324	562
species	Verminephrobacter eiseniae	420	0	364317
species	Natrialba magadii	380	0	13769
species	Prevotella melaninogenica	357	0	28132
species	Neisseria meningitidis	333	240	487
species	Streptococcus agalactiae	328	299	1311
species	Streptococcus suis	326	5	1307
species	Glypta fumiferanae ichnovirus	325	325	419435
species	Emiliania huxleyi virus 86	309	309	181082
species	Burkholderia mallei	291	270	13373
species	Corynebacterium aurimucosum	262	0	169292
species	Lawsonia intracellularis	225	0	29546
species	Streptococcus pneumoniae	209	158	1313
species	Aeromonas hydrophila	206	0	644
species	Streptococcus salivarius	206	88	1304
species	Maruca vitrata nucleopolyhedrovirus	202	202	1307954
species	Rothia mucilaginosa	195	0	43675
species	Streptococcus oralis	189	0	1303
species	Helicobacter cetorum	180	0	138563
species	Streptococcus mitis	177	0	28037
species	Pseudomonas savastanoi	166	0	29438
species	Xanthomonas campestris	160	122	339
species	Enterococcus faecalis	157	76	1351
species	Mycoplasma ovis	145	0	171632
species	Haemophilus parainfluenzae	143	0	729
species	Sulfolobus islandicus	137	0	43080
species	Proteus mirabilis	137	40	584
species	Methylobacterium radiotolerans	124	0	31998
species	Listeria monocytogenes	122	122	1639
species	Ectocarpus siliculosus virus 1	116	116	37665
species	Borrelia duttonii	103	0	40834
species	Fusobacterium nucleatum	98	15	851
species	Rhodopseudomonas palustris	97	0	1076
species	Staphylococcus epidermidis	97	68	1282
species	Corynebacterium diphtheriae	93	63	1717
species	Streptococcus pseudopneumoniae	87	0	257758
species	Neisseria lactamica	80	0	486
species	Stenotrophomonas maltophilia	76	29	40324
species	Streptococcus pyogenes	75	72	1314
species	Pseudomonas aeruginosa	75	49	287
species	Bacillus infantis	74	0	324767
species	Vaccinia virus	73	73	10245
species	Veillonella parvula	70	0	29466
species	Borrelia valaisiana	65	0	62088
species	Dickeya dadantii	64	0	204038
species	Neisseria gonorrhoeae	61	35	485
species	Murid herpesvirus 2	61	61	28304
species	Borrelia crocidurae	59	0	29520
species	Bacteroides helcogenes	57	0	290053
species	Streptococcus sp. I-P16	54	54	1156433
species	Streptococcus sp. I-G2	52	52	1156431
species	Streptococcus anginosus	50	22	1328
species	Helicobacter pylori	50	2	210
species	Histophilus somni	50	0	731
species	Enterobacter cloacae	49	8	550
species	Morganella morganii	45	0	582
species	Streptococcus gordonii	42	0	1302
species	Beijerinckia indica	42	0	533
species	Streptococcus oligofermentans	41	0	195041
species	Bacteroides fragilis	41	24	817
species	Streptococcus sanguinis	40	0	1305
species	Prevotella sp. oral taxon 299	40	0	652716
species	Lactobacillus gasseri	39	0	1596
species	Cercopithecine herpesvirus 2	38	38	10317
species	Corynebacterium resistens	38	0	258224
species	Prevotella denticola	37	0	28129
species	Pseudomonas fluorescens	36	9	294
species	Haliangium ochraceum	35	0	80816
species	Serratia plymuthica	34	2	82996
species	Streptococcus constellatus	34	0	76860
species	Buchnera aphidicola	32	0	9
species	Oscillatoria acuminata	28	0	118323
species	Human herpesvirus 1	28	28	10298
species	Rickettsia africae	27	0	35788
species	White spot syndrome virus	27	0	342409
species	Mamestra configurata nucleopolyhedrovirus A	27	27	207830
species	Anabaena sp. 90	27	27	46234
species	Streptococcus intermedius	27	16	1338
species	Cyprinid herpesvirus 3	25	25	180230
species	Natronococcus occultus	25	0	29288
species	Shigella flexneri	25	25	623
species	Candidatus Portiera aleyrodidarum	25	25	91844
species	Sinorhizobium meliloti	23	23	382
species	Prevotella intermedia	23	0	28131
species	Halovivax ruber	22	0	387341
species	Filifactor alocis	22	0	143361
species	Paenibacillus mucilaginosus	22	0	61624
species	Yersinia enterocolitica	21	0	630
species	Rothia dentocariosa	20	0	2047
species	Geobacillus thermoleovorans	20	0	33941
species	Roseburia hominis	19	0	301301
species	Treponema pedis	18	0	409322
species	Lactobacillus sanfranciscensis	18	0	1625
species	Sorangium cellulosum	17	0	56
species	Human herpesvirus 7	17	17	10372
species	Yersinia pseudotuberculosis	16	5	633
species	Candidatus Liberibacter americanus	16	0	309868
species	Staphylococcus haemolyticus	16	0	1283
species	Treponema denticola	15	0	158
species	Finegoldia magna	15	0	1260
species	Providencia stuartii	15	0	588
species	Lactobacillus fermentum	15	13	1613
species	Methanosarcina barkeri	15	0	2208
species	Atopobium parvulum	15	0	1382
species	Human coronavirus NL63	14	14	277944
species	Corynebacterium callunae	14	0	1721
species	Geobacillus sp. GHH01	14	14	1233873
species	Mannheimia haemolytica	14	7	75985
species	Frog virus 3	14	14	10493
species	Pseudoxanthomonas spadix	13	0	415229
species	Candidatus Hodgkinia cicadicola	13	0	573658
species	Tropheryma whipplei	12	5	2039
species	Pyrolobus fumarii	12	0	54252
species	Streptococcus thermophilus	12	10	1308
species	Sinorhizobium fredii	12	0	380
species	Corynebacterium urealyticum	12	7	43771
species	Ovine herpesvirus 2	12	12	10398
species	Psychromonas ingrahamii	11	0	357794
species	Anguillid herpesvirus 1	11	11	150286
species	Candidatus Sulcia muelleri	11	0	336810
species	Capnocytophaga ochracea	11	0	1018
species	Trichoplusia ni ascovirus 2c	11	11	328615
species	Oscillatoria nigro-viridis	11	0	482564
species	Mycoplasma suis	11	0	57372
species	Candidatus Azobacteroides pseudotrichonymphae	11	0	511435
species	Mycoplasma genitalium	11	0	2097
