918186c72d443dc655aea1b25cb48dd5 *DESCRIPTION
798f21e230878794c405d80eb0db1399 *NAMESPACE
ac7766459521b6cad5ab9edf46d1bd37 *NEWS.md
006e630fd64eff1905c7790b9551c43a *R/AdditionTree.R
58039cf22d807a5848e332e32e1b8508 *R/Bootstrap.R
9e84641b085923127410b382c7a784e1 *R/ClusterStrings.R
e46d647184056782a64d82b6f5f11a4a *R/Concordance.R
1259352bf48f804733452e04536aebc4 *R/CustomSearch.R
3c1e5cf6d3646428977dc5cd40ef330f *R/IWScore.R
d41d8cd98f00b204e9800998ecf8427e *R/ImposeConstraint.R
ad61eb7dbffa94d6414ae16a5ff1f9ec *R/Jackknife.R
44e6279b2603c71692f4d39c4dc38bfe *R/MaximizeParsimony.R
7f7025e063f48859f4c1530e512b2cc4 *R/NNI.R
a080494120117c1f23f8776333a477a1 *R/PlotCharacter.R
2142238851a7c3a69c7d91cda3d38951 *R/RandomTreeScore.R
d5ec82ef09c31b019cb5bf6e54933444 *R/Ratchet.R
118649b2a398c5dc64d2e5cba1ca7c3c *R/RcppExports.R
6079f30e5b89758dde14dc46c4b8ede3 *R/ReleaseQuestions.R
ea8165fd9f3afcf1ef0983b23747a76f *R/SPR.R
43be2bbc2af02a0389337c74461dff69 *R/Sectorial.R
d345d8de3a8467d44fd285c71648e47d *R/SuccessiveApproximations.R
2677116d6b06da1fb7a51969316df555 *R/TBR.R
5a6866a65fc10cf50ab6b6576b436dd6 *R/TreeSearch_utilities.R
89c6c1f5da4b1f8f515c1b455d61697b *R/ci-ri.R
94b34928206f75e38aa7fa11dc077f34 *R/data.R
c7b735f2c5c813c3c26de88341e9bb88 *R/data_manipulation.R
0f7c9db53918d2e46b19bb3385333897 *R/length_range.R
26f7032c5bdd70ded7d85e28dde84ee0 *R/mpl_morphy_objects.R
0f8921b005fc17a3255b2e499dd622c1 *R/mpl_morphyex.R
7a1e2a7f7a727c17f4edacea306494f1 *R/mpl_visualise.R
42e4ff723c6776155cade2e7ff4710ca *R/pp_info_extra_step.r
c0db86df6e7ff082d566e0ae80587980 *R/tree_length.R
3fc439fb852e82a1c0ac1eba8722bcf3 *R/tree_rearrangement.R
a6eb59367ae07937ef8b9c602ab2395f *R/zzz.R
494426d84bf4498ad0950b356bbf6d1b *build/partial.rdb
1c42b08d2b943649d0098011a2905aca *build/vignette.rds
b03aa71a408c0036eb82f0bd9953b7fe *data/congreveLamsdellMatrices.RData
a13b62dc5c41d740b9dc7826d6e7a144 *data/inapplicable.citations.R
c930731d527c5c10c8ef8ad6f231e5cf *data/inapplicable.datasets.rda
03c7d93169712d4f2726b75795bafeac *data/inapplicable.phyData.rda
7ee80304a3c461a2683334e114f950aa *data/inapplicable.trees.rda
2fa0fa57499b0ef8ff1d61d389ad3031 *data/profiles.rda
17e82c121c556ecb46be829c0dd164b8 *data/referenceTree.RData
26bd20cb78dbf6ba9fbdc95d41818e9e *inst/CITATION
04e8c9c3764405e7b6aee193ac7aca58 *inst/Parsimony/app.R
3aa0243c51d96800c3fd4cdac163c78e *inst/Parsimony/www/app.css
