4de7fe0390bc3309c986857e4f4fd287 *DESCRIPTION
0f8a33c243f5bd216be763184b3d450c *FAQ
e2c62b6381f41bb6d06ba1ab081ab4e4 *NAMESPACE
fabfe818f0e9fa68167fa55d18390d91 *R/AdjustGeneTable.r
31292c155037d4855c3196b5f4710acd *R/AdjustRangeAroundGene.r
68ef9276787d5d00a13f4b94473c8bab *R/AminoAcids.r
28ec8c6f2c70fab1cca095876b3278f9 *R/AnnotateDataframe.r
3caf91ea6514edd8d8506013ee651e0e *R/AnnotateSNPFile.r
197c36493008289b8998985c7a1e687a *R/AnnotateSNPList.r
44f926976cab238f921f84c48f73622d *R/Comp.r
9b7f9379a73c35946f04f6edb3294631 *R/CompareTaxInfo.r
7f87f664c7e8e4bbc69c1dfd3ea2381d *R/ConvertDFToHTML.r
1eb48115890bda6ba0ed0b4a3bc1aea9 *R/ConvertIUPAC.r
0c80445d17e0485633829eee39da4f11 *R/ConvertProtein.r
055011a28f7b8980792847908ff7e213 *R/ConvertPubMedHeadings.r
8a75d5fbeee4a65624b1b4ac97beb73b *R/ConvertURLToExcel.r
b1725159be0d4e776a0393e6977ac0f2 *R/ConvertURLToHTML.r
49f7def05975e23142798549d51f9712 *R/Delay.r
9ba7baa7c8de160c7b3c02e8f2ebc921 *R/DelayUntil.r
36fed5c232d01111feca77502655bd8c *R/DivideString.r
490b0c61b3b69ac4865960ef42c5c719 *R/GenomeSort.r
4ce8970cb31252a33416b9372d798d36 *R/GetARFromLocation.r
ec33dfabf1db708629f2f302bffd95a2 *R/GetClosestGeneInfo.r
6807ea95451672eab4012d915a331c4c *R/GetExpiryDate.r
d2f5fd738a028d2dd94d539d5f8fd2cb *R/GetGOs.r
6db51c7e21cfda07852bbf1bf39ef1a4 *R/GetGeneInfo.r
fbec14da59f46220dfa5e15bb9e4ba76 *R/GetGeneNames.r
4becf45b699597330a2b9c255345e8cc *R/GetGeneTable.r
38e878e9c1b27e26a02055b51c3caee9 *R/GetGenesInRegion.r
6d07a7afc1431024aba276abdcacc875 *R/GetIDs.r
08a207e0e29492060835fd68864c411a *R/GetInteractions.r
1598e7b2dfc5c5fecb504759156a3b7a *R/GetLDInfo.r
9b67a0b384eb888d84febdf1f41b7954 *R/GetNeighGenes.r
37364ed704e2b33ba9bab6042065e43a *R/GetPathways.r
3f533ff7dea736d1ea9e99b49fd60ffb *R/GetPhenotypes.r
dc89915bcaa2afca1ff3291d026d4a58 *R/GetPubMed.r
83da435e894419d14467b02d94c315bd *R/GetPublishedGWAS.r
c2f3ac4537c189f2dac430d558fea47a *R/GetRegion.r
ae39f00b816dc0269a5221b0e1f1ebf0 *R/GetSNPCurrent.r
b4d90daa5183c39f9565937586c5c664 *R/GetSNPFlankSeq.r
4f191d3c0055b16493cb19839386cd14 *R/GetSNPInfo.r
7303981df540294f21dcffe646e2edc3 *R/GetSNPPosHapMap.r
535e26565716fe51a553ba29e20d2727 *R/GetSNPProxyInfo.r
67be290affaf0ce1e4ebff4e7e84a540 *R/GetSNPsInGenes.r
d3417cfec5c2c138a191515077d4e728 *R/GetSNPsInRegion.r
cfe63ca47fb6f8124ffbe3779882abeb *R/GetTable.r
