f3a72ad757d40bf4abd5657cda18cf62 *ChangeLog
92b6d4bf175675802c7573ac2666024f *DESCRIPTION
5f89f2254f0487f8fd236c24e67823fc *NAMESPACE
c508b811d1a84b4fb8fa2df58f2fe391 *R/RcppExports.R
e6535eb8a42c5dedf75fc9a85a5e0986 *R/abn-infotheo.R
84dfc53fa255814af8a60b48c2ce7101 *R/abn-internal.R
643bca8c13234b4b3f0c6fbc888b6eee *R/abn-methods.R
2a9e526408812d3f5c7eb9b6a7f9b5cb *R/abn-toolbox.R
3d0e58be6f1e27fe67a88517740b9bfe *R/build_score_cache.R
87adee7733554ef9a15b9a36e99f4183 *R/build_score_cache_bayes.R
a196ebc61f5b9797e5c5e1b9ae3080ac *R/build_score_cache_mle.R
45fd6ff9cf08cd2fe45be66cd82dbc0d *R/calc_node_inla_glm.R
2b993148f4043ffc9336b7bac21bf470 *R/calc_node_inla_glmm.R
4f0ffbfd35e4facdaa67c1f5db9616e3 *R/fitabn.R
df2fd72f60addcda409a5d3df5b1383b *R/fitabn_bayes.R
fb60274e45c9ea2302dd9f545bd7913c *R/fitabn_mle.R
b9e63bdd19cc3b5028aba76a5ad063ed *R/getmarginals.R
7ee44d9095f48c21ca30e44e71142b19 *R/link-strength.R
20062170af15e071fd71b85ee4cf3a0e *R/markov-blanket.R
0215dfc057114f2edb1ffaffcb98bd3a *R/mostprobable.R
0110933575172c76a98d32bc855acba8 *R/plot-abn.R
7b43e706bb55a5318fd3cd7d479103af *R/search_heuristic.R
c5a63d9be06d3c9dd9cc420d50ffaaec *R/search_hillclimber.R
5bce032c6f31a62975355a44de32482c *R/simulate-abn.R
0fff72b8cd7d22c0f40cab22e4f3c917 *R/tographviz.R
d84ee0b5f34b41545561b6abc3fcd85c *R/validation.R
6593b469833004678df1655038f6c889 *build/vignette.rds
94823f536be537a42bc2aacc7908e558 *cleanup
0235013c3c40626b1f7213855acb043d *configure
3bec8e05c1ef435a4e975396ed7c6618 *configure.ac
f498242ff4a74badd6737a403ccfb288 *data/FCV.RData
7da82ced816b8ea67eb5ab0485aacf60 *data/adg.RData
82a22fbc5407a5eccdb51eeb23b664b8 *data/ex0data.RData
cba07dc0b08845394270733b2d7c667b *data/ex1data.RData
8d27b83b419616d9c93130bbbaecb4fe *data/ex2data.RData
802f070cab8dc5df42d2f7eda5f5c5e6 *data/ex3data.RData
e0210425216170773902bda40b3331f4 *data/ex4data.RData
1ff2be161ba2566e8bb3139b4d9531c7 *data/ex5data.RData
624b7897490d6bc062632ce23ebc6652 *data/ex6data.RData
166b261826eb76072e84995d8b05d8e8 *data/ex7data.RData
ad7cc249cc3b4bc990671b8f037e1f57 *data/pigs.vienna.RData
256a987f46ef4559ee4e35ca9377ea30 *data/var33.RData
055db9813391dea63de47b2365eb071d *inst/CITATION
e38fdd887d54cbe99ef5b613dff90d03 *inst/bootstrapping_example/bootstrapping.R
a3ab0e8daccd8c480e4fc7bd793877b9 *inst/bootstrapping_example/bootstrapping.bash
01b6cf87e28c79ffeec9122be04c87ea *inst/bootstrapping_example/pigs_model.bug
fa8c44e1a46659dd842fdb016d27a5d2 *inst/bootstrapping_example/pigs_post_params.Rds