a91afeaa78a52e908c49901160dcc9e2 *inst/REFERENCES.bib
eb6ca8f58ed5120d71832c7f1108112f *inst/WORDLIST
2a33c016808841801938c7c7b2dcb1cb *inst/apa-old-doi-prefix.csl
520d481d8b5b940239b34e245d1d2b4b *inst/datasets/Agnarsson2004.nex
6bc9590c48a62dedb72d4e212769a68e *inst/datasets/Aguado2009.nex
41e0d3c27ea69a47708f7aefe92c5c32 *inst/datasets/Aria2015.nex
57b3532e05abee817e6209a802306e5e *inst/datasets/Asher2005.nex
b9daae279250f9599f7b9850284d2707 *inst/datasets/Capa2011.nex
f7deaccebf00d039d10da81c89e401bc *inst/datasets/Conrad2008.nex
6896d6d410d89d196a9344731627fd26 *inst/datasets/DeAssis2011.nex
82a381cfae9422b4c9d624a466016ed1 *inst/datasets/Dikow2009.nex
b87fbf25d4e060fa78eb8cb72af927eb *inst/datasets/Eklund2004.nex
97a8aabb9695a75dcf2329dbf0b3fd92 *inst/datasets/Geisler2001.nex
933bc36032bdbad27d823ae48fe0e961 *inst/datasets/Giles2015.nex
ccc8e66dc82ea110738cb181c7a9d12a *inst/datasets/Griswold1999.nex
155e545377a08f35c22d2fc78a62e6ff *inst/datasets/Liljeblad2008.nex
f7374c614cb02f57f5d0516a64b48b24 *inst/datasets/Loconte1991.nex
9fe90589043208e189c43f4cdf457fd2 *inst/datasets/Longrich2010.nex
6ae3610d7dc46f8a6b911cf6e6c085df *inst/datasets/OLeary1999.nex
c2fef0b4824aec5664e58f0e7f312124 *inst/datasets/OMeara2014.nex
d51b152d9311b484146470dd1cf9c5bc *inst/datasets/Rougier2012.nex
8149374f9c3201135dc74989854624d4 *inst/datasets/Rousset2004.nex
429781c9f2a6998e77d0988ad448ec80 *inst/datasets/Sano2011.nex
b530f7ac57cad5b68f5dfd6eff912499 *inst/datasets/Sansom2010.nex
687aa7b588be2f02ffbcedd50f1027aa *inst/datasets/Schulze2007.nex
2180f1e19aa9ecddfac4820f9fee3cdf *inst/datasets/Shultz2007.nex
0d63da235f2459a55ca393b334db998c *inst/datasets/Sun2018.nex
ce17f7920a7fe590a1348f1ec42286e6 *inst/datasets/Vinther2008.nex
9b9cc293bbfb7d00a8e5cd162b6fe953 *inst/datasets/Wetterer2000.nex
bbcf43e2b0e6a1c4b41379eab07b36c2 *inst/datasets/Wills2012.nex
83fb41c490e4a2a895d5e958738a4ade *inst/datasets/Wilson2003.nex
c2f53c680c34053e755ee7a72a879366 *inst/datasets/Wortley2006.nex
aaaf7a3c1d4e035bf96d0ca43b04f9be *inst/datasets/Zanol2014.nex
e554e9f1e3d522378d5dc21a7cf5109c *inst/datasets/Zhu2013.nex
21001b6a501f37c8c09a9fb4e8043f52 *inst/doc/custom.R
8d769f0bfe3447ecc94be68fa7e803ef *inst/doc/custom.Rmd
033404dfa2f68d257621c7761f28979f *inst/doc/custom.html
2d29ee0fe8328ea44cbdbffc39548114 *inst/doc/getting-started.Rmd
c164a50b91a5f88e7bd194c94f6a7762 *inst/doc/getting-started.html
ff2bda48807d4f8238268ba9a919ea64 *inst/doc/profile-scores.R
