8a8830e3b9ad90578fbcbf87be672cfd *DESCRIPTION
6c94f0e0b4c6d34780222017fa786c9d *NAMESPACE
fc14ef7d8200f21e9c9fa51d24487a8c *R/1_cghRA.design-class.R
f724645e9158235cde251079058b66eb *R/1_cghRA.probes-class.R
0345880b25e930f5aad89dd9c7fff508 *R/1_cghRA.regions-class.R
87d2f166dc8c6907c425df7fd83904f6 *R/1_segmentMap-class.R
b746ef9f200f4d4bfe786f32d7e57349 *R/2_cghRA.array-class.R
2c858ba52c41b5c2e4cc71da09a52179 *R/2_cghRA.copies-class.R
97303adcf4a3a3078160712169e754cf *R/3_cghRA.series-class.R
0734d98438a2297ef4ab50fa5b717d6a *R/Agilent.design.R
270a20134f68e51f8c68792f10bfe851 *R/Agilent.probes.R
00df2962f2fe6c19d4ee73b851e22407 *R/GEDI.R
4b0c161a6ba56d58766640572487b838 *R/STEPS.R
b0db9ace690e91512aaa21c08394cdb5 *R/WACA.R
2a6776a583e01a6daf82a4bb7d0a32c6 *R/applyMap.R
905cfa1464a1b4acae1c7b401a211fe4 *R/bias.R
a934ccb90b366deef19149ef018d3656 *R/blatInstall.R
60e35c8736acac3ee6fcf6f3af35d16b *R/cnvScore.R
652961019239493f3f46f1c0fa6b9a9f *R/copies.R
1fdb46e316d20ef67f0a225f22c05013 *R/custom.design.R
f58c1a17af07291923fefd4e81b7ef60 *R/custom.probes.R
d57c8a60c8bc8db35fb60b10c3ff42ad *R/drawableFromClass.cghRA.probes.R
f4b374715fe2290862157b442e34ec09 *R/fillGaps.R
9f13c27d5bd32b0aa5175075a66856f6 *R/localize.R
cefaf8039538d2e1cff61d96a4c1c07d *R/map2design.R
aa88d34a51552c10393ca78bf3652441 *R/model.apply.R
238203e924c9a76fc5ede98571d17912 *R/model.auto.R
d826e5da909599be00d8e121dcdac919 *R/model.test.R
13bfc9054732d7ebe765254e47ccaf18 *R/parallelize.R
ff7a125e75fc9fce240a6fb71b93c5d2 *R/parseKaryo.R
1a06c6ac265e8bde33b6228614940713 *R/penetrance.R
721362615a28a7e2feb0b47d7f98952f *R/process.R
8bd442eb32398129a260f0c062acff73 *R/process.core.R
8c0697beff0dd603a13bd63eededd233 *R/process.default.R
082dfa4d156a488684696e74c0a4e65b *R/process.log.R
1a0954bc31be13dd37c05d8e935a999a *R/segPile.R
b76a76c4a0edbd7162d9d63dc8eb7b94 *R/tk.annotate.R
6929595b4c374587b20d2f1c20f03f82 *R/tk.cghRA.R
c2b08156b60d961ecfd0055d37899058 *R/tk.design.R
cc48651c98f2716f5a96979495fa596e *R/tk.modelize.R
d22658d57ab32a16824b001753609eb0 *R/tk.process.R
458cb0cfc69d60d84f8bc073ec754f49 *R/tk.series.R
7496f34fbf461cba4320d8d7bd68f617 *R/tk.value.R
0c19c83e27110e2bc5179996abb2276d *R/trace2track.R
7860636c725c8227ce77c9d29d65bdb9 *R/track.CNV.DGVsupp.R
e291a8747bff86dd945abd4dc7340eb2 *R/xRA.R
a7131c0da6f30a8d6eda139e5cede7cb *R/zzz.R
1cbc96f134caf02ca26dbba17612be24 *README.md
a9e5fa2fc3f77b91c713e809d4e19d8a *build/vignette.rds
6600a7c110289131141fcabc802a6fe6 *inst/NEWS.Rd
85d2ceff09fd451e9e651588ebe0bba5 *inst/cghRA_16x16.gif
e7d67106dd7dfec91ede6d3108b304de *inst/cghRA_32x32.gif
a6fadc3434dff70641754badf51041a8 *inst/doc/Howto.R
8424fa98ec9cd9a504e85901a261c094 *inst/doc/Howto.Rtex
73c174e0b4bab429747e5d54413c1f5b *inst/doc/Howto.pdf
2848d447a4b70108ff8f5e4da28bb438 *man/Design_file_parser.Rd
bb1a18cf1a1d2308ad3f56c4b2e35319 *man/GEDI.Rd
7e4c0f5b9bb0a50a7aad3ba5545c84f2 *man/Probe_file_parser.Rd
6b0c6c7a99594a76d74a9e4d4e5b47af *man/STEPS.Rd
a22ca0f98c2f1091e9f75945cccd9017 *man/WACA.Rd
8321c710d69e65724605691d64097c81 *man/bias.Rd
eeb87654d35433295fa79dd63c5ea69b *man/cghRA.array-class.Rd
437ba06e8c994644f2a08fc991363cc9 *man/cghRA.array.Rd
0b0f77fa77a9ef735ebe1c59bf2215b1 *man/cghRA.copies-class.Rd
4404a88fdc111e66bfcf37d8e9166a23 *man/cghRA.copies.Rd
