ea262e2cf8e260e5d25a3172f9e754c2 *DESCRIPTION
702aedaa9e2360be1ce7e375ac038cca *NAMESPACE
2ba5652678ecb447e1c887f7ebc3db08 *R/ASKAT.region.R
4405be6423459d5943e0873ad73d5d3b *R/Estim.H0.ASKAT.R
40392000774bc18edd423ac9291d8f07 *R/Estim.H0.NormalizedASKAT.R
9b33d24d282ba4f1fdcfa560b8eea397 *R/Estim.H0.VCC.R
3bca86013ba88f39af97b1181b83992b *R/Get.G.R
5aaf7feb76b7fa8dac650b0bfb3f1a77 *R/GetRelMatrix.R
2f716b603ce70f3a14f629d3e32d60d7 *R/Neg.LogLikelihood.ASKAT.R
5c2a98e5d1186ac0f66510e321ea0907 *R/Neg.LogLikelihood.VC.C1.R
fdccb491b6117b6b4bbfcb53dc8ebe5a *R/Normality.test.R
972736ae58f8c6fa600c788488c98f65 *R/NormalizedASKAT.region.R
fb4fffb2d1121996333cc9ee18e90b74 *R/Preparation.VCC.R
25820975bdc76a11e61e1c370e1213d1 *R/Preparation.hap.perm.R
77f99be825047082e77cec085d0aa7c7 *R/RVPedigree-package.R
fc94c5daed59460b6131a70ae9a7db77 *R/RVPedigree.R
7f7fab888d69be5a8fe1283288d9f3f8 *R/VCC1.region.R
05d327d179e8ae23af5913fa1e660796 *R/VCC2.region.R
d3a14c9e02d59227a5c36029ebdefa8b *R/VCC3.region.R
57eb45e2cbecd3d9a9b796b4b0afc5d1 *R/compute.weights.R
75ab4d7f683b994dad5f7f2792effa2f *R/findParentIndices.R
48d8af6654830df49b7e5484f114d885 *R/inputChecks.R
3cb573b313678687bedd69ebc7d5d089 *R/meiose.R
76b742b7b73824135d0ff7be9658b1ab *R/perm.hap.R
87ee474646cd6bfc0a9fda595b7d99dd *R/pvalue.ASKAT.R
093eef338c27fa77d17cbc06a54a2b69 *R/pvalue.NormalizedASKAT.R
45be9bfca0e514b07428f34468573737 *R/pvalue.VCC1.R
b96fff7e3a9e03af30159994ec90db21 *R/pvalue.VCC2.R
ad6e1335ef208305f31277e692018abd *R/pvalue.VCC3.R
8a8820620c8836f2b4de37c8b8b611f4 *R/read.haplo.R
be18e906ed2112327efdfd532dee4598 *R/read.haplo.bedfile.R
6366fbc1402c87f07a1f6265fb9426b3 *R/read.haplo.pedfile.R
d7b72c367dbc7b67fa09553df8fa2fb7 *R/read.haplo.shapeit-haps.R
eab8f52e955cedc3a2a05ea2ad4f5eda *R/read.pedigree.R
9c53083a8404c7d8852d3b49c5fa1f72 *R/readMapFile.R
76ad011b2680a3f02409f38b853a7900 *build/vignette.rds
d45a4a2f3909d7724d189d94f3271081 *inst/CITATION
567759b72483080f1c51d8e9e86d53f5 *inst/doc/vignette.R
4ef509b5a2d41f26d43bbd1ada176b4f *inst/doc/vignette.Rnw
1be5ac99a3e7361ef5ff9bc26692155b *inst/doc/vignette.pdf
bdc60126b5f834f21a65aa1ba7c2419b *inst/extdata/NNormTrait.dat
2cf9d52568390cf9e3fbb2d8281d6300 *inst/extdata/OneFamilyExample.ped
f5d84d2e52f5a2e3e24d0a0e5556cdc9 *inst/extdata/TwoFamilyExample.ped
cbffb961aec68ffeca90f851617dd44d *inst/extdata/covariates.dat
50c7fbac8746006aff572153d04a8841 *inst/extdata/covariates2.dat
435b36de2112996465290e0aa536d800 *inst/extdata/data.map
52b0b07eede7b6d93bb34b2af22ef7b7 *inst/extdata/data.ped
991c1134e5531f15134fd12663f6c7f9 *inst/extdata/data.phe
