ff92c6f425c8990e28839e61c88ef3cc *DESCRIPTION
608ee5c9841d1484dd0bb2e9111a847b *NAMESPACE
e40d242cfd7b99649040bdd9defe1696 *NEWS.md
c49d27425db76a335eefa89fbc7cd02d *R/CalibrateSingleDetermination.R
8c598b9565c5b1619704bda8a47233b6 *R/DPMM_helpers.R
3812e8ed6a564ab6a87b51e470f70aee *R/FindPosteriorMeanRate.R
1af936402aea495edf630794100eb217 *R/FindPredictiveCalendarAgeDensity.R
09c1636d579b1b69dddaae0fe412f144 *R/FindSummedProbabilityDistribution.R
b1a4d237a7bc54076dd449c7341503a1 *R/GenerateOxcalCode.R
ca496aba4854535e407dbf0468a25f87 *R/InterpolateCalibrationCurve.R
a0fc6b58adf4192837877ba383bcb31f *R/PPcalibrate.R
fa9ce2263f828e9c03d85e9708834dc2 *R/PlotCalendarAgeDensityIndividualSample.R
ed428d676afd113bd269b2a2613c18ce *R/PlotConvergenceData.R
34931d01db11eac1bd5f2fbf4b49caf8 *R/PlotGelmanRubin.R
8b77cff0080c3aaedc812c3b0badfc3c *R/PlotNumberOfClusters.R
43289d67c55b668b6bf6421f1d55d50e *R/PlotNumberOfInternalChanges.R
1fd49a0641398ad1872473441fd24b15 *R/PlotPosteriorChangePoints.R
c97dc2464f26d4ea06f720c35833253e *R/PlotPosteriorHeights.R
a87b6e82df59e328714c9f9b554a8e50 *R/PlotPosteriorMeanRate.R
b67584b31a0815aafa13fce81845b22d *R/PlotPredictiveCalendarAgeDensity.R
1ed8c6edee0de934c43360fb53c669bf *R/PolyaUrnBivarDirichlet.R
73c4ca4c4301c0b79cc2c95135ee5879 *R/RJ_helpers.R
4c227b300ce4e8990357ca58871c2842 *R/UpdateCalendarAgesGibbs.R
6b888c3954ac44103d6cb250c9a2d25e *R/UpdatePoissonProcessRateRevJump.R
f0969f582b74dfe46560324ba2b10e1f *R/WalkerBivarDirichlet.R
66c1aff40e91b39d90135c0283b3acec *R/carbondate-package.R
9ff5ed81ee870e9e614028fa4933c93c *R/check_arguments.R
e6c3bc7bafae6e514cbc159e83f07aba *R/cpp11.R
afc3341cb42ef6d8d5e3e7ac0e71c28e *R/data.R
4e6d7543acd3f931d32f2867951bff82 *R/plot_helpers.R
5f2e3986660929ae0e63e6ec1389d8bd *R/radiocarbon_scales.R
41291612a698ea3466fde9724463d10e *README.md
bd21d6f6027ab2fe7a0ed5701ca1c582 *build/vignette.rds
c03771c841fd189356a49eb5df9157bf *data/alces.rda
9990ba8bde5b2fbea241a6d933a02025 *data/armit.rda
fec369a7cb2cb439566588c516139c6e *data/bison.rda
4eea2041257717edf77b2a5d85f5b779 *data/buchanan.rda
63c956908b58b0198aaf915038414f9a *data/cervus.rda
eccc35d4af2602bb129c2fbeb79d50a2 *data/equus.rda
4245d0a474a849547c4e00705fdfceb6 *data/human.rda
fbba3daa372b64b40c5484f8e90a04a1 *data/intcal04.rda
9cacdd2d8234be69db0d2d9e7987f279 *data/intcal09.rda
45424da78eb2695a7fe8b19e17ea3020 *data/intcal13.rda
f6b4eafca95460d1c35ea5224ef88982 *data/intcal20.rda
5f89a33ee58feb11b6a1773257bff0b9 *data/intcal98.rda
27ec897f38b8aa559b9e3621f04f376f *data/kerr.rda
527dda7de78762babc1981c0e492ba34 *data/mammuthus.rda
3444d02d43254b356bc9c3a83caa472b *data/pp_uniform_phase.rda
cc985799aa3e83306304d62f7301a498 *data/shcal04.rda
62835b45577e5f2186d9a2e4aac5ab73 *data/shcal13.rda
48aee59b16eabde6f20885a8082b1b5d *data/shcal20.rda
2390df9d2fd7290fe3b5a8f0d82988bd *data/two_normals.rda