e5ae59a93e386cd13be077dee8b8e5bd *inst/doc/profile-scores.Rmd
6fdc543ec802cb0c7cfe6766d17b8d53 *inst/doc/profile-scores.html
3c7bb6476cb080c6fb4035be61439793 *inst/doc/profile.R
0a0ad0498de05441428cfb83f9d5ba3f *inst/doc/profile.Rmd
30dcb0925bd469c2b9d6e6ea69d95021 *inst/doc/profile.html
0c75c95a6132b49a151250b904e1e638 *inst/doc/tree-search.R
1831f30da9b63914c545b256743bf0be *inst/doc/tree-search.Rmd
c0680f6a1cb6a71ddece6312ebf275eb *inst/doc/tree-search.html
145fa68e8da376b4a6fb6d129550965f *inst/preamble.tex
6f3939497d91942823b3443bb6f1283b *inst/tests/benchmark_timing.R
3d10d77a6723fa57e4b293878f5c080c *man/AdditionTree.Rd
ae4cdef777903c3a7382fb9d6ba29069 *man/AllSPR.Rd
9913664f32cdd531810490cf0e5caf11 *man/Carter1.Rd
5d542ae8c79287c57d5ebbe57b159409 *man/CharacterLength.Rd
cd4c0cb00c10c64494e9143e621744da *man/ClusterStrings.Rd
7e2fe4e931741bc0a5f19e1a92840df9 *man/ConcordantInformation.Rd
ee964836329bd27d8c16aa13d5c96195 *man/Consistency.Rd
22260b932b2217ac9b79ef05f09b64f4 *man/DoubleNNI.Rd
0d1668fd92f0dc7716e66078997b58a5 *man/GapHandler.Rd
779440ff856516141d0f7c1b410a5336 *man/JackLabels.Rd
b353d09665a23b87b8e3cbde63736b43 *man/Jackknife.Rd
104158de2126c513f03f42063b9c8a4c *man/MaximizeParsimony.Rd
208acb82cdd9c6e35c256e0189f2144d *man/MinimumLength.Rd
9f5583fad8c65e7730cd51b02fa04870 *man/MorphyErrorCheck.Rd
a8ebdeeeb174086717a0b16026509f38 *man/MorphyTreeLength.Rd
61663ffafdfe2109953917150d410c52 *man/MorphyWeights.Rd
f490baf3f5c3e5d11c1ec917d81981aa *man/NNI.Rd
ccc5525a091e2d86863a1042481733aa *man/PhyDat2Morphy.Rd
d75cf34ed77e97eeea34598cfaf16e6e *man/PlotCharacter.Rd
dee5eb6b9abf5e96c5040e6b684cc16b *man/PrepareDataProfile.Rd
fa407cfced25f272f2b1048682b81327 *man/RandomMorphyTree.Rd
cb77d519cdd8a6c70f9ff68cd1b9045e *man/RandomTreeScore.Rd
c08aa1c557b7d6fe35ee2296189d3ce6 *man/Ratchet.Rd
a0d93153c672d7f90bbce06664d1bef5 *man/RearrangeEdges.Rd
dc6eea9c57ef8ded00393be21ec75e35 *man/SPR.Rd
c0401dca30c88b721140f921aee39e34 *man/SingleCharMorphy.Rd
ca10e7c8d183eca2c38514deaf13decc *man/SiteConcordance.Rd
9a3a978323045202621682a88b26b739 *man/StepInformation.Rd
3e91b6f920ac81cbda86ace53977559e *man/StopUnlessBifurcating.Rd
9bbe0d3372e10dc6870df0185ecf765e *man/Suboptimality.Rd
97c07c19cfd848218f426d2070a4d489 *man/SuccessiveApproximations.Rd
20564030623a8ee462c759e2f7b8cd68 *man/TBR.Rd
34c03f457664aaa294b4e4fef37c894e *man/TBRWarning.Rd
e433b6af21abf2d45756e8a0b387ad6f *man/TreeLength.Rd