d3bca2b35470bf5620185985c6e815e0 *inst/extdata/dataB.bed
e7c593436b69eeb4b73e006a212f6972 *inst/extdata/dataB.bim
4de3c46bcfd3f71b7f1bdb2c502b3480 *inst/extdata/dataB.fam
a2abdcc6fc3d9abe56c07b0b58973fea *inst/extdata/dataT.tfam
99c826254f54f7f892d25b4de349e30c *inst/extdata/dataT.tped
aae43f9ef1fd5c96ba3eebefad6cedc5 *inst/extdata/data_nullmorgans.map
5871901cdaa7d4f73613d77d9316a20c *inst/extdata/genes.lst
8143c1299f103a94b537623614b80409 *inst/extdata/genes2.lst
a6420700afb9a52f1fbb345292bedac0 *inst/extdata/gwaa.data.RData
820e93cce901e0decd3f154dc46ddb8f *inst/extdata/kinmat.Rdata
1b0494a4c54d4d7ec0839cfba09f929c *inst/extdata/pheno.dat
29ad932723ebc4c09f7cb297d885f3a9 *inst/extdata/test.bed
80a8ec0a883b29b6c957c3207f7cbcec *inst/extdata/test.bim
5669aa6a0c810ce144f89608ea91c219 *inst/extdata/test.fam
071b0755152e051e8d99bc7a5c94a4c8 *inst/extdata/test.map
1aa267bd26ce1da9f61464b27c3fb4c7 *inst/extdata/test.ped
47defbf8265284edca0ad4dc93c16be1 *man/ASKAT.region.Rd
87b39107768f83cbc525b692d191b64e *man/Estim.H0.ASKAT.Rd
52f8394c685be1969ca846f195e1cdb0 *man/Estim.H0.NormalizedASKAT.Rd
c5d429d420276e1d979e59a502a40693 *man/Estim.H0.VCC.Rd
231e332c7ed8c5f23483a3f7f7aa2186 *man/Get.G.Rd
221a33cc270509c20c9ccaa88cba1263 *man/GetRelMatrix.Rd
0868a65cde083518d22c15b11f4500e5 *man/Normality.test.Rd
96a6f9c7e57bfd341c797fc9b0e9c3ab *man/NormalizedASKAT.region.Rd
27eaf42bf4720515cedcb012e989a772 *man/Preparation.VCC.Rd
45b1306d50f046995205df50b5ce2742 *man/Preparation.hap.perm.Rd
8f7e59e3ec525980117519b57e242f77 *man/RVPedigree-package.Rd
363a06ea0553b88335c57666eb64d865 *man/RVPedigree.Rd
f853d8bade0c4bd6321257e258c29962 *man/VCC1.region.Rd
c70195c6fe9c3114dc4229c759f594c9 *man/VCC2.region.Rd
4e610f069b74fdb40919e8d92730d579 *man/VCC3.region.Rd
83a53b4799bdede61e7b7eb27165b36d *man/compute.weights.Rd
cc63445fbc3fdd0e0daac044d9a39486 *man/perm.hap.Rd
21449824c86e61a1cc6fa5c2b813d320 *man/pvalue.ASKAT.Rd
9375fce5e986dadc2b3af8f2679e5b1b *man/pvalue.NormalizedASKAT.Rd
9b637d44b4784dbbdca368d66db6fd24 *man/pvalue.VCC1.Rd
f08dee3bdd3783107dafd4793f5dccc6 *man/pvalue.VCC2.Rd
8e025884cba604dd45e9b6725628b2cf *man/pvalue.VCC3.Rd
46c04459b4a8e7ede928b01f34a4c843 *man/read.haplo.Rd
90214e343c91cedc961120979d8a0c1c *man/read.haplo.bedfile.Rd
274810179f1b5d44fd1d6b69c9e0f420 *man/read.haplo.pedfile.Rd
c7746e09888b8efdc5d462dd643112bc *man/read.haplo.shapeit_haps.Rd
622689899ed530017640538b5b36fd9c *man/read.pedigree.Rd
7a1878eb867957dab72ad2ec846908b8 *man/readMapFile.Rd
4ef509b5a2d41f26d43bbd1ada176b4f *vignettes/vignette.Rnw