69c510eff2eeaf313f18a1a8e346eabc *inst/CITATION
1cff78346f4b154523d910c03ad9edf6 *inst/doc/Against_SPDs.R
4b6d910f27746fb69a7aba2e4cc58638 *inst/doc/Against_SPDs.Rmd
6e4e896309b438c724b23630976296a6 *inst/doc/Against_SPDs.html
9f98bee74f74db38fd63ad3f4c8b35f0 *inst/doc/Independent_calibration.R
bcef150e071838b526e01200352baee9 *inst/doc/Independent_calibration.Rmd
d2191983307f331eb2b682ee0f101d77 *inst/doc/Independent_calibration.html
5c4529d86339b8081b75ca400ca04f73 *inst/doc/Non-parametric-summed-density.R
d09be9a02c5e61f56e5611fd3d271952 *inst/doc/Non-parametric-summed-density.Rmd
e29543e26792dbb55a549d48e3b27a2b *inst/doc/Non-parametric-summed-density.html
d53d8c95f031040b087eb55c22339f35 *inst/doc/Poisson-process-modelling.R
e7b33de7108d1104db6f5fca1ec8de6e *inst/doc/Poisson-process-modelling.Rmd
8f971ab7da836e346e9120e4b6488e07 *inst/doc/Poisson-process-modelling.html
69e0439397fc2de03a713455c70c10e1 *inst/doc/carbondate.R
5c12b7f7d9f6b778bb78da88bea1dd94 *inst/doc/carbondate.Rmd
1ba19250b347a087319c5a646007af8f *inst/doc/carbondate.html
7da7dd6d3eb53168ca45114652d2130f *inst/doc/determining-convergence.R
db0a8f1b06fedb56fb399c49904fb5ed *inst/doc/determining-convergence.Rmd
cbe921a20ee2efe365f012819003c82b *inst/doc/determining-convergence.html
746bcbf7106172e678dcd47cca33b89c *man/CalibrateSingleDetermination.Rd
ac084e5ef0d5a66312f18418934767bb *man/FindPosteriorMeanRate.Rd
c2c63cda652ddf37ea3e72954b4ca087 *man/FindPredictiveCalendarAgeDensity.Rd
6821bc90a61d1f48e9d0e2e1e622a58a *man/FindSummedProbabilityDistribution.Rd
7898260cefd2aac40de52a9147caef14 *man/GenerateOxcalCode.Rd
1c197ac1ad8105b37a9b3115641510f0 *man/InterpolateCalibrationCurve.Rd
122c6c840332eddf74c6c11bc6034151 *man/PPcalibrate.Rd
71e8a48c53f262b39b9a6ef1c10475ef *man/PlotCalendarAgeDensityIndividualSample.Rd
02544df0df48c17dbed8734567da4f72 *man/PlotConvergenceData.Rd
756fcec6af96027606915781aaff4bd2 *man/PlotGelmanRubinDiagnosticMultiChain.Rd
66e8636c832ebb8d9d34d83d4bff8abf *man/PlotGelmanRubinDiagnosticSingleChain.Rd
37bf7e47f38c84a2ded93489e15e7da6 *man/PlotNumberOfClusters.Rd
f07349d797959a766b58f53af971345c *man/PlotNumberOfInternalChanges.Rd
d91215bd4688dcbc6b479da38ea483f4 *man/PlotPosteriorChangePoints.Rd
88e2d63717752e4b9b0e1aa277f0c8f6 *man/PlotPosteriorHeights.Rd
0d157ee08f05903ade0980e97e3f1889 *man/PlotPosteriorMeanRate.Rd
439ba1fbb03d171bc7ceae00f86eac15 *man/PlotPredictiveCalendarAgeDensity.Rd
98fd1a50bf56392a59bc0ff7d1ccffa4 *man/PolyaUrnBivarDirichlet.Rd
f67d853ea427806d9d69a1035809e6bc *man/WalkerBivarDirichlet.Rd
3f3d8393130281339dc7b31cacc98052 *man/alces.Rd
701f78f5f062ae0430d5756486a56e72 *man/armit.Rd
bd1028ec5f76154fd4a239ddb412b32c *man/bison.Rd
3091af74b2731404b008d0678c6d573d *man/buchanan.Rd
79da9eb2dc2a8eb0d02816f37a2b73a7 *man/cervus.Rd
58df1a0e33106aeb553bd81e6eddb9fd *man/equus.Rd
5dd94f0dd55e6061ace4e7a578319d98 *man/figures/README-calendar_age-1.png