6131af3b8da0306a9b34b424ce58c212 *man/TreeSearch.Rd
a76434e9f00fc2247689211f9a287cbd *man/UnloadMorphy.Rd
d2cdbaad82693fe1f7e068db401045e1 *man/WithOneExtraStep.Rd
3f78bb923a98f88230b9a72641216401 *man/cSPR.Rd
2267f03eeefb23af410af0ba18c98058 *man/congreveLamsdellMatrices.Rd
c034451ddd47e18dd8f0b1d1e1372f9b *man/dot-CombineResults.Rd
2eedc7307c4bd056670b46362a577f7d *man/dot-GapHandler.Rd
b7aa6556f51e76a8990c27845f632154 *man/dot-NonDuplicateRoot.Rd
e5358f2b4ae7f7141e7b92cd7d7893d2 *man/dot-UniqueExceptHits.Rd
a7a40e13547e5fc1c1ee1dfc97b34e4b *man/figures/Easy_tree.png
9f5d2b379e8bc88b2c39b5c98e68d5df *man/inapplicable.datasets.Rd
44db4d3a6c94eb61d5b2cc6d6818c207 *man/is.morphyPtr.Rd
2a3fdf8703508eb05eca8e62b7948241 *man/mpl_apply_tipdata.Rd
1c87d346288cb26af4bbe46405ee41c2 *man/mpl_attach_rawdata.Rd
aff7d7867ff44d0a771f46b01e5b817d *man/mpl_attach_symbols.Rd
d9d98b31b4a09d02cdf3b629c1538b58 *man/mpl_delete_Morphy.Rd
7871af790fbb7719a0e6f04d33c60173 *man/mpl_delete_rawdata.Rd
c47397f4406fc3d22702bdc7c7716c5a *man/mpl_first_down_recon.Rd
f3a1bade8cb912e5edc2aa01878a755e *man/mpl_first_up_recon.Rd
9b92eb9465a584c1103b0b8ac2a910d2 *man/mpl_get_charac_weight.Rd
610e29f4a4b9be12da211a52ff594ce4 *man/mpl_get_gaphandl.Rd
660af01181a15026a6f1689a82177e26 *man/mpl_get_num_charac.Rd
0983f3db86c25dda346cd248f3cf232d *man/mpl_get_num_internal_nodes.Rd
1dd5c689045ce527af7a1edcb2e835d3 *man/mpl_get_numtaxa.Rd
71357ec36972272c96b9f0d26425d492 *man/mpl_get_symbols.Rd
f49a5a0359ac1a2b1c2e7bfa5b5caf1c *man/mpl_init_Morphy.Rd
350cc391a9a685f6f13e6bafdb5a3a04 *man/mpl_new_Morphy.Rd
b1a4f6c67fa67e7e8f671606efdd64c3 *man/mpl_second_down_recon.Rd
a1365ad25ef36edf44394e99fbb3f04f *man/mpl_second_up_recon.Rd
f3219e22112861c631b00607700575c8 *man/mpl_set_charac_weight.Rd
459c26f6367dda7b8b9c7a4ef0c740b1 *man/mpl_set_num_internal_nodes.Rd
bbf00ce1d4a1159df0598319115e4e94 *man/mpl_set_parsim_t.Rd
466bfc3410c6fc56fa9ef4ff26f9a18b *man/mpl_translate_error.Rd
6ef5cd0bbdce07b461ef9089252b984c *man/mpl_update_lower_root.Rd
df878c99726c59905aaf88e21f34ec6c *man/mpl_update_tip.Rd
bd42704809b3d1c6a93afa747ca903d9 *man/profiles.Rd
464fe8ee93eeb0d933bff26b60003bd3 *man/referenceTree.Rd
d29f347162a56a0aece5334d0751cdc0 *man/summary.morphyPtr.Rd
86b52291edaeaa65651b3fc826a1fbc7 *src/RMorphy.c
7c07cbb7a2230e46413b1f50fa7439e7 *src/RMorphy.h
b911120af4907c0186d4b8e20d3a05d6 *src/RMorphyUtils.c