species	Methanobrevibacter smithii	10	0	2173
species	Agrotis segetum nucleopolyhedrovirus	10	10	31508
species	Pseudomonas putida	10	2	303
species	Lactobacillus reuteri	10	8	1598
species	Tannerella forsythia	10	0	28112
species	Molluscum contagiosum virus	10	0	10279
species	Rivularia sp. PCC 7116	10	10	373994
species	Nitrobacter hamburgensis	10	0	912
species	Pseudomonas sp. TKP	9	9	1415630
species	Mycoplasma cynos	9	0	171284
species	Parachlamydia acanthamoebae	9	0	83552
species	Lactobacillus ruminis	9	0	1623
species	Aggregatibacter aphrophilus	9	0	732
species	Cotesia congregata bracovirus	8	8	39640
species	Gloeocapsa sp. PCC 7428	8	8	1173026
species	Corynebacterium glutamicum	8	8	1718
species	Corynebacterium jeikeium	8	0	38289
species	Rhizobium leguminosarum	8	0	384
species	Spodoptera frugiperda multiple nucleopolyhedrovirus	8	8	10455
species	Leptotrichia buccalis	8	0	40542
species	Prevotella dentalis	8	0	52227
species	Salmonella enterica	8	0	28901
species	Thermodesulfobacterium geofontis	7	0	1295609
species	Methanobrevibacter ruminantium	7	0	83816
species	[Clostridium] difficile	7	4	1496
species	Caldicellulosiruptor saccharolyticus	7	0	44001
species	Pseudaletia unipuncta granulovirus	7	7	36355
species	Mesotoga prima	7	0	1184387
species	Mycoplasma gallisepticum	7	0	2096
species	Microcystis aeruginosa	7	0	1126
species	Janthinobacterium sp. Marseille	7	7	375286
species	Eggerthella lenta	6	0	84112
species	Stigmatella aurantiaca	6	0	41
species	Torque teno virus 16	6	6	687355
species	Meleagrid herpesvirus 1	6	6	37108
species	Methylobacterium nodulans	6	0	114616
species	Burkholderia lata	6	6	482957
species	Nyamanini virus	6	6	644610
species	Lactobacillus johnsonii	6	4	33959
species	Lactobacillus casei	5	3	1582
species	Torque teno virus 3	5	5	687342
species	Human parainfluenza virus 3	5	5	11216
species	Pelobacter propionicus	5	0	29543
species	Lactobacillus salivarius	5	5	1624
species	Chlamydia pecorum	5	2	85991
species	Citrobacter koseri	5	0	545
species	Pseudomonas brassicacearum	5	0	930166
species	Anaeromyxobacter sp. Fw109-5	5	5	404589
species	Herbaspirillum seropedicae	5	0	964
species	Choristoneura occidentalis granulovirus	4	4	364745
species	Lactobacillus sakei	4	0	1599
species	Bradyrhizobium oligotrophicum	4	0	44255
species	Methanococcus aeolicus	4	0	42879
species	Pseudomonas phage D3	4	4	31535
species	Human adenovirus C	4	4	129951
species	Cercopithecine herpesvirus 5	4	4	50292
species	Streptococcus mutans	4	4	1309
species	Cowpox virus	4	4	10243
species	Methanothermus fervidus	4	0	2180
species	Mycoplasma pulmonis	4	0	2107
species	Burkholderia pseudomallei	4	0	28450
species	Bifidobacterium animalis	4	0	28025
species	Mycoplasma conjunctivae	4	0	45361
species	Geobacter uraniireducens	4	0	351604
species	Corynebacterium maris	4	0	575200
species	Microlunatus phosphovorus	3	0	29405
species	Mobiluncus curtisii	3	0	2051
species	Xanthomonas euvesicatoria	3	0	456327
species	Calothrix parietina	3	0	32054
species	Anabaena cylindrica	3	0	1165
species	Haloquadratum walsbyi	3	0	293091
species	Bacillus amyloliquefaciens	3	3	1390
species	Variovorax paradoxus	3	0	34073
species	Arthrospira platensis	3	0	118562
species	Actinobacillus pleuropneumoniae	3	3	715
species	Pandoraea pnomenusa	3	0	93220
species	Alistipes shahii	3	0	328814
species	secondary endosymbiont of Heteropsylla cubana	3	3	134287
species	Bdellovibrio bacteriovorus	3	0	959
species	Chamaesiphon minutus	3	0	1173032
species	Campylobacter hominis	3	0	76517
species	Lactococcus lactis	3	1	1358
species	Haemophilus parasuis	3	2	738
species	Mycobacterium abscessus	3	3	36809
species	Xylella fastidiosa	3	0	2371
species	Staphylococcus phage PH15	3	3	399185
species	Streptococcus dysgalactiae	3	0	1334
species	Caldicellulosiruptor kronotskyensis	3	0	413889
species	Pasteurella multocida	3	1	747
species	Thermoanaerobacter wiegelii	3	0	46354
species	Pseudomonas syringae	3	0	317
species	Enterobacter lignolyticus	3	0	1334193
species	Tupaiid herpesvirus 1	3	3	10397
species	Bacillus cereus	3	0	1396
species	Cellulophaga algicola	3	0	59600
species	Cryptobacterium curtum	3	0	84163
species	Streptococcus equi	3	0	1336
species	Streptomyces venezuelae	3	0	54571
species	Streptomyces cattleya	3	0	29303
species	Brachyspira pilosicoli	2	1	52584
species	Murid herpesvirus 1	2	2	10366
species	Torque teno mini virus 5	2	2	687373
species	Treponema succinifaciens	2	0	167
species	Methanosarcina acetivorans	2	0	2214
species	Ruminococcus albus	2	0	1264
species	Enterobacter aerogenes	2	0	548
species	Carnobacterium sp. 17-4	2	2	208596
species	Bordetella petrii	2	0	94624
species	Pseudomonas phage PAJU2	2	2	504346
species	Trichodesmium erythraeum	2	0	1206
species	Respiratory syncytial virus	2	2	12814
species	Methylibium petroleiphilum	2	0	105560
species	Yersinia pestis	2	2	632
species	Choristoneura fumiferana DEF multiple nucleopolyhedrovirus	2	2	74660
species	Campylobacter coli	2	0	195
species	Candidatus Carsonella ruddii	2	0	114186
species	Kytococcus sedentarius	2	0	1276
species	Lactobacillus paracasei	2	0	1597
species	Terriglobus roseus	2	0	392734
species	Burkholderia xenovorans	2	0	36873
species	Collimonas fungivorans	2	0	158899
species	Pseudomonas mendocina	2	0	300
species	Lactobacillus buchneri	2	0	1581
species	Bordetella avium	2	0	521
species	Ateline herpesvirus 3	2	2	85618
species	Odoribacter splanchnicus	2	0	28118
species	Leuconostoc mesenteroides	2	0	1245