e1e659001e0216e66cd4fb43a2bde378 *man/figures/README-plot_density-1.png
e4ba657799bf96763850b5524d3277d9 *man/figures/README-plot_mean_rate-1.png
1ead7fc0481e9de656d52128b5e9dd39 *man/human.Rd
d96b9b8d8c161665f625f658edd2fad0 *man/intcal04.Rd
b9ce30a84d17ae4bae1f99b7d3f5b523 *man/intcal09.Rd
de42fdc59db875af91e0ae4275b5c0f8 *man/intcal13.Rd
3efe5dcc46096e77875f606807213fdd *man/intcal20.Rd
ff042d4aba4b510353fa5392e6eef1f5 *man/intcal98.Rd
712b68c14729cde2d7fad48223a3c03e *man/kerr.Rd
4a0aaca57df46a291c8387565fa8e602 *man/mammuthus.Rd
9e483ec3c9170ff4508314edb9c01e3a *man/pp_uniform_phase.Rd
5ec337632f2f53769ed16483958bcc33 *man/shcal04.Rd
f90e1e77f769e10d7e9123d77609e7b2 *man/shcal13.Rd
8a71434517c8960de63d0ca04e566657 *man/shcal20.Rd
1e8a84d868d5760e56228fb787e39198 *man/two_normals.Rd
2766ebfef6950c24cbcd367f837511df *src/cpp11.cpp
be5d3e4eef19c51441159fc02c922568 *src/find_hpd.cpp
82d415d58fa0d8aa652b0ec425c9bf0e *src/find_predictive_density.cpp
f470207b3ecb7695c26c5020d76db085 *src/local_rng.h
5bc108227196e69abefde3bd781f0eb9 *src/polya_urn_update_helpers.cpp
aa6ce555f4bd723ad4a159757ca2a23b *src/polya_urn_update_step.cpp
952bac67354e3318b67b4fdc4ecf7393 *src/sample.cpp
6878f73a65c5840fd10dbd03b1967dbf *src/update_calendar_ages.cpp
a86b26734a1b237ac755bf3a282f1005 *src/update_calendar_ages_rjpp.cpp
18b78400390f92c5f12d242f377c8e29 *src/update_helpers.cpp
7444019d1cb0ca0025951c3b34569e9a *src/walker_update_helpers.cpp
3837d5a7a9972b3340768c595b4fd74f *src/walker_update_step.cpp
152751c8d2240c9f54f8f21fbabc2866 *tests/testthat.R
7354586f47b764c79e62345610ae1e53 *tests/testthat/Rplots.pdf
592db006451291505dd05c3fad71bd1d *tests/testthat/fixtures/LegacyBirth.R
640fb8e8878bc31d0db9a17e806c6c44 *tests/testthat/fixtures/LegacyCalibrate.R
9914e89ba7dac7c6bb62f221b58cf25a *tests/testthat/fixtures/LegacyChangeHeight.R
98f2ec9e1f02e6a673bc7db609b813a0 *tests/testthat/fixtures/LegacyChangePos.R
38c97231a1e7d3563c12141a748e280f *tests/testthat/fixtures/LegacyDeath.R
3f74c9a5d3374a31eeaf728c9e8630f2 *tests/testthat/fixtures/LegacyFindCalPrior.R
6a04d751e12cdce77e41897280d4278b *tests/testthat/fixtures/LegacyFindMoveProb.R
00e2ea6ce64d3c776bf3ae2931d5c466 *tests/testthat/fixtures/LegacyHelpers.R
2f9b3d4a54e230c0667bfdd46d045aa4 *tests/testthat/fixtures/LegacySingleRJUpdate.R
3e1c7c4f7eb0c1087177191c044dd899 *tests/testthat/fixtures/helpers/NealDirichletMixtureMasterFunctionsFinal.R
f0ed630e73dc6b7d69fa69a348fdd0fe *tests/testthat/fixtures/helpers/NealPostProcessingFinal.R
ea4f365056ef3b72858a250f98ddd315 *tests/testthat/fixtures/helpers/SimStudyFuncsFinal.R
71fce36f09b49fafc665f0a046488f2d *tests/testthat/fixtures/helpers/SliceUpdateFunsFinal.R
a5c414c1af903837c153039191b7e6dc *tests/testthat/fixtures/helpers/WalkerDirichletMixtureUpdateFunsFinal.R
572d55620b50bdac03b387ce89184084 *tests/testthat/fixtures/helpers/WalkerMasterFunctionFinal.R
