d5751eaaedef25b4e2cbf54d2ee245f6 *DESCRIPTION
4e3e00ba19d7a3fb08fe6ac651f21af0 *NAMESPACE
fdac44a540d7a60a152bcf3070d7f524 *NEWS.md
353106813cb4a6a12122ac2d26a07f4d *R/bayesdfa-package.R
dcbadafb0c3c5559cd4a88d314e72eb0 *R/converge_rhat.R
16c122ea46a21728c3fa6e5721cd84b0 *R/dfa_cv.R
bca4819c608ce10f769b5a0cd008b2df *R/dfa_fitted.R
b120716a9a10f44b97e5547440a1ea55 *R/dfa_loadings.R
45af7dc55bbe0defcb130d288fb87094 *R/dfa_trends.R
facd56705350b31bfba1145e4e27c065 *R/find_dfa_trends.R
33b0b2d3b9b53d4fe9bb904bc58da317 *R/find_regimes.R
43a6042920bae6a7719ec4877f6a15ab *R/find_swans.R
04b0988d534449b8c71cd07c68fa09a7 *R/fit_dfa.R
f1676f42499a2c7af31b830f786d1a4d *R/fit_regimes.R
e2e6fb33cb821c3ed74f6e9a6b56b666 *R/hmm_init.R
3ed6e5c74a26c4a52438337b6c6bc54e *R/invert_chains.R
2a771597f424164c008120e9b7448944 *R/loo.R
d70e565356cbc84f20adc6eb2d55f2b4 *R/plot_fitted.R
9bf7201cd0dfd1fa4e59861ae7e7351c *R/plot_loadings.R
85c45721d8ebb0c61c944416752ad526 *R/plot_regime_model.R
b5a9fae87e6952ccb4bb68f0a39f554e *R/plot_trends.R
ba21f1588c568dad6167b1f828ce8443 *R/predicted.R
1b999a46170d9ed275547a0ad799b70d *R/print.R
52222c53731fc94c7b8ce61a5d026380 *R/rotate_trends.R
6a9dd5aadedb5bdc287495d6be4adae6 *R/sim.R
bc125bad6f228de7856b0c436cddc43e *R/stanmodels.R
4bfdbb048b436565de03f3d92273a8f8 *R/trend_cor.R
5fcd035cda5bb7ab39d5324aa1768803 *build/vignette.rds
1cc60bdd8610449d30184e0bb374bf46 *configure
6bea7bdbd44ffa386677bfdec2d1984b *configure.win
94c9d26bd5a2b842f38a1013ca8e0010 *inst/doc/bayesdfa.R
d442354dd24e1726e427463d89d41ab8 *inst/doc/bayesdfa.Rmd
0d19393405ef7dd948f0a3c604afed40 *inst/doc/bayesdfa.html
99aa36688c9004fb4c86603828b77538 *inst/doc/combining_data.R
ba9b3649f41abf2229f8c6b0bedad83f *inst/doc/combining_data.Rmd
2028f12097a77bde4363d662b56757b3 *inst/doc/combining_data.html
c05d996e8827b95dcd88001053924e93 *inst/doc/compositional.R
f60ab823359753b0de92d70441810e7a *inst/doc/compositional.Rmd
d8fff58bc4426cd70a8b260dc8e93089 *inst/doc/compositional.html
aa639834f5740eaf926b6f0f1623324f *inst/doc/covariates.R
70d9f8a85a570c5b97bdf8e4da23b5ee *inst/doc/covariates.Rmd
ff4670a9269472dd1185a6fcd00ff10f *inst/doc/covariates.html
6d185f634e43ee0ded109a24c2c93a3f *inst/doc/estimate_process_sigma.R
384886adc8abd6f6d151874c1ad6d46c *inst/doc/estimate_process_sigma.Rmd
005fd5b4ab4899a51ee8eb78cbf41e98 *inst/doc/estimate_process_sigma.html
855c064dbf8deaff96c8dc8a87169109 *inst/include/stan_meta_header.hpp
78fba3e7c80d4f5971cbaa2036ebd4f0 *inst/stan/corr.stan
0b1a7bb8c4ca7a98f4318f2cb3254808 *inst/stan/dfa.stan