species	Pseudogulbenkiania sp. NH8B	2	2	748280
species	Methanococcus voltae	2	0	2188
species	Pantoea ananatis	2	2	553
species	Porphyromonas gingivalis	2	0	837
species	Chromobacterium violaceum	2	0	536
species	Leptospira interrogans	2	0	173
species	Dechloromonas aromatica	2	0	259537
species	Streptosporangium roseum	2	0	2001
species	Tolumonas auensis	2	0	43948
species	Nostoc punctiforme	2	0	272131
species	Nostoc sp. PCC 7120	2	2	103690
species	Leuconostoc citreum	2	0	33964
species	Methylomonas methanica	2	0	421
species	Pseudomonas phage phiKZ	2	2	169683
species	Streptococcus phage PH10	2	2	644007
species	Ilyobacter polytropus	2	0	167642
species	Bifidobacterium longum	2	2	216816
species	Natranaerobius thermophilus	2	0	375929
species	Paramecium bursaria Chlorella virus AR158	2	2	380598
species	Tetragenococcus halophilus	2	0	51669
species	Croceibacter atlanticus	2	0	313588
species	Enterobacteria phage ID18 sensu lato	2	2	489829
species	Rhodococcus erythropolis	2	2	1833
species	Brachyspira murdochii	2	0	84378
species	Campylobacter concisus	2	0	199
species	Pseudomonas stutzeri	2	0	316
species	Caldanaerobacter subterraneus	2	0	911092
species	Delftia acidovorans	2	0	80866
species	Bovine parainfluenza virus 3	2	2	11215
species	Streptobacillus moniliformis	2	0	34105
species	Enterobacter sp. R4-368	2	2	1166130
species	Enterobacteriaceae bacterium strain FGI 57	2	2	693444
species	Macrococcus caseolyticus	2	0	69966
species	Mycoplasma wenyonii	2	0	65123
species	Ralstonia pickettii	2	0	329
species	Taterapox virus	2	2	28871
species	Human adenovirus B	2	2	108098
species	Human herpesvirus 4	2	2	10376
species	Acidiphilium multivorum	2	0	62140
species	Pseudomonas fulva	2	0	47880
species	Camelpox virus	2	2	28873
species	Enterobacteria phage G4 sensu lato	2	2	374844
species	Roseburia intestinalis	2	0	166486
species	Borrelia burgdorferi	2	0	139
species	Prevotella ruminicola	2	0	839
species	Taylorella equigenitalis	2	2	29575
species	Xenorhabdus nematophila	2	0	628
species	Cronobacter sakazakii	2	0	28141
species	Haliscomenobacter hydrossis	1	0	2350
species	Vibrio parahaemolyticus	1	0	670
species	Azoarcus sp. KH32C	1	1	748247
species	Cellvibrio japonicus	1	0	155077
species	Corynebacterium argentoratense	1	0	42817
species	Acinetobacter calcoaceticus	1	0	471
species	Methanoregula boonei	1	0	358766
species	Mycobacterium yongonense	1	0	1203599
species	Corynebacterium ulcerans	1	1	65058
species	Staphylococcus pseudintermedius	1	1	283734
species	Albidiferax ferrireducens	1	0	192843
species	Anaerococcus prevotii	1	0	33034
species	Crinalium epipsammum	1	0	241425
species	Burkholderia cenocepacia	1	1	95486
species	Frateuria aurantia	1	0	81475
species	Phycisphaera mikurensis	1	0	547188
species	Mannheimia succiniciproducens	1	0	157673
species	Mycobacterium chubuense	1	0	1800
species	Streptococcus parauberis	1	0	1348
species	Methylobacterium sp. 4-46	1	1	426117
species	Paramecium bursaria Chlorella virus NY2A	1	1	46021
species	Methanocorpusculum labreanum	1	0	83984
species	Chlorobium phaeobacteroides	1	0	1096
species	Melioribacter roseus	1	0	1134405
species	Actinobacillus suis	1	0	716
species	Ehrlichia canis	1	0	944
species	Ferrimonas balearica	1	0	44012
species	Lacinutrix sp. 5H-3-7-4	1	1	983544
species	Prochlorococcus marinus	1	0	1219
species	Mycobacterium canettii	1	0	78331
species	Methanosarcina mazei	1	0	2209
species	Thermosipho africanus	1	0	2421
species	Leisingera methylohalidivorans	1	0	133924
species	Thauera sp. MZ1T	1	1	85643
species	Streptococcus phage PH15	1	1	537874
species	Campoletis sonorensis ichnovirus	1	1	10484
species	Aster yellows witches'-broom phytoplasma	1	0	229545
species	Porphyromonas asaccharolytica	1	0	28123
species	Streptomyces scabiei	1	0	1930
species	Nocardia farcinica	1	0	37329
species	Desulfococcus oleovorans	1	0	181663
species	Candidatus Nitrospira defluvii	1	1	330214
species	Influenza A virus	1	0	11320
species	Cyanothece sp. PCC 8802	1	1	395962
species	Mycoplasma arthritidis	1	0	2111
species	Citrobacter rodentium	1	0	67825
species	Bartonella grahamii	1	0	33045
species	alpha proteobacterium HIMB59	1	1	744985
species	Agrobacterium fabrum	1	0	1176649
species	Gallid herpesvirus 2	1	1	10390
species	Thermus scotoductus	1	0	37636
species	Staphylococcus saprophyticus	1	0	29385
species	Nocardioides sp. JS614	1	1	196162
species	Mycoplasma bovis	1	1	28903
species	Nautilia profundicola	1	0	244787
species	Thiocystis violascens	1	0	73141
species	Methylocystis sp. SC2	1	1	187303
species	Canarypox virus	1	1	44088
species	Carnobacterium maltaromaticum	1	0	2751
species	Flexibacter litoralis	1	0	999
species	Pandoraea sp. RB-44	1	1	1380774
species	Geobacillus sp. WCH70	1	1	471223
species	Serratia proteamaculans	1	0	28151
species	Corynebacterium variabile	1	0	1727
species	Edwardsiella ictaluri	1	0	67780
species	Cardinium endosymbiont of Encarsia pergandiella	1	0	249402
species	Pseudomonas phage F10	1	1	347324
species	Influenza B virus	1	1	11520
species	Enterobacteria phage ID2 Moscow/ID/2001	1	1	511969
species	Coxiella burnetii	1	0	777
species	Haemophilus phage HP1	1	1	10690
species	Corynebacterium halotolerans	1	0	225326
species	Gramella forsetii	1	0	411153
species	Marinomonas mediterranea	1	0	119864
species	Gallibacterium anatis	1	0	750
species	Natronobacterium gregoryi	1	0	44930
species	Zobellia galactanivorans	1	1	63186
species	Selenomonas sputigena	1	0	69823
species	Burkholderia rhizoxinica	1	0	412963
