d4a1fd266a6815493ad5b4601f9d357a *CHANGELOG
94c8b6c21f444a935198c4947ed5b628 *DESCRIPTION
718daba6826dd9e46c2c0fb31e0c4bea *NAMESPACE
ebf2e72b8aed6bcbb67921b1caa41651 *R/AUCtest.R
af7452259630a7863e3994d71a3ea591 *R/BioradCNV.R
b00da4b4def7af68d524fe8772d7b818 *R/White.R
0a484113de601f14c691c9fdca2e6fd9 *R/adpcr2panel.R
a29350e38d2d0ebf7ac1d01ef394b2f4 *R/adpcr2ppp.R
93cbc30fc317a1b8e11b661d2824f4c1 *R/analyze_pooled.R
94481552c5ebb0fc0300e97a103bf12c *R/binarize.R
4584d1c84ea02ac9d20bcf84cdc2530f *R/bind_dpcr.R
e0fe138fb3e5c8d278ca5fd9b3e0680b *R/bioamp.R
f6876cd9d4c93af6781947f44b3caafa *R/calc_breaks.R
521323d08200e3946e7ea052b0c7c2b7 *R/calc_coordinates.R
b0d0bf30306f657246057d4388b1c68e *R/calc_lambda.R
1513f8ce56da35405ec6d42e237bfda7 *R/classes.R
56226fd277ef4d882106a6e1187cd7b8 *R/compare_dens.R
ab88fd9a8156406b85f78f731132f796 *R/count_test-class.R
e254f4d579e8faeefb26bc2bb7d7038b *R/create_dpcr.R
f55ccc893a00730f52899053bb464149 *R/dPCRmethyl.R
209c5f8a62ade516a61752001a4d8fca *R/dpcR-package.R
327e2cd87fb00ab8c5098b35675cb551 *R/dpcReport_gui.R
f869aeda12be0db6eb5c819549307154 *R/dpcr_calculator.R
764e827d83aa73aa3c28576064455178 *R/dpcr_density.R
8c38292978c7f3f635974db3e6cbf3c9 *R/dpcr_density_gui.R
6e3d38f9b38ef1a5e7297f3e33eacdbc *R/dpcr_density_table.R
2b2813162eaf6b97c2ec5a8013fcc44f *R/extract_dpcr.R
5b43a89a57606b0a312cce643d02ccd9 *R/fit_adpcr.R
eafd8d4671c515d4f7dcea744e69bce8 *R/fl.R
b36ae2d14f8496a07fa1fd5bf978de4d *R/get_k_n.R
ac3df9cfb3b17e330f90c77a72376049 *R/limit_cq.R
1e16ad3d5602ca62a61f1a379d94849d *R/many_peaks.R
8748c266dc810c11bff08c1fdc2ec95e *R/modlist.R
d263c8208777075ad4c9a0da5f42b097 *R/moments.R
90f30aa599b492a28116f3f4787f36eb *R/num2int.R
3477c30bb02fcfa5847dcf34574cd72b *R/pds.R
76b1448d9d4f7f318821d8076ffa7249 *R/pds_raw.R
ab7ca4c4bc3a97aea693682c96e92bb9 *R/plot_distr.R
0174bbfe9a9b7a35c3104992d3e3be2f *R/plot_panel.R
19603be583a1a776ccb4ed88d774d233 *R/plot_vf_circ.R
4a48579917dd409943b9db7f0f910dde *R/plot_vic_fam.R
b8af420259e74307bcb6ddbb606b8929 *R/print_summary.R
eeab27f0a8c80fc7879600b2b0300847 *R/qdpcr.R
cc12882f47d03ab138c8815f351f6d9f *R/qpcr2pp.R
fa35bf7e73acc1f1ac4547603ae1c456 *R/qpcr_analyser.R
eca20b1d373ca334cdc8d77004c8734e *R/read_dpcr.R
040ba0861906bd14afc7f0f97af5eb05 *R/rename_dpcr.R
a1a6ab264c6361b54631717968795508 *R/rtadpcr.R
18448a910dec20a20b040b28d237c57d *R/safe_efficiency.R
400c0cc0997c55a45d7263c3c05b6f09 *R/show_dpcr.R
2259d42c9e45249f272128968bf6238e *R/sim_adpcr.R