beecce1b57a1a37aa446b30d31d71612 *man/cghRA.design-class.Rd
69be364a1d3415469a4dd1dc7900e85e *man/cghRA.design.Rd
6f028a4f9c8f9ddf4a4321d15b41d489 *man/cghRA.probes-class.Rd
146354af8caf8a9018f93dbc63f30dfe *man/cghRA.probes.Rd
3ffe98b69b3d3cd3c8c944fc97fa412a *man/cghRA.regions-class.Rd
ca128e82499bd55f0c5163a6a97a8fd1 *man/cghRA.regions.Rd
1002ee75aefba82b20847535f6fa8d28 *man/cghRA.series-class.Rd
f4b67c16ca32de5ea27f2662bba90dfd *man/cghRA.series.Rd
80314fb4a4f832996775bba793b8f5bc *man/cnvScore.Rd
311576a00ab0e1aa2461fbe57a50886e *man/copies.Rd
3304cc3c427a9007cc5a364168f81b8d *man/drawableFromClass.cghRA.probes.Rd
20be79a04be3571a584b1de0aa699a89 *man/fillGaps.Rd
2ed2f95f87da40ad9ea1a0b3fb637baf *man/localize.Rd
54f6117fea5383fc33661fc609dc72a0 *man/map2design.Rd
9ae4f95883e06d7f532b10e11426742c *man/model.apply.Rd
fd9f0677e02faff8a54bd23ea24615c3 *man/model.auto.Rd
eefb95fa3c320f3ba3f5461564a380bd *man/model.test.Rd
b12aaa2aa9da9c151cb16ee2e2e0656f *man/parallelize.Rd
d688d04ba90888050baa94358897235d *man/parseKaryo.Rd
96d4312e798953c1f19312636e031063 *man/penetrance.Rd
036e7d9280485d8f0ccd8603b5964b1e *man/process.Rd
e7ae8d02dd7fa49345fe9af01be48fe0 *man/segmentMap-class.Rd
ed25fe0d366a75781ebdfcf3895f3233 *man/tk.annotate.Rd
d493a02ca0c4130ce67f4db375e1e7f4 *man/tk.cghRA.Rd
b2827cc0ba8c54896c379d0da909c55f *man/tk.design.Rd
f87cbf20646803e6367cc1287af4faf5 *man/tk.modelize.Rd
7462917bf6a2e8841c95bd7f056cc9d3 *man/tk.series.Rd
36cb09fb3984a1dd69eba0ae02e9e12a *man/tk.value.Rd
71c821ff400a4be86a44aae89392a5cf *man/trace2track.Rd
977e81d63d19cabdaef2cdf3c6cf7bf9 *man/track.CNV.DGVsupp.Rd
7aac24675a666c9c53e15f605558a358 *man/xRA.Rd
7ad74067a5a0c421db40810511a50439 *src/R_WACA.c
5c1a696bc5c56ae9dc9662e64ac33c74 *src/R_WACA.h
9579ec2a4117fb164f523d24bb6ae05f *src/cghRA-win.def
8424fa98ec9cd9a504e85901a261c094 *vignettes/Howto.Rtex
0aceef020666e6ca26d2ac1703d17891 *vignettes/images/Rgb.png
b08649b7f068df8da3218eefc24ea8d7 *vignettes/images/Rgb_CDKN2A.png
cd88fb40ef4b6c7841399434a68b7a3a *vignettes/images/annotate_bands.png
3e01e21ab7be11997cfc3b625ba867f5 *vignettes/images/annotate_cnv.png
1912384733c548ecccf6f72eee05ac5e *vignettes/images/annotate_genes.png
35147cd87779f99260621796b05395f0 *vignettes/images/array_CSV.png
b33a77f48209009a264b3696a2d1831c *vignettes/images/array_agilent.png
0c2f2d00cd739fe044368446f4f250e5 *vignettes/images/array_custom.png
8bce424e830fd49fe2acf4ca8022407e *vignettes/images/array_example.png
bf7022c1da50864075e308241b56b8f8 *vignettes/images/cghRA.png
f818b183ccf4f581a87200ac99010173 *vignettes/images/design_ADF.png
34e8215a637d74ae29f4921c64cb50f6 *vignettes/images/design_CSV.png
47440c8eb9069010f95347bc39ca26dd *vignettes/images/design_custom.png
bda02a102fb39bdcccd7d4d78de4df0b *vignettes/images/design_remap.png
5282d4cd1ad2caa58a1c64e2766ced7c *vignettes/images/design_simple.png
e00cef29e4689b054d8719b5dfb2678f *vignettes/images/design_waca.png
841ba8c97f7d52025b12208f8651f5df *vignettes/images/modelize.png
25018354e0bda310fb35f583e5568494 *vignettes/images/series.png
bbcbefe74353c6cc9b25fe38924fe756 *vignettes/images/singlePlot_pen.png
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339098237a4352a83e7b9a9b588e6c7f *vignettes/images/spatial.jpg