species	Corynebacterium efficiens	1	0	152794
species	Streptococcus infantarius	1	0	102684
species	Hahella chejuensis	1	0	158327
species	Paenibacillus polymyxa	1	0	1406
species	Cupriavidus metallidurans	1	0	119219
species	Desulfurispirillum indicum	1	0	936456
species	Ectromelia virus	1	1	12643
species	Bovine herpesvirus 1	1	1	10320
species	Candidatus Baumannia cicadellinicola	1	0	186490
species	Magnetospirillum gryphiswaldense	1	0	55518
species	Culex nigripalpus nucleopolyhedrovirus	1	1	130556
species	Mycobacterium smegmatis	1	0	1772
species	Moroccan watermelon mosaic virus	1	1	167129
species	Cucumber green mottle mosaic virus	1	1	12235
species	Betacoronavirus 1	1	0	694003
species	Pseudomonas poae	1	0	200451
species	Methanobrevibacter sp. AbM4	1	1	224719
species	Herminiimonas arsenicoxydans	1	1	204773
species	Aeromonas veronii	1	0	654
species	Torque teno mini virus 7	1	1	687375
species	Enterococcus hirae	1	0	1354
species	Methanothermococcus okinawensis	1	0	155863
species	Corynebacterium pseudotuberculosis	1	1	1719
subspecies	Fusobacterium nucleatum subsp. vincentii	46	0	155615
subspecies	Morganella morganii subsp. morganii	45	0	180434
subspecies	Beijerinckia indica subsp. indica	42	0	31994
subspecies	Staphylococcus aureus subsp. aureus	37	28	46170
subspecies	Enterobacter cloacae subsp. cloacae	37	0	336306
subspecies	Streptococcus constellatus subsp. pharyngis	34	33	184250
subspecies	Klebsiella pneumoniae subsp. pneumoniae	34	21	72407
subspecies	Fusobacterium nucleatum subsp. animalis	30	0	76859
subspecies	Yersinia enterocolitica subsp. palearctica	21	0	150053
subspecies	Salmonella enterica subsp. enterica	8	2	59201
subspecies	Fusobacterium nucleatum subsp. nucleatum	7	0	76856
subspecies	Pseudomonas brassicacearum subsp. brassicacearum	5	0	86264
subspecies	Bifidobacterium animalis subsp. lactis	4	2	302911
subspecies	Lactobacillus sakei subsp. sakei	4	0	214326
subspecies	Streptococcus dysgalactiae subsp. equisimilis	3	0	119602
subspecies	Lactobacillus paracasei subsp. paracasei	2	0	47714
subspecies	Lactococcus lactis subsp. cremoris	2	2	1359
subspecies	Caldanaerobacter subterraneus subsp. tengcongensis	2	0	119072
subspecies	Pasteurella multocida subsp. multocida	2	0	44283
subspecies	Enterobacter cloacae subsp. dissolvens	2	0	69219
subspecies	Streptococcus equi subsp. zooepidemicus	2	0	40041
subspecies	Leuconostoc mesenteroides subsp. mesenteroides	2	0	33967
subspecies	Streptococcus equi subsp. equi	1	0	148942
subspecies	Staphylococcus saprophyticus subsp. saprophyticus	1	0	147452
subspecies	Streptococcus infantarius subsp. infantarius	1	0	150054
strain	Achromobacter xylosoxidans NBRC 15126 = ATCC 27061	934128	934128	1216976
strain	Moraxella catarrhalis RH4	2232	2232	749219
strain	Mycoplasma hyopneumoniae J	951	951	262719
strain	Bacillus thuringiensis MC28	554	554	1195464
strain	Helicobacter bizzozeronii CIII-1	462	462	1002804
strain	Verminephrobacter eiseniae EF01-2	420	420	391735
strain	Mycoplasma hyopneumoniae 7448	420	420	262722
strain	Natrialba magadii ATCC 43099	380	380	547559
strain	Serratia marcescens FGI94	366	366	1249634
strain	Prevotella melaninogenica ATCC 25845	357	357	553174
strain	Streptococcus suis JS14	321	321	945704
strain	Haemophilus influenzae 86-028NP	270	270	281310
strain	Corynebacterium aurimucosum ATCC 700975	262	262	548476
strain	Lawsonia intracellularis N343	224	224	1234378
strain	Streptococcus parasanguinis FW213	214	214	1114965
strain	Streptococcus parasanguinis ATCC 15912	209	209	760570
strain	Aeromonas hydrophila ML09-119	206	206	1288394
strain	Rothia mucilaginosa DY-18	195	195	680646
strain	Streptococcus oralis Uo5	189	189	927666
strain	Helicobacter cetorum MIT 99-5656	178	178	1163745
strain	Streptococcus mitis B6	177	177	365659
strain	Pseudomonas syringae pv. phaseolicola 1448A	166	166	264730
strain	Mycoplasma ovis str. Michigan	145	145	1415773
strain	Haemophilus parainfluenzae T3T1	143	143	862965
strain	Sulfolobus islandicus M.16.27	137	137	427318
strain	Methylobacterium radiotolerans JCM 2831	124	124	426355
strain	Lactobacillus rhamnosus GG	120	120	568703
strain	Haemophilus influenzae KR494	104	104	1334187
strain	Borrelia duttonii Ly	103	103	412419
strain	Lactobacillus rhamnosus LOCK900	101	101	1316933
strain	Rhodopseudomonas palustris BisB5	97	97	316057
strain	Haemophilus influenzae PittEE	95	95	374930
strain	Streptococcus pseudopneumoniae IS7493	87	87	1054460
strain	Mycoplasma hyopneumoniae 7422	86	86	754503
strain	Haemophilus influenzae R2846	85	85	262727
strain	Neisseria lactamica 020-06	80	80	489653
strain	Bacillus infantis NRRL B-14911	74	74	1367477
strain	Haemophilus influenzae PittGG	72	72	374931
strain	Haemophilus influenzae 10810	71	71	862964
strain	Veillonella parvula DSM 2008	70	70	479436
strain	Serratia marcescens WW4	68	68	435998
strain	Escherichia coli O157:H7 str. EC4115	65	65	444450
strain	Borrelia valaisiana VS116	65	65	445987
strain	Dickeya dadantii 3937	64	64	198628
strain	Enterococcus faecalis V583	62	62	226185
strain	Proteus mirabilis BB2000	60	60	1266738
strain	Borrelia crocidurae str. Achema	59	59	1155096
strain	Bacteroides helcogenes P 36-108	57	57	693979
strain	Streptococcus salivarius JIM8777	57	57	347253
strain	Haemophilus influenzae R2866	50	50	262728
strain	Mycoplasma hyorhinis HUB-1	50	50	872331
strain	Haemophilus somnus 129PT	47	47	205914
strain	Fusobacterium nucleatum subsp. vincentii 3_1_36A2	46	46	469604