2473a565ea3f5b8bfe67acfae399a2c7 *R/sim_ddpcr.R
3425831227a2b0f6c4108921744611fa *R/sim_ddpcr_bkm.R
f40770a97f461eef131667f06a7e061f *R/simulations.R
1ff8438a047d3b2f3afbdaf2fb883d71 *R/six_panels.R
b5303dc82aafa188b8e285982a7b3a3f *R/summary_dpcr.R
48260fccc0c2cb90d14e8264439cb8fd *R/test_counts.R
2b19081980f53413cce6c354c19793ff *R/test_counts_gui.R
18e93c2ebc438003c57dcba925926ff5 *R/test_panel.R
2a3d6e38d16d83c7b44e69665f6bb6bc *R/test_peaks.R
ac97543297e1a680ed471207b940f4d6 *R/test_ratio.R
7edd145b34d2e4e0b78dc39ada806e5e *R/valid_amp.R
3d5a24ea97538747c9982e3fbfd02b54 *R/y_val_conf.R
8184f18f4ebc24794cd617f38f3bb397 *README.md
385286cdf89908e217d9b68802de1b84 *build/vignette.rds
7b2ef8b10a52a49c8119f285f0f64818 *data/BioradCNV.rda
30810250c267910d5cd1bc324eca1f23 *data/White.rda
7cab5064e7a0c98265be818cfaf13f54 *data/dPCRmethyl.rda
d2189892806c94f867271cb44e42fa49 *data/datalist
b70bd2acb5763b1b675208453fce807b *data/many_peaks.rda
487be66d297e926ac12e482eb4881e7f *data/pds.rda
b7b7c01a3649c6301f11acbfecca4edb *data/pds_raw.rda
1792bc167e4d1831fa318a2b8e4b8ee4 *data/six_panels.rda
3b467b5840fbfb07fff28777381b68d9 *inst/CITATION
0eb88947a674788ea5a817996e03a6c2 *inst/doc/overview.R
344c1e3ed93f0b88d4ac1d82a4479815 *inst/doc/overview.Rmd
500e7b4e3036efeb863bd4682122d5ea *inst/doc/overview.html
f906c51baa0c6045897a06778ddbfb6e *inst/dpcReport/about.Rmd
25caae2e0359a68c701aa2f0024b6ac7 *inst/dpcReport/about.md
7846ef85dedf846667fe7e339716597e *inst/dpcReport/data_summary/data_summary_table1.md
045cb1044343836545d4134b89545533 *inst/dpcReport/data_summary/summary_input.R
ecc9c5585ce9c1e938086fd0ec84eaa0 *inst/dpcReport/download_report1.md
77bc47606cb3d426bff1968b566a4506 *inst/dpcReport/dpcR_logo.png
8692a786359faf531b7b9c5b43f3bf23 *inst/dpcReport/dpcr.bib
964ab82e5a3a7df54e1577f05578c665 *inst/dpcReport/input_file1.md
a51c113b07c62434678916d2affa4c2a *inst/dpcReport/input_file2.md
cbc98f13cf00fb75ab6631a2cacff5b9 *inst/dpcReport/plot_panel/plot_panel.R
6532dc3d73971f1596be96c83fa64350 *inst/dpcReport/plot_panel/plot_panel0.md
d1693a8b49981a58585447fb38b52191 *inst/dpcReport/plot_panel/plot_panel1.md
c85c0371368d57c18e01d4f1e885a88f *inst/dpcReport/plot_panel/plot_panel2.md
371c53ce318760c494f6cab16ad83cbc *inst/dpcReport/plot_panel/subpanel_summary.R
8992468c9e1a831fb25e328b67dd1f3d *inst/dpcReport/plot_panel/test_panel.R
5015218e68b8823c8596f9acc902822b *inst/dpcReport/prob_distr/get_kn.R
4e1b226e97fd3873338a23df98a002fb *inst/dpcReport/prob_distr/plot_density.R
