eb72a392e375dc418b30a7da64cb3861 *DESCRIPTION
5164cffcd6bdbf86a1d2b86ea56260b6 *NAMESPACE
729a10a1ca3b92052e3af5dd42d02363 *R/HDIbetabinom.R
0e29d7930e1fd69b7538871bff80902d *R/bbdml.R
f578dd2dc1e807452e95c7e866f0daef *R/checkNested.R
76b4709087765f50563f38bdf8c67fd7 *R/clean_taxa_names.R
632e48577c5ccd4cd7740f6b0ab93412 *R/contrastsTest.R
6eebb084a6074b03f4e2a93df10ca071 *R/convert_phylo.R
db6348a2d5f66eaaf7aacec8593046d6 *R/corncob.R
8259665234032fda5ae911ff9353b7da *R/dbetabin.R
819731ffd8d967ec10699809b9d77d99 *R/differentialTest.R
a6040ce6eaccef78bd27e9e26333969a *R/doBoot.R
f280bf0867c64774b2400ec806d7b8c9 *R/genInits.R
beb3561ba45614031fe6d2575170564e *R/getRestrictionTerms.R
d431f79e59cc848c022f5fbc20ff49be *R/gr_full.R
e4c1e198e07de86cf198b8391acf7ffc *R/hessian.R
010dcacae213f4390dc34b98cd64b227 *R/ibd_phylo.R
48699fbb7c3344b066726012914f1e42 *R/links.R
73b1a0995d3425568d75ba454b3af9ec *R/lrtest.R
4d83c16abd1a342a1844b754f56c54e4 *R/objfun.R
60480ba6eb99fb5310c019ad758f2dd2 *R/otu_to_taxonomy.R
3d967d1667db4ed2c7398031083efb03 *R/pbLRT.R
4a10824ea867471b6b52037ce9898757 *R/pbWald.R
1d55cf62051bc149da8b71d2403c1079 *R/plot_bbdml.R
3067f9f3c6f88800c73509ba5a470c29 *R/plot_differentialTest.R
69ed9a3e44b204d61cfbf5612145869f *R/print_bbdml.R
ceb8f1fd9b18dfadf2da19f4b7cc3175 *R/print_differentialTest.R
e16516613904a370fb589393d9dc521a *R/print_summary_bbdml.R
f34d0771d1e4a4a322e71ae535d76338 *R/qbetabinom.R
fbb8eca24186eba51fbdd5b03349aeb9 *R/sandSE.R
4fadef236a259fc7b9dea850302501de *R/score.R
d4b39350913dd631a9eb31ceb7a0910f *R/simulate.R
c00d4c8d737a91d068f745e2763dbe73 *R/soil_phylo.R
79c565e14c1cd181c324aa1cea86c8fe *R/soil_phylum_small.R
8fa34b6cd028711a660954cd035ccf74 *R/summary_bbdml.R
f46eee89eb79508ed86c64cf61526f57 *R/utils-pipe.R
de0b0256011d7fab7b94c8e4c5c370b7 *R/wald.R
6f73e3dbccf82d182710ac8d26d490d9 *README.md
c434887d64c5778d243c60c7c29a88b8 *build/vignette.rds
de318eed9dff9ede3f7e59a4b044ac5b *data/ibd_phylo.rda
77962873b30019109bfea155381c0b2d *data/soil_phylo.rda
5035d27e2c5a3634f2c3235f526840f3 *data/soil_phylum_small.rda
300bd2fe47feca1700fb61f7e4bea3cf *inst/doc/corncob-intro.pdf
28cfa4371a37a0ea11bc4b8dd96d4fa4 *inst/doc/corncob-intro.pdf.asis
17a1d2595378556c31d9c63ed4b46374 *man/HDIbetabinom.Rd
e957b2db0383230f33e9be49f70b6e6d *man/bbdml.Rd
aa6cd37564303c5653facc97ee7fb6d6 *man/checkNested.Rd
cd8d4dee98b782b890876fc9976d2807 *man/clean_taxa_names.Rd
24561513f21d307b4510f6cad3b794e9 *man/contrastsTest.Rd
150fda122772f1b72e1ddee39d7d698c *man/convert_phylo.Rd
02941f0f2438703c880532c71a9ae3dc *man/corncob-package.Rd
3184ac37aad0f43ca8bbfe68545fdae2 *man/coth.Rd
a45ea75083a07c4d404c9e6aee60cd30 *man/dbetabin.Rd
151ca938630247f9a445a51e8c5b98d8 *man/dbetabin_neg.Rd
9a9b5e0a57ccc2a0f7332761c1a2a4e8 *man/differentialTest.Rd