d68964a0a0210499e8560166d7be4dd6 *R/GetTableWithComments.r
202af6d0ceb30929b04bd0f07a14d456 *R/GetTax.r
26d9c2ee3cbb183cb3545a9f35139e1b *R/GetTaxInfo.r
d9ef02a86afa6216667888dcd16ac958 *R/GetUniSTSFromName.r
f85d483f7e93b544572b7759adac3b34 *R/GetUniSTSInfo.r
7c03e26fc58fb350cce0953f5c8fc87c *R/GetUniSTSSpecies.r
7e5ceb7500425abcbdb2df77a9338a8d *R/IUPAC.r
706b4fabd8f7c583633b2bf838b291bc *R/MakeExcel.r
d7c5f80f6cc72a5e7b28f341f0ad26c1 *R/MakeHTML.r
d671dc39864c8cf5081ef1ed37a0d7e5 *R/MedlineAbbreviations.r
3803c64732b87a76acf98e82b15ffd95 *R/MergeSNPsGenes.r
9d30d2ed2c4b16bd4297948f33fd9d62 *R/NatureJobs.r
ca9b95fd78c81a386506716bafe93496 *R/OpenPDF.r
c3090b6bfe1de3f56ebbc3b0aad95934 *R/OpenPMID.r
edc4ab650e21b6e742774c5f0172ad3b *R/OpenURL.r
c3c7f75a30b097022fe88a6b29e1248d *R/PrintFilters.r
4fe15e5bfc626c63a5571b75c1be7f5a *R/PrintNCBI2RInfo.r
c1d36a71f50ca04358a7102f5cc5943a *R/PrintNCBI2ROptions.r
1c02e44883c6d5ff1fe19b608f3979c2 *R/RemoveSpaces.r
a72a5e31dc944ca8b3c4f7b647eac334 *R/Rev.r
6c0c7a022b44e4e6d49518eb5e488916 *R/RevComp.r
876ffa141baf402283ef888ad4fa83c9 *R/ScanForGenes.FindSNPPositions.r
480e30f01d3c37320953f5405060beb4 *R/ScanForGenes.WithSNPPositions.r
579085aba206fad762ea40e5eccd049f *R/ScanForGenes.r
af1476fda9cc40f759ecc8ce9fff667d *R/ScanForSNPs.FindSNPPositions.r
65f0390392eb73dbf7a65e75e4c90e27 *R/ScanForSNPs.WithSNPPositions.r
bd85dc6d2fde7298b0af2048a3c08588 *R/ScanForSNPs.r
6df93042e3b10191e495d82620fb8fc4 *R/SortByChr.r
67922287d47aa45eb86a34c46f1880e6 *R/SplitGenes.r
bf44aeb1bdf060ec0bda9cf2b5aef342 *R/UpdateCheck.r
7c6885034a60553ed5357335b9eb39af *R/VisualiseRegion.r
08a35a5c5cc60cc138a3f023e1e898d7 *R/add.column.r
486f5496c1e3ff6440826b037881f19d *R/add.lead.zero.r
132b144923c213d12b21d31f5eb16b17 *R/alignsData.r
3668a7d5d0509211836bf02d753e4ba0 *R/change.class.data.frame.r
6708afa697f0547cbfe71a698241f2ab *R/check.IUPAC.r
5e730a001d9f4120e57a8df6f9406e62 *R/check.batchsize.r
4410a47ee19ec7f2c847d1499fefa9be *R/check.package.r
784f99746ee9093e8388945bfd822006 *R/check.platform.or.test.r
bc22a09bf3c8e12afc874f8f648500d2 *R/checkAllNumerics.r
42bd2fb3a3940c28d74e41b8ed015755 *R/checkSNPsAllrs.r
ab72f2a34fc9f7cf2251914150d8dbaa *R/clean.NAs.r
fe6e548365c691808b414f3b2b767ac4 *R/clean.r
b170a9aced580f8842dd6116b30dc95b *R/clean.xml.r
003918e90104959c3c70651fc06bc8c4 *R/cleanACGT.r
b8bc9b23f8e4610ac725bfae7dcd8088 *R/cleanframe.r