strain	Morganella morganii subsp. morganii KT	45	45	1124991
strain	Haemophilus influenzae F3047	45	45	935897
strain	Mycoplasma hyopneumoniae 232	45	45	295358
strain	Streptococcus salivarius 57.I	44	44	1046629
strain	Helicobacter pylori B38	43	43	592205
strain	Beijerinckia indica subsp. indica ATCC 9039	42	42	395963
strain	Streptococcus gordonii str. Challis substr. CH1	42	42	467705
strain	Streptococcus oligofermentans AS 1.3089	41	41	1302863
strain	Prevotella sp. oral taxon 299 str. F0039	40	40	575614
strain	Streptococcus sanguinis SK36	40	40	388919
strain	Lactobacillus gasseri ATCC 33323	39	39	324831
strain	Corynebacterium resistens DSM 45100	38	38	662755
strain	Prevotella denticola F0289	37	37	767031
strain	Proteus mirabilis HI4320	37	37	529507
strain	Haemophilus influenzae F3031	35	35	866630
strain	Haliangium ochraceum DSM 14365	35	35	502025
strain	Serratia plymuthica S13	32	32	1348660
strain	Buchnera aphidicola BCc	30	30	372461
strain	Neisseria meningitidis serogroup C	30	3	135720
strain	Enterobacter cloacae subsp. cloacae NCTC 9394	30	30	718254
strain	Fusobacterium nucleatum subsp. animalis 4_8	30	30	469607
strain	Xanthomonas campestris pv. raphani 756C	29	29	990315
strain	Oscillatoria acuminata PCC 6304	28	28	56110
strain	Haemophilus influenzae Rd KW20	27	27	71421
strain	Streptococcus agalactiae 2603V/R	27	27	208435
strain	Rickettsia africae ESF-5	27	27	347255
strain	Natronococcus occultus SP4	25	25	694430
strain	Stenotrophomonas maltophilia K279a	24	24	522373
strain	Prevotella intermedia 17	23	23	246198
strain	Filifactor alocis ATCC 35896	22	22	546269
strain	Paenibacillus mucilaginosus K02	22	22	997761
strain	Halovivax ruber XH-70	22	22	797302
strain	Corynebacterium diphtheriae PW8	21	21	698964
strain	Yersinia enterocolitica subsp. palearctica 105.5R(r)	21	21	994476
strain	Rothia dentocariosa ATCC 17931	20	20	762948
strain	Geobacillus thermoleovorans CCB_US3_UF5	20	20	1111068
strain	Klebsiella pneumoniae CG43	19	19	1244085
strain	Roseburia hominis A2-183	19	19	585394
strain	Lactobacillus sanfranciscensis TMW 1.1304	18	18	714313
strain	Treponema pedis str. T A4	18	18	1291379
strain	Mycoplasma hyorhinis SK76	18	18	1118964
strain	Streptococcus salivarius CCHSS3	17	17	1048332
strain	Pseudomonas fluorescens A506	16	16	1037911
strain	Streptococcus anginosus C1051	16	16	862970
strain	Candidatus Liberibacter americanus str. Sao Paulo	16	16	1261131
strain	Staphylococcus haemolyticus JCSC1435	16	16	279808
strain	Treponema denticola ATCC 35405	15	15	243275
strain	Atopobium parvulum DSM 20469	15	15	521095
strain	Staphylococcus epidermidis ATCC 12228	15	15	176280
strain	Providencia stuartii MRSN 2154	15	15	1157951
strain	Finegoldia magna ATCC 29328	15	15	334413
strain	Methanosarcina barkeri str. Fusaro	15	15	269797
strain	Neisseria gonorrhoeae TCDC-NG08107	15	15	940296
strain	Staphylococcus epidermidis RP62A	14	14	176279
strain	Corynebacterium callunae DSM 20147	14	14	1121353
strain	Acinetobacter baumannii 1656-2	13	13	696749
strain	Stenotrophomonas maltophilia D457	13	13	1163399
strain	Pseudoxanthomonas spadix BD-a59	13	13	1045855
strain	Burkholderia mallei NCTC 10247	13	13	320389
strain	Acinetobacter baumannii MDR-TJ	13	13	889738
strain	Candidatus Hodgkinia cicadicola Dsem	13	13	573234
strain	Streptococcus pneumoniae Hungary19A-6	13	13	487214
strain	Enterococcus faecalis 62	13	13	936153
strain	Neisseria meningitidis alpha14	13	13	662598
strain	Sinorhizobium fredii NGR234	12	12	394
strain	Neisseria meningitidis G2136	12	12	935599
strain	Streptococcus anginosus C238	12	12	862971
strain	Pyrolobus fumarii 1A	12	12	694429
strain	Candidatus Sulcia muelleri GWSS	11	11	444179
strain	Sorangium cellulosum So0157-2	11	11	1254432
strain	Oscillatoria nigro-viridis PCC 7112	11	11	179408
strain	Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2	11	11	511995
strain	Pseudomonas fluorescens SBW25	11	11	216595
strain	Psychromonas ingrahamii 37	11	11	357804
strain	Mycoplasma genitalium M6282	11	11	662946
strain	Mycoplasma suis str. Illinois	11	11	768700
strain	Capnocytophaga ochracea DSM 7271	11	11	521097
strain	Mycoplasma hyopneumoniae 168	11	4	907287
strain	Klebsiella pneumoniae subsp. pneumoniae MGH 78578	10	10	272620
strain	Nitrobacter hamburgensis X14	10	10	323097
strain	Molluscum contagiosum virus subtype 1	10	10	10280
strain	Klebsiella pneumoniae 342	10	10	507522
strain	Tannerella forsythia ATCC 43037	10	10	203275
strain	Methanobrevibacter smithii ATCC 35061	10	10	420247
strain	Neisseria meningitidis 8013	10	10	604162
strain	Neisseria meningitidis serogroup B	9	5	491
strain	Neisseria meningitidis 053442	9	9	374833
strain	Pseudomonas aeruginosa PA7	9	9	381754
strain	Mycoplasma cynos C142	9	9	1246955
strain	Aggregatibacter aphrophilus NJ8700	9	9	634176
strain	Parachlamydia acanthamoebae UV-7	9	9	765952
strain	Xanthomonas campestris pv. campestris	9	2	340
strain	Lactobacillus ruminis ATCC 27782	9	9	1069534
strain	Prevotella dentalis DSM 3688	8	8	908937
strain	Neisseria meningitidis M01-240355	8	8	935588
strain	Neisseria gonorrhoeae NCCP11945	8	8	521006
strain	Corynebacterium jeikeium K411	8	8	306537
strain	Neisseria meningitidis FAM18	8	8	272831
strain	Leptotrichia buccalis C-1013-b	8	8	523794
strain	Burkholderia mallei NCTC 10229	8	8	412022
strain	Pseudomonas putida DOT-T1E	8	8	1196325
strain	Neisseria meningitidis WUE 2594	8	8	942513
strain	Acinetobacter baumannii ACICU	8	8	405416