482c49233b79798d06c56fcff2c27721 *inst/dpcReport/prob_distr/prob_distr1.md
40f7ddb271133f44232a35aab94184d5 *inst/dpcReport/prob_distr/prob_distr2.md
3073903cfc4b38fffe80e602be0de48d *inst/dpcReport/prob_distr/prob_distr3.md
c1969e94159071fc0667a1c191f401ed *inst/dpcReport/prob_distr/prob_distr4.md
86aa215a962f3ac9bafc36349e255e47 *inst/dpcReport/prob_distr/single_run_moments.R
ad9dae0965ba26393fde11db603cdda4 *inst/dpcReport/r_code_gen.R
6c420ff0aeb29a3790c0141c01e3396b *inst/dpcReport/report.css
16523a57174a9a5533e18d3f6008693a *inst/dpcReport/report_template.Rmd
c7aedb21da6fe6ec83ed317b384f624c *inst/dpcReport/server.R
2b06b00f4e3752c18ad6b206671d19a5 *inst/dpcReport/server_data.R
2082f1afe9be099271e4fe2865a770d7 *inst/dpcReport/summary_plots/data_summary_scatterchart1.md
a76096c42bd57e73419e92bfc0dd99fa *inst/dpcReport/summary_plots/data_summary_scatterchart2.md
491baa1c6c6fb5b6e8db5174b0f540a7 *inst/dpcReport/summary_plots/summary_exprep_plot.R
20c4503988f9cca274d9e523706100d6 *inst/dpcReport/summary_plots/summary_plot.R
1b97a0e65fdb3140beadd9b3d6937c5e *inst/dpcReport/test_counts/test_counts1.md
75b8489cb9b2740f6055a41daa4bdf6a *inst/dpcReport/test_counts/test_counts2.md
c3386940b46cd431da7dc72d3575a57b *inst/dpcReport/test_counts/test_counts3.md
921df198d0fdf15e0d6305976feb9b16 *inst/dpcReport/test_counts/test_counts_group.R
2da3b4bf652b7986d09dc6d8a3647850 *inst/dpcReport/test_counts/test_counts_plot.R
9bc4475ea02df5047742185947a80001 *inst/dpcReport/test_counts/test_counts_res.R
021ebb457230e93526dce113f31333a5 *inst/dpcReport/ui.R
77d27b2f24554fb621204099c41b0390 *inst/dpcReport/www/copy_csv_xls.swf
1b27641ce11f7b258bbbcceb11fa6b43 *inst/dpcr_density_gui/server.R
75f15e9879664504960909db9d45a7a7 *inst/dpcr_density_gui/ui.R
06a2b843dd3137e7f1c5837a2e67beae *inst/test_counts_gui/readme.md
32a725b32330afbc6cdf4200fa856920 *inst/test_counts_gui/server.R
39bacd7cdf4565da21120191551cc38e *inst/test_counts_gui/ui.R
eee2c8353ba4de5178b4e1786edb5b3a *man/BioradCNV.Rd
60560905dd0b98c304e0570f44607eb8 *man/White.Rd
295ebe937bcf28e18c7c33e1b66463d8 *man/adpcr-class.Rd
fa185d17611c9cdeb936b66b908e4139 *man/adpcr2panel.Rd
01b29641dd751834b5a8ba3de68b76cf *man/adpcr2ppp.Rd
e68ce55c7e429da644b51fbb006d0dc3 *man/analyze_pooled.Rd
9a9e0271cd94a1245b3c1b571cbef4df *man/binarize.Rd
853952db6114bda92b98fc1bd4501c6b *man/bind_dpcr-methods.Rd
07c3ca8ee97971532174cdf1e24226f8 *man/bioamp.Rd
cce1d8c5d92f1ad51126a4fa99ef646c *man/calc_coordinates.Rd
