ac11b8a751dd63ab2e9a9dae161baeaf *DESCRIPTION
d7621cd8b19f7a60463ac9645dc1f50c *LICENSE
f53147eae7f092bba9b2633568a98768 *NAMESPACE
f40e3e12a7f43276e40e32a90f7e1072 *NEWS.md
dcb524e84f2fa1e59beeb5bf4f6f0b0b *R/RcppExports.R
ad6cbcdf080286eb3b7fa7994f2a1ff5 *R/betabinom.R
0d11e2cfbd4bc9a63e9924388dfe7d8d *R/data.R
28f247aca68f9beaaf6d392fdd3aa43e *R/distr-fitting.R
f58b95938c70c46a14d44bbee126aad8 *R/epiphy.R
6e246d7f55cde8e87b18d98be9053776 *R/indices.R
31a656cc871dc69cf23e7cc4f9a483f0 *R/intensity-classes.R
15a18200302898edc73fa74a07467b24 *R/mapcomp.R
329f1d8208a5c1877459ad789600419b *R/mle-factory.R
c2fabb0dab6725a51a8455793ed59f46 *R/power-law.R
28a0be9a4cc43caa10606787bb396a35 *R/sadie.R
07ba4a313c3e861bcd08d5118765b00c *R/spatial-hier.R
81aa76bda186c2c093df2b83b30ed4ad *R/utils.R
b901c6a7de00ee37550f17bdbac3523b *README.md
b913ec8b444d80df0ab5ac17049ef41c *build/vignette.rds
ab8a6938fd43641e437192779429cbc8 *data/aphids.rda
676d7063dbd19969a96f39f725524893 *data/arthropods.rda
9103ca9eddc0729ed496ad4d08d9c6bf *data/citrus_ctv.rda
589bb00939f4608a21bcfbb6c17a9f29 *data/codling_moths.rda
aab51ee0658f02e9fa587cc800f75d17 *data/dogwood_anthracnose.rda
20091b28e064ad70a4fe2ace10d59366 *data/hop_viruses.rda
7fa6aac0ee5927cfd3ccf41ef279b3be *data/offspring_survival.rda
b0a0064df9f616043385ed11dcc55ccb *data/onion_bacterial_blight.rda
67ab576082cc15179d210d73ea133bf4 *data/pyrethrum_ray_blight.rda
c0c23887210aac3e59b48e48b471ca84 *data/simulated_epidemics.rda
6ac9f1da47f10133a58e25c9cb47120c *data/tobacco_viruses.rda
07045462bafd098cb19485f9922c7407 *data/tomato_tswv.rda
7d047ec963e63cb961285d8d9a1bbb24 *inst/doc/defs-and-eqns.Rmd
37f97e1a0d62ce339a3ca112472d2e69 *inst/doc/defs-and-eqns.html
768932405b9f8b7fd2a78950339331da *inst/doc/epiphy.R
03e09b27971516177f3c71005d5f8ec8 *inst/doc/epiphy.Rmd
8ad8ffce905bc8054ad9538ced29ff52 *inst/doc/epiphy.html
2a607a6a0bf1a822ba1aa96fd4d5c001 *man/BetaBinomial.Rd
9c36627a29e7fb548c580ad0648dc794 *man/a2a.Rd
9be9b7263432207e61496e2e23ee9d61 *man/agg_index.Rd
566ba8b69dab8b4f2334ae26dc853fa1 *man/aphids.Rd
bbfbab25c69c8dc1f52537cd2b4df75a *man/arthropods.Rd
d9f9d890e98ef4baa88d6a74929bfa44 *man/as.data.frame.intensity.Rd
dfe41207a9b3c4f5c7c70bf24625881c *man/calpha.test.Rd
3996a8bb0bd203ac348aa9232b2a1fcb *man/chisq.test.Rd
ed6074e5f98c64a739dd086209486c9e *man/citrus_ctv.Rd
edaca5dd93af78e9886039601651219f *man/clump.Rd
be27e5fc7bf6cb0c8739fde531006f3e *man/codling_moths.Rd
0ea1e9b8012e79e0d49129d2b03b1cf6 *man/coef.smle.Rd
6750f0521af5961cf65bfc941c1831b8 *man/dogwood_anthracnose.Rd
8051d16092a70e96973638c516cd7f93 *man/epiphy.Rd
38648a9cfd08e94387317f29850c1648 *man/figures/logo.png
b1cb705f8b939e46c51e3cb88f907466 *man/fit_two_distr.Rd
31092661494165f6c42245a3906632a5 *man/hop_viruses.Rd
4ad3a41622b5746a6798eae38ff01810 *man/indAndSub.Rd
67bcd19914d657413b65f43e522bf494 *man/intensity.Rd
4402bb5fb2d60b50e7c4dc6519ff5a4b *man/is.intensity.Rd
5b7eae9cc048dcede54773df24b5ddd7 *man/link.Rd
42979be8e4a1d7d05c8fddcbd98b4e08 *man/logLik.smle.Rd
a26c2be539927fe662b4da11f788bede *man/mapcomp.Rd
94f8c178053d943743080486b6b180bf *man/mapped_var.Rd
c94be53beac979f2848b81dba6cb2e7f *man/mapping.Rd
949791c1aef40559386aab5f9c913c15 *man/offspring_survival.Rd
0cc0454474859dfb1c48103a3413e21a *man/onion_bacterial_blight.Rd
e6a61a3ab8e61008a4bbe593f1b5a3e0 *man/power_law.Rd
6a808f702fc6c1beeaa70ccc7319ba58 *man/pyrethrum_ray_blight.Rd
23c6fcb2dfa48034f86c9a885114efd2 *man/sadie.Rd
14fb771c3a6299db697bc10d37ee33ca *man/simulated_epidemics.Rd
7028d8c35da3dd94a8d4e35babe17792 *man/smle.Rd
468927f145f5cfdd9ec9b53ad036a271 *man/smle_wrappers.Rd
c8d7083e9a5ed449581d3f309ae17e31 *man/spatial_hier.Rd
e9cc8e92c3f37292e242d09c984cce0b *man/split.intensity.Rd
cbad21fe69f9e8ce4a41a2960bb079d4 *man/threshold.Rd
8987ad3bf0ae06a09838f7920c97c058 *man/tobacco_viruses.Rd
16e359f0e673e90ce3d4b5657c1e6518 *man/tomato_tswv.Rd
1ba30b536a59cb469b3a4f3a9801b54c *man/vcov.smle.Rd
f4ba4632a834f8cbbd7106070f8c0103 *man/z.test.Rd
38822b912db3982e2f092aa455255e45 *src/RcppExports.cpp
00219d8784dd40447152d0acce0082c7 *src/mapcomp.cpp
08b13978a2aff52011a50dc9be9f2411 *src/sadie.cpp
d41ddc3302d50c4ba3e634558bff5e7f *vignettes/biblio.bib
7d047ec963e63cb961285d8d9a1bbb24 *vignettes/defs-and-eqns.Rmd
03e09b27971516177f3c71005d5f8ec8 *vignettes/epiphy.Rmd
d6b7ea768dca5ec7d2f1604837f039a4 *vignettes/phytopathology_v2.csl