a3f37b44c1e96ef740e06a3602126413 *R/columnStripper.r
886575c6fe6512233657677734f84b2d *R/compress.df.r
47f46f3e760d5168c603843347ae28d4 *R/convert.go.r
0baa822a11c05360c6684ca5ea88e5d3 *R/convert.int.r
a5b51efe326a6fbe10d7215d7a2db3a1 *R/convert.protein.a.r
f5073ac93e813389a3c7df7a75486235 *R/createframe.r
e6f367e396d8252f630e89c49686d617 *R/cutter.r
a591ab76bcb6befc1d8a892a3868bbbb *R/delayInc.r
61e6306e1d10a48f3f88196f98f97e74 *R/emailAlert.r
702a64b8bdb6e444c51e5d6fd140fff6 *R/excel.FIND.r
9a3cffa0ccb1dae1580eba4195c74cad *R/excel.LEFT.r
d0e4eeaa57d4b6deba3ac76fab742ae8 *R/excel.MID.r
2cc1091a05cb742bd7d9962f0d90b7c0 *R/excel.RIGHT.r
01627bd7e2d43afbec220653f03ed7ef *R/ext.f.tags.r
056a3245dbdc36dca9654ccb0d292911 *R/extract.genenames.from.genetabletxt.r
b0044ffe57f09a4fa93e39e762e4b944 *R/finder.r
9496689504e244ce4afe066a2512d328 *R/get.file.r
733ae6e0fa1cefde1af91244ca1afa81 *R/get.gene.docset.r
227de99a518ad822bfe84ac0c6224bff *R/get.go.int.r
ca1b1c7c5e49cc250cb79f16f555cbda *R/get.int.int.r
d6106d57b33869799408ec0cd6aa7f5e *R/get.pathways.int.r
4991029480f711485923c3a640a184bd *R/get.phenotypes.int.r
0089d226177973b4cb5000774e016f0c *R/get.uni.sts.create.mappingdf.from.chunk.r
603f3ecb200fe9bffc3af7a676e1590f *R/get.uni.sts.info.check.r
e6ea7594221f3fb58f7e0edc8ecd9c15 *R/get.uni.sts.info.cross.ref.available.r
738dd37eeee298c8d86b1ae917247bd6 *R/get.uni.sts.info.cross.ref.r
82bc2169e59a6a3f3427ac24fa9259d7 *R/get.uni.sts.info.map.r
95cecff234068ab1dd8d2da8edc72cd9 *R/get.uni.sts.info.map.wrap.r
3e846aca264a080c40f09384c9cc3b4f *R/getListFromXML.r
b0917077032619bc80656e96faa36a67 *R/getSNPInfo.cleaning.r
ef5159480209dd696172be82421a74d5 *R/getSNPInfo.master.docset.r
8ae415f41441305abc641f86ab1f4519 *R/getSNPInfo.master.xml.r
248ea5ab17f09f8798d3b6cc95d8e719 *R/getSNPInfo.singlebatch.trimmednames.docset.r
29d2e40f0b14c5da9a0b5899fade30b7 *R/getSNPInfo.singlebatch.trimmednames.xml.r
7a3e0486979e2f648fa39acea981264a *R/make.local.HTML.r
3be84b0dccb3bac2028fc655c49d9ae1 *R/make.log.r
32e7793afb5a1c3b63da9eb2507e2886 *R/move.column.r
88bb92b0070784393c5e0803e410e0ee *R/ncbi2r.options.default.r
b8f94dbb74fed9440e82b8c8d38f57c4 *R/ncbi2r.options.r
ed24bac318707437b179f7f3f30bfb04 *R/order.to.original.snplist.r
560d27d3fac2af95b2d12741630bb6d8 *R/parse.chunk.r
9dad0ca2bde26e77ddb1765cf311dd73 *R/parse.items.r