106c69b62eeffcdb219a995ece732496 *man/compare_dens.Rd
222182aec29ea7fb36a1ec14e1771218 *man/count_test-class.Rd
55025e76aa82fe298b541ffb815715e8 *man/create_dpcr.Rd
4a99338079fb8dc7ba8a72ced381f666 *man/dPCRmethyl.Rd
3f11eb94506eb3685077399a532e6aef *man/ddpcr-class.Rd
cfe14f9abb35ab8fd0ab02e5df91d2f3 *man/dpcR-package.Rd
456e564e1ece9bee82520dc07bfa0e4d *man/dpcReport.Rd
3d22873475d7bf6cefe8d05a3c0e6e3d *man/dpcr-class.Rd
c7a58d7760c6e95c99021a13d141a0f6 *man/dpcr_density.Rd
422e98ae71224cb003f7dccf5e81e206 *man/dpcr_density_gui.Rd
be44310b0f71cb1b79dea0780cf1b247 *man/dpcr_density_table.Rd
081e799a795aebe35f723a224d65ffd3 *man/extract_dpcr.Rd
82171e199032cd687854774d69b05e56 *man/limit_cq.Rd
8bcf5f8ad243edcf27030d365005a606 *man/many_peaks.Rd
93a472a0708d66edeaf5475c685895cb *man/moments-methods.Rd
acff6458ca5e3ac9ca2a11619306c447 *man/num2int.Rd
3a8549a1cbd57b37471c4fc9a93576cb *man/pds.Rd
ad0bd853866439e1c168872c25f92503 *man/pds_raw.Rd
6559071a2ac77e8b9d733127800a3012 *man/plot.qdpcr.Rd
cefb6a0e8f60d26661aeedef54b2b729 *man/plot_panel.Rd
19bf8c120a9989279ae32c5697fac8ad *man/plot_vic_fam.Rd
e248404a301363731079b9c839d55546 *man/qdpcr-class.Rd
dd47c22f5bf46035d2ce7ad3ca29e392 *man/qpcr2pp.Rd
74e94f140c46974c9be617ea98f4ca9e *man/qpcr_analyser.Rd
2dbf9725c7ab125e2a461ceaeaae5dcb *man/read_BioMark.Rd
ea6a19cc761b64e4a15a4c9d426f94d2 *man/read_QX100.Rd
6f5c3f902a97de0e207dc2534fd5e621 *man/read_dpcr.Rd
a6c0f4d77810b9fb91a4650f2ae287fa *man/read_raw.Rd
ea2e9692806180a252ead95878ee6c24 *man/rename_dpcr.Rd
de741042e86df32584fe51ac0220df22 *man/rtadpcr-class.Rd
1fbd4b1993488b6ddc9eeb3512c212d6 *man/show-methods.Rd
580ffc8209d7938b23ba79ae7a848cbf *man/sim_adpcr.Rd
62311b0b043c13db4f1eac5c0d48d035 *man/sim_ddpcr.Rd
4f669880ae3123cf867c6c9e2a6623fb *man/six_panels.Rd
25c9c87c7fbd3721d1d6d632f8f59cc8 *man/summary-methods.Rd
926fff742ceaaf3d0f897e5f8d7468ab *man/test_counts.Rd
8657ddd062fa48cb3256e3291bccfe02 *man/test_counts_gui.Rd
c6093d914cf7b37e28bbe18c15d378c5 *man/test_panel.Rd
1cc4ea8a21faeef7df8f88a04b33bd95 *man/test_peaks.Rd
3defb0968037a0269facd21dea3f0a29 *man/test_ratio.Rd
043e23d9df7ebe35c01e6542220c1fd8 *vignettes/adpcr_comp.RData
9e10c40379213c41184dc7c6238b375e *vignettes/coverage_poster.RData
77bc47606cb3d426bff1968b566a4506 *vignettes/dpcR_logo.png
79d9f9f1b0d5c3dce8f44091800b81b6 *vignettes/dpcr.bib
344c1e3ed93f0b88d4ac1d82a4479815 *vignettes/overview.Rmd
63294f3d58e0bcbeaad443e15ada8c19 *vignettes/vig.RData
