e3a612ee0b35b29b3bac4ea48d3708fc *DESCRIPTION
e9cdaea97ca49337100b98e314107340 *NAMESPACE
614aba8613d3c1c7d8c20fe073b6a019 *R/deisotoper.R
0705ac78c1ff40160415363c07fda193 *R/onAttach.R
fa8424676cc1054dc73353200be088b3 *R/onLoad.R
d09fb3131ce0a7014e6677588a709547 *README.md
b1e01b26bacfc2232046c90a330332b3 *inst/java/LICENSE-AL.txt
1cfd54eaf35531cd95ba056ddbc536ea *inst/java/LICENSE-EPL.txt
e7ee7901838fed86cdcd56a84eb2df07 *inst/java/LICENSE-LGPL.txt
d612f2ef67e71699ee83a28f69c19e2b *inst/java/LICENSE-README.txt
ecf48497bea9dcd1b0420048bb120535 *inst/java/deisotoper-1.0-SNAPSHOT.jar
e15075deb1b60f5951d017ee85456356 *inst/java/jgrapht-core-1.0.1.jar
27c0a383a81b13f59154b0ccda54fe14 *java/Makefile
11720ee963b2a2220dfb575ed744025e *java/deisotoper/deisotoper.iml
f8378ff81948d8657d70db0d2d4ddc32 *java/deisotoper/pom.xml
808a2ee5b7165322559caca2e2743163 *java/deisotoper/src/main/java/ch/fgcz/proteomics/R/FeaturesBasedDeisotoping.java
d004d5568eba43098e0af7e5013eca8b *java/deisotoper/src/main/java/ch/fgcz/proteomics/R/Utilities.java
8f97a912a879d678ae01ccaba09c92b7 *java/deisotoper/src/main/java/ch/fgcz/proteomics/Version.java
7a204e9e7e8cbd1176fceac281d3afe2 *java/deisotoper/src/main/java/ch/fgcz/proteomics/dto/MassSpectrometryMeasurement.java
5104de38ee44228ca1e86e71ddaed984 *java/deisotoper/src/main/java/ch/fgcz/proteomics/dto/MassSpectrum.java
f9e8e1647104dcf20a19ef20e54d351f *java/deisotoper/src/main/java/ch/fgcz/proteomics/fbdm/Configuration.java
5bd58f92632fa3a0391899e60222796a *java/deisotoper/src/main/java/ch/fgcz/proteomics/fbdm/Connection.java
cfe8e412a4db116007525f340f08a2c3 *java/deisotoper/src/main/java/ch/fgcz/proteomics/fbdm/Deisotoper.java
4032bceed4a84fdb112bc6ec4a82e253 *java/deisotoper/src/main/java/ch/fgcz/proteomics/fbdm/IsotopicCluster.java
a95751622acfc0c83ee2ca504b331d82 *java/deisotoper/src/main/java/ch/fgcz/proteomics/fbdm/IsotopicClusterGraph.java
d39d68cbad1eeccf284f977473a7bdf2 *java/deisotoper/src/main/java/ch/fgcz/proteomics/fbdm/IsotopicSet.java
95efbb53922764d431df7b68880012fe *java/deisotoper/src/main/java/ch/fgcz/proteomics/fbdm/Peak.java
f8286b2aab7e034b608b0aa005a5ed57 *java/deisotoper/src/main/java/ch/fgcz/proteomics/fbdm/PeakList.java
3e74706ae00697c6b8e0a1b5175dc51f *java/deisotoper/src/main/java/ch/fgcz/proteomics/fbdm/Score.java
006c7b7e4edaeaf9e46177201c0f75e7 *java/deisotoper/src/main/java/ch/fgcz/proteomics/fbdm/ScoreFive.java
b0db6df13bffd9066be23a5e692f5fe0 *java/deisotoper/src/main/java/ch/fgcz/proteomics/mgf/ReadMGF.java
38668ff0170416f82fed42b4f85345c5 *java/deisotoper/src/main/java/ch/fgcz/proteomics/mgf/ReadStdIn.java
3f6d2f36473b252391497699f6b234a5 *java/deisotoper/src/main/java/ch/fgcz/proteomics/mgf/WriteMGF.java
7614f3109477b3931e0980178f6342f3 *java/deisotoper/src/main/java/ch/fgcz/proteomics/mgf/WriteStdOut.java
181148693692d8d3912f87ee350f15a4 *java/deisotoper/src/main/java/ch/fgcz/proteomics/mspy/Convert.java
f8adea3e1f35730ae1e45be21a055ace *java/deisotoper/src/main/java/ch/fgcz/proteomics/mspy/Deisotoper.java
565c411fa9ae3c7b331b2b439fb1a07e *java/deisotoper/src/main/java/ch/fgcz/proteomics/mspy/Mspy.java
883f8337b7ac03f36b91f5af6bbf22e8 *java/deisotoper/src/main/java/ch/fgcz/proteomics/mspy/Peak.java
f32843114fdfd513c9bea8a6605738a7 *java/deisotoper/src/main/java/ch/fgcz/proteomics/mspy/Peaklist.java
0f7d8b30e95d6a496803b40825e88023 *java/deisotoper/src/main/java/ch/fgcz/proteomics/utilities/FindNearestNeighbor.java
c0b91dfdc5ea1f3affb2befc768d7bf9 *java/deisotoper/src/test/java/ch/fgcz/proteomics/R/TestFeaturesBasedDeisotoping.java
7bdf263fcd85e0bf16b668604fc32cce *java/deisotoper/src/test/java/ch/fgcz/proteomics/R/TestUtilities.java
844805ce61b87118fd7321cb0df9fe04 *java/deisotoper/src/test/java/ch/fgcz/proteomics/dto/TestMassSpectrometryMeasurement.java
c388614953b7617ecc4c03a445f93f28 *java/deisotoper/src/test/java/ch/fgcz/proteomics/fbdm/TestConfiguration.java
dc0b92c2da53478ad8873403baa08983 *java/deisotoper/src/test/java/ch/fgcz/proteomics/fbdm/TestDeisotoper.java
7c1a5bd007830b6870c2e69fb8a11851 *java/deisotoper/src/test/java/ch/fgcz/proteomics/fbdm/TestIsotopicCluster.java
878174058828af6bdc8e0176016b0fe5 *java/deisotoper/src/test/java/ch/fgcz/proteomics/fbdm/TestIsotopicSet.java
a8d78f3d5c258bacb149626810c84cbf *java/deisotoper/src/test/java/ch/fgcz/proteomics/fbdm/TestScore.java
9aee20eadecd4b6e0b119d01346e5396 *java/deisotoper/src/test/java/ch/fgcz/proteomics/mspy/TestMspy.java
5202dbdeee0199b97b46850fb5ad29ed *man/deisotope.Rd
c6e7dc6f37ee04b1a1221198765e403f *man/deisotoper.Rd
1488efbc9ae94d4e98d5092bd7eccc4a *man/findNN.Rd
ddee421c28c824590a41eca79a4e2b8c *tests/testthat.R
32bca071bac3f42df1f3766c09cfa616 *tests/testthat/test-deisotoper.R
5befd070bdbf124eb39a03fbf013ce4f *tests/testthat/test-findNN.R