6b2c670d79a14409d354aa18f1f2dc81 *R/parseSNPIDLine.r
68ee8564299160f549d87d1f35dc5707 *R/plotExons.r
189171577b074a0508f80e185c904f56 *R/pn.r
7bc964273846125f906d7699671aceb4 *R/process.gene.table.int.old.r
146ab169f5f13f2db52b16ffa79caa4c *R/process.gene.table.int.r
8a523596d6535cdf7ad7037ff7186e67 *R/processCombinedResults.r
fa1ae6f3e912f29199e5cb9c06897e84 *R/randomSNP.r
2dcf3c86e88965d31627df12bb8353b7 *R/rbind.with.diffnames.r
ba0cb9dd94b8cf724e3b191d620636e8 *R/searcher.r
a8cad48ff1fc8c2e1180b741614b0f7c *R/set.create.dir.r
e6dac39f299c7aa3bf806277678b32d3 *R/showMessages.r
f9415580aae0f6d294ced0bedfda7eed *R/skimUntil.r
8397029d70f2e6aefe9e065569589482 *R/splitfirst.r
9825964a30126fb8b9a18255e3914ca8 *R/strsplitdbl.r
516006c9279afa1edd9e9afdbdfdf32a *R/swap.columns.r
ffd2b3ed6bb3c94046de0e3f7225eb3d *R/swap.rows.r
1f684e00ae4cfd4c9635e2a17a815643 *R/tryScan.r
8fc339c520028ee2113bcf2e1891e298 *R/updateCheck.int.r
02487f56759108f2f577f040c221026a *R/updateCheckWrapper.r
7f8cd884df323226241830d76c14e219 *R/urlCreator.r
7dd0d0cb827b8019eef2ff24e09156c4 *R/vcheck.r
c2524513860190bfb8d8b16a3074cca7 *R/zzz.r
ec07992274615cce5e999990469b3919 *TODO
0ba967d8ec73acbd511fd20fd82b8fd7 *data/datalist
74fd7aaba0928ec114d7a4d1bf8bbacc *data/gwas.rda
cfe28464c46ba7a7bb087de81ac27c16 *demo/00Index
1d6f73e95b110d26523fdd79eb5cc285 *demo/genedemo.r
65904e5f9b921ba3cb25286515994605 *demo/snpdemo.r
95a53516463968696a1904482c84c309 *man/AdjustRangeAroundGene.Rd
92d49fe4600bb24e3f8ee3f09f4b2ee4 *man/AminoAcids.rd
ceae781ee89e477924f44ee749a5d99c *man/AnnotateDataframe.Rd
0cc7cdb0b92f6e91421b349e0366ee43 *man/AnnotateSNPFile.Rd
047e04fec5a85cdeb4ccb739ea76a508 *man/AnnotateSNPList.Rd
967e55af2e8bd817bf858c59eb323d0a *man/Comp.Rd
8ea07c70c4dc8d348b54e98c1a8e19c9 *man/CompareTaxInfo.Rd
af005f926f81e96b34b29365a49413db *man/ConvertIUPAC.rd
89e122be5d9ddd91b1c62940f0e1f4fb *man/ConvertProtein.rd
c9f8a62a013c56f535a3d03f2d2d7acc *man/ConvertPubMedHeadings.rd
607e3574840b4a4ca48ff13950d7cec2 *man/Delay.rd
99a9285db2656bd7a307a61f73597118 *man/DelayUntil.rd
f094c608c087b49a0e2bd38d480affd2 *man/DivideString.Rd
ea13ee71231a0fc99f4e6322e9b46d3d *man/GenomeSort.Rd
8992685912867488e875c7b70a8518f1 *man/GetARFromLocation.Rd
be0d493dffcdb533ebe17e598b3cd8b4 *man/GetClosestGeneInfo.Rd
2a0b1b685c4da84ccf6a17c4846d246a *man/GetGOs.Rd
ae55a7c5a4e78d1817582411f66b6491 *man/GetGeneInfo.Rd
