62edcc8f4c9f681346b0f98a7d66a8dd *DESCRIPTION
8b54e5a89fbda3af5e077053d40bec76 *NAMESPACE
c98413993a5f975d09247d1fdf5d18ea *R/calc.delta.errors.R
1c5f7b45653d94eeb4fee6597205eca9 *R/calc.p.R
bf5bac680e43749ba56b21ce66bd935a *R/consec.pairs.R
16e94cf43faa7007266f36e10a620717 *R/create.covar.R
a791b479de0567adc84d6f01ec47aa69 *R/delete.pheno.R
0623197aae12fd2524fb341c0646eec7 *R/direct.influence.R
83edb4c07a8934cb9251ef416ca1c6ca *R/error.prop.R
6f51ab609030d2102aed613cf2a79886 *R/genome.wide.threshold.1D.R
802ff5cb6183fa89d7d653db893b8d10 *R/get.col.num.R
9a7d45dcbd1c14215cf88d0ffbe0465f *R/get.covar.R
c2d6824c5ccb494d889f3585cd21945f *R/get.eigentraits.R
206dee3252108e8500cc9f8539e031e4 *R/get.layout.mat.R
8885a6dd2bb81c58a78816f0a603f343 *R/get.linearly.independent.R
53ec065b629a7e7a1735295afb918cef *R/get.network.R
7929011e0761f9fa0143e6ceedc58d3b *R/get.pairs.for.pairscan.R
ba6e61933ee15fa469d0e3d452639b0d *R/linkage.blocks.R
6076c7de30f5b2bf0fe92ab46b74ee2a *R/myImagePlot.R
82a6dccfb04cbb5cfa9a39dd1dedf4cc *R/norm.pheno.R
4557fd09affe7443c267f836103517fd *R/one.pairscan.R
bfd44b1ba6bc47a1ad93c5d19780da80 *R/pair.matrix.R
198de36af3097e59ec655fe9822f791d *R/pairscan.R
e9aaf5e13e94cd2e8faab7a5ca002175 *R/plotCollapsedVarInf.R
16956b29fe1f69b90db498bceccaa9e1 *R/plotNetwork.R
2b737d8d4d1c1dc237f492ffdd0d9cb2 *R/plotPairscan.R
2dca8b9907a1c71a59918810955be22e *R/plotSVD.R
ed7ee3549e79f689b5da8a0705174904 *R/plotSinglescan.R
50a2f73b5c49a7731773be6029349bf8 *R/plotVariantInfluences.R
c25af3fee9ab17a609bee3651d036643 *R/read.population.R
31940097c6e723c53d4295a453c6cde9 *R/remove.ind.with.missing.pheno.R
eb8946fc2c2b2225b0d1d27c8cfb4ab7 *R/report.progress.R
b8ab7d5aa5abbcd59a91452e8adeca37 *R/rotate.mat.R
68177759f8d641f8ca3a63567ce96f88 *R/rz.transform.R
1a16b27d9f0be331a5dc6a1e800d603c *R/segment.region.R
a65a633c00eee02afaaad4c7c31bbfa7 *R/select.by.chr.R
479a0351bad1a6a0a7bb7951b34a51c1 *R/select.by.ind.R
71fa1dd06a229ed84ab0ebeb55d90511 *R/select.eigentraits.R
639b128387f4728b867ee8a06ba743c5 *R/select.markers.for.pairscan.R
f9d8f81701a1ec87bf0b92ab3e58c278 *R/select.pheno.R
9316e002b6336be59a1fb19c71c02767 *R/set.covar.R
cde4948b8746c3bd0149322bba6d015d *R/set.pairscan.thresh.R
124c8ca37b86cc6b52dd1b183530944f *R/singlescan.R
3b41a4464d75e12451bf3e9cd3281b7d *R/writeVariantInfluences.R
d32c471890468d93e65a79f00192faab *data/obesity.cross.rda
b040db1b5f56b6021806e282db4796a7 *inst/doc/cape.Rnw
b56a686a120f67d67006d995055c2802 *inst/doc/cape.pdf