11f9fd57103c0b54265ef589fcc25d8a *inst/code_vignette/code_vignette.R
8228bf8ae0fcc770147f1d2a5c6572a3 *inst/code_vignette/data/dataOK.RDS
595e9d8afb3e301c71258228de230df1 *inst/code_vignette/input/model8vPois.bug
b27be3123c34b7ca1d2971f1a19c9f14 *inst/doc/abn_v2.2.pdf
18baad20385eb6b4501ed865c3028e78 *inst/doc/abn_v2.2.pdf.asis
15a80dc3c2707e0b538df36797fb096d *inst/old_vignette/abn.bib
7fedd18d4995ef38c1bbc1570bc5cb6b *inst/old_vignette/abn_v2.2.1.Rnw
f375526b20e1b1c0d1e6e57ea3f9e1b9 *inst/old_vignette/abn_v2.2.1.pdf
8d8c3b38738d83a01586f21db16a35a4 *inst/old_vignette/figures/Bootstrapping.png
540b610a1ecc3c31cf91bd9c9daa8747 *inst/old_vignette/figures/ComparisonOfNetworkScore.pdf
3c7c89e5a700f7341b836086f7e6cebc *inst/old_vignette/figures/DAG_cycle.pdf
a0275e92692042a3a3c7dc2e2e227665 *inst/old_vignette/figures/PigsArea.png
d92ce4b0e2efa3e2d82e2a7f277b8a9c *inst/old_vignette/figures/Summary.png
eb27b9008e47b2dbfde6cfa20f296938 *inst/old_vignette/figures/dagcon.pdf
e00af17e695a21b679439c87499fe615 *inst/old_vignette/figures/mydag.pdf
962e20e460e9e63f3aed32ef8812707f *inst/old_vignette/figures/mydag_all.pdf
5a75c927097afd12fdff01e11381e812 *inst/old_vignette/figures/mydagcts.pdf
ef1701d87dc5102c5075d82914455107 *inst/old_vignette/figures/plbinaryNode.png
43ed69fc44caa66a1118bd020126bb51 *inst/old_vignette/figures/postbootpigs.pdf
a96afc01dd929486d279d5d8bb7a6cf1 *man/FCV-dataset.Rd
fc450e8d19e83eceb6e43a77a2519225 *man/abn-defunct.Rd
f9a795445cccbcbd756d40103432e1cf *man/abn-deprecated.Rd
e82a6f214100be414f1b9885dc5484bb *man/abn-internal.Rd
b85897de155f8369bc2cbb2c33f28841 *man/abn-package.Rd
394f3958628972363ddf6835e504f95b *man/adg-dataset.Rd
e0f93004b454ff1e0dee3c519e2601b4 *man/build_score_cache.Rd
9b9af9ec9dd909fc3ea686d1ebaef328 *man/compareDag.Rd
4f2582dd578640b72030668d5a8b09f8 *man/createDag.Rd
4debb0aa355f76b0846335cd0e2a4623 *man/dag_ex0.Rd
7cac4e4380f2e0c85e88cf355fd683a3 *man/dag_ex1.Rd
650f98d888d375c90cfafe48cf0b9f3d *man/dag_ex2.Rd
50d2741e5ee393e3c28be8db31735b5b *man/dag_ex3.Rd
c07f79e9d30bc1118268eabd37e3b1db *man/dag_ex4.Rd
e8be00d4d847ace9f2b4f02120a9d03b *man/dag_ex5.Rd
9f88e0dcd4df58e41200000b46b166f7 *man/dag_ex6.Rd
27b896515678daa798c1406ddf549d94 *man/dag_ex7.Rd
f6858946aa0ff39c04c61943058194a8 *man/discretization.Rd
d3e7a59881e3a18e6a50639f745656e0 *man/entropyData.Rd
f43bc4f9c249741fe446ea312d0e9d59 *man/essentialGraph.Rd
8945c98ff1c7a47a3cbde3bfc305651b *man/expit.Rd
