e8e9c6c907e308f2efe0c4ae7c6c5b97 *DESCRIPTION
195e9ef8075aae5ce1176a2768aba96d *NAMESPACE
de62726a9b2a02768f06cd3d079ca141 *NEWS.md
d78f8edc3eb68d4ad2b34696cc2c2045 *R/AuxFunctions.R
8dd082a29058b82c60b61b802636ec99 *R/PMatrixClass.R
291dcbd0d134ef3dc13e15625b5e81d2 *R/discoversomaticInteractions.R
549bb4a9c6f8110a82e4266422d8df42 *R/getMutex.R
a7ffcebcb37f7d30971a41979f3e6951 *R/getMutexAB.R
f6e5f4b75a420bf9339c7d860bf35b69 *R/getMutexGroup.R
762462371752bbd47ca890e89f205a6c *R/getPM.R
af4346cc5e74d4fd015d034e7dd7a55d *README.md
37d86c968119dc3b895ca942124a70a9 *build/vignette.rds
2b3baeb12b90e50729548fe06bea0249 *data/AMP_COAD.rda
efbd0cfefdff70d714be50072f9f5725 *data/A_Matrix.rda
db0fde74fe10f66ca7342f967edf2ba3 *data/A_example.rda
7fcbefdfc9ae52be9dde4a1ddbda02d6 *data/B_Matrix.rda
7c781b77d87fbcf9eac1f1176f02148e *data/B_example.rda
421171f793da5a2dcad09ddff67ce7b2 *data/PM_AMP_COAD.rda
57050075ef21c6115aaf1045bd6b1b2e *data/PM_COAD.rda
dfdea3b63099f0a58a0985bdddc2bccb *data/TCGA_COAD.rda
71c3e5784d2fa12696c5b6cc9241474b *inst/CITATION
9c8e65ac485cf12704147692e7fa9be6 *inst/doc/Rediscover.R
09d4d10399dad8e0c60a553667eb497f *inst/doc/Rediscover.Rmd
89cff81a6a9432d144b8a71a4401635a *inst/doc/Rediscover.html
974534b929f7bca2e390f78a6adb6109 *inst/unitTests/test_discoversomaticInteractions.R
2710d0904ac3705077f57ac9efdcc7b9 *inst/unitTests/test_getMutex.R
39a62d00177a46fcee25683fe4f1a431 *inst/unitTests/test_getMutexAB.R
9206d807512bea861cefcae08cb82e47 *inst/unitTests/test_getMutexGroup.R
4a2421f6b36719fb90ec5b8c3457709a *inst/unitTests/test_getPM.R
3541deba0a8c65ffe6a4c5d6adfdabfd *man/AMP_COAD.Rd
82189446e2195f5cae795c0d7144983f *man/A_Matrix.Rd
3f6596514587a4722dadac0b9f72eeb7 *man/A_example.Rd
4e8a0ecb568e7b5c608de13ddd288713 *man/B_Matrix.Rd
60e42374251654b8ef146765881798ff *man/B_example.Rd
79771356812414440c1e8b41fdbc58c3 *man/InternalFunctions.Rd
b61749731f75df3e8b8d5f86f3a37e43 *man/PM_AMP_COAD.Rd
7d774b37c30cbcea94c88407d291f8a0 *man/PM_COAD.Rd
06cf93e372ffe7befca541c0e85691c5 *man/PMatrix-class.Rd
a62d8fe72e28e6e6e0ee1f0e3f723948 *man/TCGA_COAD.Rd
a37b55543a7cd91c3f1d3df3fb451234 *man/discoversomaticInteractions.Rd
22d9d20c9a5f20916f200a50d9b3dec1 *man/getMutex.Rd
9ae9dab764225096cfe975936249b5d6 *man/getMutexAB.Rd
eabd96db94e5bedbe05efe19a1381a54 *man/getMutexGroup.Rd
6c059bb1ac3d37fac4a2dd06e47e1cc0 *man/getPM.Rd
7bb83f45fdcc62b5df8d6e372a906732 *tests/runTests.R
09d4d10399dad8e0c60a553667eb497f *vignettes/Rediscover.Rmd
8db0972cdb406680a6f36cc898df3b2e *vignettes/coad_discoversomaticInteractions.png
fcf82d451b02591ab09db86b52b14abf *vignettes/coad_oncoplot.png
e55463567c5836472536df59e7e4f3df *vignettes/coad_somaticInteractions.png
e1dff25fc6e0cb9d6ef619d810edb0b4 *vignettes/flowchart.png