ae77b11ab3b639b5abf4d24af17c914f *src/RMorphyUtils.h
6def81f9785b18664a4f468a3b08d800 *src/RcppExports.cpp
f689a5b4e1e6447a14c5e137eadc38a1 *src/TreeSearch-init.c
1dcb9c38632af9b3e2baf1a7d8744389 *src/build_postorder.h
6c77b48c63f2b709c078385c9227c718 *src/fitch.c
a44a841dee000b4e8d9d99fe8a97119a *src/fitch.h
3a83c3c95a3a4e5677439f29f6d2cd15 *src/morphy.c
e9d451b45f55d8dc3b0e36fcba1b310b *src/morphy.h
50d0aa1460948a7f6988ddc20fca9fac *src/morphy_score.cpp
d652d012a75476d30d0d61ef4bd3ff7f *src/morphydefs.h
81295a455939741d10b93eb4ad260861 *src/mpl.c
04a68d6347e8c4e87c4bce1950b5cd28 *src/mpl.h
e4dfbb86174789a14d455158966dc9bb *src/mplerror.h
928234b9fc99982da86c2ecd974b867f *src/rearrange.cpp
e949578d4eb1c7c03b51d3b33b152f06 *src/statedata.c
008f1791e2af1564438d6bb29dc82b42 *src/statedata.h
1f7c1184c8e3348f25b1331f6f81ae6e *src/wagner.c
4fe2d0224cc12d1fdd73112d4737cbfb *src/wagner.h
473e3d09cce37f127cb654c38271f387 *tests/spelling.R
3700c7666fa24eba68595b7191205cc1 *tests/testthat.R
9f5c3d383d263ab2245a8ab43eea8f31 *tests/testthat/_snaps/Jackknife/plot-jackknife.svg
76d03396cfd75fe70721d69ade0be137 *tests/testthat/_snaps/PlotCharacter/plotchar-000011110000.svg
7de3bd45a5a08ae6414b1f3af10c6f4a *tests/testthat/_snaps/PlotCharacter/plotchar-000011qqqq00.svg
49b3e545ebdd588900154a04ab7e4b07 *tests/testthat/_snaps/PlotCharacter/plotchar-011iiqii0011.svg
146039526926ff683752fa43bbfa81f7 *tests/testthat/_snaps/PlotCharacter/plotchar-01iii1010101.svg
787b37567c77bb181fa754fa86a1833e *tests/testthat/_snaps/PlotCharacter/plotchar-01iiii010101.svg
eb5856da2c494af5c4df7a1c37b42382 *tests/testthat/_snaps/PlotCharacter/plotchar-01iiiiii0101.svg
797c69bde17d2ff3ce844eaf50af65df *tests/testthat/_snaps/PlotCharacter/plotchar-023iiqq1ii32.svg
f71c6354cf201793e751a68197de9dfe *tests/testthat/_snaps/PlotCharacter/plotchar-023iqqq1ii32.svg
e1a2a516e0d733ad45bc46f482c0e9dc *tests/testthat/_snaps/PlotCharacter/plotchar-10101iiiii01.svg
e4104208bbde6f3c60a94cd0d31e99ca *tests/testthat/_snaps/PlotCharacter/plotchar-10iiii11iii1.svg
26341d72e631c2af0e8840650f46c2db *tests/testthat/_snaps/PlotCharacter/plotchar-1100iiii1100.svg
d227818155dc046873bd63203864395e *tests/testthat/_snaps/PlotCharacter/plotchar-110iiqiii100.svg
e5815b7ca1f9ccfcbc8aae05c9d1511d *tests/testthat/_snaps/PlotCharacter/plotchar-110iiqqii100.svg
0e60fe656ec79fd253f9fd23d1f49214 *tests/testthat/_snaps/PlotCharacter/plotchar-11ii1000001i.svg