259acac8afe564a7ff7a769c64192d02 *man/fitabn.Rd
0a45280b6291d758e2d59ac32dc6e082 *man/infoDag.Rd
685967850105a572bd880c6e256fad63 *man/link_strength.Rd
8d7c3cc53b4395a15d28fcdb9b2d110b *man/mb.Rd
53d4ed89922d172508881265bf116df4 *man/miData.Rd
bbc871e946711d7a02a96017b7c5f30c *man/mostprobable.Rd
3d5d9b857ecab021c6aad07170bb5876 *man/or.Rd
130840409d15166db70bf06af7a47b19 *man/pigs.vienna.Rd
5ac971c1163a52b4cce874dbd55f7fb2 *man/plot-abn.Rd
15c15c1e578707e2f271325ac636bb3b *man/scoreContribution.Rd
f5c674bab97166ed1479dee4412ecd3f *man/search_heuristic.Rd
e50397c577865581cbdac71c3e4ac4ef *man/search_hillclimber.Rd
387cba019479c251c7acf6d41fae2956 *man/simulate-abn.Rd
d7c8e51f52956d60875a0fd58b834edd *man/simulate-dag.Rd
27391ca22ab2821b14e74dbc01e9599e *man/tographviz.Rd
9ce2fa2e4efd561673349f8ac43cb372 *man/var33.Rd
96b3de3864450e45ef62a245b0ef93ff *src/Makevars.in
8bfbf7a9b23a9469fb89f604d3069e90 *src/Makevars.win
13c377c48c449c7ecbf76f96ac1a6512 *src/RcppExports.cpp
64a743c4fb75bc3eec6a56bd2667fa8f *src/abn_toolbox.cpp
907ec1308e73c839ffff879da1673d8a *src/buildcachematrix.c
03fa8f4ee9431f283a1cd72d7ad456a4 *src/buildcachematrix.h
e317e5180a8a8505dea8229cbf76cbc9 *src/cycles.c
8bb3dfa59b9fb22f7641c62f0bd72778 *src/cycles.h
1fbeec9b3bb2a3eac9507b4eb7bbdb2a *src/fit_single_node.c
5e8cf0a91a7f10ae7d9bcfb225eae255 *src/fit_single_node.h
ad04efd60b8569b302fd1ca7d3b8e228 *src/fitabn_marginals.c
553194d842455483c712a66190ec9db0 *src/fitabn_marginals.h
91ad7d3b3c79c9c365b775701455577e *src/irls_binomial.cpp
bb1f3cab894da76aad301b2b40e27b5a *src/irls_binomial_br.cpp
e8bb3947b3a6b1080a66ee6c960ea29a *src/irls_binomial_fast.cpp
c3203b98ccb25e625ba46a41f2d46e5f *src/irls_binomial_fast_br.cpp
fcd524095a6285d45f247b52492afec8 *src/irls_gaussian.cpp
e944ba0b7bb6f2f72cb81d82d302760d *src/irls_gaussian_fast.cpp
d41d8cd98f00b204e9800998ecf8427e *src/irls_multinomial.cpp
c163f2a745d5b58d2fda6f42d8256b38 *src/irls_poisson.cpp
1dcb55ce9e649a2d195fbb77c3c735b3 *src/irls_poisson_fast.cpp
1522c9181ed3483e1c38768d4162025a *src/mi.cpp
bcc01ae8c17227fe3b97f082d8b9d994 *src/mobius.c
8cf1430fd00296d57e99f7b9af10bec6 *src/mobius.h
8dd39901fcdf5eb91472de4ea47fe99c *src/mostprobable.c
507e9fbacb69917c36a3ea09ce8d4487 *src/node_binomial.c
559d7928588ae919a760cac60151e2a3 *src/node_binomial.h
06b11cbe366ffea136701fc15d9886a8 *src/node_binomial_marginals_rv.c
e09122254492261c95d329aeb8182f09 *src/node_binomial_marginals_rv.h
7d78c22c74f9f0607d338c3e5b67281d *src/node_binomial_rv.c
