LEVEL	TAXA	ROLLUP	ASSIGNED	TAXID
root	root	323136	1512	1
superkingdom	Bacteria	321612	503	2
superkingdom	Viruses	11	0	10239
phylum	Proteobacteria	321097	188	1224
phylum	Firmicutes	10	0	1239
phylum	Cyanobacteria	1	0	1117
phylum	Tenericutes	1	0	544448
class	Gammaproteobacteria	320866	349	1236
class	Betaproteobacteria	41	0	28216
class	Bacilli	10	0	91061
class	Alphaproteobacteria	2	0	28211
class	Mollicutes	1	0	31969
subclass	Oscillatoriophycideae	1	0	1301283
order	Enterobacteriales	320515	0	91347
order	Burkholderiales	41	0	80840
order	Lactobacillales	10	0	186826
order	Pasteurellales	1	0	135625
order	Legionellales	1	0	118969
order	Rickettsiales	1	0	766
order	Caulobacterales	1	0	204458
order	Mycoplasmatales	1	0	2085
order	Chroococcales	1	0	1118
family	Enterobacteriaceae	320515	207168	543
family	Alcaligenaceae	21	0	506
family	Microviridae	11	0	10841
family	Streptococcaceae	10	0	1300
family	Burkholderiaceae	10	0	119060
family	Comamonadaceae	10	0	80864
family	Mycoplasmataceae	1	0	2092
family	Coxiellaceae	1	0	118968
family	Pasteurellaceae	1	0	712
family	Caulobacteraceae	1	0	76892
family	Rickettsiaceae	1	0	775
tribe	Rickettsieae	1	0	33988
genus	Escherichia	113063	3485	561
genus	Shigella	133	12	620
genus	Enterobacter	31	0	547
genus	Salmonella	28	5	590
genus	Citrobacter	22	1	544
genus	Achromobacter	21	0	222
genus	Microvirus	11	0	10842
genus	Streptococcus	10	0	1301
genus	Burkholderia	10	0	32008
genus	Delftia	10	2	80865
genus	Cronobacter	9	2	413496
genus	Klebsiella	7	2	570
genus	Pantoea	7	0	53335
genus	Raoultella	5	0	160674
genus	Erwinia	5	1	551
genus	Serratia	5	1	613
genus	Pectobacterium	4	2	122277
genus	Yersinia	4	2	629
genus	Rahnella	3	2	34037
genus	Dickeya	2	0	204037
genus	Xenorhabdus	2	1	626
genus	Orientia	1	0	69474
genus	Coxiella	1	0	776
genus	Candidatus Moranella	1	0	1048757
genus	Wigglesworthia	1	0	51228
genus	Edwardsiella	1	0	635
genus	Phenylobacterium	1	0	20
genus	Mycoplasma	1	0	2093
genus	Morganella	1	0	581
genus	Candidatus Blochmannia	1	0	203804
genus	Haemophilus	1	0	724
genus	Buchnera	1	0	32199
genus	Cyanobacterium	1	0	102234
genus	Photorhabdus	1	0	29487
species group	Enterobacter cloacae complex	22	2	354276
species group	pseudomallei group	10	0	111527
species	Escherichia coli	109545	108565	562
species	Shigella dysenteriae	37	0	622
species	Escherichia fergusonii	33	0	564
species	Shigella flexneri	31	22	623
species	Shigella sonnei	29	22	624
species	Shigella boydii	24	6	621
species	Achromobacter xylosoxidans	21	0	85698
species	Salmonella enterica	18	1	28901
species	Enterobacter cloacae	16	1	550
species	Citrobacter koseri	14	0	545
species	Enterobacteria phage phiX174 sensu lato	11	11	374840
species	Enterobacteriaceae bacterium strain FGI 57	10	10	693444
species	Streptococcus suis	10	0	1307
species	Burkholderia mallei	10	9	13373
species	Citrobacter rodentium	7	0	67825
species	Salmonella bongori	5	3	54736
species	Delftia acidovorans	5	0	80866
species	Raoultella ornithinolytica	5	0	54291
species	Pantoea vagans	5	0	470934
species	Enterobacter sp. R4-368	5	5	1166130
species	Cronobacter turicensis	4	0	413502
species	Delftia sp. Cs1-4	3	3	742013
species	Erwinia amylovora	3	3	552
species	Enterobacter lignolyticus	3	0	1334193
species	Enterobacter aerogenes	3	2	548
species	Cronobacter sakazakii	3	0	28141
species	Klebsiella pneumoniae	3	2	573
species	Dickeya dadantii	2	0	204038