0051a8d1012234d2c18208259779cd21 *man/GetGeneNames.Rd
6ae215c43e5da26765c1883fb044d388 *man/GetGeneTable.Rd
52f788e649390c185eda708be008b976 *man/GetGenesInRegion.Rd
cc10799ee6baba4a786540ff81b9caca *man/GetIDs.Rd
1be2694d67051b0834ed05ebec3c79bd *man/GetInteractions.Rd
5efe362cc4c29d8220197f30a9d9b08e *man/GetLDInfo.Rd
107c61a71b4ba3f283a696d621fe9e70 *man/GetNeighGenes.Rd
5ae546d90c4fb888465dfa6fda0c0e97 *man/GetPathways.Rd
cc7ef2ac7d26ba2278d7461c459adb2c *man/GetPhenotypes.Rd
8a85718e7939403d7f57f9f4df739a33 *man/GetPubMed.Rd
8197c2dc1c451bd7a90c94176d23e9cf *man/GetPublishedGWAS.Rd
5f9f4472ed01334ca92e911e24902d78 *man/GetRegion.Rd
d177ed9aa1327b82a455bf78bc249497 *man/GetSNPFlankSeq.rd
66034b5ae3274bff8bfaa4c0947f69d1 *man/GetSNPInfo.Rd
4e85195d2282d6600bc5f5eeffee2cfe *man/GetSNPPosHapMap.Rd
f328817a9faa410fe39fe9b9905fafd6 *man/GetSNPProxyInfo.Rd
a5161590dd24078aed453a83367abf04 *man/GetSNPsInGenes.Rd
ff7bfc9b7f30efbd7d9fe550367f0054 *man/GetSNPsInRegion.Rd
f6e5c7c88ac1f783531e32641336d71f *man/GetTax.Rd
f378058f70e130dd7cf5c4cebc279a5e *man/GetTaxInfo.Rd
72be9c8a267919de42486fb9f683ddf2 *man/GetUniSTSFromName.rd
d795fbaa3983076101842e8951218c00 *man/GetUniSTSInfo.rd
b5da09199db41b403a3835448138d074 *man/GetUniSTSSpecies.rd
c7764e857e1cf2514757fa9d226f4128 *man/IUPAC.rd
1c8e13ba4d80ef156edd4c235bf04907 *man/MakeExcel.Rd
502cb9b06c9e6dcee7916f8ac96d3385 *man/MakeHTML.Rd
266a012eede5650886e359ea27533992 *man/MedlineAbbreviations.rd
f8d14033a632aca718e41eb61ac78e83 *man/MergeSNPsGenes.Rd
cbddc37efe9ff69ffdc781e4603e6d63 *man/NatureJobs.Rd
08d771f492e3d84f13ab3a320bb5e594 *man/OpenPDF.Rd
c983202829d045b4723e9f1691d42b36 *man/OpenPMID.Rd
e27cdcefd000229ca79d37b99811d71f *man/OpenURL.Rd
ee141c2106c281b7acd509eda16c9bdb *man/PrintFilters.Rd
77c2e7fa7c39b1652878bf7f5c76a1a4 *man/PrintNCBI2RInfo.rd
7d08dc61a568d08c225e539a4e78ed19 *man/PrintNCBI2ROptions.rd
ec705c35cc175a05b006be9a0368c762 *man/RemoveSpaces.rd
9fcc135806f27d0cc496256bf058f78c *man/Rev.rd
57ee9ff4fc1aa81417954f3174a4b39d *man/RevComp.rd
b2bcd58c681cd7b2d9a263f7f7e7ad0d *man/ScanForGenes.Rd
ec95c77cad1482733e27c5ab7aa28aea *man/ScanForSNPs.Rd
1f99b424b901ff6f9f749d922cc54a87 *man/SplitGenes.rd
5bdb74409f32698e3e78cf38db8aadd6 *man/UpdateCheck.rd
b868cdf5c93d0c610336c07b16927b7c *man/VisualiseRegion.Rd
8beccd2db4a0616c4569bbbd690410c2 *man/gwas.Rd
