d760c331908eb8fd78af4df6ce324cde *DESCRIPTION
72a88a1812204657700d57f8260851ba *NAMESPACE
4a12111a9644d89a2fd8aabb1465513c *R/ALINE.segments.R
9fd6b22ebc8014eaa96487bbdd034985 *R/ES.update.R
5be6d446c4fb038487dccc2dc89b0064 *R/aligned_string.R
4771be286b757fc444865cd9628b6ae7 *R/aline.R
829445a01deb681e576065ef3ad4cd9d *R/crossover.R
fa16e7d96063053b26a1108716e5c116 *R/decode.ALINE.R
52d26a9d53a65e10cb2b33b7566a64c4 *R/encode.ALINE.R
33ab7aa4885d6badb693dc0aff0cab16 *R/features.plot.R
27b649cbb7d226e0a798ce3b90111b8b *R/fitness_count.R
22d292e9123ab92f991ad388f5af24ad *R/generate.training.R
ab43c4bd113b50d8ac5cb8c4a8071eb8 *R/map.R
aa8ddb6e02f7ff799e30ffe6960027c9 *R/optimization.GA.R
d85e2ab24dffd1184510680134fe34bb *R/optimize.features.R
872a229b117a12f312463196544a7b11 *R/random_parameter.R
45673cc119efbb35e5e6e5bdf7f752c2 *R/raw.alignment.R
030012ac71eaec30337cf371e573e78c *R/selection.R
b9505053b395e6b0c829d148abf0dbb5 *R/show.map.R
3151ab7574f769109b2797f4c1f7be0d *R/sysdata.rda
3151ab7574f769109b2797f4c1f7be0d *data/ALINE.map.rda
505e53a6a676892a522f5acff58a5d15 *man/ALINE.map.Rd
39b600623679ce14ca9e62ea7b7e1854 *man/ALINE.segments.Rd
c119b4bc575121cb69ca77b9f3a2c3a9 *man/aline-package.Rd
e9a4754b80ff4dc30bf25720fb6a7e9d *man/aline.Rd
339b9860763c5648044b0851a14b8726 *man/decode.ALINE.Rd
4c77fc9c4d855d4db13d51a404cb6aba *man/encode.ALINE.Rd
e10a19dad45ce46049dde6a3d3b3662c *man/features.plot.Rd
a9d034312b286e7f52be5189c285cbe3 *man/generate.training.Rd
13630387a03948071e92d84bd96b0742 *man/map.Rd
732d891bc013da1dda414e79785109fd *man/optimize.features.Rd
823ca5fe0b8aea9c80a32c62ef41f9fb *man/raw.alignment.Rd
217ad9ab192828c20681f0be8c0f74dc *man/show.map.Rd
18bd5c21506ecd77b00bfdb1198cd0a9 *src/Stack.cpp
307cc31eb8f1cdd5f3fb0e687db62cb5 *src/Stack.h
9dab85a8f6012895916f5dee41040f28 *src/Word.cpp
a88e553612c34d6fe34b7b1cf06d0473 *src/Word.h
ace1fc426d1ee9cb374dd87673f14f47 *src/alineR.cpp
3fbca4e5ef6f8ddb166957c8a3197f62 *src/glob.h
ae9f7c4ef8b21d900cdfd732060604d7 *src/wagner.cpp
f9c9d0296d44a490b237e8478a03e931 *src/wagner.h