species	Serratia marcescens	2	0	615
species	Pectobacterium carotovorum	2	0	554
species	Klebsiella oxytoca	2	1	571
species	Photorhabdus luminescens	1	0	29488
species	Cyanobacterium aponinum	1	0	379064
species	Morganella morganii	1	0	582
species	Serratia proteamaculans	1	0	28151
species	Mycoplasma hyopneumoniae	1	0	2099
species	Yersinia pseudotuberculosis	1	0	633
species	Serratia liquefaciens	1	0	614
species	Enterobacter sp. 638	1	1	399742
species	Pantoea ananatis	1	1	553
species	Phenylobacterium zucineum	1	0	284016
species	Candidatus Moranella endobia	1	1	1048758
species	Rahnella aquatilis	1	0	34038
species	Orientia tsutsugamushi	1	1	784
species	Candidatus Blochmannia vafer	1	0	251535
species	Edwardsiella ictaluri	1	0	67780
species	Pantoea sp. At-9b	1	1	592316
species	Erwinia billingiae	1	0	182337
species	Haemophilus influenzae	1	0	727
species	Wigglesworthia glossinidia	1	1	51229
species	Coxiella burnetii	1	0	777
species	Buchnera aphidicola	1	0	9
species	Xenorhabdus bovienii	1	0	40576
species	Enterobacter asburiae	1	0	61645
species	Yersinia enterocolitica	1	0	630
subspecies	Salmonella enterica subsp. enterica	14	8	59201
subspecies	Enterobacter cloacae subsp. cloacae	11	0	336306
subspecies	Salmonella enterica subsp. arizonae	3	0	59203
subspecies	Enterobacter cloacae subsp. dissolvens	2	0	69219
subspecies	Pectobacterium carotovorum subsp. carotovorum	2	0	555
subspecies	Yersinia enterocolitica subsp. enterocolitica	1	0	150052
subspecies	Morganella morganii subsp. morganii	1	0	180434
subspecies	Photorhabdus luminescens subsp. laumondii	1	0	141679
strain	Escherichia coli K-12	788	760	83333
strain	Shigella dysenteriae Sd197	37	37	300267
strain	Escherichia fergusonii ATCC 35469	33	33	585054
strain	Escherichia coli str. K-12 substr. MG1655	26	26	511145
strain	Escherichia coli UMN026	23	23	585056
strain	Escherichia coli SMS-3-5	22	22	439855
strain	Achromobacter xylosoxidans NBRC 15126 = ATCC 27061	21	21	1216976
strain	Escherichia coli O127:H6 str. E2348/69	19	19	574521
strain	Escherichia coli 042	18	18	216592
strain	Citrobacter koseri ATCC BAA-895	14	14	290338
strain	Escherichia coli P12b	13	13	910348
strain	Escherichia coli ETEC H10407	11	11	316401
strain	Shigella boydii Sb227	11	11	300268
strain	Streptococcus suis JS14	10	10	945704
strain	Citrobacter rodentium ICC168	7	7	637910
strain	Shigella boydii CDC 3083-94	7	7	344609
strain	Escherichia coli APEC O78	7	7	1274814
strain	Escherichia coli UMNK88	7	7	696406
strain	Escherichia coli NA114	7	7	1033813
strain	Escherichia coli ATCC 8739	6	6	481805
strain	Shigella sonnei Ss046	6	6	300269
strain	Enterobacter cloacae subsp. cloacae ATCC 13047	6	6	716541
strain	Escherichia coli O111:H- str. 11128	6	6	585396
strain	Shigella flexneri 5 str. 8401	6	6	373384
strain	Escherichia coli 536	6	6	362663
strain	Enterobacter cloacae subsp. cloacae NCTC 9394	5	5	718254
strain	Escherichia coli ED1a	5	5	585397
strain	Delftia acidovorans SPH-1	5	5	398578
strain	Raoultella ornithinolytica B6	5	5	1286170
strain	Escherichia coli O55:H7	5	1	244320
strain	Pantoea vagans C9-1	5	5	712898
strain	Escherichia coli DH1	4	4	536056
strain	Escherichia coli SE11	4	4	409438
strain	Cronobacter turicensis z3032	4	4	693216
strain	Escherichia coli HS	4	4	331112
strain	Salmonella enterica subsp. arizonae serovar 62:z4,z23:- str. RSK2980	3	3	882884
