d1729db200560c9426d803e8c7524640 *DESCRIPTION
3fa00250d852b6448149384b6289c8a8 *NAMESPACE
4382ab75f3e9f554430b38e7cd9efc98 *NEWS
4b6f373fcf200a98b8bc00353c9d767d *R/BF_Rao_Blackwell.R
404870f1f206e5ccacc99086148eb0f9 *R/BF_auxiliary.R
f8747c405b2e8c8acec04c9d84692a40 *R/BF_likelihoods.R
443247ce1e34466c22a75fe1bb110418 *R/BF_marginalMPT.R
6b0e0882a906819bc308b108e93002de *R/BFslope.R
ff4ee3fce7c5db5d35030f6a3de64ab8 *R/CollectionOfInputProcessingFunctions.R
1053f598a5575418ae0c40001e3514cf *R/PPP.R
b373dbe00b31c47ca8d715d93d887d29 *R/RcppExports.R
e4fdbad8101cbda0c537a707a92395ee *R/T1perGroup.R
580ced155df2d4e7219d1ce148135e4d *R/TreeBUGS-package.R
47f0528f3dbf9a8bdb32c1f601d4f8cc *R/WAIC.R
44f07f426fc983e287877c89b32f4452 *R/arnold2013.R
2028a52eb7d9fd03b978b88eaf785010 *R/betweenSubjects.R
d27528d2b2f39c704f7609b24f74569d *R/callingSampler.R
d0695b50429b04aff96363ee4111b9c7 *R/checkFunctions.R
a8af8a27083930b4bba6b15e08dd01e9 *R/corSamples.R
3a42c58db23f905d20077883ab7deb47 *R/correlationBayes.R
d11613a1ba9446c1152012b4dca81cbc *R/correlationBayesMCMC.R
e567b74107c362b0cd9c8043fb267335 *R/covCorrelationString.R
a11a01d284740310dbcb74774da70339 *R/covDataRead.R
13de4c675f54042227fde73113a12f95 *R/covFactor.R
11a571f682450af46ebc9f66e326238b *R/covPredictorHandling.R
86d9b6e01be3c26b06a04e9efeba3a36 *R/covariateHandling.R
4cc5dad77fce535de13bb44fb8ea424f *R/extendMPT.R
bf073213f3ac42c922e10dde103206bb *R/fitBetaMPT.R
51e1ef64c38f9ca0059aaf9a8c7ba6a6 *R/fitBetaMPTcpp.R
e2b3326abf5d9063b84b432e52e53cb2 *R/fitModel.R
22c28e1d9bf22757047f038a5865aab2 *R/fitModelCpp.R
a7c661d1a277787f103502fa88e4cbd2 *R/fitSimpleMPT.R
ed0174f025513031a68e453eed480ca4 *R/fitTraitMPT.R
0345bdc6de00995abac7472b63a825da *R/genDataBeta.R
81f70ae96e30c56ba0f86d9369aa4a9d *R/genDataCheck.R
9054a1fb579566a8b0a84a210d11d1ba *R/genDataMPT.R
b4b0e3ace83efb1d1e09f9b8fba91172 *R/genDataTrait.R
dc96fd5e035a8e38d3ae407c41419544 *R/getGroupMeans.R
ac81d8573a5e8a560b31451de832a7d3 *R/getParam.R
85e7d7f3d1f4001669ab921c65d84faa *R/getSamples.R
4256233500c4c6675d77bc81b33270c0 *R/makeModelDescription.R
3d3646fb068399795abd9370b47d9d02 *R/parseEQN.R
0104afc3766ed147f0cec0a0d7bbacd6 *R/parseRestrictions.R
9e92d5d1fda5e2313b59e56ad1fa0638 *R/plotConvergence.R
a2b8a95126dc3274865cf1c0ee6312a3 *R/plotDistribution.R
bb8ceb6edb08378f8ac6daac7f8ef904 *R/plotFit.R
db7f21408ca98a056f6d5d01799aaf8e *R/plotFrequencies.R
a5b61a0ed595190559f88fad5f149e27 *R/plotParameters.R
a6032ba29b1f07076da5827faa6aa9f7 *R/plotPrior.R
97e62704355d0f14c62849630398cc96 *R/plotPriorPost.R
22955493eeeb6c10f8cef3d67470df89 *R/posteriorPredictive.R
7ed9c00f7b9df98bc398a1b06ab44537 *R/printMPT.R
e09e0dfcbb4be1d5be3b1e07990eb654 *R/priorPredictive.R
36b3317dea71d73c2b4c8c72e2d0f47f *R/probitInverse.R
b340445468aefb57ff249ffd7a2a8641 *R/readEQN.R
2e02684f789171c8c08c10dd84ec6cb3 *R/renameBUGSoutput.R
65681d40393bdbeafad2c106cf5009cc *R/sampleHyperprior.R
2ce76d777a7d45e6fde727cf9c14b6ba *R/summarizeMCMC.R
881918ba2f46a876c5699184eaea6e38 *R/summarizeMPT.R
77299ddcf95e808b776d06a7c9d636d0 *R/testHetChi.R
7d63ec41880569821981902c238c4621 *R/testHetPerm.R
22913215fa3fd5cbe9b595d24e242946 *R/thetaHandling.R
86e1d195a0af631aa90693ffcadf64c7 *R/transformedParModelfile.R
accc4d6d9355ccb7e1b96b9dc76c9fbf *R/transformedParPosthoc.R
01a38fa193d24cd7da0dfcf6eb12c7b0 *R/within_subject_EQN.R
502d78165c5bd5eb54af1a5bfdaf7cc3 *R/writeSummaryToFile.R
f01682ffd9d5582c0d3b8a226f3c2b16 *build/partial.rdb
e892c8a012c29654be10c0448c7a188b *build/vignette.rds