d94ba22696adb1bd2bea7bd2a0c01d2a *tests/testthat/fixtures/helpers/WalkerPostProcessingFinal.R
0dd81bf871edb52645707a1a87e6f766 *tests/testthat/fixtures/helpers/intcal20.14c
9c66b8085279e5b08bd9896a5e5fb391 *tests/testthat/fixtures/helpers/kerr2014sss_sup.csv
845d65f77d2ec032b72d5207c7386d90 *tests/testthat/fixtures/make-polya-urn-output.R
84b34f3121376a7a1324c191ff85619d *tests/testthat/fixtures/make-walker-output.R
6cf260af7f8ebab42d1849c71297f1b0 *tests/testthat/fixtures/polya_urn_input.rda
d08218bc5887c9fe40f8a81224bcbfa4 *tests/testthat/fixtures/polya_urn_output.rda
9c6b87e53ee943e66777d6b2982b769b *tests/testthat/fixtures/walker_input.rda
69e565817ca6f566554bbecb9c734ee1 *tests/testthat/fixtures/walker_output.rda
41439d6b8ff75b69ac3893f7b62155f8 *tests/testthat/test-Birth.R
4f1586ad0d1d5ff1390625d66a8ba47a *tests/testthat/test-CalendarAgeLikelihoodGivenCurve.R
2afb94388a96e5e6defcb9a04605022c *tests/testthat/test-CalibrateSingleDetermination.R
e2270908964f7f91a8af0d65de73ed1b *tests/testthat/test-ChangeHeight.R
f961a5681f3ac24b15fed4f2b5c86b0f *tests/testthat/test-ChangePos.R
d8a3cfee604301f7da9cad5ca9c9a555 *tests/testthat/test-Death.R
d1660720d14977e769cc5288ce1f93a2 *tests/testthat/test-FindCalPrior.R
ab085634d5b06591bd481d7022ba6042 *tests/testthat/test-FindMoveProbability.R
cba4f164576a99bf3133a67d6b8fafc2 *tests/testthat/test-FindSummedProbabilityDistribution.R
544d597db25b5eac80ab3a8e6662dd4a *tests/testthat/test-InterpolateCalibrationCurve.R
216a85b21b75e0d179db2d35ac0c8cfc *tests/testthat/test-PPcalibrate.R
eb49ee2223d731a1419ab68e3df30dc9 *tests/testthat/test-PolyaUrnBivarDirichlet.R
4edf8b3cfd21ac26524d0e1b9e479fcc *tests/testthat/test-UpdatePoissonProcessRateRevJump.R
3c4140f530329cb036d743a57dfda48a *tests/testthat/test-WalkerBivarDirichlet.R
94e20f25e93084e1a777fb6c32854ba4 *tests/testthat/test-check_arguments.R
4b6d910f27746fb69a7aba2e4cc58638 *vignettes/Against_SPDs.Rmd
bcef150e071838b526e01200352baee9 *vignettes/Independent_calibration.Rmd
1f833764a7a406f01c395c840c9b7cb9 *vignettes/Non-parametric-summed-density-short.Rmd-in-progress
d09be9a02c5e61f56e5611fd3d271952 *vignettes/Non-parametric-summed-density.Rmd
e7b33de7108d1104db6f5fca1ec8de6e *vignettes/Poisson-process-modelling.Rmd
5c12b7f7d9f6b778bb78da88bea1dd94 *vignettes/carbondate.Rmd
db0a8f1b06fedb56fb399c49904fb5ed *vignettes/determining-convergence.Rmd
83e25586e25e90954961cb19a5a9d83f *vignettes/figures-convergence/calculate_gr-1.png
decda4b35be923a1969ec316ffe4b692 *vignettes/figures-convergence/calculate_gr_multiple-1.png
7448f06d341305d5b1a221341aa5e8e6 *vignettes/figures-convergence/calculate_kld-1.png
e0b6c7716b263d98eae5170f600c22e5 *vignettes/figures-convergence/calculate_polya_kerr-1.png
1c31ddbcf903b8a9091b8ac977f1caf7 *vignettes/figures-convergence/calculate_polya_normals-1.png
08d16f68dc60873cd5eaff061bf508eb *vignettes/references.bib