edcda9182ef9a71941240187f39fceff *tests/testthat/_snaps/PlotCharacter/plotchar-11ii1qqii111.svg
1148ba7560b7bdab04851254b082a1e0 *tests/testthat/_snaps/PlotCharacter/plotchar-11iiii111111.svg
84fcd749e13fa38550af0d0e0f9da97e *tests/testthat/_snaps/PlotCharacter/plotchar-11iiiiiii100.svg
c23909e0e6b9659583935b36f94af674 *tests/testthat/_snaps/PlotCharacter/plotchar-11iiqqqqii11.svg
30de8b3b0a31aff69238d4b1a4045cd2 *tests/testthat/_snaps/PlotCharacter/plotchar-1234d45baacgttt.svg
db09085ae28fd47feb7e9d934dfed3f2 *tests/testthat/_snaps/PlotCharacter/plotchar-1iii1111iii1.svg
5d8e140bb962ff751eb3eebe807e989e *tests/testthat/_snaps/PlotCharacter/plotchar-1iiii1iiii1i.svg
cc0f789a03f9886af7281feae8f6b895 *tests/testthat/_snaps/PlotCharacter/plotchar-1qqiiqqii100.svg
3b9c517db07f76f70a2f36d95a109eb0 *tests/testthat/_snaps/PlotCharacter/plotchar-210210iiiiii.svg
0bd6d2c55d8c53b2a27e8ba2acc91ea8 *tests/testthat/_snaps/PlotCharacter/plotchar-210ii100ii21.svg
93505c4d70112b58f6c851dd77ab38f0 *tests/testthat/_snaps/PlotCharacter/plotchar-21ii1iiii012.svg
5f4bf4c0e81d4a7676936e616fb88022 *tests/testthat/_snaps/PlotCharacter/plotchar-21ii3qqii032.svg
626dccdbbfbd814bd2151e93a22a9f79 *tests/testthat/_snaps/PlotCharacter/plotchar-230iiqq1ii32.svg
cd4ba76c10d3fc7ff752b4205dd96165 *tests/testthat/_snaps/PlotCharacter/plotchar-23ii1iiii032.svg
da77a42a230395adc62f3c013be00f71 *tests/testthat/_snaps/PlotCharacter/plotchar-23ii1q1ii023.svg
5287d2f8c4d67757b4d223d8634c5a81 *tests/testthat/_snaps/PlotCharacter/plotchar-23ii1qqdi0bid01b32.svg
e34e0ed894e254727fc7b972e717728e *tests/testthat/_snaps/PlotCharacter/plotchar-23ii1qqii032.svg
0e2442d8d5fa364aebc95e50a2ceeaf0 *tests/testthat/_snaps/PlotCharacter/plotchar-23qq1qqqq032.svg
826f6915716f9312e15abed5b92cea79 *tests/testthat/_snaps/PlotCharacter/plotchar-320iiqq3ii21.svg
e5688aae4894a15a6cd09d3127ab8cf4 *tests/testthat/_snaps/PlotCharacter/plotchar-i1i1i1ii1i1i.svg
9e0506e27ff7c7a58229bf9a26256f86 *tests/testthat/_snaps/PlotCharacter/plotchar-iiii1010iiii.svg
8e5121fd54e59a40c2c47c717339109c *tests/testthat/_snaps/PlotCharacter/plotchar-iiii1111iii1.svg
dea550b275b03bc499ab203a97a370bc *tests/testthat/_snaps/PlotCharacter/plotchar-iiii1111iiii.svg
60ddf73b02471d32f58eb7f72043a75b *tests/testthat/_snaps/PlotCharacter/plotchar-iiiiii11iii1.svg
148e038c86a5c6f388cccf13aa7c5877 *tests/testthat/_snaps/PlotCharacter/plotchar-iiiiiiii0101.svg
aadc8b70c4b010f165e8e5c8ab920301 *tests/testthat/_snaps/PlotCharacter/plotchar-iiiiiiiiiiii.svg