86614dd9c847df82d6ea056f730fa1b6 *man/calc.delta.errors.Rd
15a3fbbba88f712a95782455283c26c0 *man/calc.p.Rd
94aed94ee589ce59bd5dd66f1b46aef9 *man/cape-package.Rd
8e00302fb1355b3eeb4d69813a66537c *man/consec.pairs.Rd
36a2ac331fabf47094194f4f3875b77d *man/create.covar.Rd
6b837f9bbfe0c454a1d097c55eaad7e0 *man/delete.pheno.Rd
f145cbbed46e7baffc37f1426f06bb06 *man/direct.influence.Rd
1b379690deaf3481c284b939ec56c665 *man/error.prop.Rd
b2ba1c7c8dc27a6d57d58e396e1f50f9 *man/genome.wide.threshold.1D.Rd
88c3b818b2f6b4e2aac7aa737a8a8080 *man/get.col.num.Rd
c0b174744d6805823c94f30e1d4b4738 *man/get.covar.Rd
6bc260894f8fe7102201091ee61eb436 *man/get.eigentraits.Rd
01f700a8c949bca9b7fb0e39bab397ce *man/get.layout.mat.Rd
708d8ed01fc7c46bf466d2bc82bd033f *man/get.linearly.independent.Rd
92bb5386c624466bd2e91e061c2dddc2 *man/get.network.Rd
2f011e698f06c8a30df4dcecb7c0c565 *man/get.pairs.for.pairscan.Rd
382bf814ce626ee87508af767a250ace *man/linkage.blocks.Rd
3a8c801f6a8eedbd6fd09a96eee9370f *man/myImagePlot.Rd
30e654867ce331a8c49a933f4dd79c37 *man/norm.pheno.Rd
47ca416232c90649732a00c299fec037 *man/obesity.cross.Rd
93e645116aa434ded26e4b5dcdbbfe17 *man/one.pairscan.Rd
613a33e2e89ca928ab087cf9b56efc67 *man/pair.matrix.Rd
0af609c3810119d1d60f99ebf3144442 *man/pairscan.Rd
cfa26476f980c709f273eb883714c646 *man/plotCollapsedVarInf.Rd
c17db5207cbfdc8d733aac36f3d7740f *man/plotNetwork.Rd
c64296ce64d2e6dd90ca8813fcd58d59 *man/plotPairscan.Rd
f93d3d87084bc9af499c54c858fe2f07 *man/plotSVD.Rd
cc176828a6c71703457eda3c81752994 *man/plotSinglescan.Rd
009cf04df610b4c81dfd002a64381b63 *man/plotVariantInfluences.Rd
7899ec94e37fdd806635dbc1b8e441d3 *man/read.population.Rd
2561a1076ba688dbd12e50d158b335c2 *man/remove.ind.with.missing.pheno.Rd
b5bd575e05d582178db496d78b4f2005 *man/report.progress.Rd
ab1e236b469e40f26b72508e8bfc15a5 *man/rotate.mat.Rd
da4a5f4ee395b95ddb9d36a1e6da7b5a *man/rz.transform.Rd
102a826d4e1c4e342b3288b244b269eb *man/segment.region.Rd
02f3ff7cebb6e69f1539e10f31abe848 *man/select.by.chr.Rd
b304e2f824248dd07b87a3b1263ba5f9 *man/select.by.ind.Rd
ed606afa797d4bda7ebeca3daf8a4733 *man/select.eigentraits.Rd
decccb9d137a088a678ee5c6cbef947f *man/select.markers.for.pairscan.Rd
fa0eeb3dccf8217b254c3b4218ebb634 *man/select.pheno.Rd
4b5cf535e134cd1f4b1cee635b8b313d *man/set.covar.Rd
94dea8402d8fa4b725a8366b8aa043f6 *man/set.pairscan.thresh.Rd
5c6336efda7d0079f1187f4468007260 *man/singlescan.Rd
3796fdffb47b6a05532594b6fa217170 *man/writeVariantInfluences.Rd