strain	Enterobacter lignolyticus SCF1	3	3	701347
strain	Escherichia coli CFT073	3	3	199310
strain	Escherichia coli O103:H2 str. 12009	3	3	585395
strain	Escherichia coli E24377A	3	3	331111
strain	Escherichia coli IAI1	2	2	585034
strain	Escherichia coli O55:H7 str. CB9615	2	2	701177
strain	Escherichia coli O104:H4	2	1	1038927
strain	Escherichia coli APEC O1	2	2	405955
strain	Shigella flexneri 2002017	2	2	591020
strain	Escherichia coli O26:H11 str. 11368	2	2	573235
strain	Serratia marcescens WW4	2	2	435998
strain	Escherichia coli IAI39	2	2	585057
strain	Escherichia coli O55:H7 str. RM12579	2	2	1048689
strain	Escherichia coli str. K-12 substr. DH10B	2	2	316385
strain	Escherichia coli ABU 83972	2	2	655817
strain	Enterobacter cloacae subsp. dissolvens SDM	2	2	1104326
strain	Enterobacter cloacae EcWSU1	2	2	1045856
strain	Cronobacter sakazakii CMCC 45402	1	1	1401659
strain	Pectobacterium carotovorum subsp. carotovorum PCC21	1	1	1218933
strain	Klebsiella pneumoniae 342	1	1	507522
strain	Shigella flexneri 2a	1	1	42897
strain	Cronobacter sakazakii SP291	1	1	956149
strain	Morganella morganii subsp. morganii KT	1	1	1124991
strain	Escherichia coli B str. REL606	1	1	413997
strain	Escherichia coli Xuzhou21	1	1	741093
strain	Salmonella bongori N268-08	1	1	1197719
strain	Rahnella aquatilis CIP 78.65 = ATCC 33071	1	1	745277
strain	Dickeya dadantii Ech586	1	1	590409
strain	Cronobacter sakazakii ES15	1	1	1138308
strain	Burkholderia mallei NCTC 10229	1	1	412022
strain	Photorhabdus luminescens subsp. laumondii TTO1	1	1	243265
strain	Dickeya dadantii Ech703	1	1	579405
strain	Cyanobacterium aponinum PCC 10605	1	1	755178
strain	Candidatus Blochmannia vafer str. BVAF	1	1	859654
strain	Salmonella enterica subsp. enterica serovar Paratyphi A	1	1	54388
strain	Enterobacter asburiae LF7a	1	1	640513
strain	Phenylobacterium zucineum HLK1	1	1	450851
strain	Serratia liquefaciens ATCC 27592	1	1	1346614
strain	Buchnera aphidicola str. Sg (Schizaphis graminum)	1	1	198804
strain	Salmonella enterica subsp. enterica serovar Typhi	1	1	90370
strain	Yersinia pseudotuberculosis PB1/+	1	1	502801
strain	Escherichia coli O7:K1 str. CE10	1	1	1072459
strain	Haemophilus influenzae R2846	1	1	262727
strain	Klebsiella oxytoca KCTC 1686	1	1	1006551
strain	Coxiella burnetii CbuK_Q154	1	1	434924
strain	Mycoplasma hyopneumoniae J	1	1	262719
strain	Pectobacterium carotovorum subsp. carotovorum PC1	1	1	561230
strain	Serratia proteamaculans 568	1	1	399741
strain	Salmonella bongori NCTC 12419	1	1	218493
strain	Edwardsiella ictaluri 93-146	1	1	634503
strain	Enterobacter aerogenes EA1509E	1	1	935296
strain	Escherichia coli SE15	1	1	431946
strain	Erwinia billingiae Eb661	1	1	634500
strain	Salmonella enterica subsp. enterica serovar Cubana str. CFSAN002050	1	1	1271863
strain	Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1	1	1	936157
strain	Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1	1	1	990282
strain	Escherichia coli O104:H4 str. 2009EL-2071	1	1	1133853
strain	Yersinia enterocolitica subsp. enterocolitica 8081	1	1	393305
strain	Shigella sonnei 53G	1	1	216599
strain	Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91	1	1	550538
strain	Xenorhabdus bovienii SS-2004	1	1	406818
no rank	cellular organisms	321613	1	131567
no rank	ssDNA viruses	11	0	29258
unclassified	unclassified	7990	7990	0