71355a4f936ee6d3f69e673fa73d4237 *data/arnold2013.RData
961c2d42a3a9c99445f07efdf547ffb8 *inst/CITATION
05e74db71d7fafbaacb957b1daa34dba *inst/MPTmodels/2htm.eqn
d9a6bed11ce4e4545fd0001882d8b950 *inst/MPTmodels/2htsm.eqn
c68dc54b1cbda575c4d8288f1bcabca8 *inst/MPTmodels/winbugs_zero_trick.jags
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ac3fa030761c52a63ae1195498a032dd *inst/doc/Heck_2018_BRM.pdf.asis
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3079801a521d6c390174001a7f949a04 *inst/doc/TreeBUGS_1_intro.Rmd
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64193aadfd9f5fbfcecd54469b0e34c0 *inst/doc/TreeBUGS_2_extended.R
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fe4da836ca29e55ebd4eceb6ed9f3a3b *inst/doc/TreeBUGS_2_extended.html
329619edbd51577ee2f3cb451e57fe50 *man/BayesFactorMPT.Rd
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013fd15ab3a65a17de60f14ab2335d95 *man/PPP.Rd
1280e10dc1c85a926f444e7343be8d50 *man/TreeBUGS-package.Rd
ee2fa50f6e2bfe80f903e61f78c22fce *man/WAIC.Rd
a69a3d55886063a2a524df6056593125 *man/arnold2013.Rd
9bc097e939e66b382480f86fc3a409ac *man/betaMPT.Rd
adb0d3850aa879ef141a1bd84759bfc6 *man/betaMPTcpp.Rd
e1b7d5d5c842965ed9b88ed0dccfbe11 *man/betweenSubjectMPT.Rd
7863eaec22b098ab08a1db61618ce76f *man/correlationPosterior.Rd
207e6abe9e0cd0c8a70e3ee8c4b5f9fd *man/extendMPT.Rd
91709228a9d5cd404adcfb517147c703 *man/figures/TreeBUGS.png
3a46b26d1eab4ad7743e594d1a3261d5 *man/genBetaMPT.Rd
9989381c72f8aa09f833c07b56f1c565 *man/genMPT.Rd
925036af1b9b1f4099ad644bfc4be8bc *man/genTraitMPT.Rd
6753697d6aeb4475eb9a430ce8ade3fa *man/getGroupMeans.Rd
88b5fa7806b5507ac151bb788d801c6c *man/getParam.Rd
77aab0cc5ac4f84b99de180af95080b7 *man/getSamples.Rd
e2bda32b5c987d66cda48deedd29bb4b *man/marginalMPT.Rd
18c3143bb7ec60c2ab5b1561729212d0 *man/plot.Rd
39a05b8919ac80576b4ff6c52ecdba29 *man/plotDistribution.Rd
4b8890c00160170de035a51e7e521b02 *man/plotFit.Rd
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c439717787f1b850a285c2c75ca2fda5 *man/plotParam.Rd
6abd75928257df003022ad6c54da9d6f *man/plotPrior.Rd
4126f9530e190e176a0389c7edfe6579 *man/plotPriorPost.Rd
5d266d756176d3649abb966e9f1fc51f *man/posteriorPredictive.Rd
b10e049fd4e32240a864848b52e346ee *man/priorPredictive.Rd
38d621d76ed9db721533ec068fe93ed0 *man/probitInverse.Rd
88acfa63fc9f1e0f9c813d184315d83c *man/readEQN.Rd
3971f4e4c99c8429cc93c2bd919c6cf8 *man/simpleMPT.Rd
5ba24b361c9280ac2ae9115dc16edecb *man/summarizeMCMC.Rd
c5c6e2da7bb75cfb0f591ed6516f7723 *man/summarizeMPT.Rd
b4bac867e0de2218b621f4991520f52b *man/testHetChi.Rd
9bc166678e0179e0a04da3461b446ec8 *man/testHetPerm.Rd
04bceb8eaf0322412db3759aaa1e067e *man/traitMPT.Rd
a1c1e67569b8b1bb6568b6a6057032a2 *man/transformedParameters.Rd
522cdbe6e6f0b693499f4729428738c3 *man/withinSubjectEQN.Rd
2a6f9e9e044a78154d3cfda5936d6f48 *src/Makevars
3a214e4bac0fbfc890f786b98b7af501 *src/RcppExports.cpp
e8d98d0c4b46e78992bc11878ea28a68 *src/betaMPT.cpp
36fb7d6cbcb3b4a848fb1b0586803b07 *src/init.c
a34ce7c6b1a02949b611b62fceeca759 *src/loglikMPT.cpp
3cd4ae2b745a244c81a09946f6d340fe *tests/testthat.R
bdc50a24c61bd0743d8376ce630568ed *tests/testthat/test_fitModelCpp.R
03d4607c59a68726271ebfe1905b5dbb *tests/testthat/test_genMPT.R
e30f460b6ca9ba84b1e47013b34ca259 *tests/testthat/test_readEQN.R
ac3fa030761c52a63ae1195498a032dd *vignettes/Heck_2018_BRM.pdf.asis
3079801a521d6c390174001a7f949a04 *vignettes/TreeBUGS_1_intro.Rmd
d88d1957d42521bf627c83f484b1a450 *vignettes/TreeBUGS_2_extended.Rmd
