Package: babelgene
Type: Package
Title: Gene Orthologs for Model Organisms in a Tidy Data Format
Version: 21.4
Authors@R: person("Igor", "Dolgalev", email = "igor.dolgalev@nyumc.org", role = c("aut", "cre"))
Description: Genomic analysis of model organisms often requires the use of databases based on human data or making comparisons to patient-derived resources. This requires converting genes between human and non-human analogues. The babelgene R package provides predicted gene orthologs/homologs for frequently studied model organisms in an R-friendly tidy/long format. The package integrates orthology assertion predictions sourced from multiple databases as compiled by the HGNC Comparison of Orthology Predictions (HCOP) (Wright et al. 2005 <doi:10.1007/s00335-005-0103-2>, Eyre et al. 2007 <doi:10.1093/bib/bbl030>, Seal et al. 2011 <doi:10.1093/nar/gkq892>).
License: MIT + file LICENSE
Encoding: UTF-8
URL: https://igordot.github.io/babelgene/
BugReports: https://github.com/igordot/babelgene/issues
Depends: R (>= 3.3)
Imports: dplyr, methods, rlang
Suggests: covr, knitr, rmarkdown, testthat (>= 3.0.0)
Config/testthat/edition: 3
RoxygenNote: 7.1.1
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2021-04-24 02:41:40 UTC; id460
Author: Igor Dolgalev [aut, cre]
Maintainer: Igor Dolgalev <igor.dolgalev@nyumc.org>
Repository: CRAN
Date/Publication: 2021-04-26 07:40:03 UTC