b7fbc51e70421eeaf61852890645974a *src/node_binomial_rv.h
a57158dbcdf177c80fd13d75a6d887d2 *src/node_binomial_rv_inner.c
1f9d458814dd8f9235ef14b5cb5aa8c1 *src/node_binomial_rv_inner.h
0fef50fae68b37ced0092234746fd375 *src/node_gaussian.c
25b7ba7eeaa8a357d00307c58c8ceaaf *src/node_gaussian.h
218f90edb0459c1fccca1dd84f6588ff *src/node_gaussian_marginals_rv.c
fc58e50ae9435cf39de356c0ffc7e3e1 *src/node_gaussian_marginals_rv.h
02e3ecff8248b1a19939c453316e12d2 *src/node_gaussian_rv.c
ebb1473c9fd353b12e74e66797b8d245 *src/node_gaussian_rv.h
cc6b1ec5d8f513d25c02c109e234572e *src/node_gaussian_rv_inner.c
b3d35639fdd1a6d2023ef3bddd633f53 *src/node_gaussian_rv_inner.h
c4141863ef03e329b33b672c36424246 *src/node_poisson.c
8b5ac651d553cdaa1b6a3d93b1663100 *src/node_poisson.h
af05d7df36cdb33e69398b45eb353cf7 *src/node_poisson_marginals_rv.c
4f820ea5fb977aa6cb2891f66d19920f *src/node_poisson_marginals_rv.h
a34ce96672a85031e5fae437b43e01c6 *src/node_poisson_rv.c
9ae3a54a9eca95f54ae470ce7c18dada *src/node_poisson_rv.h
52f41b7e67f7cd21711acf6462528fc9 *src/node_poisson_rv_inner.c
07c858e77ebdeb98e51b0559a476d18d *src/node_poisson_rv_inner.h
0f7adec71dc415dc0325e86d9656344c *src/rank.cpp
2206f0c39b2184080337ec38090e6ce9 *src/searchhill.c
32ccb83723a7a70a9e5e8ed261efc4b6 *src/searchhill.h
f3a78447e2b41334bad0c3ec61ff9b33 *src/structs.h
016626f29b2f2ed3fdc7137fe65fcc89 *src/utility.c
55115b631bd67070f8e4f0cc765d01f1 *src/utility.h
d9255e48f69c66d5519b30298fa40aa0 *tests/Examples/abn-Ex.Rout.save
4048b4822ec3392e9acf457b5f47a7a1 *tests/testthat.R
4083aa6563b000baa86331589eef78ae *tests/testthat.Rout.save
7cde62124c577908d68609e9667fe7e5 *tests/testthat/Rplots.pdf
0093a6d6850afd809780d57c64a51823 *tests/testthat/test-backward-compatibility.R
3e43e41e6af383481817a075510abc8c *tests/testthat/test-historical.R
777fae66409cbe62b20db44313e3afc2 *tests/testthat/test-package.R
960302f20fccf7cd3cb3475b802f815b *tests/testthat/test-plotAbn.R
1850eb454a55e8682a02fd5cd9662265 *tests/testthat/test-validate.R
020c08f2bbecf5867806bbb66f7d9a2f *tests/testthat/testdata/buildscorecache_ex1.Rdata
fbacfb6c4f374153922b9638a8fd27f0 *tests/testthat/testdata/buildscorecache_ex1_.Rdata
2980ac038ce41407030f522db8e162fa *tests/testthat/testdata/fitabn_ex0.Rdata
08d5114650f313765454e3ff56e09223 *tests/testthat/testdata/fitabn_ex0_.Rdata
306c5d69b02991562594e50ac59bf351 *tests/testthat/testdata/mycache.Rdata
18baad20385eb6b4501ed865c3028e78 *vignettes/abn_v2.2.pdf.asis