9b3c06125285624a1f02d2c35ddf3d63 *inst/stan/hmm_gaussian.stan
83af89cfffa9ddb2e6775950748d97f5 *inst/stan/include/license.stan
c52779d6f349c6cb4b53351fbefb7aab *inst/stan/regime_1.stan
d8e15a1ed216f8947bd7ffa25bc4b05b *man/bayesdfa-package.Rd
b40ea17b0e578b2441899f241207d291 *man/dfa_cv.Rd
a846ece8b1344cc88b25b3fcfde7e376 *man/dfa_fitted.Rd
50872a9c58487299bf30a1503d864d4c *man/dfa_loadings.Rd
a8175d0938d2c0029b9ce5c0cf70d228 *man/dfa_trends.Rd
21321976dd0484a19706d2bc197555d3 *man/find_dfa_trends.Rd
fe191bf7d543caf6f2e83a836fbf7500 *man/find_inverted_chains.Rd
75f8f179ef68a08c6829afe4982f3238 *man/find_regimes.Rd
a50ee2cb3928085e0d8eb6bb6505a79b *man/find_swans.Rd
115c6177aaacbaeee362d3d77b680973 *man/fit_dfa.Rd
8a9642058d0fe6c47f5d8ff2513223aa *man/fit_regimes.Rd
55c3ea8972ce6f50db9c129083d468b7 *man/hmm_init.Rd
3784208d8d7139aa5b6e79950d8b23a9 *man/invert_chains.Rd
49bb94437aadf2db866e16e01525eb74 *man/is_converged.Rd
d00ef40fa069a68729f99311b9a575aa *man/loo.Rd
db745dfbf1fd7a31b93cd3b7168f7321 *man/plot_fitted.Rd
013f6bda51e664b6305a49344f423fa8 *man/plot_loadings.Rd
fa53acc1e921ba3dde812b90c56adbf5 *man/plot_regime_model.Rd
9954ec0264856ba9859da86ccc215a7c *man/plot_trends.Rd
333a1fdf754db2dafb7fce2f99548519 *man/predicted.Rd
35bf20492c6d41b1a015cf28ef019162 *man/rotate_trends.Rd
f873f0696943403662232a157a184c78 *man/sim_dfa.Rd
7fa9b028a7c22ad1e5d6b0f119686e31 *man/trend_cor.Rd
ec1f7adc46f14d6b1c5481244554415e *src/Makevars
cebeb8bdd5adb558f381741990eb1085 *src/Makevars.win
a88968d4b1ff54880c6ba21e695f6d82 *src/RcppExports.cpp
04ed2bc4d36c502d99022a74496b2508 *src/stanExports_corr.cc
55336401c012f3a98d280f86f014cd5e *src/stanExports_corr.h
c40dccdb08ac00a3ba6289024856b080 *src/stanExports_dfa.cc
1241c56a2a76a3fb098e7ff26455a6c2 *src/stanExports_dfa.h
40ed8d1759567dbb111a985934dcaab9 *src/stanExports_hmm_gaussian.cc
c5b3b5d70b807c441686f4723d184734 *src/stanExports_hmm_gaussian.h
947002a6da74ff267e469559b2196ee0 *src/stanExports_regime_1.cc
4202a146f015f2c067d94bee6cee0e45 *src/stanExports_regime_1.h
ff7fd5b8bbe7dacd820ad654c0cac2cf *tests/testthat.R
63d9e5d08ddcea499ceafde026f7d0a2 *tests/testthat/test-chain-flipping.R
eed45ee05643cacc0c06b93c35af94c4 *tests/testthat/test-fit.R
d442354dd24e1726e427463d89d41ab8 *vignettes/bayesdfa.Rmd
ba9b3649f41abf2229f8c6b0bedad83f *vignettes/combining_data.Rmd
f60ab823359753b0de92d70441810e7a *vignettes/compositional.Rmd
70d9f8a85a570c5b97bdf8e4da23b5ee *vignettes/covariates.Rmd
384886adc8abd6f6d151874c1ad6d46c *vignettes/estimate_process_sigma.Rmd