47f05ea739704550b465370a33ae95d8 *man/doBoot.Rd
a419d577ef272ddb17fcb39531ffc0b4 *man/fishZ.Rd
fe6ed22db848f7784689453fc9551c4c *man/genInits.Rd
4b410905540c37c0a0dda1d795cdc69c *man/getRestrictionTerms.Rd
505f4530a7faa16782b41877feb45a39 *man/gr_full.Rd
fe1b9db1bcc10d3b7b9c0bde8663a7bf *man/hessian.Rd
a0e6c0a0fd0b190dcf7daa62a692c168 *man/ibd_phylo.Rd
bfa2cbf039950278b434d57ce164dcac *man/import_phyloseq.Rd
9806aa3c24649026f14f5da2e8d753a8 *man/invfishZ.Rd
ac35241d2ae20fe1f4179d22d5ded1e6 *man/invlogit.Rd
10889276bfdb43cbc3a8dbb61e6be2b7 *man/logit.Rd
f4103684ff37653d7cfd97fa9439680a *man/lrtest.Rd
c697dc694c6080d6b48d918ef421e575 *man/objfun.Rd
33ee62bfbb871404cb1b363fea2c314f *man/otu_to_taxonomy.Rd
1c6bad92f9229b8be831053c5da1f803 *man/pbLRT.Rd
92361b0558fed8f6c8ca0ac96ded90e7 *man/pbWald.Rd
7f36bfef193518d16718b536c8063a6f *man/pipe.Rd
c2408c3094943c4a1d544d57f572bbbf *man/plot.bbdml.Rd
a7f9b8236e59a5a4ce5a4a8fac1cee1b *man/plot.differentialTest.Rd
304ea664f0e8d891e7063c1cc83afbe6 *man/print.bbdml.Rd
6eea8ef8e7959229bca960ff76de16aa *man/print.differentialTest.Rd
4390e43ce006e21cd090e7cc481cfaa4 *man/print.summary.bbdml.Rd
b1a2a9c83df784d1715e18fff8871476 *man/qbetabinom.Rd
a5b812393b07832c6f1084d89876d0ce *man/sandSE.Rd
ae2b4f117e4d32dad9035979bcb07883 *man/score.Rd
f9489aa5e55c5e95b74802931b78e590 *man/simulate.bbdml.Rd
b24c6d6ccb60fd9508c0e0f8f305bdc1 *man/soil_phylo.Rd
75b66b760d14886f94b0bee783fb498c *man/soil_phylum_small.Rd
515edc473d5c08703e85f0e9b06c2c37 *man/summary.bbdml.Rd
bd2fa0005062fdae7782ee9d7bba5196 *man/waldchisq.Rd
4a0448370dfd66c846a47d36a8894470 *man/waldchisq_test.Rd
7c9702874ed45ccc8548abcb09a1401e *man/waldt.Rd
07cb4487b3ba80cdd0a418ce649d1ea4 *tests/testthat.R
e4fab8ad97f83766e2cbf72b9465e0fe *tests/testthat/test_bbdml.R
acfee88cb6dde714aff8ee5c608fe2c0 *tests/testthat/test_cleantaxanames.R
f72eaf9cec22a74cd6633741990d4a81 *tests/testthat/test_differentialTest.R
4d8b9fa9f50d2d23ae736fad50d70c01 *tests/testthat/test_genInits.R
df4af66bd2ef4d1b339fab60c5cd93cb *tests/testthat/test_getRestrictionTerms.R
4813122edf106bae67e18969c9a79a05 *tests/testthat/test_links.R
b0188ac22e938b072b0d7dfe32d93002 *tests/testthat/test_lrtest.R
573d8e85f69512bc8ba6395948e20198 *tests/testthat/test_objfun.R
d1c9e35172b784edf488818134781f0f *tests/testthat/test_pb.R
878459650c5858e1936aa377bdef3256 *tests/testthat/test_qbetabinom.R
5d024397ef40d61d114804258e202f47 *tests/testthat/test_s3.R
c3049db3ec8d4b931a84e147e974a246 *tests/testthat/test_sandwich.R
699bc3243b682f1d0bb4873428f8f2fa *tests/testthat/test_scorehessian.R
645974adde92adb1b0e8e6dff9767028 *tests/testthat/test_simulate.R
691d44cc89ec8c27f9696e496b0e8616 *tests/testthat/test_waldtest.R
28cfa4371a37a0ea11bc4b8dd96d4fa4 *vignettes/corncob-intro.pdf.asis
3961e12e635cb21793e809f943604e54 *vignettes/logo.png