strain	Escherichia coli UMN026	8	8	585056
strain	Rhizobium leguminosarum bv. viciae 3841	8	8	216596
strain	Xanthomonas campestris pv. campestris str. B100	7	7	509169
strain	Stenotrophomonas maltophilia JV3	7	7	868597
strain	Caldicellulosiruptor saccharolyticus DSM 8903	7	7	351627
strain	Thermodesulfobacterium geofontis OPF15	7	7	795359
strain	Microcystis aeruginosa NIES-843	7	7	449447
strain	Mycoplasma hyopneumoniae 168-L	7	7	1116211
strain	Bacteroides fragilis YCH46	7	7	295405
strain	Fusobacterium nucleatum subsp. nucleatum ATCC 25586	7	7	190304
strain	Mesotoga prima MesG1.Ag.4.2	7	7	660470
strain	Pseudomonas aeruginosa MTB-1	7	7	1415629
strain	Methanobrevibacter ruminantium M1	7	7	634498
strain	Neisseria meningitidis M04-240196	6	6	935593
strain	Yersinia pseudotuberculosis IP 31758	6	6	349747
strain	Mannheimia haemolytica USDA-ARS-USMARC-185	6	6	1249526
strain	Methylobacterium nodulans ORS 2060	6	6	460265
strain	Stigmatella aurantiaca DW4/3-1	6	6	378806
strain	Acinetobacter baumannii ATCC 17978	6	6	400667
strain	Tropheryma whipplei TW08/27	6	6	218496
strain	Eggerthella lenta DSM 2243	6	6	479437
strain	Achromobacter xylosoxidans NH44784-1996	6	6	1167634
strain	Streptococcus pneumoniae ATCC 700669	6	6	561276
strain	Bacteroides fragilis 638R	6	6	862962
strain	Sorangium cellulosum So ce56	6	6	448385
strain	Klebsiella pneumoniae KCTC 2242	5	5	1049565
strain	Herbaspirillum seropedicae SmR1	5	5	757424
strain	Citrobacter koseri ATCC BAA-895	5	5	290338
strain	Corynebacterium urealyticum DSM 7109	5	5	504474
strain	Pelobacter propionicus DSM 2379	5	5	338966
strain	Pseudomonas brassicacearum subsp. brassicacearum NFM421	5	5	994484
strain	Enterobacter cloacae subsp. cloacae ENHKU01	5	5	1211025
strain	Escherichia coli 042	5	5	216592
strain	Pseudomonas aeruginosa NCGM2.S1	5	5	1089456
strain	Streptococcus pneumoniae G54	5	5	512566
strain	Yersinia pseudotuberculosis YPIII	5	5	502800
strain	Streptococcus intermedius JTH08	5	5	591365
strain	Streptococcus pneumoniae INV200	5	5	869216
strain	Mycoplasma pulmonis UAB CTIP	4	4	272635
strain	Neisseria meningitidis alpha710	4	4	630588
strain	Bacteroides fragilis NCTC 9343	4	4	272559
strain	Bradyrhizobium oligotrophicum S58	4	4	1245469
strain	Corynebacterium diphtheriae BH8	4	4	698973
strain	Pseudomonas aeruginosa PAO1	4	4	208964
strain	Mycoplasma conjunctivae HRC/581	4	4	572263
strain	Bacillus thuringiensis YBT-1518	4	4	529122
strain	Streptococcus pneumoniae SPNA45	4	4	869309
strain	Methanococcus aeolicus Nankai-3	4	4	419665
strain	Geobacter uraniireducens Rf4	4	4	351605
strain	Acinetobacter baumannii BJAB0715	4	4	1096996
strain	Enterococcus faecalis str. Symbioflor 1	4	4	1261557
strain	Methanothermus fervidus DSM 2088	4	4	523846
strain	Helicobacter pylori J99	4	4	85963
strain	Corynebacterium maris DSM 45190	4	4	1224163
strain	Escherichia coli SE15	4	4	431946
strain	Streptococcus intermedius B196	4	4	862967
strain	Burkholderia pseudomallei 668	4	4	320373
strain	Lactobacillus sakei subsp. sakei 23K	4	4	314315
strain	Enterobacter lignolyticus SCF1	3	3	701347
strain	Chamaesiphon minutus PCC 6605	3	3	1173020
strain	Alistipes shahii WAL 8301	3	3	717959
strain	Mobiluncus curtisii ATCC 43063	3	3	548479
strain	Mycoplasma gallisepticum str. R	3	3	233150
strain	Pseudomonas syringae pv. syringae B728a	3	3	205918
strain	Campylobacter hominis ATCC BAA-381	3	3	360107
strain	Escherichia coli SMS-3-5	3	3	439855
strain	Neisseria meningitidis NZ-05/33	3	3	935589
strain	Escherichia coli ETEC H10407	3	3	316401
strain	Mycoplasma hyorhinis MCLD	3	3	936139
strain	Stenotrophomonas maltophilia R551-3	3	3	391008
strain	Microlunatus phosphovorus NM-1	3	3	1032480
strain	Bdellovibrio bacteriovorus HD100	3	3	264462
strain	Thermoanaerobacter wiegelii Rt8.B1	3	3	697303
strain	Haloquadratum walsbyi DSM 16790	3	3	362976
strain	Staphylococcus aureus subsp. aureus USA300	3	3	367830
strain	Staphylococcus aureus subsp. aureus HO 5096 0412	3	3	1074252
strain	Anabaena cylindrica PCC 7122	3	3	272123
strain	Streptomyces cattleya NRRL 8057 = DSM 46488	3	3	1003195
strain	Streptomyces venezuelae ATCC 10712	3	3	953739
strain	Cellulophaga algicola DSM 14237	3	3	688270
strain	Caldicellulosiruptor kronotskyensis 2002	3	3	632348
strain	Pandoraea pnomenusa 3kgm	3	3	1416914
strain	Streptococcus pneumoniae 670-6B	3	3	189423
strain	Arthrospira platensis NIES-39	3	3	696747
strain	Streptococcus dysgalactiae subsp. equisimilis RE378	3	3	617121
strain	Xanthomonas campestris pv. vesicatoria str. 85-10	3	3	316273
strain	Haemophilus somnus 2336	3	3	228400
strain	Neisseria gonorrhoeae FA 1090	3	3	242231
strain	Cryptobacterium curtum DSM 15641	3	3	469378
strain	Calothrix sp. PCC 6303	3	3	1170562
strain	Clostridium difficile 630	3	3	272563
strain	Streptococcus pneumoniae JJA	3	3	488222
strain	Bacillus cereus E33L	3	3	288681
strain	Porphyromonas gingivalis TDC60	2	2	1030843
strain	Natranaerobius thermophilus JW/NM-WN-LF	2	2	457570
strain	Streptococcus pneumoniae A026	2	2	1408179
strain	Mycoplasma wenyonii str. Massachusetts	2	2	1197325
strain	Escherichia coli APEC O1	2	2	405955
strain	Macrococcus caseolyticus JCSC5402	2	2	458233
strain	Leptospira interrogans serovar Lai str. 56601	2	2	189518
strain	Enterococcus faecalis D32	2	2	1206105
strain	Acinetobacter baumannii AYE	2	2	509173
strain	Lactobacillus buchneri CD034	2	2	1071400
strain	Neisseria meningitidis M01-240149	2	2	935591