aadc8b70c4b010f165e8e5c8ab920301 *tests/testthat/_snaps/PlotCharacter/plotchar-iiiiiiiqqqqq.svg
713b026be547b8877dd17d4ad5f35062 *tests/testthat/_snaps/PlotCharacter/plotchar-out-of-sequence.svg
88c1591893e5c3eef87136873994a116 *tests/testthat/_snaps/PlotCharacter/plotchar-qqqqiiii1qqq.svg
fb411f8b79fc7a3019d0e9eb4894e402 *tests/testthat/_snaps/PlotCharacter/plotchar-qqqqqqqqqqqq.svg
9ac8ece0a23e3d5de1303fe910c5ff93 *tests/testthat/test-AdditionTree.R
01eb977e0ee20ca2ace5eced46166dd3 *tests/testthat/test-ClusterStrings.R
6d18bb0cf0c03147d14b4bed32b0ebfa *tests/testthat/test-Concordance.R
12cf0989761192319b43c097be7b2c5e *tests/testthat/test-CustomSearch.R
7ca17885f8a2503c4bcd936ee4fcaf9e *tests/testthat/test-Jackknife.R
1fdb73ea968182165a9870edb6de4a0b *tests/testthat/test-MaximizeParsimony.R
c6e467c22102cbc12307d2d100e01ada *tests/testthat/test-NNI.R
59228569014936c49a2f75d0942ea4c3 *tests/testthat/test-PlotCharacter.R
9a555608586f32eabd2fded98e428a35 *tests/testthat/test-RMorphy.R
4a011d540d9a23d4de4c7fc48c3f1992 *tests/testthat/test-RandomTreeScore.R
5be1db93ac45b69f1e0aac76d9809112 *tests/testthat/test-TreeSearch_utilities.R
ca997d749f5c0aeae5be021c69720da1 *tests/testthat/test-data_manipulation.R
2472fbd5c6cea64238904d0d9128d6d0 *tests/testthat/test-iw-scoring.R
95b14edb58d2757c9fc165affb383d5d *tests/testthat/test-length_range.R
51834fbca16e0408cf3d0bfd4f181e3b *tests/testthat/test-mpl_morphy_objects.R
6e746ddeeb1572cb7f4fc1bdf2321296 *tests/testthat/test-pp-fitch.R
a6c45902273b05a98c66afbdb2311aed *tests/testthat/test-pp-info_extra_step.R
27df227990c8920ecf665d562a589295 *tests/testthat/test-pp-random-tree.R
2e996de480da889a1b291be67d433c9a *tests/testthat/test-rearrange.cpp.R
bd49bfdbfaa0492e2470cf922c728eb7 *tests/testthat/test-tree_length.R
400fd3c98122d30fa3271451a12c4f63 *tests/testthat/test-zzz-tree-rearrange.R
8d769f0bfe3447ecc94be68fa7e803ef *vignettes/custom.Rmd
2d29ee0fe8328ea44cbdbffc39548114 *vignettes/getting-started.Rmd
547f4286b36d5b571d016fcd13f19ed4 *vignettes/gui_char.png
454466c01c29e3703050448ad6c8cd58 *vignettes/gui_rogue.png
e00d0545d48e4cc578c080b31001f522 *vignettes/gui_space.png
c20715cb0f10d10a86cbfd6d2a148dd6 *vignettes/gui_start.png
e5ae59a93e386cd13be077dee8b8e5bd *vignettes/profile-scores.Rmd
0a0ad0498de05441428cfb83f9d5ba3f *vignettes/profile.Rmd
1831f30da9b63914c545b256743bf0be *vignettes/tree-search.Rmd
