1929b8cad8093b7cdc82c990fa1f69b9 *DESCRIPTION
c4c131d02f28fccba179b61a718527c5 *LICENSE
6eaee8db67c6c6ba4c396afac0cf6b23 *NAMESPACE
481f72dc8239c62f0c8a4d4b14f9a941 *NEWS.md
407ce6ea347fb0df9e121c81b418de37 *R/RcppExports.R
3ddce02e78a4e04186a265b07c8e77f7 *R/data.R
0d63cdb5f742b6ff14b4497d0ecc92cd *R/dimension_reduction.R
e67077af03c270ca476f5af0e69f91d2 *R/footprinting.R
4532113ea1f4a69cbeabfee05b2bed1c *R/fragments.R
4c73d71c0bfa36c9d4f9da55aa07efa9 *R/generics.R
e597ef78a4dbb4729a227de9a61d8aa1 *R/genomeinfodb-methods.R
6e70fe636a4457e79472efa06f1386b8 *R/granges-methods.R
2800bf37da0c608142f3a2eb71d51048 *R/iranges-methods.R
60491f8a541a47bf3e2101e9484d2e7a *R/links.R
a55826b72949c604c3c699bd054dbbf3 *R/mito.R
b029e2a37f858c3a0b240c027b498389 *R/motifs.R
47ff54ac60da3468cfcc4621fc3fc352 *R/objects.R
5709ce4b5d491237a9272f18704f67ed *R/peaks.R
77abf482516d49aa58a35b4549f78582 *R/preprocessing.R
0de00d33f9c9670b3471eb5068777c68 *R/quantification.R
bcf3575493aa1816ff4b286a74a90160 *R/utilities.R
d4353a35f6c8f0b0351bcd1ab1a08756 *R/visualization.R
f60ac202abec8fd852e144f8041504c0 *README.md
adb25e518c621020305b10b3e942ab36 *build/partial.rdb
92d38b9c59b9de575d3da46a9f2947b0 *data/atac_small.rda
e44ce034696b2a7650c4c103e848a7cd *data/blacklist_ce10.rda
84116d6460f16fad743f6eccfc923c63 *data/blacklist_ce11.rda
9cedcbeaa9f92aafdc59986d77475023 *data/blacklist_dm3.rda
b5a7cd786ba389ab851502a6a74fafe3 *data/blacklist_dm6.rda
67d0ece372cec5b3bf8d0afec6f50ae1 *data/blacklist_hg19.rda
a8393a223bb605d71ceb835e11b15f7c *data/blacklist_hg38.rda
75017f216f1a3dcbc7b9ec037b923e7d *data/blacklist_hg38_unified.rda
7e432170b3d2fbc25d558ddf6d1ecf7e *data/blacklist_mm10.rda
5f751316987d0d6d754b7342bad0741e *inst/CITATION
26a0f5eb639885c6c1f1a9a4839041e5 *inst/extdata/fragments.tsv.gz
df1eeeaeb35987e59fafad9e2cd74ab1 *inst/extdata/fragments.tsv.gz.tbi
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6c1c29df4269a2e19b16aabf722a4329 *inst/extdata/test_mgatk/test.A.txt.gz
91882adb17e81e7f12ef0d97733ccc2b *inst/extdata/test_mgatk/test.C.txt.gz
1e276b4801920e7df8112de79cd444ba *inst/extdata/test_mgatk/test.G.txt.gz
2fa3bbc55c7ed62738e95da7b5d1e4a3 *inst/extdata/test_mgatk/test.T.txt.gz
208c6cb740ecec1cb5b80965a150597a *inst/extdata/test_mgatk/test.depthTable.txt
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80d24009674f0599f269fe4625bbdf74 *man/GenomeBinMatrix.Rd
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4aa1a4b97ce27e4e3394ff5040440103 *man/GetGRangesFromEnsDb.Rd
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6713e9885cef50df787c0fb3fd3c87c4 *man/GetTSSPositions.Rd
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1786da58285549a852ff0db50830dbda *man/InsertionBias.Rd
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4754f7a70701102baa9c68ec85f621d3 *man/blacklist_hg38_unified.Rd
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