strain	Treponema succinifaciens DSM 2489	2	2	869209
strain	Acidiphilium multivorum AIU301	2	2	926570
strain	Leuconostoc mesenteroides subsp. mesenteroides J18	2	2	1107880
strain	Mycoplasma gallisepticum S6	2	2	1006581
strain	Ralstonia pickettii 12D	2	2	428406
strain	Corynebacterium diphtheriae HC02	2	2	698968
strain	Neisseria meningitidis Z2491	2	2	122587
strain	Enterobacter cloacae subsp. dissolvens SDM	2	2	1104326
strain	Streptococcus intermedius C270	2	2	862966
strain	Burkholderia xenovorans LB400	2	2	266265
strain	Escherichia coli P12b	2	2	910348
strain	Prevotella ruminicola 23	2	2	264731
strain	Helicobacter cetorum MIT 00-7128	2	2	182217
strain	Xenorhabdus nematophila ATCC 19061	2	2	406817
strain	Enterobacter cloacae subsp. cloacae ATCC 13047	2	2	716541
strain	Borrelia burgdorferi N40	2	2	521007
strain	Tetragenococcus halophilus NBRC 12172	2	2	945021
strain	Lactobacillus paracasei subsp. paracasei 8700:2	2	2	537973
strain	Ilyobacter polytropus DSM 2926	2	2	572544
strain	Streptosporangium roseum DSM 43021	2	2	479432
strain	Roseburia intestinalis XB6B4	2	2	718255
strain	Trichodesmium erythraeum IMS101	2	2	203124
strain	Kytococcus sedentarius DSM 20547	2	2	478801
strain	Klebsiella pneumoniae subsp. pneumoniae HS11286	2	2	1125630
strain	Terriglobus roseus DSM 18391	2	2	926566
strain	Streptococcus agalactiae NEM316	2	2	211110
strain	Dechloromonas aromatica RCB	2	2	159087
strain	Streptococcus pneumoniae AP200	2	2	574093
strain	Acinetobacter baumannii BJAB07104	2	2	1096995
strain	Thermoanaerobacter tengcongensis MB4	2	2	273068
strain	Croceibacter atlanticus HTCC2559	2	2	216432
strain	Mycoplasma gallisepticum WI01_2001.043-13-2P	2	2	1159201
strain	Methanococcus voltae A3	2	2	456320
strain	Klebsiella pneumoniae JM45	2	2	1380908
strain	Campylobacter coli 15-537360	2	2	1358410
strain	Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum)	2	2	713602
strain	Methylomonas methanica MC09	2	2	857087
strain	Delftia acidovorans SPH-1	2	2	398578
strain	Streptobacillus moniliformis DSM 12112	2	2	519441
strain	Lactobacillus fermentum IFO 3956	2	2	334390
strain	Collimonas fungivorans Ter331	2	2	1005048
strain	Salmonella enterica subsp. enterica serovar Heidelberg str. SL476	2	2	454169
strain	Acinetobacter baumannii D1279779	2	2	945556
strain	Pseudomonas fulva 12-X	2	2	743720
strain	Streptococcus equi subsp. zooepidemicus ATCC 35246	2	2	1051072
strain	Odoribacter splanchnicus DSM 220712	2	2	709991
strain	Leuconostoc citreum KM20	2	2	349519
strain	Campylobacter concisus 13826	2	2	360104
strain	Tolumonas auensis DSM 9187	2	2	595494
strain	Bifidobacterium animalis subsp. lactis ATCC 27673	2	2	1167629
strain	Bordetella avium 197N	2	2	360910
strain	Escherichia coli NA114	2	2	1033813
strain	Methylibium petroleiphilum PM1	2	2	420662
strain	Streptococcus pyogenes MGAS10750	2	2	370554
strain	Lactobacillus casei str. Zhang	2	2	498216
strain	Staphylococcus aureus subsp. aureus ED98	2	2	681288
strain	Streptococcus pneumoniae ST556	2	2	1130804
strain	Cronobacter sakazakii SP291	2	2	956149
strain	Lactobacillus rhamnosus ATCC 8530	2	2	1088720
strain	Lactobacillus johnsonii N6.2	2	2	1408186
strain	Nostoc punctiforme PCC 73102	2	2	63737
strain	Chromobacterium violaceum ATCC 12472	2	2	243365
strain	Pasteurella multocida subsp. multocida str. Pm70	2	2	272843
strain	Xylella fastidiosa M12	2	2	405440
strain	Streptococcus thermophilus MN-ZLW-002	2	2	1187956
strain	Corynebacterium diphtheriae CDCE 8392	2	2	698965
strain	Escherichia coli 536	2	2	362663
strain	Brachyspira murdochii DSM 12563	2	2	526224
strain	Staphylococcus aureus Bmb9393	2	2	1321369
strain	Escherichia coli O55:H7 str. RM12579	2	2	1048689
strain	Streptococcus pneumoniae TCH8431/19A	2	2	525381
strain	Streptococcus pneumoniae P1031	2	2	488223
strain	Enterobacter aerogenes EA1509E	2	2	935296
strain	Lactobacillus reuteri JCM 1112	2	2	557433
strain	Bordetella petrii DSM 12804	2	2	340100
strain	Acinetobacter baumannii SDF	2	2	509170
strain	Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7	2	2	1016998
strain	Methanosarcina acetivorans C2A	2	2	188937
strain	Ruminococcus albus 7	2	2	697329
strain	Enterobacter cloacae EcWSU1	2	2	1045856
strain	Variovorax paradoxus B4	2	2	1246301
strain	Haemophilus parasuis SH0165	1	1	557723
strain	Crinalium epipsammum PCC 9333	1	1	1173022
strain	Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044	1	1	484021
strain	Influenza A virus (A/New York/392/2004(H3N2))	1	1	335341
strain	Gramella forsetii KT0803	1	1	411154
strain	Escherichia coli O127:H6 str. E2348/69	1	1	574521
strain	Aeromonas veronii B565	1	1	998088
strain	Human coronavirus OC43	1	1	31631
strain	Pseudomonas poae RE*1-1-14	1	1	1282356
strain	Cellvibrio japonicus Ueda107	1	1	498211
strain	Streptococcus pyogenes serotype M12	1	1	342023
strain	Helicobacter pylori SJM180	1	1	765962
strain	Vibrio parahaemolyticus RIMD 2210633	1	1	223926
strain	Frateuria aurantia DSM 6220	1	1	767434
strain	Ferrimonas balearica DSM 9799	1	1	550540
strain	Carnobacterium maltaromaticum LMA28	1	1	1234679
strain	Mycobacterium smegmatis str. MC2 155	1	1	246196
strain	Xylella fastidiosa 9a5c	1	1	160492
strain	Phycisphaera mikurensis NBRC 102666	1	1	1142394
strain	Corynebacterium halotolerans YIM 70093 = DSM 44683	1	1	1121362
strain	Brachyspira pilosicoli P43/6/78	1	1	1042417
strain	Mannheimia succiniciproducens MBEL55E	1	1	221988
strain	Streptococcus constellatus subsp. pharyngis C1050	1	1	862969
strain	Edwardsiella ictaluri 93-146	1	1	634503
strain	Tropheryma whipplei str. Twist	1	1	203267
strain	Desulfococcus oleovorans Hxd3	1	1	96561
strain	Pseudomonas mendocina NK-01	1	1	1001585
strain	Variovorax paradoxus S110	1	1	543728
strain	Aleutian mink disease virus	1	1	28314
strain	Corynebacterium argentoratense DSM 44202	1	1	1348662
strain	Corynebacterium diphtheriae INCA 402	1	1	698972
strain	Enterococcus hirae ATCC 9790	1	1	768486
strain	Baumannia cicadellinicola str. Hc (Homalodisca coagulata)	1	1	374463
strain	Mycoplasma arthritidis 158L3-1	1	1	243272
strain	Thermosipho africanus TCF52B	1	1	484019
strain	Pseudomonas mendocina ymp	1	1	399739
strain	Cupriavidus metallidurans CH34	1	1	266264
strain	Desulfurispirillum indicum S5	1	1	653733
strain	Marinomonas mediterranea MMB-1	1	1	717774
strain	Natronobacterium gregoryi SP2	1	1	797304
strain	Streptococcus equi subsp. equi 4047	1	1	553482
strain	Clostridiales genomosp. BVAB3 str. UPII9-5	1	1	699246
strain	Salmonella enterica subsp. enterica serovar Newport	1	1	108619
strain	Albidiferax ferrireducens T118	1	1	338969
strain	Citrobacter rodentium ICC168	1	1	637910
strain	Mycobacterium yongonense 05-1390	1	1	1138871
strain	Bartonella grahamii as4aup	1	1	634504
strain	Corynebacterium efficiens YS-314	1	1	196164
strain	Nocardia farcinica IFM 10152	1	1	247156
strain	Corynebacterium variabile DSM 44702	1	1	858619
strain	Selenomonas sputigena ATCC 35185	1	1	546271
strain	Porphyromonas asaccharolytica DSM 20707	1	1	879243
strain	Thermus scotoductus SA-01	1	1	743525
strain	Chlorobium phaeobacteroides BS1	1	1	331678
strain	Methanoregula boonei 6A8	1	1	456442
strain	Lawsonia intracellularis PHE/MN1-00	1	1	363253
strain	Aster yellows witches'-broom phytoplasma AYWB	1	1	322098
strain	Paenibacillus polymyxa SC2	1	1	886882
strain	Thiocystis violascens DSM 198	1	1	765911
strain	Burkholderia rhizoxinica HKI 454	1	1	882378
strain	Pseudomonas aeruginosa UCBPP-PA14	1	1	208963
strain	Methanosarcina mazei Go1	1	1	192952
strain	Melioribacter roseus P3M-2	1	1	1191523
strain	Chlamydia pecorum W73	1	1	1234368
strain	Pseudomonas stutzeri DSM 10701	1	1	1123519
strain	Methanocorpusculum labreanum Z	1	1	410358
strain	Streptococcus infantarius subsp. infantarius CJ18	1	1	1069533
strain	Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305	1	1	342451
strain	Actinobacillus suis H91-0380	1	1	696748
strain	Serratia proteamaculans 568	1	1	399741
strain	Staphylococcus aureus subsp. aureus JKD6159	1	1	869816
strain	Candidatus Carsonella ruddii PC isolate NHV	1	1	1202540
strain	Chlamydia pecorum P787	1	1	1234369
strain	Mycobacterium canettii CIPT 140070008	1	1	1205675
strain	Ehrlichia canis str. Jake	1	1	269484
strain	Streptomyces scabiei 87.22	1	1	680198
strain	Pseudomonas stutzeri A1501	1	1	379731
strain	Candidatus Carsonella ruddii DC	1	1	667013
strain	Escherichia coli Xuzhou21	1	1	741093
strain	Salmonella enterica subsp. enterica serovar Heidelberg str. 41578	1	1	1124936
strain	Methanothermococcus okinawensis IH1	1	1	647113
strain	Streptococcus pneumoniae 70585	1	1	488221
strain	Prochlorococcus marinus str. MIT 9215	1	1	93060
strain	Haliscomenobacter hydrossis DSM 1100	1	1	760192
strain	Mycobacterium chubuense NBB4	1	1	710421
strain	Acinetobacter calcoaceticus PHEA-2	1	1	871585
strain	Gallibacterium anatis UMN179	1	1	1005058
strain	Mannheimia haemolytica M42548	1	1	1316932
strain	Magnetospirillum gryphiswaldense MSR-1 v2	1	1	1430440
strain	Streptococcus pneumoniae gamPNI0373	1	1	697283
strain	Coxiella burnetii CbuK_Q154	1	1	434924
strain	Nautilia profundicola AmH	1	1	598659
strain	Anaerococcus prevotii DSM 20548	1	1	525919
strain	Hahella chejuensis KCTC 2396	1	1	349521
strain	Flexibacter litoralis DSM 6794	1	1	880071
strain	Agrobacterium fabrum str. C58	1	1	176299
strain	Chlamydia pecorum PV3056/3	1	1	1234367
strain	Cardinium endosymbiont cEper1 of Encarsia pergandiella	1	1	1231626
strain	Streptococcus parauberis KCTC 11537	1	1	936154
strain	Leisingera methylohalidivorans DSM 14336	1	1	999552
no rank	cellular organisms	963042	290	131567
no rank	ssDNA viruses	66837	0	29258
no rank	dsDNA viruses, no RNA stage	4181	6	35237
no rank	ssRNA viruses	34	0	439488
no rank	Shrimp white spot syndrome virus	27	27	92652
no rank	ssRNA negative-strand viruses	17	0	35301
no rank	ssRNA positive-strand viruses, no DNA stage	17	0	35278
no rank	Clostridiales incertae sedis	16	0	538999
no rank	unclassified Siphoviridae	15	2	196894
no rank	unclassified Rhizobiales	13	0	119042
no rank	unclassified Micrococcineae	12	0	577468
no rank	unclassified Ascovirus	11	0	328613
no rank	unclassified Mononegavirales	6	0	644608
no rank	Enterobacteria phage G4 clade	5	0	374842
no rank	unclassified Betabaculovirus	4	0	342107
no rank	unassigned Betaherpesvirinae	3	0	686603
no rank	unclassified Gammaproteobacteria	3	0	118884
no rank	unclassified Burkholderiales	2	0	119065
no rank	unclassified Chlorovirus	2	0	346674
no rank	unclassified Bacteria	2	0	2323
no rank	unclassified Bacteroidetes	1	0	171558
no rank	non-primate mammal papillomaviruses	1	0	333938
no rank	unclassified Alphaproteobacteria	1	0	82117
no rank	unclassified Papillomaviridae	1	0	333774
no rank	Candidatus Baumannia	1	0	198346
no rank	unclassified Clostridiales	1	0	186813
no rank	Bettongia penicillata papillomavirus 1	1	1	759701
no rank	unclassified Enterobacteria phage G4 clade	1	0	512009
unclassified	unclassified	4113810	4113810	0
